Multiple sequence alignment - TraesCS6B01G350700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G350700 chr6B 100.000 6681 0 0 1513 8193 615965364 615972044 0.000000e+00 12338
1 TraesCS6B01G350700 chr6B 100.000 1062 0 0 1 1062 615963852 615964913 0.000000e+00 1962
2 TraesCS6B01G350700 chr6D 89.973 4079 257 56 3860 7848 409753502 409757518 0.000000e+00 5127
3 TraesCS6B01G350700 chr6D 86.957 1058 77 30 26 1062 409742449 409743466 0.000000e+00 1133
4 TraesCS6B01G350700 chr6D 92.513 187 11 3 7843 8027 409757656 409757841 1.750000e-66 265
5 TraesCS6B01G350700 chr6D 87.565 193 12 6 8013 8193 409758879 409759071 6.440000e-51 213
6 TraesCS6B01G350700 chr6D 87.634 186 11 3 5302 5487 409755134 409755307 1.080000e-48 206
7 TraesCS6B01G350700 chr6D 83.838 198 25 5 1513 1707 409743461 409743654 1.820000e-41 182
8 TraesCS6B01G350700 chr6D 97.468 79 1 1 3721 3799 409753420 409753497 5.160000e-27 134
9 TraesCS6B01G350700 chr6A 90.444 3066 178 45 4849 7857 555227164 555230171 0.000000e+00 3932
10 TraesCS6B01G350700 chr6A 90.988 1154 59 14 3721 4834 555220578 555221726 0.000000e+00 1513
11 TraesCS6B01G350700 chr6A 83.318 1091 73 45 1 1042 555218621 555219651 0.000000e+00 905
12 TraesCS6B01G350700 chr6A 93.204 206 12 2 7843 8047 555230290 555230494 1.340000e-77 302
13 TraesCS6B01G350700 chr6A 88.587 184 11 2 5302 5485 555227814 555227987 1.790000e-51 215
14 TraesCS6B01G350700 chr6A 87.640 178 16 4 5499 5670 555227620 555227797 1.390000e-47 202
15 TraesCS6B01G350700 chr6A 91.406 128 9 1 1513 1640 555219660 555219785 3.040000e-39 174
16 TraesCS6B01G350700 chr7D 90.550 1672 119 7 2044 3694 469212553 469214206 0.000000e+00 2176
17 TraesCS6B01G350700 chr5A 81.158 1624 195 63 3885 5482 413411162 413412700 0.000000e+00 1201
18 TraesCS6B01G350700 chr5B 81.104 1630 194 64 3885 5485 372108806 372107262 0.000000e+00 1199
19 TraesCS6B01G350700 chr5B 75.885 452 64 22 6839 7269 372105251 372104824 1.090000e-43 189
20 TraesCS6B01G350700 chr5D 80.812 1626 195 65 3885 5485 320892185 320890652 0.000000e+00 1166
21 TraesCS6B01G350700 chr5D 78.492 358 47 14 6839 7190 320888684 320888351 3.000000e-49 207
22 TraesCS6B01G350700 chr7B 95.833 480 14 1 2050 2529 3551680 3551207 0.000000e+00 771
23 TraesCS6B01G350700 chr2D 94.017 117 7 0 2049 2165 433238374 433238258 2.350000e-40 178
24 TraesCS6B01G350700 chr2B 73.373 507 115 13 2051 2552 415928846 415929337 3.930000e-38 171


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G350700 chr6B 615963852 615972044 8192 False 7150.00 12338 100.000000 1 8193 2 chr6B.!!$F1 8192
1 TraesCS6B01G350700 chr6D 409753420 409759071 5651 False 1189.00 5127 91.030600 3721 8193 5 chr6D.!!$F2 4472
2 TraesCS6B01G350700 chr6D 409742449 409743654 1205 False 657.50 1133 85.397500 26 1707 2 chr6D.!!$F1 1681
3 TraesCS6B01G350700 chr6A 555227164 555230494 3330 False 1162.75 3932 89.968750 4849 8047 4 chr6A.!!$F2 3198
4 TraesCS6B01G350700 chr6A 555218621 555221726 3105 False 864.00 1513 88.570667 1 4834 3 chr6A.!!$F1 4833
5 TraesCS6B01G350700 chr7D 469212553 469214206 1653 False 2176.00 2176 90.550000 2044 3694 1 chr7D.!!$F1 1650
6 TraesCS6B01G350700 chr5A 413411162 413412700 1538 False 1201.00 1201 81.158000 3885 5482 1 chr5A.!!$F1 1597
7 TraesCS6B01G350700 chr5B 372104824 372108806 3982 True 694.00 1199 78.494500 3885 7269 2 chr5B.!!$R1 3384
8 TraesCS6B01G350700 chr5D 320888351 320892185 3834 True 686.50 1166 79.652000 3885 7190 2 chr5D.!!$R1 3305

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
897 952 0.478507 GAGAGGAGAGAGGGAGGGAG 59.521 65.0 0.00 0.0 0.00 4.30 F
1707 2073 0.035439 GATTTTGCTGGAGACCCCGA 60.035 55.0 0.00 0.0 37.93 5.14 F
1934 2335 0.038435 CAATGGTGCAATGGCGTCAA 60.038 50.0 0.00 0.0 45.35 3.18 F
2821 3249 0.381089 GATGGAGCACATTCAGCAGC 59.619 55.0 0.00 0.0 40.72 5.25 F
3695 4123 0.108396 TGGCTGCTGTAGTTTCTGCA 59.892 50.0 0.00 0.0 39.29 4.41 F
4564 5069 0.400213 TACACTTGTGAGGGCCAAGG 59.600 55.0 6.18 0.0 42.84 3.61 F
6034 6888 0.031994 AAGCAATTGTTGTGTCGGCC 59.968 50.0 7.40 0.0 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1918 2319 0.243365 GATTTGACGCCATTGCACCA 59.757 50.000 0.00 0.00 37.32 4.17 R
2620 3048 0.313987 GCGACCAAAACAAGGGGAAG 59.686 55.000 0.00 0.00 0.00 3.46 R
2861 3289 0.538118 ATGCAATTGAATTGGCGGCT 59.462 45.000 18.52 0.00 40.57 5.52 R
4724 5249 0.508641 CTTGTCGACTTTGTGCGAGG 59.491 55.000 17.92 0.00 37.18 4.63 R
4752 5277 1.072965 ACCCAGAGTTCAAGCCTTCAG 59.927 52.381 0.00 0.00 0.00 3.02 R
6480 7892 0.392461 GGCAGGCTGAACGGTTATCA 60.392 55.000 20.86 0.00 0.00 2.15 R
7532 9356 0.436531 GCGAGCACAAGAAAGTCTCG 59.563 55.000 5.69 5.69 46.44 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.641437 TTTGCTCCGGTTTCTTGATTG 57.359 42.857 0.00 0.00 0.00 2.67
22 23 2.559698 TGCTCCGGTTTCTTGATTGA 57.440 45.000 0.00 0.00 0.00 2.57
94 98 2.420890 CCTGAGCATCTCCGCCTC 59.579 66.667 0.00 0.00 34.92 4.70
151 155 3.053896 CGGTTTCCTGCGGAACCC 61.054 66.667 11.94 11.94 41.87 4.11
154 158 1.228154 GTTTCCTGCGGAACCCTGT 60.228 57.895 9.15 0.00 41.87 4.00
270 279 5.234543 GCTACGAGAATCCAGTAAAATCCAC 59.765 44.000 0.00 0.00 0.00 4.02
271 280 5.422214 ACGAGAATCCAGTAAAATCCACT 57.578 39.130 0.00 0.00 0.00 4.00
318 329 6.510746 AGATAAAAGTTTTGCTTTCAACGC 57.489 33.333 11.18 0.00 45.91 4.84
319 330 6.273071 AGATAAAAGTTTTGCTTTCAACGCT 58.727 32.000 11.18 0.00 45.91 5.07
320 331 7.422399 AGATAAAAGTTTTGCTTTCAACGCTA 58.578 30.769 11.18 0.00 45.91 4.26
343 354 3.328237 ACGCGGTAGAAACAAAAGTTG 57.672 42.857 12.47 0.00 0.00 3.16
437 448 1.347062 TTGCCCCTTTTCATTCCCAC 58.653 50.000 0.00 0.00 0.00 4.61
465 480 1.455217 TACTCCTGTAGCTCCCGCC 60.455 63.158 0.00 0.00 36.60 6.13
492 507 3.983420 CCCACCCACCCACATGCT 61.983 66.667 0.00 0.00 0.00 3.79
493 508 2.611505 CCCACCCACCCACATGCTA 61.612 63.158 0.00 0.00 0.00 3.49
496 511 2.124151 CCCACCCACATGCTAGGC 60.124 66.667 0.00 0.00 0.00 3.93
498 513 2.676608 CACCCACATGCTAGGCCA 59.323 61.111 5.01 0.00 0.00 5.36
632 658 2.811317 GCGCCTCTCTTCCACACG 60.811 66.667 0.00 0.00 0.00 4.49
640 666 1.278172 CTCTTCCACACGCACGAGTG 61.278 60.000 12.72 12.72 46.83 3.51
755 792 2.296943 ACTCTACCCCCTCTCTCTCT 57.703 55.000 0.00 0.00 0.00 3.10
756 793 2.132686 ACTCTACCCCCTCTCTCTCTC 58.867 57.143 0.00 0.00 0.00 3.20
757 794 2.294263 ACTCTACCCCCTCTCTCTCTCT 60.294 54.545 0.00 0.00 0.00 3.10
758 795 2.372172 CTCTACCCCCTCTCTCTCTCTC 59.628 59.091 0.00 0.00 0.00 3.20
759 796 2.021441 TCTACCCCCTCTCTCTCTCTCT 60.021 54.545 0.00 0.00 0.00 3.10
760 797 1.222567 ACCCCCTCTCTCTCTCTCTC 58.777 60.000 0.00 0.00 0.00 3.20
761 798 1.275002 ACCCCCTCTCTCTCTCTCTCT 60.275 57.143 0.00 0.00 0.00 3.10
762 799 1.421646 CCCCCTCTCTCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
763 800 2.126882 CCCCTCTCTCTCTCTCTCTCA 58.873 57.143 0.00 0.00 0.00 3.27
764 801 2.158755 CCCCTCTCTCTCTCTCTCTCAC 60.159 59.091 0.00 0.00 0.00 3.51
765 802 2.774234 CCCTCTCTCTCTCTCTCTCACT 59.226 54.545 0.00 0.00 0.00 3.41
766 803 3.181461 CCCTCTCTCTCTCTCTCTCACTC 60.181 56.522 0.00 0.00 0.00 3.51
783 820 1.203523 ACTCACTCTCACTCGCCATTC 59.796 52.381 0.00 0.00 0.00 2.67
897 952 0.478507 GAGAGGAGAGAGGGAGGGAG 59.521 65.000 0.00 0.00 0.00 4.30
898 953 0.998945 AGAGGAGAGAGGGAGGGAGG 60.999 65.000 0.00 0.00 0.00 4.30
899 954 2.018086 AGGAGAGAGGGAGGGAGGG 61.018 68.421 0.00 0.00 0.00 4.30
900 955 2.015726 GGAGAGAGGGAGGGAGGGA 61.016 68.421 0.00 0.00 0.00 4.20
917 972 0.814812 GGAGAGATCTTGCTGCTGCC 60.815 60.000 13.47 0.00 38.71 4.85
920 975 3.129502 GATCTTGCTGCTGCCGCA 61.130 61.111 14.86 14.86 45.60 5.69
933 988 3.869272 CCGCAGTGCCGCTTCATC 61.869 66.667 10.11 0.00 0.00 2.92
934 989 2.816958 CGCAGTGCCGCTTCATCT 60.817 61.111 10.11 0.00 0.00 2.90
1057 1127 4.711949 CGGGCTTGCAGGAGCTGT 62.712 66.667 10.12 0.00 42.32 4.40
1058 1128 2.282745 GGGCTTGCAGGAGCTGTT 60.283 61.111 10.12 0.00 42.32 3.16
1059 1129 2.338785 GGGCTTGCAGGAGCTGTTC 61.339 63.158 10.12 0.00 42.32 3.18
1604 1674 3.918220 GCGCGCCAAGACGATCAG 61.918 66.667 23.24 0.00 34.06 2.90
1607 1677 2.456119 GCGCCAAGACGATCAGGTG 61.456 63.158 0.00 0.00 34.06 4.00
1608 1678 2.456119 CGCCAAGACGATCAGGTGC 61.456 63.158 0.00 0.00 34.06 5.01
1610 1680 2.456119 CCAAGACGATCAGGTGCGC 61.456 63.158 0.00 0.00 0.00 6.09
1611 1681 1.737735 CAAGACGATCAGGTGCGCA 60.738 57.895 5.66 5.66 0.00 6.09
1640 1710 0.536460 TGGGCTCCCGTTTCTTTGAC 60.536 55.000 0.00 0.00 39.42 3.18
1642 1712 1.157585 GGCTCCCGTTTCTTTGACTC 58.842 55.000 0.00 0.00 0.00 3.36
1645 1715 2.224314 GCTCCCGTTTCTTTGACTCTTG 59.776 50.000 0.00 0.00 0.00 3.02
1646 1716 2.218603 TCCCGTTTCTTTGACTCTTGC 58.781 47.619 0.00 0.00 0.00 4.01
1650 1723 1.266989 GTTTCTTTGACTCTTGCGGGG 59.733 52.381 0.00 0.00 0.00 5.73
1652 1725 1.073199 CTTTGACTCTTGCGGGGGT 59.927 57.895 0.00 0.00 0.00 4.95
1692 2054 2.626467 GGGGTGGGCTCCAGGATTT 61.626 63.158 0.00 0.00 34.61 2.17
1695 2061 1.607801 GGTGGGCTCCAGGATTTTGC 61.608 60.000 0.00 0.00 32.34 3.68
1707 2073 0.035439 GATTTTGCTGGAGACCCCGA 60.035 55.000 0.00 0.00 37.93 5.14
1709 2075 0.035439 TTTTGCTGGAGACCCCGATC 60.035 55.000 0.00 0.00 37.93 3.69
1710 2076 2.238847 TTTGCTGGAGACCCCGATCG 62.239 60.000 8.51 8.51 37.93 3.69
1711 2077 2.833582 GCTGGAGACCCCGATCGA 60.834 66.667 18.66 0.00 37.93 3.59
1712 2078 3.121019 CTGGAGACCCCGATCGAC 58.879 66.667 18.66 5.12 37.93 4.20
1713 2079 1.454111 CTGGAGACCCCGATCGACT 60.454 63.158 18.66 10.03 37.93 4.18
1714 2080 1.448922 CTGGAGACCCCGATCGACTC 61.449 65.000 18.66 17.43 37.93 3.36
1715 2081 2.194889 GGAGACCCCGATCGACTCC 61.195 68.421 18.66 21.75 39.90 3.85
1716 2082 2.123812 AGACCCCGATCGACTCCC 60.124 66.667 18.66 1.53 0.00 4.30
1717 2083 3.225061 GACCCCGATCGACTCCCC 61.225 72.222 18.66 0.00 0.00 4.81
1739 2105 0.815615 CCGTTAGGAGATGGCTTGCC 60.816 60.000 4.43 4.43 41.02 4.52
1741 2107 0.815615 GTTAGGAGATGGCTTGCCCG 60.816 60.000 9.35 0.00 35.87 6.13
1742 2108 0.980754 TTAGGAGATGGCTTGCCCGA 60.981 55.000 9.35 0.00 35.87 5.14
1744 2110 2.892425 GAGATGGCTTGCCCGACG 60.892 66.667 9.35 0.00 35.87 5.12
1754 2120 3.507786 GCTTGCCCGACGAATTTATTTT 58.492 40.909 0.00 0.00 0.00 1.82
1755 2121 3.546271 GCTTGCCCGACGAATTTATTTTC 59.454 43.478 0.00 0.00 0.00 2.29
1756 2122 4.674362 GCTTGCCCGACGAATTTATTTTCT 60.674 41.667 0.00 0.00 0.00 2.52
1757 2123 5.448089 GCTTGCCCGACGAATTTATTTTCTA 60.448 40.000 0.00 0.00 0.00 2.10
1759 2125 4.034742 TGCCCGACGAATTTATTTTCTAGC 59.965 41.667 0.00 0.00 0.00 3.42
1760 2126 4.758561 CCCGACGAATTTATTTTCTAGCG 58.241 43.478 0.00 0.00 0.00 4.26
1761 2127 4.269363 CCCGACGAATTTATTTTCTAGCGT 59.731 41.667 0.00 0.00 0.00 5.07
1762 2128 5.421203 CCGACGAATTTATTTTCTAGCGTC 58.579 41.667 0.00 0.00 42.21 5.19
1763 2129 5.231568 CCGACGAATTTATTTTCTAGCGTCT 59.768 40.000 0.00 0.00 43.10 4.18
1766 2132 7.367484 CGACGAATTTATTTTCTAGCGTCTTTC 59.633 37.037 0.00 0.00 43.10 2.62
1767 2133 8.025243 ACGAATTTATTTTCTAGCGTCTTTCA 57.975 30.769 0.00 0.00 0.00 2.69
1779 2145 4.137543 AGCGTCTTTCAAAGAACAATCCT 58.862 39.130 0.00 0.00 39.67 3.24
1782 2148 4.023707 CGTCTTTCAAAGAACAATCCTGCT 60.024 41.667 0.00 0.00 39.67 4.24
1794 2160 2.403132 ATCCTGCTTAGGATGGCGGC 62.403 60.000 7.98 0.00 46.19 6.53
1807 2206 0.243907 TGGCGGCGCTATAGATTCTC 59.756 55.000 32.30 11.20 0.00 2.87
1809 2208 0.458716 GCGGCGCTATAGATTCTCCC 60.459 60.000 26.86 0.00 0.00 4.30
1821 2220 3.309296 AGATTCTCCCTAATCGCCTCAA 58.691 45.455 0.00 0.00 40.19 3.02
1830 2229 4.035675 CCCTAATCGCCTCAAAAGATGTTC 59.964 45.833 0.00 0.00 0.00 3.18
1831 2230 3.747099 AATCGCCTCAAAAGATGTTCG 57.253 42.857 0.00 0.00 0.00 3.95
1832 2231 2.163818 TCGCCTCAAAAGATGTTCGT 57.836 45.000 0.00 0.00 0.00 3.85
1834 2233 2.223144 TCGCCTCAAAAGATGTTCGTTG 59.777 45.455 0.00 0.00 0.00 4.10
1835 2234 2.032030 CGCCTCAAAAGATGTTCGTTGT 60.032 45.455 0.00 0.00 0.00 3.32
1837 2236 4.359706 GCCTCAAAAGATGTTCGTTGTTT 58.640 39.130 0.00 0.00 0.00 2.83
1838 2237 5.516090 GCCTCAAAAGATGTTCGTTGTTTA 58.484 37.500 0.00 0.00 0.00 2.01
1839 2238 5.625311 GCCTCAAAAGATGTTCGTTGTTTAG 59.375 40.000 0.00 0.00 0.00 1.85
1841 2240 6.125327 TCAAAAGATGTTCGTTGTTTAGCA 57.875 33.333 0.00 0.00 0.00 3.49
1842 2241 6.198687 TCAAAAGATGTTCGTTGTTTAGCAG 58.801 36.000 0.00 0.00 0.00 4.24
1854 2253 4.488126 TGTTTAGCAGCATTTGACACTC 57.512 40.909 0.00 0.00 0.00 3.51
1856 2255 2.113860 TAGCAGCATTTGACACTCCC 57.886 50.000 0.00 0.00 0.00 4.30
1857 2256 0.610232 AGCAGCATTTGACACTCCCC 60.610 55.000 0.00 0.00 0.00 4.81
1859 2258 0.883833 CAGCATTTGACACTCCCCAC 59.116 55.000 0.00 0.00 0.00 4.61
1860 2259 0.773644 AGCATTTGACACTCCCCACT 59.226 50.000 0.00 0.00 0.00 4.00
1863 2262 1.806542 CATTTGACACTCCCCACTTCG 59.193 52.381 0.00 0.00 0.00 3.79
1864 2263 1.124780 TTTGACACTCCCCACTTCGA 58.875 50.000 0.00 0.00 0.00 3.71
1865 2264 1.348064 TTGACACTCCCCACTTCGAT 58.652 50.000 0.00 0.00 0.00 3.59
1866 2265 1.348064 TGACACTCCCCACTTCGATT 58.652 50.000 0.00 0.00 0.00 3.34
1867 2266 1.697432 TGACACTCCCCACTTCGATTT 59.303 47.619 0.00 0.00 0.00 2.17
1869 2268 0.804989 CACTCCCCACTTCGATTTGC 59.195 55.000 0.00 0.00 0.00 3.68
1870 2269 0.400213 ACTCCCCACTTCGATTTGCA 59.600 50.000 0.00 0.00 0.00 4.08
1873 2272 3.278574 CTCCCCACTTCGATTTGCATAA 58.721 45.455 0.00 0.00 0.00 1.90
1918 2319 5.350640 GTCTAAGTCGATTTTTCCGTCCAAT 59.649 40.000 0.00 0.00 0.00 3.16
1928 2329 0.964860 TCCGTCCAATGGTGCAATGG 60.965 55.000 0.00 0.00 35.88 3.16
1930 2331 1.153784 GTCCAATGGTGCAATGGCG 60.154 57.895 0.00 0.00 45.35 5.69
1933 2334 1.585517 CAATGGTGCAATGGCGTCA 59.414 52.632 0.00 0.00 45.35 4.35
1934 2335 0.038435 CAATGGTGCAATGGCGTCAA 60.038 50.000 0.00 0.00 45.35 3.18
1945 2346 4.032104 GCAATGGCGTCAAATCTTGATTTC 59.968 41.667 5.31 0.00 42.47 2.17
1946 2347 5.162794 CAATGGCGTCAAATCTTGATTTCA 58.837 37.500 0.00 2.25 42.47 2.69
1947 2348 4.159377 TGGCGTCAAATCTTGATTTCAC 57.841 40.909 5.70 3.24 42.47 3.18
1950 2351 5.221224 TGGCGTCAAATCTTGATTTCACTTT 60.221 36.000 8.12 0.00 42.47 2.66
1988 2392 1.941377 TTCCCCATTGATTGCTTGCT 58.059 45.000 0.00 0.00 0.00 3.91
1996 2400 1.900245 TGATTGCTTGCTTGAGCTCA 58.100 45.000 13.74 13.74 43.11 4.26
2012 2419 2.094442 AGCTCAGCTCGACCTTCTTTAC 60.094 50.000 0.00 0.00 30.62 2.01
2031 2438 1.005340 CAGATCGCAGCACTTCCTTC 58.995 55.000 0.00 0.00 0.00 3.46
2041 2448 4.008330 CAGCACTTCCTTCATGAACTCAT 58.992 43.478 3.38 0.00 36.96 2.90
2083 2490 7.538575 CGGGTGAAAATTCTATTGATCAAGTT 58.461 34.615 14.54 0.22 0.00 2.66
2125 2532 9.793259 TCTGAATTACAAAGTTCAATAACCTCT 57.207 29.630 0.00 0.00 36.15 3.69
2129 2536 8.918202 ATTACAAAGTTCAATAACCTCTGACA 57.082 30.769 0.00 0.00 36.15 3.58
2165 2572 4.102649 CCAAACAACGGTTCTTTCTTCAC 58.897 43.478 0.00 0.00 35.82 3.18
2168 2575 4.616181 ACAACGGTTCTTTCTTCACTTG 57.384 40.909 0.00 0.00 0.00 3.16
2221 2628 6.682863 CACTATTTTGACTACGCTTAATGTGC 59.317 38.462 0.00 0.00 0.00 4.57
2222 2629 5.621197 ATTTTGACTACGCTTAATGTGCA 57.379 34.783 0.00 0.00 0.00 4.57
2226 2633 6.729391 TTGACTACGCTTAATGTGCATAAA 57.271 33.333 0.00 0.00 0.00 1.40
2229 2636 5.183228 ACTACGCTTAATGTGCATAAAGGT 58.817 37.500 0.00 0.00 0.00 3.50
2236 2643 3.719268 ATGTGCATAAAGGTGGTCTCA 57.281 42.857 0.00 0.00 0.00 3.27
2251 2658 2.500504 GGTCTCACGGAGTTCCCTTAAT 59.499 50.000 0.00 0.00 41.61 1.40
2274 2681 2.484264 GCTTAATCTCACGCACCAAAGT 59.516 45.455 0.00 0.00 0.00 2.66
2290 2697 5.865552 CACCAAAGTAGCAAAAATGGATCTG 59.134 40.000 5.06 0.00 0.00 2.90
2300 2707 6.071952 AGCAAAAATGGATCTGTTCGTGTTAT 60.072 34.615 0.00 0.00 0.00 1.89
2303 2710 7.630242 AAAATGGATCTGTTCGTGTTATCAT 57.370 32.000 0.00 0.00 0.00 2.45
2304 2711 6.851222 AATGGATCTGTTCGTGTTATCATC 57.149 37.500 0.00 0.00 0.00 2.92
2305 2712 5.337578 TGGATCTGTTCGTGTTATCATCA 57.662 39.130 0.00 0.00 0.00 3.07
2306 2713 5.917462 TGGATCTGTTCGTGTTATCATCAT 58.083 37.500 0.00 0.00 0.00 2.45
2347 2754 3.308688 CCAAAGAATCCATCTCCACCTGT 60.309 47.826 0.00 0.00 37.42 4.00
2350 2757 5.983333 AAGAATCCATCTCCACCTGTATT 57.017 39.130 0.00 0.00 37.42 1.89
2356 2763 3.455910 CCATCTCCACCTGTATTGGAAGA 59.544 47.826 0.00 0.00 42.76 2.87
2382 2789 8.221965 TCAGTTCTCTGTAAAGCGATAGATAA 57.778 34.615 0.00 0.00 41.91 1.75
2383 2790 8.683615 TCAGTTCTCTGTAAAGCGATAGATAAA 58.316 33.333 0.00 0.00 41.91 1.40
2399 2806 7.116948 CGATAGATAAACCTTCCATACAAGCAG 59.883 40.741 0.00 0.00 39.76 4.24
2441 2848 6.175712 CATTCCTGCAAGAGAAAAGTACTC 57.824 41.667 0.00 0.00 34.07 2.59
2442 2849 5.552870 TTCCTGCAAGAGAAAAGTACTCT 57.447 39.130 0.00 0.00 45.13 3.24
2443 2850 4.887748 TCCTGCAAGAGAAAAGTACTCTG 58.112 43.478 0.00 0.00 42.85 3.35
2444 2851 3.434984 CCTGCAAGAGAAAAGTACTCTGC 59.565 47.826 0.00 0.00 42.85 4.26
2445 2852 4.060900 CTGCAAGAGAAAAGTACTCTGCA 58.939 43.478 0.00 2.95 42.85 4.41
2468 2875 6.144080 GCATCTGCATGAAGAGAAAATAATGC 59.856 38.462 9.83 7.66 41.59 3.56
2470 2877 7.024340 TCTGCATGAAGAGAAAATAATGCTC 57.976 36.000 0.00 0.00 40.74 4.26
2478 2885 6.567602 AGAGAAAATAATGCTCCCAGTACT 57.432 37.500 0.00 0.00 0.00 2.73
2482 2889 7.155328 AGAAAATAATGCTCCCAGTACTATCG 58.845 38.462 0.00 0.00 0.00 2.92
2497 2904 1.787155 CTATCGCGAAGAACCATTCCG 59.213 52.381 15.24 0.00 0.00 4.30
2516 2923 1.812922 GCACCTGCTCGGTCATCAG 60.813 63.158 0.00 0.00 44.93 2.90
2517 2924 1.593787 CACCTGCTCGGTCATCAGT 59.406 57.895 0.00 0.00 44.93 3.41
2588 3016 2.604174 GCCGTGGCAGTGTGTGTAC 61.604 63.158 5.89 0.00 41.49 2.90
2605 3033 2.632512 TGTACAGTTGGACAGATGCTCA 59.367 45.455 0.00 0.00 0.00 4.26
2632 3060 5.685075 CGAGATAGTATGCTTCCCCTTGTTT 60.685 44.000 0.00 0.00 0.00 2.83
2647 3075 3.558505 CTTGTTTTGGTCGCAATCTGAG 58.441 45.455 0.00 0.00 0.00 3.35
2648 3076 2.571212 TGTTTTGGTCGCAATCTGAGT 58.429 42.857 0.00 0.00 0.00 3.41
2655 3083 3.250762 TGGTCGCAATCTGAGTTTTTGAG 59.749 43.478 0.00 0.00 0.00 3.02
2656 3084 3.498397 GGTCGCAATCTGAGTTTTTGAGA 59.502 43.478 0.00 0.00 0.00 3.27
2658 3086 4.212214 GTCGCAATCTGAGTTTTTGAGAGT 59.788 41.667 0.00 0.00 31.35 3.24
2681 3109 6.013725 AGTCACCAATGAGTCCACATAACTAA 60.014 38.462 0.00 0.00 32.71 2.24
2683 3111 5.354234 CACCAATGAGTCCACATAACTAACC 59.646 44.000 0.00 0.00 0.00 2.85
2685 3113 5.354234 CCAATGAGTCCACATAACTAACCAC 59.646 44.000 0.00 0.00 0.00 4.16
2703 3131 2.301346 CACAAAGCTCCTTGACACCTT 58.699 47.619 5.15 0.00 0.00 3.50
2708 3136 0.868406 GCTCCTTGACACCTTCAACG 59.132 55.000 0.00 0.00 39.45 4.10
2709 3137 1.540363 GCTCCTTGACACCTTCAACGA 60.540 52.381 0.00 0.00 39.45 3.85
2743 3171 2.710377 TCATGGGTCACTTCATTTCGG 58.290 47.619 0.00 0.00 0.00 4.30
2805 3233 4.760715 CCTATCAATCTCAGGCAAAGGATG 59.239 45.833 0.00 0.00 0.00 3.51
2806 3234 3.008835 TCAATCTCAGGCAAAGGATGG 57.991 47.619 0.00 0.00 0.00 3.51
2821 3249 0.381089 GATGGAGCACATTCAGCAGC 59.619 55.000 0.00 0.00 40.72 5.25
2833 3261 2.204059 AGCAGCCACTCCCTTCCT 60.204 61.111 0.00 0.00 0.00 3.36
2836 3264 1.002868 CAGCCACTCCCTTCCTGTG 60.003 63.158 0.00 0.00 0.00 3.66
2844 3272 3.066760 CACTCCCTTCCTGTGTTTTGAAC 59.933 47.826 0.00 0.00 0.00 3.18
2845 3273 2.623416 CTCCCTTCCTGTGTTTTGAACC 59.377 50.000 0.00 0.00 0.00 3.62
2857 3285 5.299279 TGTGTTTTGAACCTCTTCCAGATTC 59.701 40.000 0.00 0.00 0.00 2.52
2861 3289 0.984230 AACCTCTTCCAGATTCGGCA 59.016 50.000 0.00 0.00 0.00 5.69
2911 3339 1.896220 TTTGCACAGCTAAGGGACAG 58.104 50.000 0.00 0.00 0.00 3.51
2919 3347 0.461693 GCTAAGGGACAGCAGCAGAG 60.462 60.000 0.00 0.00 38.93 3.35
2938 3366 3.006247 GAGAGCATGGAAAGTGTCTTCC 58.994 50.000 0.00 0.00 44.54 3.46
2980 3408 3.118261 GGCATGTCCCTGATAACTCAAGA 60.118 47.826 0.00 0.00 0.00 3.02
3065 3493 0.462759 GACAGTAGGAGGCACATGGC 60.463 60.000 0.00 0.00 43.74 4.40
3094 3522 8.476064 TCCAAATAATTATAATCTGCCAGCAA 57.524 30.769 0.00 0.00 0.00 3.91
3121 3549 1.381191 TCCATCCGGTGCTGAGCTA 60.381 57.895 5.83 0.00 0.00 3.32
3194 3622 4.025145 CCGACTTGACTGAAAAAGTACCAC 60.025 45.833 0.00 0.00 40.07 4.16
3228 3656 1.667724 CCAAGCGATCACATCTTCACC 59.332 52.381 0.00 0.00 0.00 4.02
3230 3658 2.306341 AGCGATCACATCTTCACCTG 57.694 50.000 0.00 0.00 0.00 4.00
3235 3663 3.381590 CGATCACATCTTCACCTGGTCTA 59.618 47.826 0.00 0.00 0.00 2.59
3255 3683 6.016276 GGTCTAGGTGAAGCTTTGATTTTCAA 60.016 38.462 0.00 0.00 34.03 2.69
3256 3684 7.309438 GGTCTAGGTGAAGCTTTGATTTTCAAT 60.309 37.037 0.00 0.00 36.11 2.57
3286 3714 5.130975 TGATATGTCACATGGTAAGAAGGCT 59.869 40.000 0.00 0.00 0.00 4.58
3289 3717 3.072330 TGTCACATGGTAAGAAGGCTGAA 59.928 43.478 0.00 0.00 0.00 3.02
3292 3720 3.019564 ACATGGTAAGAAGGCTGAATGC 58.980 45.455 0.00 0.00 41.94 3.56
3313 3741 3.606153 GCAGTGTGTTAACATTCCACGAC 60.606 47.826 12.26 8.94 38.92 4.34
3314 3742 3.059188 CAGTGTGTTAACATTCCACGACC 60.059 47.826 12.26 0.00 38.92 4.79
3365 3793 2.424842 AATTCTGCACCGCCCCTGAA 62.425 55.000 0.00 0.00 0.00 3.02
3370 3798 2.429930 CACCGCCCCTGAACAGAA 59.570 61.111 3.19 0.00 0.00 3.02
3448 3876 0.612174 TCCCGTCTCCAACTCTCCAG 60.612 60.000 0.00 0.00 0.00 3.86
3460 3888 4.195416 CAACTCTCCAGATTAAGCCCTTC 58.805 47.826 0.00 0.00 0.00 3.46
3466 3894 4.781934 TCCAGATTAAGCCCTTCTTTAGC 58.218 43.478 0.00 0.00 36.25 3.09
3469 3897 5.595952 CCAGATTAAGCCCTTCTTTAGCAAT 59.404 40.000 0.00 0.00 36.25 3.56
3496 3924 3.347216 ACCATAACTGATTGCTGTCCAC 58.653 45.455 0.00 0.00 0.00 4.02
3538 3966 4.558860 GCGAATGCAGTATTTTCCAACTTC 59.441 41.667 0.00 0.00 42.15 3.01
3545 3973 5.640732 CAGTATTTTCCAACTTCCCATTCG 58.359 41.667 0.00 0.00 0.00 3.34
3568 3996 7.047891 TCGGATAATATTTGCTCTTCAACAGT 58.952 34.615 0.00 0.00 33.73 3.55
3570 3998 7.641411 CGGATAATATTTGCTCTTCAACAGTTG 59.359 37.037 6.99 6.99 33.73 3.16
3577 4005 2.792542 GCTCTTCAACAGTTGTGCACAC 60.793 50.000 21.56 14.79 0.00 3.82
3607 4035 1.486211 GCCTAGTCAGTAGCCTCCAA 58.514 55.000 0.00 0.00 0.00 3.53
3627 4055 4.722700 TTGGCGAGCAAGGAGGGC 62.723 66.667 0.00 0.00 0.00 5.19
3646 4074 4.461781 AGGGCTTGATTGAACATTCTGAAG 59.538 41.667 0.00 0.00 0.00 3.02
3652 4080 7.332926 GCTTGATTGAACATTCTGAAGTCTCTA 59.667 37.037 0.00 0.00 0.00 2.43
3653 4081 9.212641 CTTGATTGAACATTCTGAAGTCTCTAA 57.787 33.333 0.00 0.00 0.00 2.10
3664 4092 1.375013 GTCTCTAAAACCGGCGCCA 60.375 57.895 28.98 4.11 0.00 5.69
3684 4112 1.956477 ACCTTTACACTTTGGCTGCTG 59.044 47.619 0.00 0.00 0.00 4.41
3685 4113 1.956477 CCTTTACACTTTGGCTGCTGT 59.044 47.619 0.00 0.00 0.00 4.40
3694 4122 1.238439 TTGGCTGCTGTAGTTTCTGC 58.762 50.000 0.00 0.00 0.00 4.26
3695 4123 0.108396 TGGCTGCTGTAGTTTCTGCA 59.892 50.000 0.00 0.00 39.29 4.41
3696 4124 0.519077 GGCTGCTGTAGTTTCTGCAC 59.481 55.000 0.00 0.00 37.36 4.57
3697 4125 1.517242 GCTGCTGTAGTTTCTGCACT 58.483 50.000 0.00 0.00 37.36 4.40
3698 4126 1.462670 GCTGCTGTAGTTTCTGCACTC 59.537 52.381 0.00 0.00 37.36 3.51
3699 4127 2.759191 CTGCTGTAGTTTCTGCACTCA 58.241 47.619 0.00 0.00 37.36 3.41
3700 4128 3.332919 CTGCTGTAGTTTCTGCACTCAT 58.667 45.455 0.00 0.00 37.36 2.90
3701 4129 3.743521 TGCTGTAGTTTCTGCACTCATT 58.256 40.909 0.00 0.00 37.36 2.57
3702 4130 4.893608 TGCTGTAGTTTCTGCACTCATTA 58.106 39.130 0.00 0.00 37.36 1.90
3811 4287 7.951911 TCTAGTAATATAATCCCTAGGCCAGT 58.048 38.462 5.01 0.00 0.00 4.00
3812 4288 9.076975 TCTAGTAATATAATCCCTAGGCCAGTA 57.923 37.037 5.01 0.00 0.00 2.74
3964 4463 1.139058 CGGATACTGTTCCCTTGGAGG 59.861 57.143 0.00 0.00 31.21 4.30
4103 4602 3.195661 GAGCCTCGGGTAAATACTTGTG 58.804 50.000 0.00 0.00 0.00 3.33
4113 4612 6.348213 CGGGTAAATACTTGTGTCCTTTCAAG 60.348 42.308 0.00 0.00 44.29 3.02
4165 4664 2.591753 GCATGCCTGCCTACCTGA 59.408 61.111 6.36 0.00 42.88 3.86
4179 4678 4.201822 GCCTACCTGATGCTTAAGTTTTCG 60.202 45.833 4.02 0.00 0.00 3.46
4279 4782 4.260784 GCGGTTAGTATTTTCTGGCAGATG 60.261 45.833 19.50 0.00 0.00 2.90
4312 4817 5.243730 ACCATTTCAGTCCGTTGATGATTTT 59.756 36.000 0.00 0.00 0.00 1.82
4314 4819 4.764679 TTCAGTCCGTTGATGATTTTGG 57.235 40.909 0.00 0.00 0.00 3.28
4443 4948 6.846325 GAAGGTACTACTTTCCATGCATAC 57.154 41.667 0.00 0.00 38.49 2.39
4564 5069 0.400213 TACACTTGTGAGGGCCAAGG 59.600 55.000 6.18 0.00 42.84 3.61
4624 5129 2.380084 TAGCGAACATCCAACCTGTC 57.620 50.000 0.00 0.00 0.00 3.51
4661 5170 1.532868 CTGGCACAAGTAAGACTGCAC 59.467 52.381 0.00 0.00 38.70 4.57
4686 5195 9.174166 ACAAATTTACCCTGACATATAACTCAC 57.826 33.333 0.00 0.00 0.00 3.51
4687 5196 9.173021 CAAATTTACCCTGACATATAACTCACA 57.827 33.333 0.00 0.00 0.00 3.58
4688 5197 9.920946 AAATTTACCCTGACATATAACTCACAT 57.079 29.630 0.00 0.00 0.00 3.21
4690 5199 8.958119 TTTACCCTGACATATAACTCACATTC 57.042 34.615 0.00 0.00 0.00 2.67
4693 5202 8.319057 ACCCTGACATATAACTCACATTCTTA 57.681 34.615 0.00 0.00 0.00 2.10
4710 5233 9.988350 CACATTCTTAATTATTGTACCTCACAC 57.012 33.333 0.00 0.00 36.69 3.82
4715 5238 9.653287 TCTTAATTATTGTACCTCACACTCTTG 57.347 33.333 0.00 0.00 36.69 3.02
4719 5242 9.520515 AATTATTGTACCTCACACTCTTGATTT 57.479 29.630 0.00 0.00 36.69 2.17
4721 5244 6.861065 TTGTACCTCACACTCTTGATTTTC 57.139 37.500 0.00 0.00 36.69 2.29
4724 5249 6.706270 TGTACCTCACACTCTTGATTTTCTTC 59.294 38.462 0.00 0.00 30.04 2.87
4752 5277 1.571919 AAGTCGACAAGATATGCCGC 58.428 50.000 19.50 0.00 34.60 6.53
4784 5309 3.425162 ACTCTGGGTGGTTCATTTCTC 57.575 47.619 0.00 0.00 0.00 2.87
4839 5364 4.916249 AGAATGACGTCTCAAACTCGTAAC 59.084 41.667 17.92 0.00 37.92 2.50
4854 5379 3.833442 TCGTAACTAGATGCATATGCCG 58.167 45.455 24.54 16.37 41.18 5.69
4892 5417 6.761099 TTAATACTCTCAGAGACTGGTGTC 57.239 41.667 9.27 0.00 43.22 3.67
4926 5459 7.995463 TGTTTACTTTCAACTAATGTTTGCC 57.005 32.000 0.00 0.00 33.52 4.52
4933 5493 4.211125 TCAACTAATGTTTGCCTGGTGAA 58.789 39.130 0.00 0.00 33.52 3.18
4934 5494 4.037446 TCAACTAATGTTTGCCTGGTGAAC 59.963 41.667 0.00 1.56 33.52 3.18
4935 5495 3.832527 ACTAATGTTTGCCTGGTGAACT 58.167 40.909 13.02 0.85 0.00 3.01
4936 5496 4.215109 ACTAATGTTTGCCTGGTGAACTT 58.785 39.130 13.02 6.45 0.00 2.66
4937 5497 3.733443 AATGTTTGCCTGGTGAACTTC 57.267 42.857 13.02 0.00 0.00 3.01
4938 5498 2.136298 TGTTTGCCTGGTGAACTTCA 57.864 45.000 13.02 0.00 0.00 3.02
4939 5499 2.451490 TGTTTGCCTGGTGAACTTCAA 58.549 42.857 13.02 0.00 0.00 2.69
4940 5500 2.828520 TGTTTGCCTGGTGAACTTCAAA 59.171 40.909 13.02 3.47 0.00 2.69
4941 5501 3.119173 TGTTTGCCTGGTGAACTTCAAAG 60.119 43.478 13.02 0.00 0.00 2.77
4942 5502 1.691196 TGCCTGGTGAACTTCAAAGG 58.309 50.000 13.97 13.97 36.23 3.11
4943 5503 1.064017 TGCCTGGTGAACTTCAAAGGT 60.064 47.619 17.40 0.00 35.81 3.50
4944 5504 1.338020 GCCTGGTGAACTTCAAAGGTG 59.662 52.381 17.40 0.29 35.81 4.00
4945 5505 2.654863 CCTGGTGAACTTCAAAGGTGT 58.345 47.619 11.40 0.00 31.33 4.16
4946 5506 3.815809 CCTGGTGAACTTCAAAGGTGTA 58.184 45.455 11.40 0.00 31.33 2.90
4947 5507 4.398319 CCTGGTGAACTTCAAAGGTGTAT 58.602 43.478 11.40 0.00 31.33 2.29
4948 5508 4.216257 CCTGGTGAACTTCAAAGGTGTATG 59.784 45.833 11.40 0.00 31.33 2.39
4949 5509 4.787551 TGGTGAACTTCAAAGGTGTATGT 58.212 39.130 0.00 0.00 0.00 2.29
4950 5510 4.578516 TGGTGAACTTCAAAGGTGTATGTG 59.421 41.667 0.00 0.00 0.00 3.21
4951 5511 4.578928 GGTGAACTTCAAAGGTGTATGTGT 59.421 41.667 0.00 0.00 0.00 3.72
4952 5512 5.067283 GGTGAACTTCAAAGGTGTATGTGTT 59.933 40.000 0.00 0.00 0.00 3.32
4953 5513 6.405397 GGTGAACTTCAAAGGTGTATGTGTTT 60.405 38.462 0.00 0.00 0.00 2.83
4954 5514 6.472163 GTGAACTTCAAAGGTGTATGTGTTTG 59.528 38.462 0.00 0.00 0.00 2.93
4955 5515 6.375736 TGAACTTCAAAGGTGTATGTGTTTGA 59.624 34.615 0.00 0.00 37.18 2.69
4956 5516 6.377327 ACTTCAAAGGTGTATGTGTTTGAG 57.623 37.500 0.00 0.00 39.43 3.02
4957 5517 6.119536 ACTTCAAAGGTGTATGTGTTTGAGA 58.880 36.000 0.00 0.00 39.43 3.27
4958 5518 6.601613 ACTTCAAAGGTGTATGTGTTTGAGAA 59.398 34.615 0.00 0.00 39.43 2.87
4959 5519 7.122055 ACTTCAAAGGTGTATGTGTTTGAGAAA 59.878 33.333 0.00 0.00 39.43 2.52
5185 5745 3.363673 GCTTCAGTTTTACCACTACACGC 60.364 47.826 0.00 0.00 0.00 5.34
5205 5765 3.065371 CGCATTCACCTAAAATCTGTCCC 59.935 47.826 0.00 0.00 0.00 4.46
5348 6106 8.199449 CCATGTGTTATAAAATTCTTGGCTGAT 58.801 33.333 0.00 0.00 0.00 2.90
5362 6120 2.076863 GGCTGATGTTGTAGGTGTGAC 58.923 52.381 0.00 0.00 0.00 3.67
5435 6193 4.853924 AAAATAAGGTGCTTGTGTCAGG 57.146 40.909 0.00 0.00 0.00 3.86
5556 6314 0.692476 TTGGCTGATGCTGTAGGTGT 59.308 50.000 0.00 0.00 39.59 4.16
5557 6315 0.692476 TGGCTGATGCTGTAGGTGTT 59.308 50.000 0.00 0.00 39.59 3.32
5632 6391 1.133823 TGTTTGTGTCAGGAGTGGCAT 60.134 47.619 0.00 0.00 41.38 4.40
5634 6393 3.146066 GTTTGTGTCAGGAGTGGCATTA 58.854 45.455 0.00 0.00 41.38 1.90
5723 6518 1.199097 CTTGGTGGGTCATGTAAACGC 59.801 52.381 0.00 0.00 0.00 4.84
5862 6667 6.515035 ACAATTCTTTGCTACAGGTAACTTGC 60.515 38.462 0.00 0.00 40.29 4.01
5959 6813 5.392703 GCAATCAGATTCAGATGAAGTGCAA 60.393 40.000 7.97 0.00 38.98 4.08
5972 6826 2.998316 AGTGCAAGAGAATAGCTCCC 57.002 50.000 0.00 0.00 45.10 4.30
6026 6880 6.753279 TGAAGACTTTCAGAAAGCAATTGTTG 59.247 34.615 21.00 0.00 42.27 3.33
6031 6885 3.951306 TCAGAAAGCAATTGTTGTGTCG 58.049 40.909 7.40 0.00 0.00 4.35
6034 6888 0.031994 AAGCAATTGTTGTGTCGGCC 59.968 50.000 7.40 0.00 0.00 6.13
6051 6917 4.082523 CGCCCCTCGGAGAAAGCA 62.083 66.667 6.58 0.00 34.09 3.91
6125 7000 0.764890 AAAGTCACTGGGCAGTAGCA 59.235 50.000 0.00 0.00 44.61 3.49
6138 7013 2.704572 CAGTAGCACCTCAAAGAAGGG 58.295 52.381 0.00 0.00 41.04 3.95
6139 7014 1.630878 AGTAGCACCTCAAAGAAGGGG 59.369 52.381 0.00 0.00 43.25 4.79
6206 7081 0.889186 ACGGCTGAAACGGAAGCAAT 60.889 50.000 0.00 0.00 41.36 3.56
6244 7119 2.391389 GCACGGGCTTTTCTCTCCG 61.391 63.158 0.00 0.00 46.95 4.63
6309 7184 2.234908 CCAGGAAGGACGTTCAGAGATT 59.765 50.000 9.90 0.00 41.22 2.40
6324 7208 1.736681 GAGATTCAGTGTGCAGCCTTC 59.263 52.381 0.00 0.00 0.00 3.46
6480 7892 1.388065 CGGCCTGAAGACTCTCCGAT 61.388 60.000 0.00 0.00 39.23 4.18
6481 7893 0.103937 GGCCTGAAGACTCTCCGATG 59.896 60.000 0.00 0.00 0.00 3.84
6637 8052 5.164620 TGTGGCTGAACTTCTATGAATCA 57.835 39.130 0.00 0.00 0.00 2.57
6687 8102 1.295792 GTGAACAAGAGAACGGTGCA 58.704 50.000 0.00 0.00 0.00 4.57
6700 8115 1.599576 GGTGCAGAGGAGAAGGGAC 59.400 63.158 0.00 0.00 0.00 4.46
6729 8144 0.469494 TTGGTTCAGAGAGCAGCACA 59.531 50.000 0.00 0.00 0.00 4.57
6742 8184 0.098200 CAGCACATTCACGCTCCATG 59.902 55.000 0.00 0.00 35.96 3.66
6791 8239 3.723348 GACAAACCGAGCCACCGC 61.723 66.667 0.00 0.00 0.00 5.68
6881 8443 2.202987 CTCCCGCTGATCAGGTGC 60.203 66.667 23.89 10.00 0.00 5.01
6891 8453 0.251354 GATCAGGTGCTGGCTGAAGA 59.749 55.000 0.00 0.00 31.51 2.87
6935 8572 1.917495 CCACCAGCTCCATCCATGA 59.083 57.895 0.00 0.00 0.00 3.07
6944 8743 2.698803 CTCCATCCATGAACGTTGTCA 58.301 47.619 5.00 0.00 0.00 3.58
6952 8751 0.323629 TGAACGTTGTCATCCCTCCC 59.676 55.000 5.00 0.00 0.00 4.30
6983 8782 1.832912 GGCCGACCTGATCCATCTT 59.167 57.895 0.00 0.00 0.00 2.40
6989 8788 2.208431 GACCTGATCCATCTTCAAGCG 58.792 52.381 0.00 0.00 0.00 4.68
7146 8948 3.756963 GGTCTAACACCTCCAAATCCAAC 59.243 47.826 0.00 0.00 42.84 3.77
7216 9032 1.486726 CCTTCTCCATCACCCTGTACC 59.513 57.143 0.00 0.00 0.00 3.34
7225 9041 2.116238 TCACCCTGTACCCTGCTTATC 58.884 52.381 0.00 0.00 0.00 1.75
7269 9085 8.153550 TCAGTGCTTACTATAGGTAGGTAGTAC 58.846 40.741 4.43 0.00 34.19 2.73
7270 9086 8.156165 CAGTGCTTACTATAGGTAGGTAGTACT 58.844 40.741 4.43 0.00 38.09 2.73
7271 9087 8.156165 AGTGCTTACTATAGGTAGGTAGTACTG 58.844 40.741 5.39 0.00 37.20 2.74
7272 9088 7.390162 GTGCTTACTATAGGTAGGTAGTACTGG 59.610 44.444 5.39 0.00 34.19 4.00
7273 9089 7.072961 TGCTTACTATAGGTAGGTAGTACTGGT 59.927 40.741 5.39 0.00 34.19 4.00
7274 9090 8.598041 GCTTACTATAGGTAGGTAGTACTGGTA 58.402 40.741 5.39 0.00 34.19 3.25
7275 9091 9.936759 CTTACTATAGGTAGGTAGTACTGGTAC 57.063 40.741 5.39 4.27 34.19 3.34
7276 9092 9.676129 TTACTATAGGTAGGTAGTACTGGTACT 57.324 37.037 16.17 16.17 39.61 2.73
7278 9094 9.320295 ACTATAGGTAGGTAGTACTGGTACTAG 57.680 40.741 17.63 4.44 45.97 2.57
7339 9155 5.064707 TGTTTAATCTTAGCATCGTCAAGCC 59.935 40.000 0.00 0.00 0.00 4.35
7377 9194 1.969923 GTGGAGGCATAGAGCTCTGAT 59.030 52.381 26.78 12.46 44.79 2.90
7380 9197 3.075134 TGGAGGCATAGAGCTCTGATCTA 59.925 47.826 26.78 5.99 44.79 1.98
7383 9200 5.336690 GGAGGCATAGAGCTCTGATCTAAAG 60.337 48.000 26.78 3.08 44.79 1.85
7417 9234 3.939837 CTGTGAGATGGCGCGTGGT 62.940 63.158 8.43 0.00 0.00 4.16
7428 9250 2.506438 GCGTGGTGCTACGACTCC 60.506 66.667 12.07 0.00 46.46 3.85
7437 9259 1.272490 TGCTACGACTCCCTTTCTGTG 59.728 52.381 0.00 0.00 0.00 3.66
7440 9262 2.751166 ACGACTCCCTTTCTGTGATG 57.249 50.000 0.00 0.00 0.00 3.07
7532 9356 2.627945 TGCGTGTATCATGGGAAAGTC 58.372 47.619 0.00 0.00 0.00 3.01
7570 9394 2.615869 GCTAGATCATTCGAGCCATCC 58.384 52.381 0.00 0.00 42.76 3.51
7593 9417 0.739813 GTATCCTTCTGCGTGCGGTT 60.740 55.000 0.00 0.00 0.00 4.44
7608 9432 1.402325 GCGGTTTTACTGGTCATTGCC 60.402 52.381 0.00 0.00 0.00 4.52
7807 9633 3.181445 ACTCACATCCAAGGTGCAGTTTA 60.181 43.478 0.00 0.00 36.22 2.01
7808 9634 3.820467 CTCACATCCAAGGTGCAGTTTAA 59.180 43.478 0.00 0.00 36.22 1.52
7862 9830 9.556030 GATTCTTCTTTTAAAAAGACGGTATGG 57.444 33.333 1.66 0.00 31.46 2.74
8052 11074 0.373716 GGCACTTCCGCTTTATGTCG 59.626 55.000 0.00 0.00 0.00 4.35
8054 11076 2.264813 GCACTTCCGCTTTATGTCGTA 58.735 47.619 0.00 0.00 0.00 3.43
8087 11121 5.551233 TGTTCAAAACAAACCCAAACATGA 58.449 33.333 0.00 0.00 38.72 3.07
8102 11136 1.233019 CATGATCGATCACCAAGGCC 58.767 55.000 29.49 0.00 40.03 5.19
8152 11186 2.821969 GTTCTCTGCATGGATGTTTGGT 59.178 45.455 0.00 0.00 0.00 3.67
8156 11190 0.409092 TGCATGGATGTTTGGTCCCT 59.591 50.000 0.00 0.00 34.76 4.20
8158 11192 1.205417 GCATGGATGTTTGGTCCCTTG 59.795 52.381 0.00 0.00 34.76 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 130 1.977188 CGCAGGAAACCGGAAAAATC 58.023 50.000 9.46 0.00 0.00 2.17
151 155 1.027357 AAGCACTGTTTCTGCCACAG 58.973 50.000 0.00 0.00 46.18 3.66
154 158 0.106769 TCCAAGCACTGTTTCTGCCA 60.107 50.000 0.00 0.00 35.01 4.92
157 161 7.572502 GAATTTATTCCAAGCACTGTTTCTG 57.427 36.000 0.00 0.00 0.00 3.02
189 197 0.251341 TTGGAGCAGAGGGGAAAAGC 60.251 55.000 0.00 0.00 0.00 3.51
246 255 5.234543 GTGGATTTTACTGGATTCTCGTAGC 59.765 44.000 0.00 0.00 0.00 3.58
318 329 4.919754 ACTTTTGTTTCTACCGCGTACTAG 59.080 41.667 4.92 0.60 0.00 2.57
319 330 4.870363 ACTTTTGTTTCTACCGCGTACTA 58.130 39.130 4.92 0.00 0.00 1.82
320 331 3.721035 ACTTTTGTTTCTACCGCGTACT 58.279 40.909 4.92 0.00 0.00 2.73
343 354 4.846779 TTTTACTGTGCCAATCCTGTTC 57.153 40.909 0.00 0.00 0.00 3.18
375 386 0.375106 GAAGCGCATACCAGAAGTGC 59.625 55.000 11.47 0.00 38.96 4.40
437 448 2.203401 CTACAGGAGTAGGACTCGACG 58.797 57.143 0.73 0.00 45.96 5.12
488 503 1.065126 GGACTTGACTTGGCCTAGCAT 60.065 52.381 14.60 0.00 0.00 3.79
489 504 0.324943 GGACTTGACTTGGCCTAGCA 59.675 55.000 14.60 10.31 0.00 3.49
490 505 0.741221 CGGACTTGACTTGGCCTAGC 60.741 60.000 14.60 7.80 0.00 3.42
492 507 1.295423 GCGGACTTGACTTGGCCTA 59.705 57.895 3.32 0.00 0.00 3.93
493 508 2.032681 GCGGACTTGACTTGGCCT 59.967 61.111 3.32 0.00 0.00 5.19
496 511 3.777925 CGCGCGGACTTGACTTGG 61.778 66.667 24.84 0.00 0.00 3.61
498 513 3.036084 CACGCGCGGACTTGACTT 61.036 61.111 35.22 6.31 0.00 3.01
518 540 1.135402 CCGCCGGATTGAAAAGGAAAG 60.135 52.381 5.05 0.00 0.00 2.62
617 643 2.029844 GTGCGTGTGGAAGAGAGGC 61.030 63.158 0.00 0.00 0.00 4.70
632 658 2.087009 GCTGTACGGACACTCGTGC 61.087 63.158 5.68 0.00 43.70 5.34
700 737 2.430921 CGTCGTGGGAGTGTCAGC 60.431 66.667 0.00 0.00 0.00 4.26
755 792 3.616317 CGAGTGAGAGTGAGTGAGAGAGA 60.616 52.174 0.00 0.00 0.00 3.10
756 793 2.672874 CGAGTGAGAGTGAGTGAGAGAG 59.327 54.545 0.00 0.00 0.00 3.20
757 794 2.694213 CGAGTGAGAGTGAGTGAGAGA 58.306 52.381 0.00 0.00 0.00 3.10
758 795 1.130373 GCGAGTGAGAGTGAGTGAGAG 59.870 57.143 0.00 0.00 0.00 3.20
759 796 1.160989 GCGAGTGAGAGTGAGTGAGA 58.839 55.000 0.00 0.00 0.00 3.27
760 797 0.170116 GGCGAGTGAGAGTGAGTGAG 59.830 60.000 0.00 0.00 0.00 3.51
761 798 0.537371 TGGCGAGTGAGAGTGAGTGA 60.537 55.000 0.00 0.00 0.00 3.41
762 799 0.529833 ATGGCGAGTGAGAGTGAGTG 59.470 55.000 0.00 0.00 0.00 3.51
763 800 1.203523 GAATGGCGAGTGAGAGTGAGT 59.796 52.381 0.00 0.00 0.00 3.41
764 801 1.476085 AGAATGGCGAGTGAGAGTGAG 59.524 52.381 0.00 0.00 0.00 3.51
765 802 1.550327 AGAATGGCGAGTGAGAGTGA 58.450 50.000 0.00 0.00 0.00 3.41
766 803 2.376808 AAGAATGGCGAGTGAGAGTG 57.623 50.000 0.00 0.00 0.00 3.51
828 878 4.426313 CGAGGGGGAAAGGGGTGC 62.426 72.222 0.00 0.00 0.00 5.01
897 952 0.814812 GCAGCAGCAAGATCTCTCCC 60.815 60.000 0.00 0.00 41.58 4.30
898 953 0.814812 GGCAGCAGCAAGATCTCTCC 60.815 60.000 2.65 0.00 44.61 3.71
899 954 1.152989 CGGCAGCAGCAAGATCTCTC 61.153 60.000 2.65 0.00 44.61 3.20
900 955 1.153409 CGGCAGCAGCAAGATCTCT 60.153 57.895 2.65 0.00 44.61 3.10
917 972 0.877649 ATAGATGAAGCGGCACTGCG 60.878 55.000 1.45 0.00 40.67 5.18
920 975 1.418334 AGGATAGATGAAGCGGCACT 58.582 50.000 1.45 0.00 0.00 4.40
922 977 1.811558 GCAAGGATAGATGAAGCGGCA 60.812 52.381 1.45 0.00 0.00 5.69
923 978 0.871057 GCAAGGATAGATGAAGCGGC 59.129 55.000 0.00 0.00 0.00 6.53
924 979 1.517242 GGCAAGGATAGATGAAGCGG 58.483 55.000 0.00 0.00 0.00 5.52
926 981 1.517242 CGGGCAAGGATAGATGAAGC 58.483 55.000 0.00 0.00 0.00 3.86
927 982 1.517242 GCGGGCAAGGATAGATGAAG 58.483 55.000 0.00 0.00 0.00 3.02
928 983 0.249868 CGCGGGCAAGGATAGATGAA 60.250 55.000 0.00 0.00 0.00 2.57
929 984 1.112916 TCGCGGGCAAGGATAGATGA 61.113 55.000 6.13 0.00 0.00 2.92
930 985 0.249868 TTCGCGGGCAAGGATAGATG 60.250 55.000 6.13 0.00 0.00 2.90
931 986 0.034059 CTTCGCGGGCAAGGATAGAT 59.966 55.000 6.13 0.00 0.00 1.98
932 987 1.441729 CTTCGCGGGCAAGGATAGA 59.558 57.895 6.13 0.00 0.00 1.98
933 988 2.247437 GCTTCGCGGGCAAGGATAG 61.247 63.158 17.27 0.00 0.00 2.08
934 989 2.203015 GCTTCGCGGGCAAGGATA 60.203 61.111 17.27 0.00 0.00 2.59
1023 1093 4.144703 GGGTTCTCGTCCTCGGCC 62.145 72.222 0.00 0.00 37.69 6.13
1029 1099 3.703127 AAGCCCGGGTTCTCGTCC 61.703 66.667 24.63 1.65 0.00 4.79
1591 1661 2.456119 CGCACCTGATCGTCTTGGC 61.456 63.158 0.00 0.00 0.00 4.52
1623 1693 1.157585 GAGTCAAAGAAACGGGAGCC 58.842 55.000 0.00 0.00 0.00 4.70
1624 1694 2.171341 AGAGTCAAAGAAACGGGAGC 57.829 50.000 0.00 0.00 0.00 4.70
1630 1700 1.266989 CCCCGCAAGAGTCAAAGAAAC 59.733 52.381 0.00 0.00 43.02 2.78
1640 1710 4.722700 CACCCACCCCCGCAAGAG 62.723 72.222 0.00 0.00 43.02 2.85
1663 1736 4.692475 CCACCCCGACGGTCCAAC 62.692 72.222 13.94 0.00 43.58 3.77
1692 2054 2.721167 CGATCGGGGTCTCCAGCAA 61.721 63.158 7.38 0.00 34.36 3.91
1695 2061 1.448922 GAGTCGATCGGGGTCTCCAG 61.449 65.000 16.41 0.00 34.36 3.86
1709 2075 4.203076 CTAACGGCCGGGGAGTCG 62.203 72.222 31.76 6.27 0.00 4.18
1710 2076 3.846430 CCTAACGGCCGGGGAGTC 61.846 72.222 31.76 0.00 0.00 3.36
1711 2077 4.387343 TCCTAACGGCCGGGGAGT 62.387 66.667 31.76 11.37 0.00 3.85
1712 2078 3.537874 CTCCTAACGGCCGGGGAG 61.538 72.222 33.19 33.19 39.22 4.30
1713 2079 3.384555 ATCTCCTAACGGCCGGGGA 62.385 63.158 31.76 28.68 33.54 4.81
1714 2080 2.842936 ATCTCCTAACGGCCGGGG 60.843 66.667 31.76 26.26 0.00 5.73
1715 2081 2.421739 CATCTCCTAACGGCCGGG 59.578 66.667 31.76 21.46 0.00 5.73
1716 2082 2.421739 CCATCTCCTAACGGCCGG 59.578 66.667 31.76 11.94 0.00 6.13
1717 2083 2.280186 GCCATCTCCTAACGGCCG 60.280 66.667 26.86 26.86 38.67 6.13
1718 2084 0.815615 CAAGCCATCTCCTAACGGCC 60.816 60.000 0.00 0.00 46.08 6.13
1719 2085 1.440145 GCAAGCCATCTCCTAACGGC 61.440 60.000 0.00 0.00 45.23 5.68
1720 2086 0.815615 GGCAAGCCATCTCCTAACGG 60.816 60.000 6.14 0.00 35.81 4.44
1721 2087 0.815615 GGGCAAGCCATCTCCTAACG 60.816 60.000 13.87 0.00 37.98 3.18
1739 2105 5.231568 AGACGCTAGAAAATAAATTCGTCGG 59.768 40.000 0.00 0.00 46.38 4.79
1741 2107 8.166706 TGAAAGACGCTAGAAAATAAATTCGTC 58.833 33.333 0.00 0.00 43.46 4.20
1742 2108 8.025243 TGAAAGACGCTAGAAAATAAATTCGT 57.975 30.769 0.00 0.00 34.46 3.85
1754 2120 5.408604 GGATTGTTCTTTGAAAGACGCTAGA 59.591 40.000 7.21 0.00 37.23 2.43
1755 2121 5.409826 AGGATTGTTCTTTGAAAGACGCTAG 59.590 40.000 7.21 0.00 37.23 3.42
1756 2122 5.179368 CAGGATTGTTCTTTGAAAGACGCTA 59.821 40.000 7.21 1.69 37.23 4.26
1757 2123 4.023707 CAGGATTGTTCTTTGAAAGACGCT 60.024 41.667 7.21 0.00 37.23 5.07
1759 2125 4.023707 AGCAGGATTGTTCTTTGAAAGACG 60.024 41.667 7.21 0.00 37.23 4.18
1760 2126 5.444663 AGCAGGATTGTTCTTTGAAAGAC 57.555 39.130 7.21 4.11 37.23 3.01
1761 2127 6.207417 CCTAAGCAGGATTGTTCTTTGAAAGA 59.793 38.462 3.02 3.02 45.91 2.52
1762 2128 6.207417 TCCTAAGCAGGATTGTTCTTTGAAAG 59.793 38.462 0.00 0.00 46.58 2.62
1763 2129 6.068010 TCCTAAGCAGGATTGTTCTTTGAAA 58.932 36.000 0.00 0.00 46.58 2.69
1782 2148 0.530744 CTATAGCGCCGCCATCCTAA 59.469 55.000 4.98 0.00 0.00 2.69
1789 2155 0.458716 GGAGAATCTATAGCGCCGCC 60.459 60.000 4.98 0.00 33.73 6.13
1791 2157 1.178276 AGGGAGAATCTATAGCGCCG 58.822 55.000 2.29 0.00 33.73 6.46
1794 2160 4.498345 GGCGATTAGGGAGAATCTATAGCG 60.498 50.000 0.00 0.00 34.26 4.26
1807 2206 3.545703 ACATCTTTTGAGGCGATTAGGG 58.454 45.455 0.00 0.00 32.79 3.53
1809 2208 4.330074 ACGAACATCTTTTGAGGCGATTAG 59.670 41.667 0.00 0.00 32.79 1.73
1821 2220 4.036262 TGCTGCTAAACAACGAACATCTTT 59.964 37.500 0.00 0.00 0.00 2.52
1830 2229 3.421888 GTGTCAAATGCTGCTAAACAACG 59.578 43.478 0.00 0.00 0.00 4.10
1831 2230 4.610945 AGTGTCAAATGCTGCTAAACAAC 58.389 39.130 0.00 0.00 0.00 3.32
1832 2231 4.261572 GGAGTGTCAAATGCTGCTAAACAA 60.262 41.667 0.00 0.00 0.00 2.83
1834 2233 3.366374 GGGAGTGTCAAATGCTGCTAAAC 60.366 47.826 0.00 0.00 0.00 2.01
1835 2234 2.819608 GGGAGTGTCAAATGCTGCTAAA 59.180 45.455 0.00 0.00 0.00 1.85
1837 2236 1.340017 GGGGAGTGTCAAATGCTGCTA 60.340 52.381 0.00 0.00 0.00 3.49
1838 2237 0.610232 GGGGAGTGTCAAATGCTGCT 60.610 55.000 0.00 0.00 0.00 4.24
1839 2238 0.895100 TGGGGAGTGTCAAATGCTGC 60.895 55.000 0.00 0.00 0.00 5.25
1841 2240 0.773644 AGTGGGGAGTGTCAAATGCT 59.226 50.000 0.00 0.00 0.00 3.79
1842 2241 1.541588 GAAGTGGGGAGTGTCAAATGC 59.458 52.381 0.00 0.00 0.00 3.56
1854 2253 4.157656 TCTTTTATGCAAATCGAAGTGGGG 59.842 41.667 0.00 0.00 0.00 4.96
1856 2255 7.816945 AAATCTTTTATGCAAATCGAAGTGG 57.183 32.000 0.00 0.00 0.00 4.00
1857 2256 8.914654 TCAAAATCTTTTATGCAAATCGAAGTG 58.085 29.630 0.00 0.00 0.00 3.16
1887 2286 6.254157 CGGAAAAATCGACTTAGACCGAAATA 59.746 38.462 11.54 0.00 40.16 1.40
1888 2287 5.063060 CGGAAAAATCGACTTAGACCGAAAT 59.937 40.000 11.54 0.00 40.16 2.17
1889 2288 4.386652 CGGAAAAATCGACTTAGACCGAAA 59.613 41.667 11.54 0.00 40.16 3.46
1895 2295 4.524316 TGGACGGAAAAATCGACTTAGA 57.476 40.909 0.00 0.00 0.00 2.10
1898 2298 3.190535 CCATTGGACGGAAAAATCGACTT 59.809 43.478 0.00 0.00 0.00 3.01
1918 2319 0.243365 GATTTGACGCCATTGCACCA 59.757 50.000 0.00 0.00 37.32 4.17
1928 2329 6.753897 AAAAGTGAAATCAAGATTTGACGC 57.246 33.333 15.85 8.74 45.37 5.19
1976 2380 2.228103 CTGAGCTCAAGCAAGCAATCAA 59.772 45.455 18.85 0.00 45.00 2.57
1980 2384 1.954528 GCTGAGCTCAAGCAAGCAA 59.045 52.632 24.34 0.00 46.03 3.91
1996 2400 4.379339 GATCTGTAAAGAAGGTCGAGCT 57.621 45.455 12.24 12.24 0.00 4.09
2001 2405 2.605366 GCTGCGATCTGTAAAGAAGGTC 59.395 50.000 0.00 0.00 0.00 3.85
2002 2406 2.028112 TGCTGCGATCTGTAAAGAAGGT 60.028 45.455 0.00 0.00 0.00 3.50
2004 2408 3.257393 AGTGCTGCGATCTGTAAAGAAG 58.743 45.455 0.00 0.00 0.00 2.85
2012 2419 1.005340 GAAGGAAGTGCTGCGATCTG 58.995 55.000 0.00 0.00 0.00 2.90
2070 2477 5.587844 AGCCTTGCTACAACTTGATCAATAG 59.412 40.000 8.96 8.84 36.99 1.73
2097 2504 9.574516 AGGTTATTGAACTTTGTAATTCAGACT 57.425 29.630 0.00 0.00 36.26 3.24
2101 2508 9.567776 TCAGAGGTTATTGAACTTTGTAATTCA 57.432 29.630 0.00 0.00 35.74 2.57
2125 2532 1.771854 TGGTTAAACTCTGGCCTGTCA 59.228 47.619 3.32 0.00 0.00 3.58
2129 2536 3.306472 TGTTTGGTTAAACTCTGGCCT 57.694 42.857 3.32 0.00 45.06 5.19
2191 2598 6.613755 AAGCGTAGTCAAAATAGTGTTTGT 57.386 33.333 0.00 0.00 39.16 2.83
2193 2600 8.780249 ACATTAAGCGTAGTCAAAATAGTGTTT 58.220 29.630 0.00 0.00 0.00 2.83
2209 2616 3.128589 CCACCTTTATGCACATTAAGCGT 59.871 43.478 4.28 2.25 35.08 5.07
2221 2628 2.233922 ACTCCGTGAGACCACCTTTATG 59.766 50.000 7.76 0.00 40.12 1.90
2222 2629 2.537143 ACTCCGTGAGACCACCTTTAT 58.463 47.619 7.76 0.00 40.12 1.40
2226 2633 1.186267 GGAACTCCGTGAGACCACCT 61.186 60.000 7.76 0.00 40.12 4.00
2229 2636 0.471211 AAGGGAACTCCGTGAGACCA 60.471 55.000 7.76 0.00 42.68 4.02
2236 2643 5.945144 TTAAGCTATTAAGGGAACTCCGT 57.055 39.130 0.00 0.00 42.68 4.69
2251 2658 3.603158 TTGGTGCGTGAGATTAAGCTA 57.397 42.857 0.00 0.00 0.00 3.32
2274 2681 4.759693 ACACGAACAGATCCATTTTTGCTA 59.240 37.500 0.00 0.00 0.00 3.49
2300 2707 7.609146 GGAGGCAGTAAATATGATCAATGATGA 59.391 37.037 0.00 0.00 40.57 2.92
2303 2710 6.840527 TGGAGGCAGTAAATATGATCAATGA 58.159 36.000 0.00 0.00 0.00 2.57
2304 2711 7.514784 TTGGAGGCAGTAAATATGATCAATG 57.485 36.000 0.00 0.00 0.00 2.82
2305 2712 8.000709 TCTTTGGAGGCAGTAAATATGATCAAT 58.999 33.333 0.00 0.00 0.00 2.57
2306 2713 7.345691 TCTTTGGAGGCAGTAAATATGATCAA 58.654 34.615 0.00 0.00 0.00 2.57
2321 2728 2.092212 TGGAGATGGATTCTTTGGAGGC 60.092 50.000 0.00 0.00 33.74 4.70
2347 2754 7.766278 GCTTTACAGAGAACTGATCTTCCAATA 59.234 37.037 0.00 0.00 46.03 1.90
2350 2757 5.482908 GCTTTACAGAGAACTGATCTTCCA 58.517 41.667 0.00 0.00 46.03 3.53
2356 2763 6.701145 TCTATCGCTTTACAGAGAACTGAT 57.299 37.500 0.00 0.00 46.03 2.90
2382 2789 4.729868 ACTTTCTGCTTGTATGGAAGGTT 58.270 39.130 0.00 0.00 0.00 3.50
2383 2790 4.373156 ACTTTCTGCTTGTATGGAAGGT 57.627 40.909 0.00 0.00 0.00 3.50
2399 2806 6.150809 AGGAATGCTCTTGAATCTGAACTTTC 59.849 38.462 0.00 0.00 0.00 2.62
2428 2835 4.502962 GCAGATGCAGAGTACTTTTCTCT 58.497 43.478 0.00 0.00 42.16 3.10
2443 2850 6.144080 GCATTATTTTCTCTTCATGCAGATGC 59.856 38.462 0.00 0.00 37.54 3.91
2444 2851 7.426410 AGCATTATTTTCTCTTCATGCAGATG 58.574 34.615 0.00 0.00 39.62 2.90
2445 2852 7.255520 GGAGCATTATTTTCTCTTCATGCAGAT 60.256 37.037 0.00 0.00 39.62 2.90
2464 2871 1.000163 CGCGATAGTACTGGGAGCATT 60.000 52.381 0.00 0.00 39.35 3.56
2468 2875 2.219458 TCTTCGCGATAGTACTGGGAG 58.781 52.381 10.88 0.00 39.35 4.30
2470 2877 2.543238 GGTTCTTCGCGATAGTACTGGG 60.543 54.545 10.88 0.00 39.35 4.45
2478 2885 1.537348 CCGGAATGGTTCTTCGCGATA 60.537 52.381 10.88 0.00 0.00 2.92
2482 2889 2.038269 TGCCGGAATGGTTCTTCGC 61.038 57.895 5.05 0.00 41.21 4.70
2516 2923 1.101331 ATCGACGGGTCTTGGACTAC 58.899 55.000 0.00 0.00 32.47 2.73
2517 2924 1.100510 CATCGACGGGTCTTGGACTA 58.899 55.000 0.00 0.00 32.47 2.59
2574 3002 1.662517 CAACTGTACACACACTGCCA 58.337 50.000 0.00 0.00 0.00 4.92
2575 3003 0.944386 CCAACTGTACACACACTGCC 59.056 55.000 0.00 0.00 0.00 4.85
2588 3016 2.862536 CGTATGAGCATCTGTCCAACTG 59.137 50.000 0.00 0.00 34.92 3.16
2605 3033 4.936802 AGGGGAAGCATACTATCTCGTAT 58.063 43.478 0.00 0.00 0.00 3.06
2620 3048 0.313987 GCGACCAAAACAAGGGGAAG 59.686 55.000 0.00 0.00 0.00 3.46
2632 3060 3.629855 TCAAAAACTCAGATTGCGACCAA 59.370 39.130 0.00 0.00 35.01 3.67
2647 3075 5.278022 GGACTCATTGGTGACTCTCAAAAAC 60.278 44.000 0.00 0.00 0.00 2.43
2648 3076 4.821805 GGACTCATTGGTGACTCTCAAAAA 59.178 41.667 0.00 0.00 0.00 1.94
2655 3083 2.839486 TGTGGACTCATTGGTGACTC 57.161 50.000 0.00 0.00 0.00 3.36
2656 3084 4.287067 AGTTATGTGGACTCATTGGTGACT 59.713 41.667 0.00 0.00 0.00 3.41
2658 3086 4.908601 AGTTATGTGGACTCATTGGTGA 57.091 40.909 0.00 0.00 0.00 4.02
2673 3101 5.705441 TCAAGGAGCTTTGTGGTTAGTTATG 59.295 40.000 0.00 0.00 0.00 1.90
2681 3109 1.680338 GTGTCAAGGAGCTTTGTGGT 58.320 50.000 0.00 0.00 0.00 4.16
2683 3111 1.972872 AGGTGTCAAGGAGCTTTGTG 58.027 50.000 0.00 0.00 0.00 3.33
2685 3113 2.575532 TGAAGGTGTCAAGGAGCTTTG 58.424 47.619 0.00 0.00 31.38 2.77
2703 3131 4.968553 AGGTCCCTCCTTCGTTGA 57.031 55.556 0.00 0.00 45.67 3.18
2723 3151 2.039746 ACCGAAATGAAGTGACCCATGA 59.960 45.455 0.00 0.00 0.00 3.07
2731 3159 1.336440 TGGCACAACCGAAATGAAGTG 59.664 47.619 0.00 0.00 43.94 3.16
2770 3198 5.070847 TGAGATTGATAGGTGCATGCTCTTA 59.929 40.000 20.33 16.33 0.00 2.10
2805 3233 1.676635 TGGCTGCTGAATGTGCTCC 60.677 57.895 0.00 0.00 0.00 4.70
2806 3234 0.959372 AGTGGCTGCTGAATGTGCTC 60.959 55.000 0.00 0.00 0.00 4.26
2821 3249 1.956477 CAAAACACAGGAAGGGAGTGG 59.044 52.381 0.00 0.00 37.58 4.00
2833 3261 4.229304 TCTGGAAGAGGTTCAAAACACA 57.771 40.909 0.00 0.00 38.67 3.72
2861 3289 0.538118 ATGCAATTGAATTGGCGGCT 59.462 45.000 18.52 0.00 40.57 5.52
2911 3339 0.733729 CTTTCCATGCTCTCTGCTGC 59.266 55.000 0.00 0.00 43.37 5.25
2919 3347 1.734465 CGGAAGACACTTTCCATGCTC 59.266 52.381 5.71 0.00 45.66 4.26
2926 3354 3.378339 TCGAGAAACGGAAGACACTTTC 58.622 45.455 0.00 0.00 42.82 2.62
2929 3357 3.662247 AATCGAGAAACGGAAGACACT 57.338 42.857 0.00 0.00 42.82 3.55
2938 3366 3.424433 GCCCTGTTTGTAATCGAGAAACG 60.424 47.826 0.00 0.00 42.79 3.60
2971 3399 7.396418 ACAAATATAAACGGGGTCTTGAGTTA 58.604 34.615 0.00 0.00 0.00 2.24
2980 3408 3.697542 GGCAGAACAAATATAAACGGGGT 59.302 43.478 0.00 0.00 0.00 4.95
3075 3503 6.147164 GCGTAGTTGCTGGCAGATTATAATTA 59.853 38.462 20.86 3.30 0.00 1.40
3076 3504 5.049405 GCGTAGTTGCTGGCAGATTATAATT 60.049 40.000 20.86 4.21 0.00 1.40
3077 3505 4.452455 GCGTAGTTGCTGGCAGATTATAAT 59.548 41.667 20.86 0.00 0.00 1.28
3078 3506 3.807622 GCGTAGTTGCTGGCAGATTATAA 59.192 43.478 20.86 1.63 0.00 0.98
3079 3507 3.390135 GCGTAGTTGCTGGCAGATTATA 58.610 45.455 20.86 2.15 0.00 0.98
3080 3508 2.213499 GCGTAGTTGCTGGCAGATTAT 58.787 47.619 20.86 3.21 0.00 1.28
3121 3549 1.755959 AGATCGACAGCTCAAGCATCT 59.244 47.619 4.59 0.74 45.16 2.90
3156 3584 1.687123 AGTCGGCGTATAATCTTGCCT 59.313 47.619 6.85 0.00 45.36 4.75
3157 3585 2.150397 AGTCGGCGTATAATCTTGCC 57.850 50.000 6.85 0.00 44.09 4.52
3194 3622 3.406595 CTTGGGGGCCGGCTAGAAG 62.407 68.421 28.56 18.36 0.00 2.85
3228 3656 3.685139 TCAAAGCTTCACCTAGACCAG 57.315 47.619 0.00 0.00 0.00 4.00
3230 3658 5.473504 TGAAAATCAAAGCTTCACCTAGACC 59.526 40.000 0.00 0.00 0.00 3.85
3235 3663 9.428097 GAAATATTGAAAATCAAAGCTTCACCT 57.572 29.630 0.00 0.00 40.12 4.00
3265 3693 4.469586 TCAGCCTTCTTACCATGTGACATA 59.530 41.667 0.00 0.00 0.00 2.29
3280 3708 1.242076 ACACACTGCATTCAGCCTTC 58.758 50.000 0.00 0.00 44.10 3.46
3286 3714 4.582240 TGGAATGTTAACACACTGCATTCA 59.418 37.500 11.22 0.00 44.04 2.57
3289 3717 3.058293 CGTGGAATGTTAACACACTGCAT 60.058 43.478 19.62 0.00 32.76 3.96
3292 3720 3.059188 GGTCGTGGAATGTTAACACACTG 60.059 47.826 19.62 14.77 35.03 3.66
3313 3741 1.134367 CAGCTGCTGAATGACAATGGG 59.866 52.381 24.88 0.00 32.44 4.00
3314 3742 2.089201 TCAGCTGCTGAATGACAATGG 58.911 47.619 28.72 0.00 37.57 3.16
3365 3793 7.633553 GCCCTTTTCATATAAGCCAATTTCTGT 60.634 37.037 0.00 0.00 0.00 3.41
3370 3798 5.218959 AGGCCCTTTTCATATAAGCCAATT 58.781 37.500 0.00 0.00 41.45 2.32
3412 3840 7.201705 GGAGACGGGAAAAGTATTAGAATTTGG 60.202 40.741 0.00 0.00 0.00 3.28
3448 3876 7.100458 TGAATTGCTAAAGAAGGGCTTAATC 57.900 36.000 0.00 0.00 35.24 1.75
3460 3888 8.044060 TCAGTTATGGTCTTGAATTGCTAAAG 57.956 34.615 0.00 0.00 0.00 1.85
3466 3894 6.750501 CAGCAATCAGTTATGGTCTTGAATTG 59.249 38.462 0.00 0.00 0.00 2.32
3469 3897 5.316167 ACAGCAATCAGTTATGGTCTTGAA 58.684 37.500 0.00 0.00 0.00 2.69
3496 3924 1.453155 CAGGGAATGGGTCTTCAACG 58.547 55.000 0.00 0.00 0.00 4.10
3521 3949 5.405935 AATGGGAAGTTGGAAAATACTGC 57.594 39.130 0.00 0.00 0.00 4.40
3528 3956 2.961531 TCCGAATGGGAAGTTGGAAA 57.038 45.000 0.00 0.00 43.62 3.13
3538 3966 6.430925 TGAAGAGCAAATATTATCCGAATGGG 59.569 38.462 0.00 0.00 35.24 4.00
3545 3973 8.462016 ACAACTGTTGAAGAGCAAATATTATCC 58.538 33.333 26.00 0.00 38.44 2.59
3568 3996 2.105984 GGACAGCTTGTGTGCACAA 58.894 52.632 23.59 15.73 46.49 3.33
3577 4005 1.153549 GACTAGGCCGGACAGCTTG 60.154 63.158 11.69 0.00 0.00 4.01
3579 4007 2.037367 TGACTAGGCCGGACAGCT 59.963 61.111 11.69 0.00 0.00 4.24
3583 4011 1.734748 GCTACTGACTAGGCCGGAC 59.265 63.158 5.05 0.00 0.00 4.79
3627 4055 7.670009 AGAGACTTCAGAATGTTCAATCAAG 57.330 36.000 0.00 0.00 37.40 3.02
3646 4074 1.375013 TGGCGCCGGTTTTAGAGAC 60.375 57.895 23.90 0.00 0.00 3.36
3652 4080 1.528776 TAAAGGTGGCGCCGGTTTT 60.529 52.632 23.90 21.90 43.70 2.43
3653 4081 2.113562 TAAAGGTGGCGCCGGTTT 59.886 55.556 23.90 21.68 43.70 3.27
3664 4092 1.956477 CAGCAGCCAAAGTGTAAAGGT 59.044 47.619 0.00 0.00 0.00 3.50
3684 4112 4.566759 TGCGATAATGAGTGCAGAAACTAC 59.433 41.667 0.00 0.00 32.73 2.73
3685 4113 4.754322 TGCGATAATGAGTGCAGAAACTA 58.246 39.130 0.00 0.00 32.73 2.24
3694 4122 8.966194 CATATCTAGCTAATGCGATAATGAGTG 58.034 37.037 0.00 0.00 45.42 3.51
3695 4123 8.690884 ACATATCTAGCTAATGCGATAATGAGT 58.309 33.333 4.17 0.69 45.42 3.41
3700 4128 9.397280 AGTCTACATATCTAGCTAATGCGATAA 57.603 33.333 4.17 0.00 45.42 1.75
3701 4129 8.966069 AGTCTACATATCTAGCTAATGCGATA 57.034 34.615 4.17 3.89 45.42 2.92
3702 4130 7.873719 AGTCTACATATCTAGCTAATGCGAT 57.126 36.000 4.17 1.88 45.42 4.58
3804 4280 5.693769 TTTAGCTCACTATTTACTGGCCT 57.306 39.130 3.32 0.00 0.00 5.19
3805 4281 5.220605 CGTTTTAGCTCACTATTTACTGGCC 60.221 44.000 0.00 0.00 0.00 5.36
3807 4283 6.812160 AGACGTTTTAGCTCACTATTTACTGG 59.188 38.462 0.00 0.00 0.00 4.00
3808 4284 7.813852 AGACGTTTTAGCTCACTATTTACTG 57.186 36.000 0.00 0.00 0.00 2.74
3964 4463 4.695455 TGTAGAGTGTTATTTTGCTCAGGC 59.305 41.667 0.00 0.00 39.26 4.85
4103 4602 8.451748 GGAACACATAATCTTACTTGAAAGGAC 58.548 37.037 0.00 0.00 0.00 3.85
4160 4659 4.024048 CACACGAAAACTTAAGCATCAGGT 60.024 41.667 1.29 0.00 0.00 4.00
4165 4664 3.980646 TGCACACGAAAACTTAAGCAT 57.019 38.095 1.29 0.00 0.00 3.79
4279 4782 5.584442 ACGGACTGAAATGGTTAAAAACAC 58.416 37.500 0.00 0.00 0.00 3.32
4415 4920 5.556915 CATGGAAAGTAGTACCTTCCACAA 58.443 41.667 28.06 12.06 30.08 3.33
4520 5025 3.649073 CCACACTCGTCACACTGAAATA 58.351 45.455 0.00 0.00 0.00 1.40
4661 5170 9.173021 TGTGAGTTATATGTCAGGGTAAATTTG 57.827 33.333 0.00 0.00 0.00 2.32
4690 5199 9.653287 TCAAGAGTGTGAGGTACAATAATTAAG 57.347 33.333 0.00 0.00 41.89 1.85
4693 5202 9.520515 AAATCAAGAGTGTGAGGTACAATAATT 57.479 29.630 0.00 0.00 41.89 1.40
4696 5205 8.375506 AGAAAATCAAGAGTGTGAGGTACAATA 58.624 33.333 0.00 0.00 41.89 1.90
4710 5233 3.748048 TGTGCGAGGAAGAAAATCAAGAG 59.252 43.478 0.00 0.00 0.00 2.85
4715 5238 4.467735 GACTTTGTGCGAGGAAGAAAATC 58.532 43.478 0.00 0.00 0.00 2.17
4719 5242 1.067974 TCGACTTTGTGCGAGGAAGAA 59.932 47.619 0.00 0.00 32.13 2.52
4721 5244 0.784778 GTCGACTTTGTGCGAGGAAG 59.215 55.000 8.70 0.00 37.18 3.46
4724 5249 0.508641 CTTGTCGACTTTGTGCGAGG 59.491 55.000 17.92 0.00 37.18 4.63
4752 5277 1.072965 ACCCAGAGTTCAAGCCTTCAG 59.927 52.381 0.00 0.00 0.00 3.02
4784 5309 7.900782 AATGATTCAGAGGCAAATTTCAAAG 57.099 32.000 0.00 0.00 0.00 2.77
4839 5364 4.818534 AACAAACGGCATATGCATCTAG 57.181 40.909 28.07 16.56 44.36 2.43
4887 5412 9.871238 TGAAAGTAAACATTATCTAGAGACACC 57.129 33.333 0.00 0.00 0.00 4.16
4903 5436 7.169140 CCAGGCAAACATTAGTTGAAAGTAAAC 59.831 37.037 0.00 0.00 38.17 2.01
4926 5459 4.821805 ACATACACCTTTGAAGTTCACCAG 59.178 41.667 4.68 4.73 0.00 4.00
4933 5493 6.119536 TCTCAAACACATACACCTTTGAAGT 58.880 36.000 0.00 0.00 33.39 3.01
4934 5494 6.618287 TCTCAAACACATACACCTTTGAAG 57.382 37.500 0.00 0.00 33.39 3.02
4935 5495 7.397892 TTTCTCAAACACATACACCTTTGAA 57.602 32.000 0.00 0.00 33.39 2.69
4936 5496 7.122055 AGTTTTCTCAAACACATACACCTTTGA 59.878 33.333 0.96 0.00 44.32 2.69
4937 5497 7.257722 AGTTTTCTCAAACACATACACCTTTG 58.742 34.615 0.96 0.00 44.32 2.77
4938 5498 7.404671 AGTTTTCTCAAACACATACACCTTT 57.595 32.000 0.96 0.00 44.32 3.11
4939 5499 7.122055 TGAAGTTTTCTCAAACACATACACCTT 59.878 33.333 0.96 0.00 44.32 3.50
4940 5500 6.601613 TGAAGTTTTCTCAAACACATACACCT 59.398 34.615 0.96 0.00 44.32 4.00
4941 5501 6.791303 TGAAGTTTTCTCAAACACATACACC 58.209 36.000 0.96 0.00 44.32 4.16
4942 5502 8.682128 TTTGAAGTTTTCTCAAACACATACAC 57.318 30.769 0.96 0.00 44.32 2.90
4943 5503 7.973388 CCTTTGAAGTTTTCTCAAACACATACA 59.027 33.333 0.96 0.00 44.32 2.29
4944 5504 7.973944 ACCTTTGAAGTTTTCTCAAACACATAC 59.026 33.333 0.96 0.00 44.32 2.39
4945 5505 7.973388 CACCTTTGAAGTTTTCTCAAACACATA 59.027 33.333 0.96 0.00 44.32 2.29
4946 5506 6.813152 CACCTTTGAAGTTTTCTCAAACACAT 59.187 34.615 0.96 0.00 44.32 3.21
4947 5507 6.155827 CACCTTTGAAGTTTTCTCAAACACA 58.844 36.000 0.96 0.00 44.32 3.72
4948 5508 6.156519 ACACCTTTGAAGTTTTCTCAAACAC 58.843 36.000 0.96 0.00 44.32 3.32
4949 5509 6.339587 ACACCTTTGAAGTTTTCTCAAACA 57.660 33.333 0.96 0.00 44.32 2.83
4950 5510 8.807581 CAATACACCTTTGAAGTTTTCTCAAAC 58.192 33.333 0.00 0.00 42.48 2.93
4951 5511 8.744652 TCAATACACCTTTGAAGTTTTCTCAAA 58.255 29.630 0.00 0.00 30.44 2.69
4952 5512 8.188139 GTCAATACACCTTTGAAGTTTTCTCAA 58.812 33.333 0.00 0.00 35.03 3.02
4953 5513 7.556275 AGTCAATACACCTTTGAAGTTTTCTCA 59.444 33.333 0.00 0.00 35.03 3.27
4954 5514 7.857885 CAGTCAATACACCTTTGAAGTTTTCTC 59.142 37.037 0.00 0.00 35.03 2.87
4955 5515 7.556275 TCAGTCAATACACCTTTGAAGTTTTCT 59.444 33.333 0.00 0.00 35.03 2.52
4956 5516 7.703328 TCAGTCAATACACCTTTGAAGTTTTC 58.297 34.615 0.00 0.00 35.03 2.29
4957 5517 7.639113 TCAGTCAATACACCTTTGAAGTTTT 57.361 32.000 0.00 0.00 35.03 2.43
4958 5518 7.651808 CATCAGTCAATACACCTTTGAAGTTT 58.348 34.615 0.00 0.00 35.03 2.66
4959 5519 6.294176 GCATCAGTCAATACACCTTTGAAGTT 60.294 38.462 0.00 0.00 35.03 2.66
5008 5568 3.122278 CACCACGTATTTACCACGACAAG 59.878 47.826 1.43 0.00 41.91 3.16
5185 5745 4.261801 ACGGGACAGATTTTAGGTGAATG 58.738 43.478 0.00 0.00 0.00 2.67
5402 6160 9.260002 CAAGCACCTTATTTTTCACTTAATTGT 57.740 29.630 0.00 0.00 0.00 2.71
5403 6161 9.260002 ACAAGCACCTTATTTTTCACTTAATTG 57.740 29.630 0.00 0.00 0.00 2.32
5406 6164 7.777095 ACACAAGCACCTTATTTTTCACTTAA 58.223 30.769 0.00 0.00 0.00 1.85
5408 6166 6.127479 TGACACAAGCACCTTATTTTTCACTT 60.127 34.615 0.00 0.00 0.00 3.16
5410 6168 5.587289 TGACACAAGCACCTTATTTTTCAC 58.413 37.500 0.00 0.00 0.00 3.18
5411 6169 5.221224 CCTGACACAAGCACCTTATTTTTCA 60.221 40.000 0.00 0.00 0.00 2.69
5412 6170 5.009610 TCCTGACACAAGCACCTTATTTTTC 59.990 40.000 0.00 0.00 0.00 2.29
5435 6193 2.033424 GGTTTCAGTTTCAGTGCCACTC 59.967 50.000 0.00 0.00 0.00 3.51
5575 6333 8.850156 CCCTTAGTTGTATAGCATAAGCAAAAT 58.150 33.333 0.00 0.00 45.49 1.82
5607 6366 1.559682 ACTCCTGACACAAACACCTGT 59.440 47.619 0.00 0.00 0.00 4.00
5608 6367 1.942657 CACTCCTGACACAAACACCTG 59.057 52.381 0.00 0.00 0.00 4.00
5689 6475 2.389998 CACCAAGTTACGCGCAAAAAT 58.610 42.857 5.73 0.00 0.00 1.82
5812 6612 4.332683 TGGGGACTACTGTGAAGTCTAT 57.667 45.455 9.81 0.00 42.48 1.98
5851 6656 6.349300 AGTTGATATGGTAGCAAGTTACCTG 58.651 40.000 13.21 0.00 42.93 4.00
5862 6667 8.948631 AGTCATGTTGTAAGTTGATATGGTAG 57.051 34.615 0.00 0.00 0.00 3.18
5959 6813 3.966665 CCTTCTTCAGGGAGCTATTCTCT 59.033 47.826 0.00 0.00 41.60 3.10
5972 6826 0.795085 CTCTTGCGTGCCTTCTTCAG 59.205 55.000 0.00 0.00 0.00 3.02
6034 6888 4.082523 TGCTTTCTCCGAGGGGCG 62.083 66.667 0.00 0.00 40.47 6.13
6099 6965 1.134340 TGCCCAGTGACTTTACGTTGT 60.134 47.619 0.00 0.00 0.00 3.32
6103 6978 2.607187 CTACTGCCCAGTGACTTTACG 58.393 52.381 11.02 0.00 42.52 3.18
6105 6980 1.974957 TGCTACTGCCCAGTGACTTTA 59.025 47.619 11.02 0.00 42.52 1.85
6109 6984 1.376037 GGTGCTACTGCCCAGTGAC 60.376 63.158 11.02 5.18 42.52 3.67
6125 7000 1.636003 GTCATCCCCCTTCTTTGAGGT 59.364 52.381 0.00 0.00 34.88 3.85
6138 7013 1.198713 TGCCTTCTGAGAGTCATCCC 58.801 55.000 0.00 0.00 0.00 3.85
6139 7014 3.557228 ATTGCCTTCTGAGAGTCATCC 57.443 47.619 0.00 0.00 0.00 3.51
6206 7081 0.392863 TCCTCCGACGTAACCGATGA 60.393 55.000 0.00 0.00 37.88 2.92
6233 7108 2.992476 TCCTCCCCGGAGAGAAAAG 58.008 57.895 15.66 0.00 44.53 2.27
6244 7119 0.890683 CATTGTTGCAACTCCTCCCC 59.109 55.000 28.61 1.71 0.00 4.81
6309 7184 4.785767 CAGAAGGCTGCACACTGA 57.214 55.556 0.50 0.00 34.95 3.41
6324 7208 2.964740 TCGGTTTCTTCTGAGATGCAG 58.035 47.619 0.00 0.00 46.31 4.41
6480 7892 0.392461 GGCAGGCTGAACGGTTATCA 60.392 55.000 20.86 0.00 0.00 2.15
6481 7893 1.429148 CGGCAGGCTGAACGGTTATC 61.429 60.000 20.86 0.00 0.00 1.75
6637 8052 1.326213 CCGATCCACTGGAGCACTCT 61.326 60.000 13.73 0.00 38.11 3.24
6687 8102 0.793617 TTCCCTGTCCCTTCTCCTCT 59.206 55.000 0.00 0.00 0.00 3.69
6729 8144 1.153086 GCCTCCATGGAGCGTGAAT 60.153 57.895 32.97 0.00 40.69 2.57
6847 8403 2.357569 GGGAGGAGCAAGAACATCCATT 60.358 50.000 0.00 0.00 38.50 3.16
6881 8443 1.601171 CTCCAGGGTCTTCAGCCAG 59.399 63.158 0.00 0.00 43.42 4.85
6891 8453 2.284995 GACCTCCAGCTCCAGGGT 60.285 66.667 11.49 4.90 33.57 4.34
6935 8572 1.295423 CGGGAGGGATGACAACGTT 59.705 57.895 0.00 0.00 0.00 3.99
6971 8770 1.938577 CACGCTTGAAGATGGATCAGG 59.061 52.381 0.00 0.00 0.00 3.86
6983 8782 1.855213 GCAGCAATGTCCACGCTTGA 61.855 55.000 0.00 0.00 32.48 3.02
6989 8788 1.211969 CAGCAGCAGCAATGTCCAC 59.788 57.895 3.17 0.00 45.49 4.02
7028 8830 1.897615 GATCTGCATGGGCCTGAGC 60.898 63.158 4.53 6.79 40.13 4.26
7038 8840 0.616891 TGGCTGTGACTGATCTGCAT 59.383 50.000 0.00 0.00 0.00 3.96
7127 8929 4.827284 ACTTGTTGGATTTGGAGGTGTTAG 59.173 41.667 0.00 0.00 0.00 2.34
7132 8934 2.965147 CCAACTTGTTGGATTTGGAGGT 59.035 45.455 23.82 0.00 44.82 3.85
7146 8948 0.676466 TATCACGGCAGGCCAACTTG 60.676 55.000 5.01 0.00 35.37 3.16
7216 9032 5.478332 GGGAATTTAATCCAGGATAAGCAGG 59.522 44.000 1.02 0.00 41.55 4.85
7269 9085 7.148052 ACAGTGATAAGTTACTGCTAGTACCAG 60.148 40.741 0.00 0.00 46.27 4.00
7270 9086 6.662234 ACAGTGATAAGTTACTGCTAGTACCA 59.338 38.462 0.00 0.00 46.27 3.25
7271 9087 7.098074 ACAGTGATAAGTTACTGCTAGTACC 57.902 40.000 0.00 0.00 46.27 3.34
7272 9088 6.906143 CGACAGTGATAAGTTACTGCTAGTAC 59.094 42.308 0.00 0.00 46.27 2.73
7273 9089 6.596888 ACGACAGTGATAAGTTACTGCTAGTA 59.403 38.462 0.00 0.00 46.27 1.82
7274 9090 5.415077 ACGACAGTGATAAGTTACTGCTAGT 59.585 40.000 0.00 0.86 46.27 2.57
7275 9091 5.881447 ACGACAGTGATAAGTTACTGCTAG 58.119 41.667 0.00 0.00 46.27 3.42
7276 9092 5.892160 ACGACAGTGATAAGTTACTGCTA 57.108 39.130 0.00 0.00 46.27 3.49
7277 9093 4.785511 ACGACAGTGATAAGTTACTGCT 57.214 40.909 0.00 0.00 46.27 4.24
7278 9094 5.840940 AAACGACAGTGATAAGTTACTGC 57.159 39.130 0.00 0.00 46.27 4.40
7280 9096 6.307318 CGCTTAAACGACAGTGATAAGTTACT 59.693 38.462 0.00 0.00 35.11 2.24
7281 9097 6.088616 ACGCTTAAACGACAGTGATAAGTTAC 59.911 38.462 5.08 0.00 35.11 2.50
7282 9098 6.151691 ACGCTTAAACGACAGTGATAAGTTA 58.848 36.000 5.08 0.00 35.11 2.24
7283 9099 4.986659 ACGCTTAAACGACAGTGATAAGTT 59.013 37.500 5.08 0.00 35.11 2.66
7284 9100 4.553323 ACGCTTAAACGACAGTGATAAGT 58.447 39.130 5.08 0.00 35.11 2.24
7285 9101 4.258899 CGACGCTTAAACGACAGTGATAAG 60.259 45.833 5.08 0.00 35.44 1.73
7377 9194 5.588648 CAGGATGTTAATTTCGCCCTTTAGA 59.411 40.000 0.00 0.00 0.00 2.10
7380 9197 4.718940 CAGGATGTTAATTTCGCCCTTT 57.281 40.909 0.00 0.00 0.00 3.11
7417 9234 1.272490 CACAGAAAGGGAGTCGTAGCA 59.728 52.381 0.00 0.00 0.00 3.49
7428 9250 5.528690 TGTCTCAGAAAACATCACAGAAAGG 59.471 40.000 0.00 0.00 0.00 3.11
7437 9259 3.406764 AGCCAGTGTCTCAGAAAACATC 58.593 45.455 0.00 0.00 0.00 3.06
7440 9262 3.748568 CCTAAGCCAGTGTCTCAGAAAAC 59.251 47.826 0.00 0.00 0.00 2.43
7484 9306 5.231702 TCAACGTTACAATGCAGCTAACTA 58.768 37.500 0.00 0.00 0.00 2.24
7532 9356 0.436531 GCGAGCACAAGAAAGTCTCG 59.563 55.000 5.69 5.69 46.44 4.04
7587 9411 1.268352 GCAATGACCAGTAAAACCGCA 59.732 47.619 0.00 0.00 0.00 5.69
7593 9417 2.375174 AGGAGTGGCAATGACCAGTAAA 59.625 45.455 0.00 0.00 43.63 2.01
7703 9529 6.406370 TGGTCATGTCAAGATAATTTCGTCT 58.594 36.000 0.00 0.00 0.00 4.18
7848 9674 5.884232 GGAAATAGGACCATACCGTCTTTTT 59.116 40.000 0.00 0.00 33.07 1.94
7862 9830 4.856509 ACAAGGCCTTAAGGAAATAGGAC 58.143 43.478 26.21 4.32 37.34 3.85
7929 9897 3.081710 TGGCTTAGAAGGGGCTTAAAC 57.918 47.619 0.00 0.00 0.00 2.01
7942 9911 4.036380 GGATTGGGACGTATTTTGGCTTAG 59.964 45.833 0.00 0.00 0.00 2.18
7996 9965 7.571025 TCTTTTAGGGCTTAATCGGTTAATCT 58.429 34.615 0.41 3.22 0.00 2.40
8087 11121 1.330655 ACGAGGCCTTGGTGATCGAT 61.331 55.000 24.40 0.00 37.16 3.59
8102 11136 1.401552 CCCCAAACATGCATGTACGAG 59.598 52.381 31.55 19.84 40.80 4.18
8152 11186 6.575244 ATTTGAGACCACATATACAAGGGA 57.425 37.500 0.00 0.00 0.00 4.20
8158 11192 9.988815 AGAGATTGTATTTGAGACCACATATAC 57.011 33.333 0.00 0.00 36.22 1.47


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.