Multiple sequence alignment - TraesCS6B01G349600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G349600 chr6B 100.000 2456 0 0 1 2456 614437219 614434764 0.000000e+00 4536.0
1 TraesCS6B01G349600 chr6B 97.138 559 9 4 1 558 614582277 614581725 0.000000e+00 937.0
2 TraesCS6B01G349600 chr6B 95.872 533 15 6 1 528 614311909 614311379 0.000000e+00 856.0
3 TraesCS6B01G349600 chr6B 97.179 390 6 3 553 941 614581321 614580936 0.000000e+00 654.0
4 TraesCS6B01G349600 chr6B 85.256 312 25 10 80 370 636491732 636491421 3.970000e-78 302.0
5 TraesCS6B01G349600 chr6B 83.062 307 26 12 90 370 636585787 636586093 3.130000e-64 255.0
6 TraesCS6B01G349600 chr7B 98.750 1520 16 3 938 2456 587439125 587440642 0.000000e+00 2699.0
7 TraesCS6B01G349600 chr7B 80.077 261 40 9 1848 2097 8540640 8540381 1.500000e-42 183.0
8 TraesCS6B01G349600 chr4A 97.443 1525 10 3 938 2456 29300945 29299444 0.000000e+00 2573.0
9 TraesCS6B01G349600 chr4A 90.411 146 13 1 2311 2456 623679783 623679927 8.960000e-45 191.0
10 TraesCS6B01G349600 chr4A 86.986 146 18 1 2311 2456 623723052 623723196 1.950000e-36 163.0
11 TraesCS6B01G349600 chr1A 87.573 1537 125 35 937 2456 86010484 86011971 0.000000e+00 1720.0
12 TraesCS6B01G349600 chr1A 97.515 1006 16 7 930 1932 180415295 180414296 0.000000e+00 1711.0
13 TraesCS6B01G349600 chr1A 91.281 757 41 22 1710 2456 180414554 180413813 0.000000e+00 1009.0
14 TraesCS6B01G349600 chr1A 90.116 688 44 16 1013 1681 495448306 495448988 0.000000e+00 872.0
15 TraesCS6B01G349600 chr1A 89.362 141 14 1 2316 2456 569762752 569762891 2.510000e-40 176.0
16 TraesCS6B01G349600 chr6D 82.255 1375 151 42 942 2276 297430742 297429421 0.000000e+00 1101.0
17 TraesCS6B01G349600 chr6D 87.288 472 25 11 84 528 409346883 409346420 7.840000e-140 507.0
18 TraesCS6B01G349600 chr6D 89.529 191 14 1 93 277 422190824 422190634 1.140000e-58 237.0
19 TraesCS6B01G349600 chr6D 87.179 78 10 0 293 370 422190588 422190511 3.360000e-14 89.8
20 TraesCS6B01G349600 chr2A 88.168 955 57 26 938 1874 772954188 772955104 0.000000e+00 1086.0
21 TraesCS6B01G349600 chr2A 92.469 239 15 3 940 1176 33654619 33654382 3.030000e-89 339.0
22 TraesCS6B01G349600 chr5B 82.759 1334 117 57 939 2232 566071425 566072685 0.000000e+00 1085.0
23 TraesCS6B01G349600 chr7A 88.052 929 77 18 1390 2315 33074614 33075511 0.000000e+00 1070.0
24 TraesCS6B01G349600 chr6A 87.836 929 79 17 1391 2315 593993528 593994426 0.000000e+00 1059.0
25 TraesCS6B01G349600 chr6A 85.805 472 35 8 84 528 554824421 554823955 2.860000e-129 472.0
26 TraesCS6B01G349600 chr6A 89.231 195 14 2 85 272 564910569 564910763 1.140000e-58 237.0
27 TraesCS6B01G349600 chr6A 91.566 166 14 0 700 865 554823699 554823534 1.900000e-56 230.0
28 TraesCS6B01G349600 chr6A 85.648 216 23 3 80 287 564974954 564974739 1.140000e-53 220.0
29 TraesCS6B01G349600 chr6A 89.744 78 8 0 293 370 564974703 564974626 1.550000e-17 100.0
30 TraesCS6B01G349600 chr6A 98.077 52 1 0 319 370 564910848 564910899 9.350000e-15 91.6
31 TraesCS6B01G349600 chr5A 83.221 1037 100 38 1221 2219 662953166 662954166 0.000000e+00 883.0
32 TraesCS6B01G349600 chr5A 79.290 169 25 9 1710 1874 14252156 14252318 2.580000e-20 110.0
33 TraesCS6B01G349600 chr2D 87.299 685 42 19 1209 1877 647526249 647525594 0.000000e+00 741.0
34 TraesCS6B01G349600 chr5D 86.270 488 23 9 1221 1694 401325612 401325155 7.890000e-135 490.0
35 TraesCS6B01G349600 chr5D 90.213 235 19 2 939 1172 401326078 401325847 1.100000e-78 303.0
36 TraesCS6B01G349600 chr3A 87.416 445 19 8 1249 1683 702924319 702924736 6.140000e-131 477.0
37 TraesCS6B01G349600 chr3A 94.231 208 12 0 939 1146 702923810 702924017 3.940000e-83 318.0
38 TraesCS6B01G349600 chr2B 91.781 146 11 1 2311 2456 12285611 12285467 4.140000e-48 202.0
39 TraesCS6B01G349600 chr4B 87.075 147 15 4 2311 2456 656830476 656830333 1.950000e-36 163.0
40 TraesCS6B01G349600 chrUn 97.778 45 1 0 2412 2456 50017924 50017968 7.280000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G349600 chr6B 614434764 614437219 2455 True 4536.0 4536 100.0000 1 2456 1 chr6B.!!$R2 2455
1 TraesCS6B01G349600 chr6B 614311379 614311909 530 True 856.0 856 95.8720 1 528 1 chr6B.!!$R1 527
2 TraesCS6B01G349600 chr6B 614580936 614582277 1341 True 795.5 937 97.1585 1 941 2 chr6B.!!$R4 940
3 TraesCS6B01G349600 chr7B 587439125 587440642 1517 False 2699.0 2699 98.7500 938 2456 1 chr7B.!!$F1 1518
4 TraesCS6B01G349600 chr4A 29299444 29300945 1501 True 2573.0 2573 97.4430 938 2456 1 chr4A.!!$R1 1518
5 TraesCS6B01G349600 chr1A 86010484 86011971 1487 False 1720.0 1720 87.5730 937 2456 1 chr1A.!!$F1 1519
6 TraesCS6B01G349600 chr1A 180413813 180415295 1482 True 1360.0 1711 94.3980 930 2456 2 chr1A.!!$R1 1526
7 TraesCS6B01G349600 chr1A 495448306 495448988 682 False 872.0 872 90.1160 1013 1681 1 chr1A.!!$F2 668
8 TraesCS6B01G349600 chr6D 297429421 297430742 1321 True 1101.0 1101 82.2550 942 2276 1 chr6D.!!$R1 1334
9 TraesCS6B01G349600 chr2A 772954188 772955104 916 False 1086.0 1086 88.1680 938 1874 1 chr2A.!!$F1 936
10 TraesCS6B01G349600 chr5B 566071425 566072685 1260 False 1085.0 1085 82.7590 939 2232 1 chr5B.!!$F1 1293
11 TraesCS6B01G349600 chr7A 33074614 33075511 897 False 1070.0 1070 88.0520 1390 2315 1 chr7A.!!$F1 925
12 TraesCS6B01G349600 chr6A 593993528 593994426 898 False 1059.0 1059 87.8360 1391 2315 1 chr6A.!!$F1 924
13 TraesCS6B01G349600 chr6A 554823534 554824421 887 True 351.0 472 88.6855 84 865 2 chr6A.!!$R1 781
14 TraesCS6B01G349600 chr5A 662953166 662954166 1000 False 883.0 883 83.2210 1221 2219 1 chr5A.!!$F2 998
15 TraesCS6B01G349600 chr2D 647525594 647526249 655 True 741.0 741 87.2990 1209 1877 1 chr2D.!!$R1 668
16 TraesCS6B01G349600 chr5D 401325155 401326078 923 True 396.5 490 88.2415 939 1694 2 chr5D.!!$R1 755
17 TraesCS6B01G349600 chr3A 702923810 702924736 926 False 397.5 477 90.8235 939 1683 2 chr3A.!!$F1 744

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
402 404 0.03467 AAGTGATGGAGCCAGCCTTC 60.035 55.0 1.88 0.0 33.84 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2139 2563 0.320374 CCGTCCTCACCTGTAGCAAA 59.68 55.0 0.0 0.0 0.0 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 0.601046 ATACATGATCGCGGCACCTG 60.601 55.000 6.13 4.18 0.00 4.00
186 187 1.002430 TGTTCGCCATCTTCTTCAGCT 59.998 47.619 0.00 0.00 0.00 4.24
303 305 2.099062 GCGTGCTCGGCTTGAATG 59.901 61.111 10.52 0.00 37.56 2.67
304 306 2.099062 CGTGCTCGGCTTGAATGC 59.901 61.111 0.00 0.00 0.00 3.56
305 307 2.393768 CGTGCTCGGCTTGAATGCT 61.394 57.895 0.00 0.00 0.00 3.79
306 308 1.427020 GTGCTCGGCTTGAATGCTC 59.573 57.895 0.00 0.00 0.00 4.26
307 309 1.746615 TGCTCGGCTTGAATGCTCC 60.747 57.895 0.00 0.00 0.00 4.70
308 310 1.451028 GCTCGGCTTGAATGCTCCT 60.451 57.895 0.00 0.00 0.00 3.69
309 311 1.028868 GCTCGGCTTGAATGCTCCTT 61.029 55.000 0.00 0.00 0.00 3.36
310 312 1.457346 CTCGGCTTGAATGCTCCTTT 58.543 50.000 0.00 0.00 0.00 3.11
311 313 1.131883 CTCGGCTTGAATGCTCCTTTG 59.868 52.381 0.00 0.00 0.00 2.77
312 314 0.171903 CGGCTTGAATGCTCCTTTGG 59.828 55.000 0.00 0.00 0.00 3.28
313 315 0.533951 GGCTTGAATGCTCCTTTGGG 59.466 55.000 0.00 0.00 0.00 4.12
314 316 0.108472 GCTTGAATGCTCCTTTGGGC 60.108 55.000 0.00 0.00 0.00 5.36
315 317 0.533951 CTTGAATGCTCCTTTGGGCC 59.466 55.000 0.00 0.00 0.00 5.80
316 318 0.178938 TTGAATGCTCCTTTGGGCCA 60.179 50.000 0.00 0.00 0.00 5.36
317 319 0.612732 TGAATGCTCCTTTGGGCCAG 60.613 55.000 6.23 0.00 0.00 4.85
318 320 0.613012 GAATGCTCCTTTGGGCCAGT 60.613 55.000 6.23 0.00 0.00 4.00
319 321 0.901580 AATGCTCCTTTGGGCCAGTG 60.902 55.000 6.23 3.37 0.00 3.66
320 322 2.677875 GCTCCTTTGGGCCAGTGG 60.678 66.667 17.55 17.55 0.00 4.00
321 323 3.170362 CTCCTTTGGGCCAGTGGA 58.830 61.111 22.59 22.59 0.00 4.02
322 324 1.693640 CTCCTTTGGGCCAGTGGAT 59.306 57.895 23.71 0.00 0.00 3.41
323 325 0.918983 CTCCTTTGGGCCAGTGGATA 59.081 55.000 23.71 8.48 0.00 2.59
324 326 1.496429 CTCCTTTGGGCCAGTGGATAT 59.504 52.381 23.71 0.00 0.00 1.63
325 327 1.215173 TCCTTTGGGCCAGTGGATATG 59.785 52.381 20.94 3.09 0.00 1.78
326 328 1.063717 CCTTTGGGCCAGTGGATATGT 60.064 52.381 15.20 0.00 0.00 2.29
327 329 2.301346 CTTTGGGCCAGTGGATATGTC 58.699 52.381 15.20 0.00 0.00 3.06
328 330 0.180171 TTGGGCCAGTGGATATGTCG 59.820 55.000 15.20 0.00 0.00 4.35
329 331 1.071471 GGGCCAGTGGATATGTCGG 59.929 63.158 15.20 0.00 0.00 4.79
330 332 1.598130 GGCCAGTGGATATGTCGGC 60.598 63.158 15.20 0.00 38.85 5.54
331 333 1.598130 GCCAGTGGATATGTCGGCC 60.598 63.158 15.20 0.00 33.31 6.13
332 334 1.300931 CCAGTGGATATGTCGGCCG 60.301 63.158 22.12 22.12 0.00 6.13
333 335 1.300931 CAGTGGATATGTCGGCCGG 60.301 63.158 27.83 6.80 0.00 6.13
334 336 1.456892 AGTGGATATGTCGGCCGGA 60.457 57.895 27.83 13.31 0.00 5.14
335 337 1.006102 GTGGATATGTCGGCCGGAG 60.006 63.158 27.83 0.00 0.00 4.63
336 338 1.456892 TGGATATGTCGGCCGGAGT 60.457 57.895 27.83 13.72 0.00 3.85
337 339 1.046472 TGGATATGTCGGCCGGAGTT 61.046 55.000 27.83 10.64 0.00 3.01
338 340 0.106149 GGATATGTCGGCCGGAGTTT 59.894 55.000 27.83 8.01 0.00 2.66
339 341 1.217882 GATATGTCGGCCGGAGTTTG 58.782 55.000 27.83 0.00 0.00 2.93
340 342 0.539986 ATATGTCGGCCGGAGTTTGT 59.460 50.000 27.83 7.29 0.00 2.83
341 343 0.322322 TATGTCGGCCGGAGTTTGTT 59.678 50.000 27.83 4.45 0.00 2.83
342 344 0.322322 ATGTCGGCCGGAGTTTGTTA 59.678 50.000 27.83 0.00 0.00 2.41
343 345 0.322322 TGTCGGCCGGAGTTTGTTAT 59.678 50.000 27.83 0.00 0.00 1.89
344 346 1.004595 GTCGGCCGGAGTTTGTTATC 58.995 55.000 27.83 0.00 0.00 1.75
345 347 0.458889 TCGGCCGGAGTTTGTTATCG 60.459 55.000 27.83 0.00 0.00 2.92
346 348 1.426041 CGGCCGGAGTTTGTTATCGG 61.426 60.000 20.10 0.00 43.13 4.18
348 350 2.390427 CCGGAGTTTGTTATCGGCC 58.610 57.895 0.00 0.00 34.17 6.13
349 351 1.426041 CCGGAGTTTGTTATCGGCCG 61.426 60.000 22.12 22.12 37.20 6.13
350 352 1.426041 CGGAGTTTGTTATCGGCCGG 61.426 60.000 27.83 6.80 34.08 6.13
351 353 0.392060 GGAGTTTGTTATCGGCCGGT 60.392 55.000 27.83 23.47 0.00 5.28
352 354 0.725117 GAGTTTGTTATCGGCCGGTG 59.275 55.000 27.83 0.00 0.00 4.94
353 355 1.135939 GTTTGTTATCGGCCGGTGC 59.864 57.895 27.83 16.55 0.00 5.01
354 356 2.392181 TTTGTTATCGGCCGGTGCG 61.392 57.895 27.83 0.00 38.85 5.34
355 357 2.783241 TTTGTTATCGGCCGGTGCGA 62.783 55.000 27.83 13.04 38.85 5.10
356 358 2.279918 GTTATCGGCCGGTGCGAT 60.280 61.111 27.83 13.76 38.85 4.58
357 359 2.279851 TTATCGGCCGGTGCGATG 60.280 61.111 27.83 0.00 38.85 3.84
358 360 2.787567 TTATCGGCCGGTGCGATGA 61.788 57.895 27.83 4.51 38.85 2.92
359 361 2.693250 TTATCGGCCGGTGCGATGAG 62.693 60.000 27.83 0.00 38.85 2.90
370 372 2.174334 GCGATGAGCTCAAAAGGCA 58.826 52.632 22.50 0.00 44.04 4.75
371 373 0.523072 GCGATGAGCTCAAAAGGCAA 59.477 50.000 22.50 0.00 44.04 4.52
372 374 1.133790 GCGATGAGCTCAAAAGGCAAT 59.866 47.619 22.50 0.18 44.04 3.56
373 375 2.416431 GCGATGAGCTCAAAAGGCAATT 60.416 45.455 22.50 0.00 44.04 2.32
374 376 3.432782 CGATGAGCTCAAAAGGCAATTC 58.567 45.455 22.50 9.27 0.00 2.17
375 377 3.119743 CGATGAGCTCAAAAGGCAATTCA 60.120 43.478 22.50 0.00 0.00 2.57
376 378 4.616604 CGATGAGCTCAAAAGGCAATTCAA 60.617 41.667 22.50 0.00 0.00 2.69
377 379 4.877378 TGAGCTCAAAAGGCAATTCAAT 57.123 36.364 15.67 0.00 0.00 2.57
378 380 4.562082 TGAGCTCAAAAGGCAATTCAATG 58.438 39.130 15.67 0.00 0.00 2.82
379 381 3.930848 GAGCTCAAAAGGCAATTCAATGG 59.069 43.478 9.40 0.00 0.00 3.16
380 382 2.417586 GCTCAAAAGGCAATTCAATGGC 59.582 45.455 0.00 0.00 45.57 4.40
381 383 3.004862 CTCAAAAGGCAATTCAATGGCC 58.995 45.455 7.87 7.87 46.33 5.36
385 387 3.464207 GGCAATTCAATGGCCCAAG 57.536 52.632 4.08 0.00 41.90 3.61
386 388 0.614812 GGCAATTCAATGGCCCAAGT 59.385 50.000 4.08 0.00 41.90 3.16
387 389 1.676615 GGCAATTCAATGGCCCAAGTG 60.677 52.381 4.08 0.00 41.90 3.16
388 390 1.275856 GCAATTCAATGGCCCAAGTGA 59.724 47.619 0.00 0.00 0.00 3.41
389 391 2.093341 GCAATTCAATGGCCCAAGTGAT 60.093 45.455 0.00 0.00 0.00 3.06
390 392 3.527533 CAATTCAATGGCCCAAGTGATG 58.472 45.455 0.00 0.00 0.00 3.07
399 401 3.915575 CAAGTGATGGAGCCAGCC 58.084 61.111 1.88 0.00 0.00 4.85
400 402 1.302285 CAAGTGATGGAGCCAGCCT 59.698 57.895 1.88 0.00 0.00 4.58
401 403 0.323178 CAAGTGATGGAGCCAGCCTT 60.323 55.000 1.88 2.94 0.00 4.35
402 404 0.034670 AAGTGATGGAGCCAGCCTTC 60.035 55.000 1.88 0.00 33.84 3.46
403 405 1.817099 GTGATGGAGCCAGCCTTCG 60.817 63.158 1.88 0.00 35.47 3.79
404 406 2.899339 GATGGAGCCAGCCTTCGC 60.899 66.667 0.00 0.00 0.00 4.70
405 407 4.496336 ATGGAGCCAGCCTTCGCC 62.496 66.667 0.00 0.00 34.57 5.54
407 409 4.416738 GGAGCCAGCCTTCGCCTT 62.417 66.667 0.00 0.00 34.57 4.35
408 410 2.821810 GAGCCAGCCTTCGCCTTC 60.822 66.667 0.00 0.00 34.57 3.46
409 411 4.416738 AGCCAGCCTTCGCCTTCC 62.417 66.667 0.00 0.00 34.57 3.46
410 412 4.722700 GCCAGCCTTCGCCTTCCA 62.723 66.667 0.00 0.00 34.57 3.53
411 413 2.273449 CCAGCCTTCGCCTTCCAT 59.727 61.111 0.00 0.00 34.57 3.41
412 414 1.526887 CCAGCCTTCGCCTTCCATA 59.473 57.895 0.00 0.00 34.57 2.74
413 415 0.107214 CCAGCCTTCGCCTTCCATAA 60.107 55.000 0.00 0.00 34.57 1.90
414 416 1.303309 CAGCCTTCGCCTTCCATAAG 58.697 55.000 0.00 0.00 34.57 1.73
415 417 1.134401 CAGCCTTCGCCTTCCATAAGA 60.134 52.381 0.00 0.00 34.37 2.10
416 418 1.559682 AGCCTTCGCCTTCCATAAGAA 59.440 47.619 0.00 0.00 34.37 2.52
423 425 4.532490 TTCCATAAGAAGGCGCCG 57.468 55.556 23.20 4.23 0.00 6.46
424 426 1.153249 TTCCATAAGAAGGCGCCGG 60.153 57.895 23.20 14.73 0.00 6.13
425 427 3.279875 CCATAAGAAGGCGCCGGC 61.280 66.667 23.20 19.07 38.90 6.13
436 438 4.383602 CGCCGGCCAAAACGACTG 62.384 66.667 23.46 0.00 0.00 3.51
437 439 3.284449 GCCGGCCAAAACGACTGT 61.284 61.111 18.11 0.00 0.00 3.55
438 440 2.943653 CCGGCCAAAACGACTGTC 59.056 61.111 2.24 0.00 0.00 3.51
439 441 1.890041 CCGGCCAAAACGACTGTCA 60.890 57.895 2.24 0.00 0.00 3.58
440 442 1.569493 CGGCCAAAACGACTGTCAG 59.431 57.895 2.24 0.00 0.00 3.51
441 443 1.157870 CGGCCAAAACGACTGTCAGT 61.158 55.000 4.81 4.81 0.00 3.41
442 444 1.021968 GGCCAAAACGACTGTCAGTT 58.978 50.000 7.00 9.88 0.00 3.16
443 445 2.215196 GGCCAAAACGACTGTCAGTTA 58.785 47.619 7.00 0.00 0.00 2.24
444 446 2.032290 GGCCAAAACGACTGTCAGTTAC 60.032 50.000 7.00 0.00 0.00 2.50
445 447 2.870411 GCCAAAACGACTGTCAGTTACT 59.130 45.455 7.00 6.43 0.00 2.24
446 448 3.059800 GCCAAAACGACTGTCAGTTACTC 60.060 47.826 7.00 0.00 0.00 2.59
447 449 4.369182 CCAAAACGACTGTCAGTTACTCT 58.631 43.478 7.00 1.89 0.00 3.24
448 450 4.209288 CCAAAACGACTGTCAGTTACTCTG 59.791 45.833 7.00 3.07 44.85 3.35
449 451 4.650754 AAACGACTGTCAGTTACTCTGT 57.349 40.909 7.00 0.00 43.97 3.41
450 452 5.762825 AAACGACTGTCAGTTACTCTGTA 57.237 39.130 7.00 0.00 43.97 2.74
451 453 4.745837 ACGACTGTCAGTTACTCTGTAC 57.254 45.455 7.00 0.00 43.97 2.90
452 454 3.501445 ACGACTGTCAGTTACTCTGTACC 59.499 47.826 7.00 0.00 43.97 3.34
453 455 3.752222 CGACTGTCAGTTACTCTGTACCT 59.248 47.826 7.00 0.00 43.97 3.08
454 456 4.142859 CGACTGTCAGTTACTCTGTACCTC 60.143 50.000 7.00 0.00 43.97 3.85
455 457 4.988029 ACTGTCAGTTACTCTGTACCTCT 58.012 43.478 0.00 0.00 43.97 3.69
456 458 4.762765 ACTGTCAGTTACTCTGTACCTCTG 59.237 45.833 0.00 0.00 43.97 3.35
457 459 4.726583 TGTCAGTTACTCTGTACCTCTGT 58.273 43.478 0.00 0.00 43.97 3.41
458 460 5.138276 TGTCAGTTACTCTGTACCTCTGTT 58.862 41.667 0.00 0.00 43.97 3.16
459 461 5.597182 TGTCAGTTACTCTGTACCTCTGTTT 59.403 40.000 0.00 0.00 43.97 2.83
460 462 6.097839 TGTCAGTTACTCTGTACCTCTGTTTT 59.902 38.462 0.00 0.00 43.97 2.43
461 463 6.985059 GTCAGTTACTCTGTACCTCTGTTTTT 59.015 38.462 0.00 0.00 43.97 1.94
483 485 2.411904 CTGAGGACAGAACACTTGAGC 58.588 52.381 0.00 0.00 46.03 4.26
484 486 1.762370 TGAGGACAGAACACTTGAGCA 59.238 47.619 0.00 0.00 0.00 4.26
485 487 2.369860 TGAGGACAGAACACTTGAGCAT 59.630 45.455 0.00 0.00 0.00 3.79
486 488 3.181451 TGAGGACAGAACACTTGAGCATT 60.181 43.478 0.00 0.00 0.00 3.56
487 489 3.817647 GAGGACAGAACACTTGAGCATTT 59.182 43.478 0.00 0.00 0.00 2.32
488 490 4.210331 AGGACAGAACACTTGAGCATTTT 58.790 39.130 0.00 0.00 0.00 1.82
489 491 4.646492 AGGACAGAACACTTGAGCATTTTT 59.354 37.500 0.00 0.00 0.00 1.94
490 492 4.978580 GGACAGAACACTTGAGCATTTTTC 59.021 41.667 0.00 0.00 0.00 2.29
491 493 5.450412 GGACAGAACACTTGAGCATTTTTCA 60.450 40.000 0.00 0.00 0.00 2.69
492 494 6.152932 ACAGAACACTTGAGCATTTTTCAT 57.847 33.333 0.00 0.00 0.00 2.57
493 495 5.981315 ACAGAACACTTGAGCATTTTTCATG 59.019 36.000 0.00 0.00 0.00 3.07
494 496 5.404366 CAGAACACTTGAGCATTTTTCATGG 59.596 40.000 0.00 0.00 0.00 3.66
495 497 5.302568 AGAACACTTGAGCATTTTTCATGGA 59.697 36.000 0.00 0.00 0.00 3.41
496 498 5.534207 ACACTTGAGCATTTTTCATGGAA 57.466 34.783 0.00 0.00 0.00 3.53
497 499 5.291971 ACACTTGAGCATTTTTCATGGAAC 58.708 37.500 0.00 0.00 0.00 3.62
513 515 3.879998 TGGAACAGTGTGCTTTCTTACA 58.120 40.909 0.06 0.00 0.00 2.41
514 516 4.265893 TGGAACAGTGTGCTTTCTTACAA 58.734 39.130 0.06 0.00 0.00 2.41
515 517 4.702612 TGGAACAGTGTGCTTTCTTACAAA 59.297 37.500 0.06 0.00 0.00 2.83
516 518 5.359576 TGGAACAGTGTGCTTTCTTACAAAT 59.640 36.000 0.06 0.00 0.00 2.32
517 519 5.915196 GGAACAGTGTGCTTTCTTACAAATC 59.085 40.000 0.06 0.00 0.00 2.17
518 520 6.449635 AACAGTGTGCTTTCTTACAAATCA 57.550 33.333 0.00 0.00 0.00 2.57
519 521 6.639632 ACAGTGTGCTTTCTTACAAATCAT 57.360 33.333 0.00 0.00 0.00 2.45
520 522 6.672147 ACAGTGTGCTTTCTTACAAATCATC 58.328 36.000 0.00 0.00 0.00 2.92
521 523 6.262944 ACAGTGTGCTTTCTTACAAATCATCA 59.737 34.615 0.00 0.00 0.00 3.07
522 524 7.040201 ACAGTGTGCTTTCTTACAAATCATCAT 60.040 33.333 0.00 0.00 0.00 2.45
523 525 7.484007 CAGTGTGCTTTCTTACAAATCATCATC 59.516 37.037 0.00 0.00 0.00 2.92
524 526 7.392673 AGTGTGCTTTCTTACAAATCATCATCT 59.607 33.333 0.00 0.00 0.00 2.90
525 527 8.668353 GTGTGCTTTCTTACAAATCATCATCTA 58.332 33.333 0.00 0.00 0.00 1.98
526 528 8.668353 TGTGCTTTCTTACAAATCATCATCTAC 58.332 33.333 0.00 0.00 0.00 2.59
527 529 8.887717 GTGCTTTCTTACAAATCATCATCTACT 58.112 33.333 0.00 0.00 0.00 2.57
528 530 9.453572 TGCTTTCTTACAAATCATCATCTACTT 57.546 29.630 0.00 0.00 0.00 2.24
561 563 9.442047 AGAACAAATCATCCTCTACTAAAACAG 57.558 33.333 0.00 0.00 0.00 3.16
562 564 9.220767 GAACAAATCATCCTCTACTAAAACAGT 57.779 33.333 0.00 0.00 41.62 3.55
564 566 9.654663 ACAAATCATCCTCTACTAAAACAGTAC 57.345 33.333 0.00 0.00 38.80 2.73
565 567 9.877178 CAAATCATCCTCTACTAAAACAGTACT 57.123 33.333 0.00 0.00 38.80 2.73
566 568 9.877178 AAATCATCCTCTACTAAAACAGTACTG 57.123 33.333 21.44 21.44 38.80 2.74
568 570 9.696572 ATCATCCTCTACTAAAACAGTACTGTA 57.303 33.333 28.13 12.55 44.13 2.74
569 571 9.696572 TCATCCTCTACTAAAACAGTACTGTAT 57.303 33.333 28.13 21.20 44.13 2.29
580 582 8.522542 AAAACAGTACTGTATAAACCAAACCA 57.477 30.769 28.13 0.00 44.13 3.67
581 583 8.522542 AAACAGTACTGTATAAACCAAACCAA 57.477 30.769 28.13 0.00 44.13 3.67
582 584 7.739498 ACAGTACTGTATAAACCAAACCAAG 57.261 36.000 26.91 0.00 42.90 3.61
583 585 7.511268 ACAGTACTGTATAAACCAAACCAAGA 58.489 34.615 26.91 0.00 42.90 3.02
584 586 7.994334 ACAGTACTGTATAAACCAAACCAAGAA 59.006 33.333 26.91 0.00 42.90 2.52
585 587 8.842280 CAGTACTGTATAAACCAAACCAAGAAA 58.158 33.333 15.06 0.00 0.00 2.52
586 588 9.411189 AGTACTGTATAAACCAAACCAAGAAAA 57.589 29.630 0.00 0.00 0.00 2.29
589 591 9.758651 ACTGTATAAACCAAACCAAGAAAATTC 57.241 29.630 0.00 0.00 0.00 2.17
590 592 8.804688 TGTATAAACCAAACCAAGAAAATTCG 57.195 30.769 0.00 0.00 0.00 3.34
591 593 6.779115 ATAAACCAAACCAAGAAAATTCGC 57.221 33.333 0.00 0.00 0.00 4.70
592 594 3.810310 ACCAAACCAAGAAAATTCGCA 57.190 38.095 0.00 0.00 0.00 5.10
593 595 4.130286 ACCAAACCAAGAAAATTCGCAA 57.870 36.364 0.00 0.00 0.00 4.85
594 596 4.119136 ACCAAACCAAGAAAATTCGCAAG 58.881 39.130 0.00 0.00 0.00 4.01
612 614 5.799960 CGCAAGAACATGGAAACTAGTATG 58.200 41.667 0.00 0.00 43.02 2.39
613 615 5.351465 CGCAAGAACATGGAAACTAGTATGT 59.649 40.000 0.00 0.00 43.02 2.29
614 616 6.128282 CGCAAGAACATGGAAACTAGTATGTT 60.128 38.462 17.63 17.63 44.00 2.71
615 617 7.573096 CGCAAGAACATGGAAACTAGTATGTTT 60.573 37.037 18.32 9.25 42.09 2.83
616 618 8.082242 GCAAGAACATGGAAACTAGTATGTTTT 58.918 33.333 18.32 12.49 42.09 2.43
617 619 9.965824 CAAGAACATGGAAACTAGTATGTTTTT 57.034 29.630 18.32 16.38 42.09 1.94
650 652 9.273016 CTTTTTGAGGAATGAAACTACTAGTCA 57.727 33.333 0.00 0.00 0.00 3.41
651 653 9.621629 TTTTTGAGGAATGAAACTACTAGTCAA 57.378 29.630 0.00 0.00 0.00 3.18
652 654 8.603242 TTTGAGGAATGAAACTACTAGTCAAC 57.397 34.615 0.00 0.00 0.00 3.18
653 655 6.698380 TGAGGAATGAAACTACTAGTCAACC 58.302 40.000 0.00 0.00 0.00 3.77
654 656 6.497259 TGAGGAATGAAACTACTAGTCAACCT 59.503 38.462 0.00 4.68 0.00 3.50
655 657 6.937392 AGGAATGAAACTACTAGTCAACCTC 58.063 40.000 0.00 0.00 0.00 3.85
656 658 6.497259 AGGAATGAAACTACTAGTCAACCTCA 59.503 38.462 0.00 0.00 0.00 3.86
657 659 7.181125 AGGAATGAAACTACTAGTCAACCTCAT 59.819 37.037 0.00 0.21 0.00 2.90
658 660 7.278868 GGAATGAAACTACTAGTCAACCTCATG 59.721 40.741 0.00 0.00 0.00 3.07
659 661 6.037786 TGAAACTACTAGTCAACCTCATGG 57.962 41.667 0.00 0.00 39.83 3.66
660 662 4.473477 AACTACTAGTCAACCTCATGGC 57.527 45.455 0.00 0.00 36.63 4.40
661 663 2.427453 ACTACTAGTCAACCTCATGGCG 59.573 50.000 0.00 0.00 36.63 5.69
662 664 0.108138 ACTAGTCAACCTCATGGCGC 60.108 55.000 0.00 0.00 36.63 6.53
663 665 0.811616 CTAGTCAACCTCATGGCGCC 60.812 60.000 22.73 22.73 36.63 6.53
664 666 1.264749 TAGTCAACCTCATGGCGCCT 61.265 55.000 29.70 10.60 36.63 5.52
665 667 2.046023 TCAACCTCATGGCGCCTG 60.046 61.111 29.70 22.27 36.63 4.85
666 668 3.818787 CAACCTCATGGCGCCTGC 61.819 66.667 29.70 0.50 41.71 4.85
667 669 4.039092 AACCTCATGGCGCCTGCT 62.039 61.111 29.70 9.66 42.25 4.24
668 670 3.574074 AACCTCATGGCGCCTGCTT 62.574 57.895 29.70 6.99 42.25 3.91
669 671 2.190313 CCTCATGGCGCCTGCTTA 59.810 61.111 29.70 7.00 42.25 3.09
670 672 2.182842 CCTCATGGCGCCTGCTTAC 61.183 63.158 29.70 0.00 42.25 2.34
671 673 2.124736 TCATGGCGCCTGCTTACC 60.125 61.111 29.70 0.00 42.25 2.85
672 674 2.124570 CATGGCGCCTGCTTACCT 60.125 61.111 29.70 0.00 42.25 3.08
673 675 2.124570 ATGGCGCCTGCTTACCTG 60.125 61.111 29.70 0.00 42.25 4.00
678 680 2.825836 GCCTGCTTACCTGCGCAT 60.826 61.111 12.24 0.00 35.32 4.73
679 681 2.409870 GCCTGCTTACCTGCGCATT 61.410 57.895 12.24 3.19 35.32 3.56
680 682 1.937546 GCCTGCTTACCTGCGCATTT 61.938 55.000 12.24 2.74 35.32 2.32
681 683 0.099436 CCTGCTTACCTGCGCATTTC 59.901 55.000 12.24 0.00 35.32 2.17
682 684 1.089920 CTGCTTACCTGCGCATTTCT 58.910 50.000 12.24 0.00 35.32 2.52
683 685 0.804364 TGCTTACCTGCGCATTTCTG 59.196 50.000 12.24 0.00 35.36 3.02
684 686 0.099436 GCTTACCTGCGCATTTCTGG 59.901 55.000 12.24 11.38 0.00 3.86
685 687 1.453155 CTTACCTGCGCATTTCTGGT 58.547 50.000 20.41 20.41 38.89 4.00
686 688 1.812571 CTTACCTGCGCATTTCTGGTT 59.187 47.619 21.56 7.95 37.10 3.67
687 689 2.772077 TACCTGCGCATTTCTGGTTA 57.228 45.000 21.56 7.09 37.10 2.85
688 690 1.904287 ACCTGCGCATTTCTGGTTAA 58.096 45.000 12.24 0.00 32.79 2.01
689 691 1.812571 ACCTGCGCATTTCTGGTTAAG 59.187 47.619 12.24 0.00 32.79 1.85
690 692 2.083774 CCTGCGCATTTCTGGTTAAGA 58.916 47.619 12.24 0.00 0.00 2.10
691 693 2.487762 CCTGCGCATTTCTGGTTAAGAA 59.512 45.455 12.24 0.00 43.37 2.52
704 706 7.759489 TCTGGTTAAGAAACATACATTTGCT 57.241 32.000 0.00 0.00 37.34 3.91
705 707 7.592938 TCTGGTTAAGAAACATACATTTGCTG 58.407 34.615 0.00 0.00 37.34 4.41
706 708 7.446931 TCTGGTTAAGAAACATACATTTGCTGA 59.553 33.333 0.00 0.00 37.34 4.26
707 709 7.946207 TGGTTAAGAAACATACATTTGCTGAA 58.054 30.769 0.00 0.00 37.34 3.02
708 710 8.584157 TGGTTAAGAAACATACATTTGCTGAAT 58.416 29.630 0.00 0.00 37.34 2.57
712 714 8.986477 AAGAAACATACATTTGCTGAATAACC 57.014 30.769 0.00 0.00 0.00 2.85
713 715 7.547227 AGAAACATACATTTGCTGAATAACCC 58.453 34.615 0.00 0.00 0.00 4.11
714 716 5.499139 ACATACATTTGCTGAATAACCCG 57.501 39.130 0.00 0.00 0.00 5.28
715 717 4.338118 ACATACATTTGCTGAATAACCCGG 59.662 41.667 0.00 0.00 0.00 5.73
716 718 3.080300 ACATTTGCTGAATAACCCGGA 57.920 42.857 0.73 0.00 0.00 5.14
717 719 3.631250 ACATTTGCTGAATAACCCGGAT 58.369 40.909 0.73 0.00 0.00 4.18
718 720 3.381272 ACATTTGCTGAATAACCCGGATG 59.619 43.478 0.73 0.00 0.00 3.51
719 721 3.358111 TTTGCTGAATAACCCGGATGA 57.642 42.857 0.73 0.00 0.00 2.92
720 722 2.620251 TGCTGAATAACCCGGATGAG 57.380 50.000 0.73 0.00 0.00 2.90
721 723 1.140852 TGCTGAATAACCCGGATGAGG 59.859 52.381 0.73 0.00 0.00 3.86
722 724 1.141053 GCTGAATAACCCGGATGAGGT 59.859 52.381 0.73 0.00 40.14 3.85
723 725 2.838736 CTGAATAACCCGGATGAGGTG 58.161 52.381 0.73 0.00 37.78 4.00
724 726 1.134220 TGAATAACCCGGATGAGGTGC 60.134 52.381 0.73 0.00 37.78 5.01
725 727 0.179056 AATAACCCGGATGAGGTGCG 60.179 55.000 0.73 0.00 41.82 5.34
726 728 1.335132 ATAACCCGGATGAGGTGCGT 61.335 55.000 0.73 0.00 40.39 5.24
727 729 1.952102 TAACCCGGATGAGGTGCGTC 61.952 60.000 0.73 0.00 40.39 5.19
728 730 3.461773 CCCGGATGAGGTGCGTCT 61.462 66.667 0.73 0.00 40.39 4.18
729 731 2.105128 CCGGATGAGGTGCGTCTC 59.895 66.667 0.00 0.00 40.39 3.36
730 732 2.418910 CCGGATGAGGTGCGTCTCT 61.419 63.158 0.00 0.00 40.39 3.10
731 733 1.064946 CGGATGAGGTGCGTCTCTC 59.935 63.158 7.48 0.00 36.85 3.20
732 734 1.064946 GGATGAGGTGCGTCTCTCG 59.935 63.158 7.48 0.00 43.12 4.04
733 735 1.377366 GGATGAGGTGCGTCTCTCGA 61.377 60.000 7.48 0.00 42.86 4.04
734 736 0.665835 GATGAGGTGCGTCTCTCGAT 59.334 55.000 7.48 0.00 42.86 3.59
735 737 0.383590 ATGAGGTGCGTCTCTCGATG 59.616 55.000 7.48 0.00 42.86 3.84
745 747 4.945292 CGTCTCTCGATGCAGATAAAAG 57.055 45.455 0.00 0.00 42.86 2.27
746 748 4.355437 CGTCTCTCGATGCAGATAAAAGT 58.645 43.478 0.00 0.00 42.86 2.66
747 749 4.205996 CGTCTCTCGATGCAGATAAAAGTG 59.794 45.833 0.00 0.00 42.86 3.16
748 750 4.505922 GTCTCTCGATGCAGATAAAAGTGG 59.494 45.833 0.00 0.00 0.00 4.00
749 751 4.402474 TCTCTCGATGCAGATAAAAGTGGA 59.598 41.667 0.00 0.00 0.00 4.02
750 752 4.433615 TCTCGATGCAGATAAAAGTGGAC 58.566 43.478 0.00 0.00 0.00 4.02
751 753 3.186909 TCGATGCAGATAAAAGTGGACG 58.813 45.455 0.00 0.00 0.00 4.79
752 754 2.930040 CGATGCAGATAAAAGTGGACGT 59.070 45.455 0.00 0.00 0.00 4.34
753 755 3.242091 CGATGCAGATAAAAGTGGACGTG 60.242 47.826 0.00 0.00 0.00 4.49
754 756 3.120321 TGCAGATAAAAGTGGACGTGT 57.880 42.857 0.00 0.00 0.00 4.49
755 757 2.805671 TGCAGATAAAAGTGGACGTGTG 59.194 45.455 0.00 0.00 0.00 3.82
756 758 2.159627 GCAGATAAAAGTGGACGTGTGG 59.840 50.000 0.00 0.00 0.00 4.17
757 759 3.399330 CAGATAAAAGTGGACGTGTGGT 58.601 45.455 0.00 0.00 0.00 4.16
758 760 3.813166 CAGATAAAAGTGGACGTGTGGTT 59.187 43.478 0.00 0.00 0.00 3.67
759 761 4.062991 AGATAAAAGTGGACGTGTGGTTC 58.937 43.478 0.00 0.00 0.00 3.62
760 762 2.116827 AAAAGTGGACGTGTGGTTCA 57.883 45.000 0.00 0.00 0.00 3.18
761 763 1.663695 AAAGTGGACGTGTGGTTCAG 58.336 50.000 0.00 0.00 33.81 3.02
762 764 0.828022 AAGTGGACGTGTGGTTCAGA 59.172 50.000 0.00 0.00 33.81 3.27
763 765 0.828022 AGTGGACGTGTGGTTCAGAA 59.172 50.000 0.00 0.00 33.81 3.02
764 766 1.208535 AGTGGACGTGTGGTTCAGAAA 59.791 47.619 0.00 0.00 33.81 2.52
765 767 1.597663 GTGGACGTGTGGTTCAGAAAG 59.402 52.381 0.00 0.00 33.81 2.62
766 768 1.208535 TGGACGTGTGGTTCAGAAAGT 59.791 47.619 0.00 0.00 28.30 2.66
767 769 2.285977 GGACGTGTGGTTCAGAAAGTT 58.714 47.619 0.00 0.00 0.00 2.66
768 770 2.681344 GGACGTGTGGTTCAGAAAGTTT 59.319 45.455 0.00 0.00 0.00 2.66
769 771 3.242641 GGACGTGTGGTTCAGAAAGTTTC 60.243 47.826 7.57 7.57 0.00 2.78
770 772 3.606687 ACGTGTGGTTCAGAAAGTTTCT 58.393 40.909 12.50 12.50 41.70 2.52
771 773 4.761975 ACGTGTGGTTCAGAAAGTTTCTA 58.238 39.130 17.62 0.76 38.11 2.10
772 774 4.809426 ACGTGTGGTTCAGAAAGTTTCTAG 59.191 41.667 17.62 12.06 38.11 2.43
773 775 4.318831 CGTGTGGTTCAGAAAGTTTCTAGC 60.319 45.833 17.62 13.10 38.11 3.42
774 776 3.807622 TGTGGTTCAGAAAGTTTCTAGCG 59.192 43.478 17.62 6.47 38.11 4.26
775 777 4.056050 GTGGTTCAGAAAGTTTCTAGCGA 58.944 43.478 17.62 8.70 38.11 4.93
776 778 4.150804 GTGGTTCAGAAAGTTTCTAGCGAG 59.849 45.833 17.62 5.76 38.11 5.03
777 779 4.202223 TGGTTCAGAAAGTTTCTAGCGAGT 60.202 41.667 17.62 0.00 38.11 4.18
778 780 4.750598 GGTTCAGAAAGTTTCTAGCGAGTT 59.249 41.667 17.62 0.00 38.11 3.01
779 781 5.236695 GGTTCAGAAAGTTTCTAGCGAGTTT 59.763 40.000 17.62 0.00 38.11 2.66
780 782 6.356417 GTTCAGAAAGTTTCTAGCGAGTTTC 58.644 40.000 17.62 13.39 38.11 2.78
781 783 5.597806 TCAGAAAGTTTCTAGCGAGTTTCA 58.402 37.500 17.62 5.50 38.11 2.69
782 784 6.046593 TCAGAAAGTTTCTAGCGAGTTTCAA 58.953 36.000 17.62 9.98 38.11 2.69
783 785 6.537301 TCAGAAAGTTTCTAGCGAGTTTCAAA 59.463 34.615 17.62 9.75 38.11 2.69
784 786 6.629252 CAGAAAGTTTCTAGCGAGTTTCAAAC 59.371 38.462 17.62 0.00 38.11 2.93
785 787 6.539103 AGAAAGTTTCTAGCGAGTTTCAAACT 59.461 34.615 16.60 1.21 40.78 2.66
786 788 6.679327 AAGTTTCTAGCGAGTTTCAAACTT 57.321 33.333 14.32 14.32 43.03 2.66
787 789 6.679327 AGTTTCTAGCGAGTTTCAAACTTT 57.321 33.333 3.76 0.00 43.03 2.66
788 790 7.085052 AGTTTCTAGCGAGTTTCAAACTTTT 57.915 32.000 3.76 0.00 43.03 2.27
789 791 7.187480 AGTTTCTAGCGAGTTTCAAACTTTTC 58.813 34.615 3.76 0.00 43.03 2.29
790 792 6.920569 TTCTAGCGAGTTTCAAACTTTTCT 57.079 33.333 3.76 4.90 43.03 2.52
791 793 6.526566 TCTAGCGAGTTTCAAACTTTTCTC 57.473 37.500 3.76 0.00 43.03 2.87
792 794 6.046593 TCTAGCGAGTTTCAAACTTTTCTCA 58.953 36.000 3.76 0.00 43.03 3.27
793 795 5.162000 AGCGAGTTTCAAACTTTTCTCAG 57.838 39.130 3.76 0.00 43.03 3.35
794 796 4.636206 AGCGAGTTTCAAACTTTTCTCAGT 59.364 37.500 3.76 0.00 43.03 3.41
795 797 4.964555 GCGAGTTTCAAACTTTTCTCAGTC 59.035 41.667 3.76 0.00 43.03 3.51
796 798 5.502606 CGAGTTTCAAACTTTTCTCAGTCC 58.497 41.667 3.76 0.00 43.03 3.85
797 799 5.485662 AGTTTCAAACTTTTCTCAGTCCG 57.514 39.130 0.00 0.00 39.04 4.79
798 800 5.183228 AGTTTCAAACTTTTCTCAGTCCGA 58.817 37.500 0.00 0.00 39.04 4.55
799 801 5.646360 AGTTTCAAACTTTTCTCAGTCCGAA 59.354 36.000 0.00 0.00 39.04 4.30
800 802 5.734855 TTCAAACTTTTCTCAGTCCGAAG 57.265 39.130 0.00 0.00 0.00 3.79
801 803 5.018539 TCAAACTTTTCTCAGTCCGAAGA 57.981 39.130 0.00 0.00 0.00 2.87
802 804 5.050490 TCAAACTTTTCTCAGTCCGAAGAG 58.950 41.667 0.00 0.00 0.00 2.85
803 805 4.939052 AACTTTTCTCAGTCCGAAGAGA 57.061 40.909 0.00 0.00 39.01 3.10
804 806 5.476091 AACTTTTCTCAGTCCGAAGAGAT 57.524 39.130 3.39 0.00 40.32 2.75
805 807 5.066968 ACTTTTCTCAGTCCGAAGAGATC 57.933 43.478 3.39 0.00 40.32 2.75
806 808 4.524714 ACTTTTCTCAGTCCGAAGAGATCA 59.475 41.667 0.00 0.00 40.32 2.92
807 809 5.011125 ACTTTTCTCAGTCCGAAGAGATCAA 59.989 40.000 0.00 0.88 40.32 2.57
808 810 4.442375 TTCTCAGTCCGAAGAGATCAAC 57.558 45.455 0.00 0.00 40.32 3.18
809 811 3.421844 TCTCAGTCCGAAGAGATCAACA 58.578 45.455 0.00 0.00 36.05 3.33
810 812 4.019858 TCTCAGTCCGAAGAGATCAACAT 58.980 43.478 0.00 0.00 36.05 2.71
811 813 5.193679 TCTCAGTCCGAAGAGATCAACATA 58.806 41.667 0.00 0.00 36.05 2.29
812 814 5.830457 TCTCAGTCCGAAGAGATCAACATAT 59.170 40.000 0.00 0.00 36.05 1.78
813 815 6.998673 TCTCAGTCCGAAGAGATCAACATATA 59.001 38.462 0.00 0.00 36.05 0.86
814 816 7.667635 TCTCAGTCCGAAGAGATCAACATATAT 59.332 37.037 0.00 0.00 36.05 0.86
815 817 7.821652 TCAGTCCGAAGAGATCAACATATATC 58.178 38.462 0.00 0.00 0.00 1.63
816 818 7.032580 CAGTCCGAAGAGATCAACATATATCC 58.967 42.308 0.00 0.00 0.00 2.59
817 819 6.721668 AGTCCGAAGAGATCAACATATATCCA 59.278 38.462 0.00 0.00 0.00 3.41
818 820 7.233553 AGTCCGAAGAGATCAACATATATCCAA 59.766 37.037 0.00 0.00 0.00 3.53
819 821 7.872993 GTCCGAAGAGATCAACATATATCCAAA 59.127 37.037 0.00 0.00 0.00 3.28
820 822 8.597167 TCCGAAGAGATCAACATATATCCAAAT 58.403 33.333 0.00 0.00 0.00 2.32
821 823 9.875691 CCGAAGAGATCAACATATATCCAAATA 57.124 33.333 0.00 0.00 0.00 1.40
839 841 8.087982 TCCAAATATTCATTAGTTCGATGAGC 57.912 34.615 0.00 0.00 35.17 4.26
840 842 7.714813 TCCAAATATTCATTAGTTCGATGAGCA 59.285 33.333 0.00 0.00 35.17 4.26
841 843 8.509690 CCAAATATTCATTAGTTCGATGAGCAT 58.490 33.333 0.00 0.00 35.17 3.79
842 844 9.888878 CAAATATTCATTAGTTCGATGAGCATT 57.111 29.630 0.00 0.00 35.17 3.56
844 846 8.837788 ATATTCATTAGTTCGATGAGCATTCA 57.162 30.769 0.00 0.00 35.17 2.57
845 847 6.983474 TTCATTAGTTCGATGAGCATTCAA 57.017 33.333 0.00 0.00 36.78 2.69
846 848 7.558161 TTCATTAGTTCGATGAGCATTCAAT 57.442 32.000 0.00 0.00 36.78 2.57
847 849 7.558161 TCATTAGTTCGATGAGCATTCAATT 57.442 32.000 0.00 0.00 36.78 2.32
848 850 7.633621 TCATTAGTTCGATGAGCATTCAATTC 58.366 34.615 0.00 0.00 36.78 2.17
849 851 4.526970 AGTTCGATGAGCATTCAATTCG 57.473 40.909 0.00 0.00 37.24 3.34
850 852 3.935203 AGTTCGATGAGCATTCAATTCGT 59.065 39.130 0.00 0.00 37.21 3.85
851 853 3.931285 TCGATGAGCATTCAATTCGTG 57.069 42.857 0.00 0.00 37.21 4.35
852 854 2.609002 TCGATGAGCATTCAATTCGTGG 59.391 45.455 0.00 0.00 37.21 4.94
853 855 2.286595 CGATGAGCATTCAATTCGTGGG 60.287 50.000 0.00 0.00 36.78 4.61
854 856 1.462616 TGAGCATTCAATTCGTGGGG 58.537 50.000 0.00 0.00 0.00 4.96
855 857 0.740737 GAGCATTCAATTCGTGGGGG 59.259 55.000 0.00 0.00 0.00 5.40
856 858 0.039618 AGCATTCAATTCGTGGGGGT 59.960 50.000 0.00 0.00 0.00 4.95
857 859 1.283613 AGCATTCAATTCGTGGGGGTA 59.716 47.619 0.00 0.00 0.00 3.69
858 860 1.676006 GCATTCAATTCGTGGGGGTAG 59.324 52.381 0.00 0.00 0.00 3.18
859 861 2.297701 CATTCAATTCGTGGGGGTAGG 58.702 52.381 0.00 0.00 0.00 3.18
860 862 1.659022 TTCAATTCGTGGGGGTAGGA 58.341 50.000 0.00 0.00 0.00 2.94
861 863 1.200519 TCAATTCGTGGGGGTAGGAG 58.799 55.000 0.00 0.00 0.00 3.69
862 864 0.463833 CAATTCGTGGGGGTAGGAGC 60.464 60.000 0.00 0.00 0.00 4.70
863 865 0.912487 AATTCGTGGGGGTAGGAGCA 60.912 55.000 0.00 0.00 0.00 4.26
864 866 0.694444 ATTCGTGGGGGTAGGAGCAT 60.694 55.000 0.00 0.00 0.00 3.79
865 867 1.622607 TTCGTGGGGGTAGGAGCATG 61.623 60.000 0.00 0.00 0.00 4.06
866 868 2.367202 CGTGGGGGTAGGAGCATGT 61.367 63.158 0.00 0.00 0.00 3.21
867 869 1.224592 GTGGGGGTAGGAGCATGTG 59.775 63.158 0.00 0.00 0.00 3.21
868 870 2.000701 TGGGGGTAGGAGCATGTGG 61.001 63.158 0.00 0.00 0.00 4.17
869 871 2.193248 GGGGTAGGAGCATGTGGC 59.807 66.667 0.00 0.00 45.30 5.01
885 887 7.633361 GCATGTGGCAAGAAAATATAGATTG 57.367 36.000 0.00 0.00 43.97 2.67
886 888 7.205297 GCATGTGGCAAGAAAATATAGATTGT 58.795 34.615 0.00 0.00 43.97 2.71
887 889 7.707893 GCATGTGGCAAGAAAATATAGATTGTT 59.292 33.333 0.00 0.00 43.97 2.83
888 890 9.241317 CATGTGGCAAGAAAATATAGATTGTTC 57.759 33.333 0.00 0.00 0.00 3.18
889 891 8.347004 TGTGGCAAGAAAATATAGATTGTTCA 57.653 30.769 0.00 0.00 0.00 3.18
890 892 8.243426 TGTGGCAAGAAAATATAGATTGTTCAC 58.757 33.333 0.00 0.00 32.82 3.18
891 893 7.702348 GTGGCAAGAAAATATAGATTGTTCACC 59.298 37.037 0.00 6.42 0.00 4.02
892 894 7.395772 TGGCAAGAAAATATAGATTGTTCACCA 59.604 33.333 0.00 8.00 0.00 4.17
893 895 8.250332 GGCAAGAAAATATAGATTGTTCACCAA 58.750 33.333 0.00 0.00 37.49 3.67
894 896 9.294030 GCAAGAAAATATAGATTGTTCACCAAG 57.706 33.333 7.35 0.00 36.25 3.61
902 904 7.881775 ATAGATTGTTCACCAAGTTTATCCC 57.118 36.000 0.00 0.00 36.25 3.85
903 905 5.640147 AGATTGTTCACCAAGTTTATCCCA 58.360 37.500 0.00 0.00 36.25 4.37
904 906 6.256053 AGATTGTTCACCAAGTTTATCCCAT 58.744 36.000 0.00 0.00 36.25 4.00
905 907 6.725834 AGATTGTTCACCAAGTTTATCCCATT 59.274 34.615 0.00 0.00 36.25 3.16
906 908 6.739331 TTGTTCACCAAGTTTATCCCATTT 57.261 33.333 0.00 0.00 0.00 2.32
907 909 7.841282 TTGTTCACCAAGTTTATCCCATTTA 57.159 32.000 0.00 0.00 0.00 1.40
908 910 7.841282 TGTTCACCAAGTTTATCCCATTTAA 57.159 32.000 0.00 0.00 0.00 1.52
909 911 8.429237 TGTTCACCAAGTTTATCCCATTTAAT 57.571 30.769 0.00 0.00 0.00 1.40
910 912 8.875168 TGTTCACCAAGTTTATCCCATTTAATT 58.125 29.630 0.00 0.00 0.00 1.40
911 913 9.719355 GTTCACCAAGTTTATCCCATTTAATTT 57.281 29.630 0.00 0.00 0.00 1.82
913 915 9.717942 TCACCAAGTTTATCCCATTTAATTTTG 57.282 29.630 0.00 0.00 0.00 2.44
914 916 9.500785 CACCAAGTTTATCCCATTTAATTTTGT 57.499 29.630 0.00 0.00 0.00 2.83
922 924 9.883142 TTATCCCATTTAATTTTGTTCACATCC 57.117 29.630 0.00 0.00 0.00 3.51
923 925 6.706295 TCCCATTTAATTTTGTTCACATCCC 58.294 36.000 0.00 0.00 0.00 3.85
924 926 5.879777 CCCATTTAATTTTGTTCACATCCCC 59.120 40.000 0.00 0.00 0.00 4.81
925 927 6.471146 CCATTTAATTTTGTTCACATCCCCA 58.529 36.000 0.00 0.00 0.00 4.96
926 928 6.939163 CCATTTAATTTTGTTCACATCCCCAA 59.061 34.615 0.00 0.00 0.00 4.12
927 929 7.119553 CCATTTAATTTTGTTCACATCCCCAAG 59.880 37.037 0.00 0.00 0.00 3.61
928 930 4.622260 AATTTTGTTCACATCCCCAAGG 57.378 40.909 0.00 0.00 0.00 3.61
950 952 3.531262 ATTTCGAAGGGAAACGTTTCG 57.469 42.857 29.23 20.85 46.81 3.46
1294 1507 1.520666 GTGATCCCCGACGACCATT 59.479 57.895 0.00 0.00 0.00 3.16
1392 1690 2.190841 CCAAAACGCTGGAACCGGT 61.191 57.895 0.00 0.00 38.96 5.28
1967 2340 2.742774 AGCTTCAAACGTGGAAAATGC 58.257 42.857 0.00 0.00 0.00 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 5.694006 ACTGTAAGCATTATCTTCAGATCGC 59.306 40.000 0.00 0.00 37.60 4.58
186 187 4.667573 TCTTCCAAAGCTCACTAGAGAGA 58.332 43.478 19.94 3.11 44.98 3.10
285 287 3.127533 ATTCAAGCCGAGCACGCC 61.128 61.111 0.00 0.00 38.29 5.68
286 288 2.099062 CATTCAAGCCGAGCACGC 59.901 61.111 0.00 0.00 38.29 5.34
287 289 2.099062 GCATTCAAGCCGAGCACG 59.901 61.111 0.00 0.00 39.43 5.34
288 290 1.427020 GAGCATTCAAGCCGAGCAC 59.573 57.895 0.00 0.00 34.23 4.40
289 291 1.746615 GGAGCATTCAAGCCGAGCA 60.747 57.895 0.00 0.00 34.23 4.26
290 292 1.028868 AAGGAGCATTCAAGCCGAGC 61.029 55.000 0.00 0.00 34.23 5.03
291 293 1.131883 CAAAGGAGCATTCAAGCCGAG 59.868 52.381 0.00 0.00 34.23 4.63
292 294 1.167851 CAAAGGAGCATTCAAGCCGA 58.832 50.000 0.00 0.00 34.23 5.54
293 295 0.171903 CCAAAGGAGCATTCAAGCCG 59.828 55.000 0.00 0.00 34.23 5.52
294 296 0.533951 CCCAAAGGAGCATTCAAGCC 59.466 55.000 0.00 0.00 33.47 4.35
295 297 0.108472 GCCCAAAGGAGCATTCAAGC 60.108 55.000 0.00 0.00 33.47 4.01
296 298 0.533951 GGCCCAAAGGAGCATTCAAG 59.466 55.000 0.00 0.00 33.47 3.02
297 299 0.178938 TGGCCCAAAGGAGCATTCAA 60.179 50.000 0.00 0.00 33.47 2.69
298 300 0.612732 CTGGCCCAAAGGAGCATTCA 60.613 55.000 0.00 0.00 33.47 2.57
299 301 0.613012 ACTGGCCCAAAGGAGCATTC 60.613 55.000 0.00 0.00 33.47 2.67
300 302 0.901580 CACTGGCCCAAAGGAGCATT 60.902 55.000 0.00 0.00 33.47 3.56
301 303 1.304713 CACTGGCCCAAAGGAGCAT 60.305 57.895 0.00 0.00 33.47 3.79
302 304 2.115910 CACTGGCCCAAAGGAGCA 59.884 61.111 0.00 0.00 33.47 4.26
303 305 2.505364 ATCCACTGGCCCAAAGGAGC 62.505 60.000 0.00 0.00 33.47 4.70
304 306 0.918983 TATCCACTGGCCCAAAGGAG 59.081 55.000 0.00 0.00 33.47 3.69
305 307 1.215173 CATATCCACTGGCCCAAAGGA 59.785 52.381 0.00 6.30 33.47 3.36
306 308 1.063717 ACATATCCACTGGCCCAAAGG 60.064 52.381 0.00 0.00 0.00 3.11
307 309 2.301346 GACATATCCACTGGCCCAAAG 58.699 52.381 0.00 0.00 0.00 2.77
308 310 1.408127 CGACATATCCACTGGCCCAAA 60.408 52.381 0.00 0.00 0.00 3.28
309 311 0.180171 CGACATATCCACTGGCCCAA 59.820 55.000 0.00 0.00 0.00 4.12
310 312 1.695114 CCGACATATCCACTGGCCCA 61.695 60.000 0.00 0.00 0.00 5.36
311 313 1.071471 CCGACATATCCACTGGCCC 59.929 63.158 0.00 0.00 0.00 5.80
312 314 1.598130 GCCGACATATCCACTGGCC 60.598 63.158 0.00 0.00 36.51 5.36
313 315 1.598130 GGCCGACATATCCACTGGC 60.598 63.158 0.00 0.00 41.72 4.85
314 316 1.300931 CGGCCGACATATCCACTGG 60.301 63.158 24.07 0.00 0.00 4.00
315 317 1.300931 CCGGCCGACATATCCACTG 60.301 63.158 30.73 0.00 0.00 3.66
316 318 1.456892 TCCGGCCGACATATCCACT 60.457 57.895 30.73 0.00 0.00 4.00
317 319 1.006102 CTCCGGCCGACATATCCAC 60.006 63.158 30.73 0.00 0.00 4.02
318 320 1.046472 AACTCCGGCCGACATATCCA 61.046 55.000 30.73 0.00 0.00 3.41
319 321 0.106149 AAACTCCGGCCGACATATCC 59.894 55.000 30.73 0.00 0.00 2.59
320 322 1.217882 CAAACTCCGGCCGACATATC 58.782 55.000 30.73 0.00 0.00 1.63
321 323 0.539986 ACAAACTCCGGCCGACATAT 59.460 50.000 30.73 6.83 0.00 1.78
322 324 0.322322 AACAAACTCCGGCCGACATA 59.678 50.000 30.73 8.08 0.00 2.29
323 325 0.322322 TAACAAACTCCGGCCGACAT 59.678 50.000 30.73 8.14 0.00 3.06
324 326 0.322322 ATAACAAACTCCGGCCGACA 59.678 50.000 30.73 12.18 0.00 4.35
325 327 1.004595 GATAACAAACTCCGGCCGAC 58.995 55.000 30.73 0.00 0.00 4.79
326 328 0.458889 CGATAACAAACTCCGGCCGA 60.459 55.000 30.73 12.25 0.00 5.54
327 329 1.426041 CCGATAACAAACTCCGGCCG 61.426 60.000 21.04 21.04 33.47 6.13
328 330 2.390427 CCGATAACAAACTCCGGCC 58.610 57.895 0.00 0.00 33.47 6.13
330 332 1.426041 CGGCCGATAACAAACTCCGG 61.426 60.000 24.07 0.00 42.74 5.14
331 333 1.426041 CCGGCCGATAACAAACTCCG 61.426 60.000 30.73 0.00 35.60 4.63
332 334 0.392060 ACCGGCCGATAACAAACTCC 60.392 55.000 30.73 0.00 0.00 3.85
333 335 0.725117 CACCGGCCGATAACAAACTC 59.275 55.000 30.73 0.00 0.00 3.01
334 336 1.303091 GCACCGGCCGATAACAAACT 61.303 55.000 30.73 0.00 0.00 2.66
335 337 1.135939 GCACCGGCCGATAACAAAC 59.864 57.895 30.73 2.69 0.00 2.93
336 338 2.392181 CGCACCGGCCGATAACAAA 61.392 57.895 30.73 0.00 36.38 2.83
337 339 2.581208 ATCGCACCGGCCGATAACAA 62.581 55.000 30.73 7.71 36.38 2.83
338 340 3.083848 ATCGCACCGGCCGATAACA 62.084 57.895 30.73 7.73 36.38 2.41
339 341 2.279918 ATCGCACCGGCCGATAAC 60.280 61.111 30.73 12.19 36.38 1.89
340 342 2.279851 CATCGCACCGGCCGATAA 60.280 61.111 30.73 7.48 36.38 1.75
341 343 3.207547 CTCATCGCACCGGCCGATA 62.208 63.158 30.73 7.05 36.38 2.92
342 344 4.592192 CTCATCGCACCGGCCGAT 62.592 66.667 30.73 20.91 36.38 4.18
346 348 4.819761 TGAGCTCATCGCACCGGC 62.820 66.667 13.74 0.00 42.61 6.13
347 349 1.298157 TTTTGAGCTCATCGCACCGG 61.298 55.000 19.04 0.00 42.61 5.28
348 350 0.095935 CTTTTGAGCTCATCGCACCG 59.904 55.000 19.04 0.00 42.61 4.94
349 351 0.449388 CCTTTTGAGCTCATCGCACC 59.551 55.000 19.04 0.00 42.61 5.01
350 352 0.179179 GCCTTTTGAGCTCATCGCAC 60.179 55.000 19.04 3.99 42.61 5.34
351 353 0.606130 TGCCTTTTGAGCTCATCGCA 60.606 50.000 19.04 18.51 42.61 5.10
352 354 0.523072 TTGCCTTTTGAGCTCATCGC 59.477 50.000 19.04 16.20 39.57 4.58
353 355 3.119743 TGAATTGCCTTTTGAGCTCATCG 60.120 43.478 19.04 8.75 0.00 3.84
354 356 4.445452 TGAATTGCCTTTTGAGCTCATC 57.555 40.909 19.04 9.20 0.00 2.92
355 357 4.877378 TTGAATTGCCTTTTGAGCTCAT 57.123 36.364 19.04 0.00 0.00 2.90
356 358 4.561938 CCATTGAATTGCCTTTTGAGCTCA 60.562 41.667 13.74 13.74 0.00 4.26
357 359 3.930848 CCATTGAATTGCCTTTTGAGCTC 59.069 43.478 6.82 6.82 0.00 4.09
358 360 3.867216 GCCATTGAATTGCCTTTTGAGCT 60.867 43.478 0.00 0.00 0.00 4.09
359 361 2.417586 GCCATTGAATTGCCTTTTGAGC 59.582 45.455 0.00 0.00 0.00 4.26
360 362 3.004862 GGCCATTGAATTGCCTTTTGAG 58.995 45.455 12.58 0.00 42.01 3.02
361 363 2.290197 GGGCCATTGAATTGCCTTTTGA 60.290 45.455 18.29 0.00 44.71 2.69
362 364 2.086094 GGGCCATTGAATTGCCTTTTG 58.914 47.619 18.29 0.00 44.71 2.44
363 365 1.704070 TGGGCCATTGAATTGCCTTTT 59.296 42.857 18.29 0.00 44.71 2.27
364 366 1.360185 TGGGCCATTGAATTGCCTTT 58.640 45.000 18.29 0.00 44.71 3.11
365 367 1.279846 CTTGGGCCATTGAATTGCCTT 59.720 47.619 18.29 0.00 44.71 4.35
366 368 0.906775 CTTGGGCCATTGAATTGCCT 59.093 50.000 18.29 0.00 44.71 4.75
367 369 0.614812 ACTTGGGCCATTGAATTGCC 59.385 50.000 7.26 11.53 44.59 4.52
368 370 1.275856 TCACTTGGGCCATTGAATTGC 59.724 47.619 7.26 0.00 0.00 3.56
369 371 3.527533 CATCACTTGGGCCATTGAATTG 58.472 45.455 19.14 11.87 0.00 2.32
370 372 2.502538 CCATCACTTGGGCCATTGAATT 59.497 45.455 19.14 4.61 42.33 2.17
371 373 2.112998 CCATCACTTGGGCCATTGAAT 58.887 47.619 19.14 4.62 42.33 2.57
372 374 1.076841 TCCATCACTTGGGCCATTGAA 59.923 47.619 19.14 3.99 46.45 2.69
373 375 0.703488 TCCATCACTTGGGCCATTGA 59.297 50.000 17.93 17.93 46.45 2.57
374 376 1.108776 CTCCATCACTTGGGCCATTG 58.891 55.000 7.26 8.33 46.45 2.82
375 377 0.685458 GCTCCATCACTTGGGCCATT 60.685 55.000 7.26 0.00 46.45 3.16
376 378 1.076485 GCTCCATCACTTGGGCCAT 60.076 57.895 7.26 0.00 46.45 4.40
377 379 2.356278 GCTCCATCACTTGGGCCA 59.644 61.111 0.00 0.00 46.45 5.36
379 381 1.751927 CTGGCTCCATCACTTGGGC 60.752 63.158 0.00 0.00 46.45 5.36
380 382 1.751927 GCTGGCTCCATCACTTGGG 60.752 63.158 0.00 0.00 46.45 4.12
382 384 0.323178 AAGGCTGGCTCCATCACTTG 60.323 55.000 3.48 0.00 0.00 3.16
383 385 0.034670 GAAGGCTGGCTCCATCACTT 60.035 55.000 3.48 0.00 0.00 3.16
384 386 1.606531 GAAGGCTGGCTCCATCACT 59.393 57.895 3.48 0.00 0.00 3.41
385 387 1.817099 CGAAGGCTGGCTCCATCAC 60.817 63.158 3.48 0.00 0.00 3.06
386 388 2.586245 CGAAGGCTGGCTCCATCA 59.414 61.111 3.48 0.00 0.00 3.07
387 389 2.899339 GCGAAGGCTGGCTCCATC 60.899 66.667 3.48 0.00 35.83 3.51
406 408 1.153249 CCGGCGCCTTCTTATGGAA 60.153 57.895 26.68 0.00 0.00 3.53
407 409 2.504032 CCGGCGCCTTCTTATGGA 59.496 61.111 26.68 0.00 0.00 3.41
408 410 3.279875 GCCGGCGCCTTCTTATGG 61.280 66.667 26.68 17.44 0.00 2.74
419 421 4.383602 CAGTCGTTTTGGCCGGCG 62.384 66.667 22.54 5.20 34.56 6.46
420 422 3.249973 GACAGTCGTTTTGGCCGGC 62.250 63.158 21.18 21.18 0.00 6.13
421 423 1.841663 CTGACAGTCGTTTTGGCCGG 61.842 60.000 0.00 0.00 0.00 6.13
422 424 1.157870 ACTGACAGTCGTTTTGGCCG 61.158 55.000 1.07 0.00 0.00 6.13
423 425 1.021968 AACTGACAGTCGTTTTGGCC 58.978 50.000 8.93 0.00 0.00 5.36
424 426 2.870411 AGTAACTGACAGTCGTTTTGGC 59.130 45.455 8.93 5.53 0.00 4.52
425 427 4.369182 AGAGTAACTGACAGTCGTTTTGG 58.631 43.478 8.93 0.00 0.00 3.28
463 465 2.224137 TGCTCAAGTGTTCTGTCCTCAG 60.224 50.000 0.00 0.00 42.54 3.35
464 466 1.762370 TGCTCAAGTGTTCTGTCCTCA 59.238 47.619 0.00 0.00 0.00 3.86
465 467 2.533266 TGCTCAAGTGTTCTGTCCTC 57.467 50.000 0.00 0.00 0.00 3.71
466 468 3.498774 AATGCTCAAGTGTTCTGTCCT 57.501 42.857 0.00 0.00 0.00 3.85
467 469 4.574599 AAAATGCTCAAGTGTTCTGTCC 57.425 40.909 0.00 0.00 0.00 4.02
468 470 5.581605 TGAAAAATGCTCAAGTGTTCTGTC 58.418 37.500 0.00 0.00 0.00 3.51
469 471 5.581126 TGAAAAATGCTCAAGTGTTCTGT 57.419 34.783 0.00 0.00 0.00 3.41
470 472 5.404366 CCATGAAAAATGCTCAAGTGTTCTG 59.596 40.000 0.00 0.00 0.00 3.02
471 473 5.302568 TCCATGAAAAATGCTCAAGTGTTCT 59.697 36.000 0.00 0.00 0.00 3.01
472 474 5.531634 TCCATGAAAAATGCTCAAGTGTTC 58.468 37.500 0.00 0.00 0.00 3.18
473 475 5.534207 TCCATGAAAAATGCTCAAGTGTT 57.466 34.783 0.00 0.00 0.00 3.32
474 476 5.163426 TGTTCCATGAAAAATGCTCAAGTGT 60.163 36.000 0.00 0.00 0.00 3.55
475 477 5.291178 TGTTCCATGAAAAATGCTCAAGTG 58.709 37.500 0.00 0.00 0.00 3.16
476 478 5.069516 ACTGTTCCATGAAAAATGCTCAAGT 59.930 36.000 0.00 0.00 0.00 3.16
477 479 5.404366 CACTGTTCCATGAAAAATGCTCAAG 59.596 40.000 0.00 0.00 0.00 3.02
478 480 5.163426 ACACTGTTCCATGAAAAATGCTCAA 60.163 36.000 0.00 0.00 0.00 3.02
479 481 4.341806 ACACTGTTCCATGAAAAATGCTCA 59.658 37.500 0.00 0.00 0.00 4.26
480 482 4.682860 CACACTGTTCCATGAAAAATGCTC 59.317 41.667 0.00 0.00 0.00 4.26
481 483 4.624015 CACACTGTTCCATGAAAAATGCT 58.376 39.130 0.00 0.00 0.00 3.79
482 484 3.184986 GCACACTGTTCCATGAAAAATGC 59.815 43.478 0.00 0.00 0.00 3.56
483 485 4.624015 AGCACACTGTTCCATGAAAAATG 58.376 39.130 0.00 0.00 0.00 2.32
484 486 4.942761 AGCACACTGTTCCATGAAAAAT 57.057 36.364 0.00 0.00 0.00 1.82
485 487 4.734398 AAGCACACTGTTCCATGAAAAA 57.266 36.364 0.00 0.00 0.00 1.94
486 488 4.402155 AGAAAGCACACTGTTCCATGAAAA 59.598 37.500 0.00 0.00 0.00 2.29
487 489 3.953612 AGAAAGCACACTGTTCCATGAAA 59.046 39.130 0.00 0.00 0.00 2.69
488 490 3.554934 AGAAAGCACACTGTTCCATGAA 58.445 40.909 0.00 0.00 0.00 2.57
489 491 3.213206 AGAAAGCACACTGTTCCATGA 57.787 42.857 0.00 0.00 0.00 3.07
490 492 3.996150 AAGAAAGCACACTGTTCCATG 57.004 42.857 0.00 0.00 0.00 3.66
491 493 4.460263 TGTAAGAAAGCACACTGTTCCAT 58.540 39.130 0.00 0.00 0.00 3.41
492 494 3.879998 TGTAAGAAAGCACACTGTTCCA 58.120 40.909 0.00 0.00 0.00 3.53
493 495 4.893424 TTGTAAGAAAGCACACTGTTCC 57.107 40.909 0.00 0.00 0.00 3.62
494 496 6.494842 TGATTTGTAAGAAAGCACACTGTTC 58.505 36.000 0.00 0.00 0.00 3.18
495 497 6.449635 TGATTTGTAAGAAAGCACACTGTT 57.550 33.333 0.00 0.00 0.00 3.16
496 498 6.262944 TGATGATTTGTAAGAAAGCACACTGT 59.737 34.615 0.00 0.00 0.00 3.55
497 499 6.671190 TGATGATTTGTAAGAAAGCACACTG 58.329 36.000 0.00 0.00 0.00 3.66
498 500 6.882610 TGATGATTTGTAAGAAAGCACACT 57.117 33.333 0.00 0.00 0.00 3.55
499 501 7.533426 AGATGATGATTTGTAAGAAAGCACAC 58.467 34.615 0.00 0.00 0.00 3.82
500 502 7.692460 AGATGATGATTTGTAAGAAAGCACA 57.308 32.000 0.00 0.00 0.00 4.57
501 503 8.887717 AGTAGATGATGATTTGTAAGAAAGCAC 58.112 33.333 0.00 0.00 0.00 4.40
502 504 9.453572 AAGTAGATGATGATTTGTAAGAAAGCA 57.546 29.630 0.00 0.00 0.00 3.91
535 537 9.442047 CTGTTTTAGTAGAGGATGATTTGTTCT 57.558 33.333 0.00 0.00 0.00 3.01
536 538 9.220767 ACTGTTTTAGTAGAGGATGATTTGTTC 57.779 33.333 0.00 0.00 38.04 3.18
538 540 9.654663 GTACTGTTTTAGTAGAGGATGATTTGT 57.345 33.333 0.00 0.00 42.37 2.83
539 541 9.877178 AGTACTGTTTTAGTAGAGGATGATTTG 57.123 33.333 0.00 0.00 42.37 2.32
540 542 9.877178 CAGTACTGTTTTAGTAGAGGATGATTT 57.123 33.333 15.06 0.00 42.37 2.17
541 543 9.036980 ACAGTACTGTTTTAGTAGAGGATGATT 57.963 33.333 22.95 0.00 42.37 2.57
542 544 8.596781 ACAGTACTGTTTTAGTAGAGGATGAT 57.403 34.615 22.95 0.00 42.37 2.45
543 545 9.696572 ATACAGTACTGTTTTAGTAGAGGATGA 57.303 33.333 32.15 9.91 42.37 2.92
554 556 9.624373 TGGTTTGGTTTATACAGTACTGTTTTA 57.376 29.630 32.15 20.74 41.83 1.52
555 557 8.522542 TGGTTTGGTTTATACAGTACTGTTTT 57.477 30.769 32.15 21.70 41.83 2.43
556 558 8.522542 TTGGTTTGGTTTATACAGTACTGTTT 57.477 30.769 32.15 25.85 41.83 2.83
557 559 7.994334 TCTTGGTTTGGTTTATACAGTACTGTT 59.006 33.333 32.15 21.10 41.83 3.16
558 560 7.511268 TCTTGGTTTGGTTTATACAGTACTGT 58.489 34.615 30.13 30.13 46.87 3.55
559 561 7.972832 TCTTGGTTTGGTTTATACAGTACTG 57.027 36.000 21.44 21.44 0.00 2.74
560 562 8.983702 TTTCTTGGTTTGGTTTATACAGTACT 57.016 30.769 0.00 0.00 0.00 2.73
563 565 9.758651 GAATTTTCTTGGTTTGGTTTATACAGT 57.241 29.630 0.00 0.00 0.00 3.55
564 566 8.911662 CGAATTTTCTTGGTTTGGTTTATACAG 58.088 33.333 0.00 0.00 0.00 2.74
565 567 7.382759 GCGAATTTTCTTGGTTTGGTTTATACA 59.617 33.333 0.00 0.00 0.00 2.29
566 568 7.382759 TGCGAATTTTCTTGGTTTGGTTTATAC 59.617 33.333 0.00 0.00 0.00 1.47
567 569 7.434492 TGCGAATTTTCTTGGTTTGGTTTATA 58.566 30.769 0.00 0.00 0.00 0.98
568 570 6.284459 TGCGAATTTTCTTGGTTTGGTTTAT 58.716 32.000 0.00 0.00 0.00 1.40
569 571 5.661458 TGCGAATTTTCTTGGTTTGGTTTA 58.339 33.333 0.00 0.00 0.00 2.01
570 572 4.508662 TGCGAATTTTCTTGGTTTGGTTT 58.491 34.783 0.00 0.00 0.00 3.27
571 573 4.130286 TGCGAATTTTCTTGGTTTGGTT 57.870 36.364 0.00 0.00 0.00 3.67
572 574 3.810310 TGCGAATTTTCTTGGTTTGGT 57.190 38.095 0.00 0.00 0.00 3.67
573 575 4.367450 TCTTGCGAATTTTCTTGGTTTGG 58.633 39.130 0.00 0.00 0.00 3.28
574 576 5.290643 TGTTCTTGCGAATTTTCTTGGTTTG 59.709 36.000 0.00 0.00 0.00 2.93
575 577 5.415221 TGTTCTTGCGAATTTTCTTGGTTT 58.585 33.333 0.00 0.00 0.00 3.27
576 578 5.004922 TGTTCTTGCGAATTTTCTTGGTT 57.995 34.783 0.00 0.00 0.00 3.67
577 579 4.647424 TGTTCTTGCGAATTTTCTTGGT 57.353 36.364 0.00 0.00 0.00 3.67
578 580 4.386652 CCATGTTCTTGCGAATTTTCTTGG 59.613 41.667 0.00 0.00 0.00 3.61
579 581 5.221880 TCCATGTTCTTGCGAATTTTCTTG 58.778 37.500 0.00 0.00 0.00 3.02
580 582 5.452078 TCCATGTTCTTGCGAATTTTCTT 57.548 34.783 0.00 0.00 0.00 2.52
581 583 5.452078 TTCCATGTTCTTGCGAATTTTCT 57.548 34.783 0.00 0.00 0.00 2.52
582 584 5.691754 AGTTTCCATGTTCTTGCGAATTTTC 59.308 36.000 0.00 0.00 0.00 2.29
583 585 5.600696 AGTTTCCATGTTCTTGCGAATTTT 58.399 33.333 0.00 0.00 0.00 1.82
584 586 5.200368 AGTTTCCATGTTCTTGCGAATTT 57.800 34.783 0.00 0.00 0.00 1.82
585 587 4.853924 AGTTTCCATGTTCTTGCGAATT 57.146 36.364 0.00 0.00 0.00 2.17
586 588 5.003804 ACTAGTTTCCATGTTCTTGCGAAT 58.996 37.500 0.00 0.00 0.00 3.34
587 589 4.385825 ACTAGTTTCCATGTTCTTGCGAA 58.614 39.130 0.00 0.00 0.00 4.70
588 590 4.002906 ACTAGTTTCCATGTTCTTGCGA 57.997 40.909 0.00 0.00 0.00 5.10
589 591 5.351465 ACATACTAGTTTCCATGTTCTTGCG 59.649 40.000 0.00 0.00 0.00 4.85
590 592 6.743575 ACATACTAGTTTCCATGTTCTTGC 57.256 37.500 0.00 0.00 0.00 4.01
591 593 9.965824 AAAAACATACTAGTTTCCATGTTCTTG 57.034 29.630 17.81 0.00 39.92 3.02
624 626 9.273016 TGACTAGTAGTTTCATTCCTCAAAAAG 57.727 33.333 3.85 0.00 0.00 2.27
625 627 9.621629 TTGACTAGTAGTTTCATTCCTCAAAAA 57.378 29.630 3.85 0.00 0.00 1.94
626 628 9.052759 GTTGACTAGTAGTTTCATTCCTCAAAA 57.947 33.333 3.85 0.00 0.00 2.44
627 629 7.660208 GGTTGACTAGTAGTTTCATTCCTCAAA 59.340 37.037 3.85 0.00 0.00 2.69
628 630 7.016268 AGGTTGACTAGTAGTTTCATTCCTCAA 59.984 37.037 3.85 0.00 0.00 3.02
629 631 6.497259 AGGTTGACTAGTAGTTTCATTCCTCA 59.503 38.462 3.85 0.00 0.00 3.86
630 632 6.937392 AGGTTGACTAGTAGTTTCATTCCTC 58.063 40.000 3.85 0.00 0.00 3.71
631 633 6.497259 TGAGGTTGACTAGTAGTTTCATTCCT 59.503 38.462 3.85 9.36 31.17 3.36
632 634 6.698380 TGAGGTTGACTAGTAGTTTCATTCC 58.302 40.000 3.85 5.28 0.00 3.01
633 635 7.278868 CCATGAGGTTGACTAGTAGTTTCATTC 59.721 40.741 3.85 1.86 0.00 2.67
634 636 7.106239 CCATGAGGTTGACTAGTAGTTTCATT 58.894 38.462 3.85 0.00 0.00 2.57
635 637 6.644347 CCATGAGGTTGACTAGTAGTTTCAT 58.356 40.000 3.85 6.78 0.00 2.57
636 638 5.568825 GCCATGAGGTTGACTAGTAGTTTCA 60.569 44.000 3.85 4.90 37.19 2.69
637 639 4.870991 GCCATGAGGTTGACTAGTAGTTTC 59.129 45.833 3.85 0.00 37.19 2.78
638 640 4.620803 CGCCATGAGGTTGACTAGTAGTTT 60.621 45.833 3.85 0.00 37.19 2.66
639 641 3.119101 CGCCATGAGGTTGACTAGTAGTT 60.119 47.826 3.85 0.00 37.19 2.24
640 642 2.427453 CGCCATGAGGTTGACTAGTAGT 59.573 50.000 1.37 1.37 37.19 2.73
641 643 2.799917 GCGCCATGAGGTTGACTAGTAG 60.800 54.545 0.00 0.00 37.19 2.57
642 644 1.136305 GCGCCATGAGGTTGACTAGTA 59.864 52.381 0.00 0.00 37.19 1.82
643 645 0.108138 GCGCCATGAGGTTGACTAGT 60.108 55.000 0.00 0.00 37.19 2.57
644 646 0.811616 GGCGCCATGAGGTTGACTAG 60.812 60.000 24.80 0.00 37.19 2.57
645 647 1.220749 GGCGCCATGAGGTTGACTA 59.779 57.895 24.80 0.00 37.19 2.59
646 648 2.045926 GGCGCCATGAGGTTGACT 60.046 61.111 24.80 0.00 37.19 3.41
647 649 2.045926 AGGCGCCATGAGGTTGAC 60.046 61.111 31.54 0.00 37.19 3.18
648 650 2.046023 CAGGCGCCATGAGGTTGA 60.046 61.111 31.54 0.00 37.19 3.18
649 651 3.818787 GCAGGCGCCATGAGGTTG 61.819 66.667 31.54 17.47 37.19 3.77
650 652 2.196997 TAAGCAGGCGCCATGAGGTT 62.197 55.000 31.54 25.86 39.83 3.50
651 653 2.669133 TAAGCAGGCGCCATGAGGT 61.669 57.895 31.54 17.75 39.83 3.85
652 654 2.182842 GTAAGCAGGCGCCATGAGG 61.183 63.158 31.54 13.33 39.83 3.86
653 655 2.182842 GGTAAGCAGGCGCCATGAG 61.183 63.158 31.54 16.39 39.83 2.90
654 656 2.124736 GGTAAGCAGGCGCCATGA 60.125 61.111 31.54 3.87 39.83 3.07
655 657 2.124570 AGGTAAGCAGGCGCCATG 60.125 61.111 31.54 23.68 39.83 3.66
656 658 2.124570 CAGGTAAGCAGGCGCCAT 60.125 61.111 31.54 14.26 39.83 4.40
665 667 0.099436 CCAGAAATGCGCAGGTAAGC 59.901 55.000 18.32 1.60 0.00 3.09
666 668 1.453155 ACCAGAAATGCGCAGGTAAG 58.547 50.000 18.32 5.55 0.00 2.34
667 669 1.904287 AACCAGAAATGCGCAGGTAA 58.096 45.000 18.32 0.00 31.10 2.85
668 670 2.772077 TAACCAGAAATGCGCAGGTA 57.228 45.000 18.32 0.00 31.10 3.08
669 671 1.812571 CTTAACCAGAAATGCGCAGGT 59.187 47.619 18.32 14.85 0.00 4.00
670 672 2.083774 TCTTAACCAGAAATGCGCAGG 58.916 47.619 18.32 14.09 0.00 4.85
671 673 3.829886 TTCTTAACCAGAAATGCGCAG 57.170 42.857 18.32 2.85 38.68 5.18
679 681 8.081633 CAGCAAATGTATGTTTCTTAACCAGAA 58.918 33.333 0.00 0.00 39.99 3.02
680 682 7.446931 TCAGCAAATGTATGTTTCTTAACCAGA 59.553 33.333 0.00 0.00 33.15 3.86
681 683 7.592938 TCAGCAAATGTATGTTTCTTAACCAG 58.407 34.615 0.00 0.00 33.15 4.00
682 684 7.517614 TCAGCAAATGTATGTTTCTTAACCA 57.482 32.000 0.00 0.00 33.15 3.67
683 685 8.986477 ATTCAGCAAATGTATGTTTCTTAACC 57.014 30.769 0.00 0.00 33.15 2.85
687 689 8.034804 GGGTTATTCAGCAAATGTATGTTTCTT 58.965 33.333 0.00 0.00 0.00 2.52
688 690 7.547227 GGGTTATTCAGCAAATGTATGTTTCT 58.453 34.615 0.00 0.00 0.00 2.52
689 691 6.472163 CGGGTTATTCAGCAAATGTATGTTTC 59.528 38.462 0.00 0.00 0.00 2.78
690 692 6.329496 CGGGTTATTCAGCAAATGTATGTTT 58.671 36.000 0.00 0.00 0.00 2.83
691 693 5.163561 CCGGGTTATTCAGCAAATGTATGTT 60.164 40.000 0.00 0.00 0.00 2.71
692 694 4.338118 CCGGGTTATTCAGCAAATGTATGT 59.662 41.667 0.00 0.00 0.00 2.29
693 695 4.578516 TCCGGGTTATTCAGCAAATGTATG 59.421 41.667 0.00 0.00 0.00 2.39
694 696 4.787551 TCCGGGTTATTCAGCAAATGTAT 58.212 39.130 0.00 0.00 0.00 2.29
695 697 4.223556 TCCGGGTTATTCAGCAAATGTA 57.776 40.909 0.00 0.00 0.00 2.29
696 698 3.080300 TCCGGGTTATTCAGCAAATGT 57.920 42.857 0.00 0.00 0.00 2.71
697 699 3.631686 TCATCCGGGTTATTCAGCAAATG 59.368 43.478 0.00 0.00 0.00 2.32
698 700 3.885297 CTCATCCGGGTTATTCAGCAAAT 59.115 43.478 0.00 0.00 0.00 2.32
699 701 3.278574 CTCATCCGGGTTATTCAGCAAA 58.721 45.455 0.00 0.00 0.00 3.68
700 702 2.421388 CCTCATCCGGGTTATTCAGCAA 60.421 50.000 0.00 0.00 0.00 3.91
701 703 1.140852 CCTCATCCGGGTTATTCAGCA 59.859 52.381 0.00 0.00 0.00 4.41
702 704 1.141053 ACCTCATCCGGGTTATTCAGC 59.859 52.381 0.00 0.00 32.46 4.26
703 705 2.838736 CACCTCATCCGGGTTATTCAG 58.161 52.381 0.00 0.00 34.44 3.02
704 706 1.134220 GCACCTCATCCGGGTTATTCA 60.134 52.381 0.00 0.00 34.44 2.57
705 707 1.594331 GCACCTCATCCGGGTTATTC 58.406 55.000 0.00 0.00 34.44 1.75
706 708 0.179056 CGCACCTCATCCGGGTTATT 60.179 55.000 0.00 0.00 34.44 1.40
707 709 1.335132 ACGCACCTCATCCGGGTTAT 61.335 55.000 0.00 0.00 34.44 1.89
708 710 1.952102 GACGCACCTCATCCGGGTTA 61.952 60.000 0.00 0.00 34.44 2.85
709 711 3.310860 GACGCACCTCATCCGGGTT 62.311 63.158 0.00 0.00 34.44 4.11
710 712 3.771160 GACGCACCTCATCCGGGT 61.771 66.667 0.00 0.00 37.59 5.28
711 713 3.432051 GAGACGCACCTCATCCGGG 62.432 68.421 0.00 0.00 33.50 5.73
712 714 2.105128 GAGACGCACCTCATCCGG 59.895 66.667 0.00 0.00 33.50 5.14
713 715 1.064946 GAGAGACGCACCTCATCCG 59.935 63.158 5.32 0.00 35.68 4.18
714 716 1.064946 CGAGAGACGCACCTCATCC 59.935 63.158 5.32 0.00 35.68 3.51
715 717 0.665835 ATCGAGAGACGCACCTCATC 59.334 55.000 5.32 0.49 46.97 2.92
716 718 0.383590 CATCGAGAGACGCACCTCAT 59.616 55.000 5.32 0.00 46.97 2.90
717 719 1.803289 CATCGAGAGACGCACCTCA 59.197 57.895 5.32 0.00 46.97 3.86
718 720 4.700037 CATCGAGAGACGCACCTC 57.300 61.111 0.00 0.00 46.97 3.85
724 726 4.205996 CACTTTTATCTGCATCGAGAGACG 59.794 45.833 0.00 0.00 46.97 4.18
725 727 4.505922 CCACTTTTATCTGCATCGAGAGAC 59.494 45.833 0.00 0.00 46.97 3.36
727 729 4.505922 GTCCACTTTTATCTGCATCGAGAG 59.494 45.833 0.00 0.00 0.00 3.20
728 730 4.433615 GTCCACTTTTATCTGCATCGAGA 58.566 43.478 0.00 0.00 0.00 4.04
729 731 3.243877 CGTCCACTTTTATCTGCATCGAG 59.756 47.826 0.00 0.00 0.00 4.04
730 732 3.186909 CGTCCACTTTTATCTGCATCGA 58.813 45.455 0.00 0.00 0.00 3.59
731 733 2.930040 ACGTCCACTTTTATCTGCATCG 59.070 45.455 0.00 0.00 0.00 3.84
732 734 3.684788 ACACGTCCACTTTTATCTGCATC 59.315 43.478 0.00 0.00 0.00 3.91
733 735 3.436704 CACACGTCCACTTTTATCTGCAT 59.563 43.478 0.00 0.00 0.00 3.96
734 736 2.805671 CACACGTCCACTTTTATCTGCA 59.194 45.455 0.00 0.00 0.00 4.41
735 737 2.159627 CCACACGTCCACTTTTATCTGC 59.840 50.000 0.00 0.00 0.00 4.26
736 738 3.399330 ACCACACGTCCACTTTTATCTG 58.601 45.455 0.00 0.00 0.00 2.90
737 739 3.764237 ACCACACGTCCACTTTTATCT 57.236 42.857 0.00 0.00 0.00 1.98
738 740 3.810941 TGAACCACACGTCCACTTTTATC 59.189 43.478 0.00 0.00 0.00 1.75
739 741 3.811083 TGAACCACACGTCCACTTTTAT 58.189 40.909 0.00 0.00 0.00 1.40
740 742 3.118702 TCTGAACCACACGTCCACTTTTA 60.119 43.478 0.00 0.00 0.00 1.52
741 743 2.014128 CTGAACCACACGTCCACTTTT 58.986 47.619 0.00 0.00 0.00 2.27
742 744 1.208535 TCTGAACCACACGTCCACTTT 59.791 47.619 0.00 0.00 0.00 2.66
743 745 0.828022 TCTGAACCACACGTCCACTT 59.172 50.000 0.00 0.00 0.00 3.16
744 746 0.828022 TTCTGAACCACACGTCCACT 59.172 50.000 0.00 0.00 0.00 4.00
745 747 1.597663 CTTTCTGAACCACACGTCCAC 59.402 52.381 0.00 0.00 0.00 4.02
746 748 1.208535 ACTTTCTGAACCACACGTCCA 59.791 47.619 0.00 0.00 0.00 4.02
747 749 1.949465 ACTTTCTGAACCACACGTCC 58.051 50.000 0.00 0.00 0.00 4.79
748 750 3.621715 AGAAACTTTCTGAACCACACGTC 59.378 43.478 3.07 0.00 38.91 4.34
749 751 3.606687 AGAAACTTTCTGAACCACACGT 58.393 40.909 3.07 0.00 38.91 4.49
750 752 4.318831 GCTAGAAACTTTCTGAACCACACG 60.319 45.833 13.44 0.00 40.94 4.49
751 753 4.318831 CGCTAGAAACTTTCTGAACCACAC 60.319 45.833 13.44 0.00 40.94 3.82
752 754 3.807622 CGCTAGAAACTTTCTGAACCACA 59.192 43.478 13.44 0.00 40.94 4.17
753 755 4.056050 TCGCTAGAAACTTTCTGAACCAC 58.944 43.478 13.44 0.00 40.94 4.16
754 756 4.202223 ACTCGCTAGAAACTTTCTGAACCA 60.202 41.667 13.44 0.00 40.94 3.67
755 757 4.308265 ACTCGCTAGAAACTTTCTGAACC 58.692 43.478 13.44 0.10 40.94 3.62
756 758 5.908916 AACTCGCTAGAAACTTTCTGAAC 57.091 39.130 13.44 3.09 40.94 3.18
757 759 6.046593 TGAAACTCGCTAGAAACTTTCTGAA 58.953 36.000 13.44 0.00 40.94 3.02
758 760 5.597806 TGAAACTCGCTAGAAACTTTCTGA 58.402 37.500 13.44 2.81 40.94 3.27
759 761 5.907197 TGAAACTCGCTAGAAACTTTCTG 57.093 39.130 13.44 5.69 40.94 3.02
760 762 6.539103 AGTTTGAAACTCGCTAGAAACTTTCT 59.461 34.615 4.45 9.04 39.63 2.52
761 763 6.716438 AGTTTGAAACTCGCTAGAAACTTTC 58.284 36.000 4.45 0.00 37.02 2.62
762 764 6.679327 AGTTTGAAACTCGCTAGAAACTTT 57.321 33.333 4.45 0.00 37.02 2.66
763 765 6.679327 AAGTTTGAAACTCGCTAGAAACTT 57.321 33.333 11.44 8.74 41.91 2.66
764 766 6.679327 AAAGTTTGAAACTCGCTAGAAACT 57.321 33.333 11.44 0.00 41.91 2.66
765 767 7.187480 AGAAAAGTTTGAAACTCGCTAGAAAC 58.813 34.615 11.44 0.00 41.91 2.78
766 768 7.065324 TGAGAAAAGTTTGAAACTCGCTAGAAA 59.935 33.333 11.44 0.00 41.91 2.52
767 769 6.537301 TGAGAAAAGTTTGAAACTCGCTAGAA 59.463 34.615 11.44 0.00 41.91 2.10
768 770 6.046593 TGAGAAAAGTTTGAAACTCGCTAGA 58.953 36.000 11.44 0.00 41.91 2.43
769 771 6.018669 ACTGAGAAAAGTTTGAAACTCGCTAG 60.019 38.462 11.44 7.94 41.91 3.42
770 772 5.815740 ACTGAGAAAAGTTTGAAACTCGCTA 59.184 36.000 11.44 0.00 41.91 4.26
771 773 4.636206 ACTGAGAAAAGTTTGAAACTCGCT 59.364 37.500 11.44 8.75 41.91 4.93
772 774 4.909894 ACTGAGAAAAGTTTGAAACTCGC 58.090 39.130 11.44 4.10 41.91 5.03
773 775 5.502606 GGACTGAGAAAAGTTTGAAACTCG 58.497 41.667 11.44 0.00 41.91 4.18
774 776 5.293569 TCGGACTGAGAAAAGTTTGAAACTC 59.706 40.000 11.44 0.00 41.91 3.01
775 777 5.183228 TCGGACTGAGAAAAGTTTGAAACT 58.817 37.500 4.45 4.45 45.46 2.66
776 778 5.479716 TCGGACTGAGAAAAGTTTGAAAC 57.520 39.130 0.00 0.00 0.00 2.78
777 779 5.878116 TCTTCGGACTGAGAAAAGTTTGAAA 59.122 36.000 0.00 0.00 0.00 2.69
778 780 5.424757 TCTTCGGACTGAGAAAAGTTTGAA 58.575 37.500 0.00 0.00 0.00 2.69
779 781 5.018539 TCTTCGGACTGAGAAAAGTTTGA 57.981 39.130 0.00 0.00 0.00 2.69
780 782 5.050490 TCTCTTCGGACTGAGAAAAGTTTG 58.950 41.667 7.25 0.00 36.52 2.93
781 783 5.277857 TCTCTTCGGACTGAGAAAAGTTT 57.722 39.130 7.25 0.00 36.52 2.66
782 784 4.939052 TCTCTTCGGACTGAGAAAAGTT 57.061 40.909 7.25 0.00 36.52 2.66
783 785 4.524714 TGATCTCTTCGGACTGAGAAAAGT 59.475 41.667 12.08 0.00 41.82 2.66
784 786 5.065704 TGATCTCTTCGGACTGAGAAAAG 57.934 43.478 12.08 0.00 41.82 2.27
785 787 5.221441 TGTTGATCTCTTCGGACTGAGAAAA 60.221 40.000 12.08 8.38 41.82 2.29
786 788 4.280929 TGTTGATCTCTTCGGACTGAGAAA 59.719 41.667 12.08 3.38 41.82 2.52
787 789 3.826729 TGTTGATCTCTTCGGACTGAGAA 59.173 43.478 12.08 0.00 41.82 2.87
788 790 3.421844 TGTTGATCTCTTCGGACTGAGA 58.578 45.455 10.90 10.90 42.56 3.27
789 791 3.857549 TGTTGATCTCTTCGGACTGAG 57.142 47.619 0.00 1.95 0.00 3.35
790 792 7.094162 GGATATATGTTGATCTCTTCGGACTGA 60.094 40.741 0.00 0.00 0.00 3.41
791 793 7.032580 GGATATATGTTGATCTCTTCGGACTG 58.967 42.308 0.00 0.00 0.00 3.51
792 794 6.721668 TGGATATATGTTGATCTCTTCGGACT 59.278 38.462 0.00 0.00 0.00 3.85
793 795 6.925211 TGGATATATGTTGATCTCTTCGGAC 58.075 40.000 0.00 0.00 0.00 4.79
794 796 7.539034 TTGGATATATGTTGATCTCTTCGGA 57.461 36.000 0.00 0.00 0.00 4.55
795 797 8.783833 ATTTGGATATATGTTGATCTCTTCGG 57.216 34.615 0.00 0.00 0.00 4.30
813 815 8.725148 GCTCATCGAACTAATGAATATTTGGAT 58.275 33.333 0.00 0.00 32.96 3.41
814 816 7.714813 TGCTCATCGAACTAATGAATATTTGGA 59.285 33.333 0.00 0.00 32.96 3.53
815 817 7.864686 TGCTCATCGAACTAATGAATATTTGG 58.135 34.615 0.00 0.00 32.96 3.28
816 818 9.888878 AATGCTCATCGAACTAATGAATATTTG 57.111 29.630 0.00 0.00 32.96 2.32
818 820 9.276590 TGAATGCTCATCGAACTAATGAATATT 57.723 29.630 0.00 0.00 32.96 1.28
819 821 8.837788 TGAATGCTCATCGAACTAATGAATAT 57.162 30.769 0.00 0.00 32.96 1.28
820 822 8.661352 TTGAATGCTCATCGAACTAATGAATA 57.339 30.769 0.00 0.00 32.96 1.75
821 823 7.558161 TTGAATGCTCATCGAACTAATGAAT 57.442 32.000 0.00 0.00 32.96 2.57
822 824 6.983474 TTGAATGCTCATCGAACTAATGAA 57.017 33.333 0.00 0.00 32.96 2.57
823 825 7.517259 CGAATTGAATGCTCATCGAACTAATGA 60.517 37.037 0.00 0.00 36.57 2.57
824 826 6.572621 CGAATTGAATGCTCATCGAACTAATG 59.427 38.462 0.00 0.00 36.57 1.90
825 827 6.258727 ACGAATTGAATGCTCATCGAACTAAT 59.741 34.615 3.54 0.00 36.57 1.73
826 828 5.580691 ACGAATTGAATGCTCATCGAACTAA 59.419 36.000 3.54 0.00 36.57 2.24
827 829 5.005682 CACGAATTGAATGCTCATCGAACTA 59.994 40.000 3.54 0.00 36.57 2.24
828 830 3.935203 ACGAATTGAATGCTCATCGAACT 59.065 39.130 3.54 0.00 36.57 3.01
829 831 4.024438 CACGAATTGAATGCTCATCGAAC 58.976 43.478 3.54 0.00 36.57 3.95
830 832 3.063861 CCACGAATTGAATGCTCATCGAA 59.936 43.478 3.54 0.00 36.57 3.71
831 833 2.609002 CCACGAATTGAATGCTCATCGA 59.391 45.455 3.54 0.00 36.57 3.59
832 834 2.286595 CCCACGAATTGAATGCTCATCG 60.287 50.000 0.00 0.00 39.12 3.84
833 835 2.033801 CCCCACGAATTGAATGCTCATC 59.966 50.000 0.00 0.00 0.00 2.92
834 836 2.026641 CCCCACGAATTGAATGCTCAT 58.973 47.619 0.00 0.00 0.00 2.90
835 837 1.462616 CCCCACGAATTGAATGCTCA 58.537 50.000 0.00 0.00 0.00 4.26
836 838 0.740737 CCCCCACGAATTGAATGCTC 59.259 55.000 0.00 0.00 0.00 4.26
837 839 0.039618 ACCCCCACGAATTGAATGCT 59.960 50.000 0.00 0.00 0.00 3.79
838 840 1.676006 CTACCCCCACGAATTGAATGC 59.324 52.381 0.00 0.00 0.00 3.56
839 841 2.092646 TCCTACCCCCACGAATTGAATG 60.093 50.000 0.00 0.00 0.00 2.67
840 842 2.172717 CTCCTACCCCCACGAATTGAAT 59.827 50.000 0.00 0.00 0.00 2.57
841 843 1.557832 CTCCTACCCCCACGAATTGAA 59.442 52.381 0.00 0.00 0.00 2.69
842 844 1.200519 CTCCTACCCCCACGAATTGA 58.799 55.000 0.00 0.00 0.00 2.57
843 845 0.463833 GCTCCTACCCCCACGAATTG 60.464 60.000 0.00 0.00 0.00 2.32
844 846 0.912487 TGCTCCTACCCCCACGAATT 60.912 55.000 0.00 0.00 0.00 2.17
845 847 0.694444 ATGCTCCTACCCCCACGAAT 60.694 55.000 0.00 0.00 0.00 3.34
846 848 1.306654 ATGCTCCTACCCCCACGAA 60.307 57.895 0.00 0.00 0.00 3.85
847 849 2.063979 CATGCTCCTACCCCCACGA 61.064 63.158 0.00 0.00 0.00 4.35
848 850 2.367202 ACATGCTCCTACCCCCACG 61.367 63.158 0.00 0.00 0.00 4.94
849 851 1.224592 CACATGCTCCTACCCCCAC 59.775 63.158 0.00 0.00 0.00 4.61
850 852 2.000701 CCACATGCTCCTACCCCCA 61.001 63.158 0.00 0.00 0.00 4.96
851 853 2.919043 CCACATGCTCCTACCCCC 59.081 66.667 0.00 0.00 0.00 5.40
852 854 2.193248 GCCACATGCTCCTACCCC 59.807 66.667 0.00 0.00 36.87 4.95
853 855 0.749454 CTTGCCACATGCTCCTACCC 60.749 60.000 0.00 0.00 42.00 3.69
854 856 0.253044 TCTTGCCACATGCTCCTACC 59.747 55.000 0.00 0.00 42.00 3.18
855 857 2.113860 TTCTTGCCACATGCTCCTAC 57.886 50.000 0.00 0.00 42.00 3.18
856 858 2.877097 TTTCTTGCCACATGCTCCTA 57.123 45.000 0.00 0.00 42.00 2.94
857 859 1.999648 TTTTCTTGCCACATGCTCCT 58.000 45.000 0.00 0.00 42.00 3.69
858 860 4.660789 ATATTTTCTTGCCACATGCTCC 57.339 40.909 0.00 0.00 42.00 4.70
859 861 6.624352 TCTATATTTTCTTGCCACATGCTC 57.376 37.500 0.00 0.00 42.00 4.26
860 862 7.069085 ACAATCTATATTTTCTTGCCACATGCT 59.931 33.333 0.00 0.00 42.00 3.79
861 863 7.205297 ACAATCTATATTTTCTTGCCACATGC 58.795 34.615 0.00 0.00 41.77 4.06
862 864 9.241317 GAACAATCTATATTTTCTTGCCACATG 57.759 33.333 0.00 0.00 0.00 3.21
863 865 8.970020 TGAACAATCTATATTTTCTTGCCACAT 58.030 29.630 0.00 0.00 0.00 3.21
864 866 8.243426 GTGAACAATCTATATTTTCTTGCCACA 58.757 33.333 0.00 0.00 0.00 4.17
865 867 7.702348 GGTGAACAATCTATATTTTCTTGCCAC 59.298 37.037 0.00 0.00 0.00 5.01
866 868 7.395772 TGGTGAACAATCTATATTTTCTTGCCA 59.604 33.333 0.00 0.00 0.00 4.92
867 869 7.771183 TGGTGAACAATCTATATTTTCTTGCC 58.229 34.615 0.00 0.00 0.00 4.52
868 870 9.294030 CTTGGTGAACAATCTATATTTTCTTGC 57.706 33.333 0.00 0.00 38.65 4.01
876 878 9.574516 GGGATAAACTTGGTGAACAATCTATAT 57.425 33.333 0.00 0.00 38.65 0.86
877 879 8.553153 TGGGATAAACTTGGTGAACAATCTATA 58.447 33.333 0.00 0.00 38.65 1.31
878 880 7.410174 TGGGATAAACTTGGTGAACAATCTAT 58.590 34.615 0.00 0.00 38.65 1.98
879 881 6.785076 TGGGATAAACTTGGTGAACAATCTA 58.215 36.000 0.00 0.00 38.65 1.98
880 882 5.640147 TGGGATAAACTTGGTGAACAATCT 58.360 37.500 0.00 0.00 38.65 2.40
881 883 5.975693 TGGGATAAACTTGGTGAACAATC 57.024 39.130 0.00 0.00 38.65 2.67
882 884 6.933514 AATGGGATAAACTTGGTGAACAAT 57.066 33.333 0.00 0.00 38.65 2.71
883 885 6.739331 AAATGGGATAAACTTGGTGAACAA 57.261 33.333 0.00 0.00 37.55 2.83
884 886 7.841282 TTAAATGGGATAAACTTGGTGAACA 57.159 32.000 0.00 0.00 0.00 3.18
885 887 9.719355 AAATTAAATGGGATAAACTTGGTGAAC 57.281 29.630 0.00 0.00 0.00 3.18
887 889 9.717942 CAAAATTAAATGGGATAAACTTGGTGA 57.282 29.630 0.00 0.00 0.00 4.02
888 890 9.500785 ACAAAATTAAATGGGATAAACTTGGTG 57.499 29.630 0.00 0.00 0.00 4.17
896 898 9.883142 GGATGTGAACAAAATTAAATGGGATAA 57.117 29.630 0.00 0.00 0.00 1.75
897 899 8.482128 GGGATGTGAACAAAATTAAATGGGATA 58.518 33.333 0.00 0.00 0.00 2.59
898 900 7.337938 GGGATGTGAACAAAATTAAATGGGAT 58.662 34.615 0.00 0.00 0.00 3.85
899 901 6.296145 GGGGATGTGAACAAAATTAAATGGGA 60.296 38.462 0.00 0.00 0.00 4.37
900 902 5.879777 GGGGATGTGAACAAAATTAAATGGG 59.120 40.000 0.00 0.00 0.00 4.00
901 903 6.471146 TGGGGATGTGAACAAAATTAAATGG 58.529 36.000 0.00 0.00 0.00 3.16
902 904 7.119553 CCTTGGGGATGTGAACAAAATTAAATG 59.880 37.037 0.00 0.00 33.58 2.32
903 905 7.017056 TCCTTGGGGATGTGAACAAAATTAAAT 59.983 33.333 0.00 0.00 36.57 1.40
904 906 6.327626 TCCTTGGGGATGTGAACAAAATTAAA 59.672 34.615 0.00 0.00 36.57 1.52
905 907 5.841237 TCCTTGGGGATGTGAACAAAATTAA 59.159 36.000 0.00 0.00 36.57 1.40
906 908 5.398236 TCCTTGGGGATGTGAACAAAATTA 58.602 37.500 0.00 0.00 36.57 1.40
907 909 4.230455 TCCTTGGGGATGTGAACAAAATT 58.770 39.130 0.00 0.00 36.57 1.82
908 910 3.855668 TCCTTGGGGATGTGAACAAAAT 58.144 40.909 0.00 0.00 36.57 1.82
909 911 3.320610 TCCTTGGGGATGTGAACAAAA 57.679 42.857 0.00 0.00 36.57 2.44
910 912 3.320610 TTCCTTGGGGATGTGAACAAA 57.679 42.857 0.00 0.00 41.87 2.83
911 913 3.541242 ATTCCTTGGGGATGTGAACAA 57.459 42.857 0.00 0.00 41.87 2.83
912 914 3.541242 AATTCCTTGGGGATGTGAACA 57.459 42.857 0.00 0.00 41.87 3.18
913 915 3.119495 CGAAATTCCTTGGGGATGTGAAC 60.119 47.826 0.00 0.00 41.87 3.18
914 916 3.088532 CGAAATTCCTTGGGGATGTGAA 58.911 45.455 0.00 0.00 41.87 3.18
915 917 2.307392 TCGAAATTCCTTGGGGATGTGA 59.693 45.455 0.00 0.00 41.87 3.58
916 918 2.722094 TCGAAATTCCTTGGGGATGTG 58.278 47.619 0.00 0.00 41.87 3.21
917 919 3.356290 CTTCGAAATTCCTTGGGGATGT 58.644 45.455 0.00 0.00 41.87 3.06
918 920 2.689983 CCTTCGAAATTCCTTGGGGATG 59.310 50.000 0.00 0.00 41.87 3.51
919 921 2.358195 CCCTTCGAAATTCCTTGGGGAT 60.358 50.000 8.75 0.00 41.87 3.85
920 922 1.005450 CCCTTCGAAATTCCTTGGGGA 59.995 52.381 8.75 0.00 40.36 4.81
921 923 1.005450 TCCCTTCGAAATTCCTTGGGG 59.995 52.381 14.45 11.45 34.27 4.96
922 924 2.507407 TCCCTTCGAAATTCCTTGGG 57.493 50.000 9.54 9.54 34.76 4.12
923 925 3.365969 CGTTTCCCTTCGAAATTCCTTGG 60.366 47.826 0.00 0.00 42.38 3.61
924 926 3.252458 ACGTTTCCCTTCGAAATTCCTTG 59.748 43.478 0.00 0.00 42.38 3.61
925 927 3.483421 ACGTTTCCCTTCGAAATTCCTT 58.517 40.909 0.00 0.00 42.38 3.36
926 928 3.136009 ACGTTTCCCTTCGAAATTCCT 57.864 42.857 0.00 0.00 42.38 3.36
927 929 3.909776 AACGTTTCCCTTCGAAATTCC 57.090 42.857 0.00 0.00 42.38 3.01
928 930 3.904234 CGAAACGTTTCCCTTCGAAATTC 59.096 43.478 29.95 6.58 43.53 2.17
929 931 3.560896 TCGAAACGTTTCCCTTCGAAATT 59.439 39.130 29.95 0.00 45.64 1.82
930 932 3.132925 TCGAAACGTTTCCCTTCGAAAT 58.867 40.909 29.95 0.00 45.64 2.17
931 933 2.548875 TCGAAACGTTTCCCTTCGAAA 58.451 42.857 29.95 6.11 45.64 3.46
932 934 2.222007 TCGAAACGTTTCCCTTCGAA 57.778 45.000 29.95 10.34 45.64 3.71
933 935 1.774639 CTCGAAACGTTTCCCTTCGA 58.225 50.000 29.95 23.73 46.23 3.71
934 936 0.163146 GCTCGAAACGTTTCCCTTCG 59.837 55.000 29.95 21.15 42.49 3.79
935 937 0.516001 GGCTCGAAACGTTTCCCTTC 59.484 55.000 29.95 18.07 33.68 3.46
1967 2340 5.134202 AGCTTTTTATTTCCCGGTTGAAG 57.866 39.130 0.00 0.00 0.00 3.02
2139 2563 0.320374 CCGTCCTCACCTGTAGCAAA 59.680 55.000 0.00 0.00 0.00 3.68
2184 2627 2.283529 ACCCGTGCTCGATGGTTCT 61.284 57.895 10.21 0.00 39.71 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.