Multiple sequence alignment - TraesCS6B01G347200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G347200 chr6B 100.000 2957 0 0 1 2957 611499056 611502012 0.000000e+00 5461.0
1 TraesCS6B01G347200 chr6B 79.358 872 157 21 1084 1941 611698463 611699325 2.540000e-165 592.0
2 TraesCS6B01G347200 chr6D 88.889 2367 148 54 456 2755 407522214 407524532 0.000000e+00 2808.0
3 TraesCS6B01G347200 chr6D 79.402 869 145 27 1093 1941 407579696 407580550 1.530000e-162 582.0
4 TraesCS6B01G347200 chr6A 90.281 2099 113 35 406 2456 553054290 553056345 0.000000e+00 2662.0
5 TraesCS6B01G347200 chr6A 79.391 854 156 19 1093 1933 553100348 553101194 4.250000e-163 584.0
6 TraesCS6B01G347200 chr6A 84.000 275 27 9 2509 2769 553056360 553056631 6.330000e-62 248.0
7 TraesCS6B01G347200 chr7B 82.564 866 119 20 1123 1956 95046324 95045459 0.000000e+00 734.0
8 TraesCS6B01G347200 chr7B 80.846 851 133 16 1136 1956 94810812 94809962 2.480000e-180 641.0
9 TraesCS6B01G347200 chr7B 86.705 346 41 4 1 344 100327018 100326676 2.150000e-101 379.0
10 TraesCS6B01G347200 chr7B 84.456 386 53 4 1 380 665209641 665209257 1.000000e-99 374.0
11 TraesCS6B01G347200 chr7D 82.527 847 123 17 1133 1956 133827360 133828204 0.000000e+00 721.0
12 TraesCS6B01G347200 chr7D 81.199 851 122 24 1086 1926 133665659 133664837 0.000000e+00 651.0
13 TraesCS6B01G347200 chr7D 83.805 389 48 13 1 380 572808716 572809098 3.620000e-94 355.0
14 TraesCS6B01G347200 chr7A 82.374 851 118 23 1123 1941 132619139 132619989 0.000000e+00 712.0
15 TraesCS6B01G347200 chr5B 85.175 371 52 3 12 380 492375655 492375286 7.740000e-101 377.0
16 TraesCS6B01G347200 chr4B 83.727 381 59 3 1 380 582112061 582112439 1.010000e-94 357.0
17 TraesCS6B01G347200 chr2D 83.204 387 48 13 1 380 47008477 47008853 3.650000e-89 339.0
18 TraesCS6B01G347200 chr2B 83.152 368 59 3 15 380 69337535 69337901 1.700000e-87 333.0
19 TraesCS6B01G347200 chr2B 81.726 394 63 6 1 386 540257866 540257474 1.320000e-83 320.0
20 TraesCS6B01G347200 chr4D 82.383 386 50 14 1 380 312571382 312571755 1.320000e-83 320.0
21 TraesCS6B01G347200 chr4D 85.938 64 4 4 2474 2536 359747411 359747470 2.460000e-06 63.9
22 TraesCS6B01G347200 chrUn 94.737 38 1 1 2506 2542 12324733 12324770 1.140000e-04 58.4
23 TraesCS6B01G347200 chrUn 92.105 38 2 1 2506 2542 12347018 12347055 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G347200 chr6B 611499056 611502012 2956 False 5461 5461 100.0000 1 2957 1 chr6B.!!$F1 2956
1 TraesCS6B01G347200 chr6B 611698463 611699325 862 False 592 592 79.3580 1084 1941 1 chr6B.!!$F2 857
2 TraesCS6B01G347200 chr6D 407522214 407524532 2318 False 2808 2808 88.8890 456 2755 1 chr6D.!!$F1 2299
3 TraesCS6B01G347200 chr6D 407579696 407580550 854 False 582 582 79.4020 1093 1941 1 chr6D.!!$F2 848
4 TraesCS6B01G347200 chr6A 553054290 553056631 2341 False 1455 2662 87.1405 406 2769 2 chr6A.!!$F2 2363
5 TraesCS6B01G347200 chr6A 553100348 553101194 846 False 584 584 79.3910 1093 1933 1 chr6A.!!$F1 840
6 TraesCS6B01G347200 chr7B 95045459 95046324 865 True 734 734 82.5640 1123 1956 1 chr7B.!!$R2 833
7 TraesCS6B01G347200 chr7B 94809962 94810812 850 True 641 641 80.8460 1136 1956 1 chr7B.!!$R1 820
8 TraesCS6B01G347200 chr7D 133827360 133828204 844 False 721 721 82.5270 1133 1956 1 chr7D.!!$F1 823
9 TraesCS6B01G347200 chr7D 133664837 133665659 822 True 651 651 81.1990 1086 1926 1 chr7D.!!$R1 840
10 TraesCS6B01G347200 chr7A 132619139 132619989 850 False 712 712 82.3740 1123 1941 1 chr7A.!!$F1 818

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
335 336 0.025898 GGATTTTTAGACGTCGGCGC 59.974 55.0 10.5 0.0 42.83 6.53 F
380 381 0.247736 GGACGTGACTGGAGATGCTT 59.752 55.0 0.0 0.0 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1295 1329 0.905357 GTAGAGCTGGTGGATGGTGT 59.095 55.0 0.00 0.0 0.00 4.16 R
2141 2242 0.964358 GCCAGTGCTGCAATTCCTCT 60.964 55.0 2.77 0.0 33.53 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.557099 TATATAGCAGCCGAGGGTGG 58.443 55.000 21.05 5.18 43.11 4.61
20 21 1.194781 ATATAGCAGCCGAGGGTGGG 61.195 60.000 21.05 0.00 43.11 4.61
31 32 3.993584 GGGTGGGCGTCGTGTGTA 61.994 66.667 0.00 0.00 0.00 2.90
32 33 2.735857 GGTGGGCGTCGTGTGTAC 60.736 66.667 0.00 0.00 0.00 2.90
33 34 2.027897 GTGGGCGTCGTGTGTACA 59.972 61.111 0.00 0.00 0.00 2.90
34 35 2.027897 TGGGCGTCGTGTGTACAC 59.972 61.111 19.36 19.36 43.15 2.90
42 43 4.036977 GTGTGTACACGTGGTGGG 57.963 61.111 21.57 0.00 37.94 4.61
43 44 1.442567 GTGTGTACACGTGGTGGGA 59.557 57.895 21.57 0.00 37.94 4.37
44 45 0.599204 GTGTGTACACGTGGTGGGAG 60.599 60.000 21.57 0.00 37.94 4.30
45 46 1.005394 GTGTACACGTGGTGGGAGG 60.005 63.158 21.57 0.00 37.94 4.30
46 47 1.458020 TGTACACGTGGTGGGAGGT 60.458 57.895 21.57 0.00 37.94 3.85
47 48 1.005394 GTACACGTGGTGGGAGGTG 60.005 63.158 21.57 0.00 37.94 4.00
48 49 2.211410 TACACGTGGTGGGAGGTGG 61.211 63.158 21.57 0.00 37.94 4.61
49 50 4.329545 CACGTGGTGGGAGGTGGG 62.330 72.222 7.95 0.00 0.00 4.61
50 51 4.892291 ACGTGGTGGGAGGTGGGT 62.892 66.667 0.00 0.00 0.00 4.51
51 52 4.016706 CGTGGTGGGAGGTGGGTC 62.017 72.222 0.00 0.00 0.00 4.46
52 53 2.529389 GTGGTGGGAGGTGGGTCT 60.529 66.667 0.00 0.00 0.00 3.85
53 54 2.154074 GTGGTGGGAGGTGGGTCTT 61.154 63.158 0.00 0.00 0.00 3.01
54 55 1.846124 TGGTGGGAGGTGGGTCTTC 60.846 63.158 0.00 0.00 0.00 2.87
55 56 2.663196 GTGGGAGGTGGGTCTTCG 59.337 66.667 0.00 0.00 0.00 3.79
56 57 3.319198 TGGGAGGTGGGTCTTCGC 61.319 66.667 0.00 0.00 36.06 4.70
57 58 4.097361 GGGAGGTGGGTCTTCGCC 62.097 72.222 0.00 0.00 37.57 5.54
58 59 4.452733 GGAGGTGGGTCTTCGCCG 62.453 72.222 0.00 0.00 41.86 6.46
81 82 3.204827 GCGCCGCATGTGAGGAAT 61.205 61.111 3.15 0.00 37.14 3.01
82 83 3.017323 CGCCGCATGTGAGGAATC 58.983 61.111 8.11 0.00 37.14 2.52
83 84 1.815003 CGCCGCATGTGAGGAATCA 60.815 57.895 8.11 0.00 37.14 2.57
84 85 1.368345 CGCCGCATGTGAGGAATCAA 61.368 55.000 8.11 0.00 37.14 2.57
85 86 1.027357 GCCGCATGTGAGGAATCAAT 58.973 50.000 8.11 0.00 37.14 2.57
86 87 1.268896 GCCGCATGTGAGGAATCAATG 60.269 52.381 8.11 0.00 37.14 2.82
87 88 1.335810 CCGCATGTGAGGAATCAATGG 59.664 52.381 8.11 0.00 37.14 3.16
88 89 2.291365 CGCATGTGAGGAATCAATGGA 58.709 47.619 0.00 0.00 0.00 3.41
89 90 2.684374 CGCATGTGAGGAATCAATGGAA 59.316 45.455 0.00 0.00 0.00 3.53
90 91 3.242969 CGCATGTGAGGAATCAATGGAAG 60.243 47.826 0.00 0.00 0.00 3.46
91 92 3.067742 GCATGTGAGGAATCAATGGAAGG 59.932 47.826 0.00 0.00 0.00 3.46
92 93 2.726821 TGTGAGGAATCAATGGAAGGC 58.273 47.619 0.00 0.00 0.00 4.35
93 94 2.309755 TGTGAGGAATCAATGGAAGGCT 59.690 45.455 0.00 0.00 0.00 4.58
94 95 2.686915 GTGAGGAATCAATGGAAGGCTG 59.313 50.000 0.00 0.00 0.00 4.85
95 96 2.577563 TGAGGAATCAATGGAAGGCTGA 59.422 45.455 0.00 0.00 0.00 4.26
96 97 2.948315 GAGGAATCAATGGAAGGCTGAC 59.052 50.000 0.00 0.00 0.00 3.51
97 98 2.027385 GGAATCAATGGAAGGCTGACC 58.973 52.381 4.34 4.34 0.00 4.02
98 99 1.672881 GAATCAATGGAAGGCTGACCG 59.327 52.381 6.53 0.00 42.76 4.79
99 100 0.911769 ATCAATGGAAGGCTGACCGA 59.088 50.000 6.53 0.00 42.76 4.69
100 101 0.036388 TCAATGGAAGGCTGACCGAC 60.036 55.000 6.53 0.00 42.76 4.79
101 102 1.079127 AATGGAAGGCTGACCGACG 60.079 57.895 6.53 0.00 42.76 5.12
102 103 2.521958 AATGGAAGGCTGACCGACGG 62.522 60.000 13.61 13.61 42.76 4.79
103 104 4.452733 GGAAGGCTGACCGACGGG 62.453 72.222 20.00 0.98 42.76 5.28
121 122 3.357504 GCAGCCTTGGCATTGATTC 57.642 52.632 14.54 0.00 0.00 2.52
122 123 0.179092 GCAGCCTTGGCATTGATTCC 60.179 55.000 14.54 0.00 0.00 3.01
123 124 0.462789 CAGCCTTGGCATTGATTCCC 59.537 55.000 14.54 0.00 0.00 3.97
124 125 0.688749 AGCCTTGGCATTGATTCCCC 60.689 55.000 14.54 0.00 0.00 4.81
125 126 2.019897 GCCTTGGCATTGATTCCCCG 62.020 60.000 6.79 0.00 0.00 5.73
126 127 1.438814 CTTGGCATTGATTCCCCGC 59.561 57.895 0.00 0.00 0.00 6.13
127 128 2.340453 CTTGGCATTGATTCCCCGCG 62.340 60.000 0.00 0.00 0.00 6.46
128 129 3.595758 GGCATTGATTCCCCGCGG 61.596 66.667 21.04 21.04 0.00 6.46
129 130 3.595758 GCATTGATTCCCCGCGGG 61.596 66.667 37.99 37.99 46.11 6.13
144 145 2.747686 GGGAAACCGAGGCTGTGA 59.252 61.111 0.00 0.00 43.64 3.58
145 146 1.376037 GGGAAACCGAGGCTGTGAG 60.376 63.158 0.00 0.00 43.64 3.51
146 147 1.376037 GGAAACCGAGGCTGTGAGG 60.376 63.158 0.00 0.00 0.00 3.86
147 148 1.671742 GAAACCGAGGCTGTGAGGA 59.328 57.895 0.00 0.00 0.00 3.71
148 149 0.670854 GAAACCGAGGCTGTGAGGAC 60.671 60.000 0.00 0.00 0.00 3.85
149 150 2.436087 AAACCGAGGCTGTGAGGACG 62.436 60.000 0.00 0.00 0.00 4.79
150 151 3.062466 CCGAGGCTGTGAGGACGA 61.062 66.667 0.00 0.00 0.00 4.20
151 152 2.179517 CGAGGCTGTGAGGACGAC 59.820 66.667 0.00 0.00 0.00 4.34
152 153 2.179517 GAGGCTGTGAGGACGACG 59.820 66.667 0.00 0.00 0.00 5.12
153 154 2.282251 AGGCTGTGAGGACGACGA 60.282 61.111 0.00 0.00 0.00 4.20
154 155 2.179517 GGCTGTGAGGACGACGAG 59.820 66.667 0.00 0.00 0.00 4.18
155 156 2.179517 GCTGTGAGGACGACGAGG 59.820 66.667 0.00 0.00 0.00 4.63
156 157 2.179517 CTGTGAGGACGACGAGGC 59.820 66.667 0.00 0.00 0.00 4.70
157 158 3.669036 CTGTGAGGACGACGAGGCG 62.669 68.421 0.00 0.00 37.29 5.52
175 176 4.778415 CGTGGGTCGCTGACTCGG 62.778 72.222 8.26 0.00 35.49 4.63
193 194 3.178539 CGAGCCCGCCTTTCTTTC 58.821 61.111 0.00 0.00 0.00 2.62
194 195 2.740714 CGAGCCCGCCTTTCTTTCG 61.741 63.158 0.00 0.00 0.00 3.46
195 196 3.040414 GAGCCCGCCTTTCTTTCGC 62.040 63.158 0.00 0.00 0.00 4.70
196 197 4.460873 GCCCGCCTTTCTTTCGCG 62.461 66.667 0.00 0.00 45.32 5.87
197 198 4.460873 CCCGCCTTTCTTTCGCGC 62.461 66.667 0.00 0.00 44.42 6.86
198 199 4.460873 CCGCCTTTCTTTCGCGCC 62.461 66.667 0.00 0.00 44.42 6.53
199 200 3.722295 CGCCTTTCTTTCGCGCCA 61.722 61.111 0.00 0.00 39.39 5.69
200 201 2.642700 GCCTTTCTTTCGCGCCAA 59.357 55.556 0.00 0.00 0.00 4.52
201 202 1.007849 GCCTTTCTTTCGCGCCAAA 60.008 52.632 0.00 0.00 0.00 3.28
202 203 0.388520 GCCTTTCTTTCGCGCCAAAT 60.389 50.000 0.00 0.00 0.00 2.32
203 204 1.934849 GCCTTTCTTTCGCGCCAAATT 60.935 47.619 0.00 0.00 0.00 1.82
204 205 1.985684 CCTTTCTTTCGCGCCAAATTC 59.014 47.619 0.00 0.00 0.00 2.17
205 206 1.643810 CTTTCTTTCGCGCCAAATTCG 59.356 47.619 0.00 0.00 0.00 3.34
206 207 0.869068 TTCTTTCGCGCCAAATTCGA 59.131 45.000 0.00 0.00 0.00 3.71
207 208 1.083489 TCTTTCGCGCCAAATTCGAT 58.917 45.000 0.00 0.00 31.96 3.59
208 209 1.466950 TCTTTCGCGCCAAATTCGATT 59.533 42.857 0.00 0.00 31.96 3.34
209 210 1.578915 CTTTCGCGCCAAATTCGATTG 59.421 47.619 0.00 0.00 31.96 2.67
210 211 0.796491 TTCGCGCCAAATTCGATTGC 60.796 50.000 0.00 0.00 31.96 3.56
211 212 1.226379 CGCGCCAAATTCGATTGCT 60.226 52.632 0.00 0.00 0.00 3.91
212 213 1.196130 CGCGCCAAATTCGATTGCTC 61.196 55.000 0.00 0.00 0.00 4.26
213 214 0.867329 GCGCCAAATTCGATTGCTCC 60.867 55.000 0.00 0.00 0.00 4.70
214 215 0.248621 CGCCAAATTCGATTGCTCCC 60.249 55.000 0.00 0.00 0.00 4.30
215 216 0.248621 GCCAAATTCGATTGCTCCCG 60.249 55.000 0.00 0.00 0.00 5.14
216 217 0.248621 CCAAATTCGATTGCTCCCGC 60.249 55.000 0.00 0.00 0.00 6.13
217 218 0.589729 CAAATTCGATTGCTCCCGCG 60.590 55.000 0.00 0.00 39.65 6.46
218 219 2.322999 AAATTCGATTGCTCCCGCGC 62.323 55.000 0.00 0.00 39.65 6.86
257 258 4.547367 CGGGTTCGGCCTGGATCC 62.547 72.222 4.20 4.20 40.02 3.36
269 270 4.910585 GGATCCGCCGACGCCAAT 62.911 66.667 0.00 0.00 38.22 3.16
270 271 2.895372 GATCCGCCGACGCCAATT 60.895 61.111 0.00 0.00 38.22 2.32
271 272 2.437716 ATCCGCCGACGCCAATTT 60.438 55.556 0.00 0.00 38.22 1.82
272 273 2.374877 GATCCGCCGACGCCAATTTC 62.375 60.000 0.00 0.00 38.22 2.17
273 274 3.427425 CCGCCGACGCCAATTTCA 61.427 61.111 0.00 0.00 38.22 2.69
274 275 2.558821 CGCCGACGCCAATTTCAA 59.441 55.556 0.00 0.00 0.00 2.69
275 276 1.136565 CGCCGACGCCAATTTCAAT 59.863 52.632 0.00 0.00 0.00 2.57
276 277 0.861450 CGCCGACGCCAATTTCAATC 60.861 55.000 0.00 0.00 0.00 2.67
277 278 0.525455 GCCGACGCCAATTTCAATCC 60.525 55.000 0.00 0.00 0.00 3.01
278 279 0.808125 CCGACGCCAATTTCAATCCA 59.192 50.000 0.00 0.00 0.00 3.41
279 280 1.201181 CCGACGCCAATTTCAATCCAA 59.799 47.619 0.00 0.00 0.00 3.53
280 281 2.250188 CGACGCCAATTTCAATCCAAC 58.750 47.619 0.00 0.00 0.00 3.77
281 282 2.606108 GACGCCAATTTCAATCCAACC 58.394 47.619 0.00 0.00 0.00 3.77
282 283 2.231235 GACGCCAATTTCAATCCAACCT 59.769 45.455 0.00 0.00 0.00 3.50
283 284 2.029110 ACGCCAATTTCAATCCAACCTG 60.029 45.455 0.00 0.00 0.00 4.00
284 285 2.230992 CGCCAATTTCAATCCAACCTGA 59.769 45.455 0.00 0.00 0.00 3.86
285 286 3.588955 GCCAATTTCAATCCAACCTGAC 58.411 45.455 0.00 0.00 0.00 3.51
286 287 3.006752 GCCAATTTCAATCCAACCTGACA 59.993 43.478 0.00 0.00 0.00 3.58
287 288 4.502950 GCCAATTTCAATCCAACCTGACAA 60.503 41.667 0.00 0.00 0.00 3.18
288 289 5.609423 CCAATTTCAATCCAACCTGACAAA 58.391 37.500 0.00 0.00 0.00 2.83
289 290 6.054295 CCAATTTCAATCCAACCTGACAAAA 58.946 36.000 0.00 0.00 0.00 2.44
290 291 6.541641 CCAATTTCAATCCAACCTGACAAAAA 59.458 34.615 0.00 0.00 0.00 1.94
307 308 1.852633 AAAATAGGCTTCTGGGGTGC 58.147 50.000 0.00 0.00 0.00 5.01
308 309 0.394352 AAATAGGCTTCTGGGGTGCG 60.394 55.000 0.00 0.00 0.00 5.34
309 310 1.271840 AATAGGCTTCTGGGGTGCGA 61.272 55.000 0.00 0.00 0.00 5.10
310 311 1.972660 ATAGGCTTCTGGGGTGCGAC 61.973 60.000 0.00 0.00 0.00 5.19
311 312 4.021925 GGCTTCTGGGGTGCGACT 62.022 66.667 0.00 0.00 0.00 4.18
312 313 2.743928 GCTTCTGGGGTGCGACTG 60.744 66.667 0.00 0.00 0.00 3.51
313 314 2.046892 CTTCTGGGGTGCGACTGG 60.047 66.667 0.00 0.00 0.00 4.00
314 315 4.329545 TTCTGGGGTGCGACTGGC 62.330 66.667 0.00 0.00 43.96 4.85
320 321 4.778143 GGTGCGACTGGCCGGATT 62.778 66.667 21.41 0.00 42.61 3.01
321 322 2.746277 GTGCGACTGGCCGGATTT 60.746 61.111 21.41 0.00 42.61 2.17
322 323 2.033448 TGCGACTGGCCGGATTTT 59.967 55.556 21.41 0.00 42.61 1.82
323 324 1.602323 TGCGACTGGCCGGATTTTT 60.602 52.632 21.41 0.00 42.61 1.94
324 325 0.321741 TGCGACTGGCCGGATTTTTA 60.322 50.000 21.41 0.00 42.61 1.52
325 326 0.377203 GCGACTGGCCGGATTTTTAG 59.623 55.000 21.41 0.00 34.80 1.85
326 327 2.010043 GCGACTGGCCGGATTTTTAGA 61.010 52.381 21.41 0.00 34.80 2.10
327 328 1.664151 CGACTGGCCGGATTTTTAGAC 59.336 52.381 21.41 0.00 0.00 2.59
328 329 1.664151 GACTGGCCGGATTTTTAGACG 59.336 52.381 21.41 0.00 0.00 4.18
329 330 1.002773 ACTGGCCGGATTTTTAGACGT 59.997 47.619 21.41 0.00 0.00 4.34
330 331 1.664151 CTGGCCGGATTTTTAGACGTC 59.336 52.381 5.28 7.70 0.00 4.34
331 332 0.648958 GGCCGGATTTTTAGACGTCG 59.351 55.000 5.05 0.00 0.00 5.12
332 333 0.648958 GCCGGATTTTTAGACGTCGG 59.351 55.000 5.05 6.02 39.07 4.79
333 334 0.648958 CCGGATTTTTAGACGTCGGC 59.351 55.000 10.46 0.00 0.00 5.54
334 335 0.296642 CGGATTTTTAGACGTCGGCG 59.703 55.000 8.42 8.42 44.93 6.46
335 336 0.025898 GGATTTTTAGACGTCGGCGC 59.974 55.000 10.50 0.00 42.83 6.53
336 337 0.997196 GATTTTTAGACGTCGGCGCT 59.003 50.000 10.50 10.74 42.83 5.92
337 338 2.187707 GATTTTTAGACGTCGGCGCTA 58.812 47.619 10.50 9.58 42.83 4.26
338 339 2.063156 TTTTTAGACGTCGGCGCTAA 57.937 45.000 10.50 15.43 42.83 3.09
339 340 2.063156 TTTTAGACGTCGGCGCTAAA 57.937 45.000 24.62 24.62 40.81 1.85
340 341 2.063156 TTTAGACGTCGGCGCTAAAA 57.937 45.000 25.54 15.08 40.26 1.52
341 342 2.063156 TTAGACGTCGGCGCTAAAAA 57.937 45.000 19.02 4.29 42.83 1.94
357 358 3.924576 AAAAAGGCCTGTGACCTGT 57.075 47.368 5.69 0.00 37.67 4.00
358 359 2.159179 AAAAAGGCCTGTGACCTGTT 57.841 45.000 5.69 0.00 36.21 3.16
359 360 1.402787 AAAAGGCCTGTGACCTGTTG 58.597 50.000 5.69 0.00 37.67 3.33
360 361 0.468029 AAAGGCCTGTGACCTGTTGG 60.468 55.000 5.69 0.00 37.67 3.77
361 362 2.282462 GGCCTGTGACCTGTTGGG 60.282 66.667 0.00 0.00 41.89 4.12
362 363 2.282462 GCCTGTGACCTGTTGGGG 60.282 66.667 0.00 0.00 40.03 4.96
363 364 2.829384 GCCTGTGACCTGTTGGGGA 61.829 63.158 0.00 0.00 40.03 4.81
364 365 1.073199 CCTGTGACCTGTTGGGGAC 59.927 63.158 0.00 0.00 40.03 4.46
365 366 1.301716 CTGTGACCTGTTGGGGACG 60.302 63.158 0.00 0.00 40.03 4.79
366 367 2.040009 CTGTGACCTGTTGGGGACGT 62.040 60.000 0.00 0.00 40.03 4.34
367 368 1.597027 GTGACCTGTTGGGGACGTG 60.597 63.158 0.00 0.00 40.03 4.49
368 369 1.762858 TGACCTGTTGGGGACGTGA 60.763 57.895 0.00 0.00 40.03 4.35
369 370 1.301479 GACCTGTTGGGGACGTGAC 60.301 63.158 0.00 0.00 40.03 3.67
370 371 1.755393 GACCTGTTGGGGACGTGACT 61.755 60.000 0.00 0.00 40.03 3.41
371 372 1.301716 CCTGTTGGGGACGTGACTG 60.302 63.158 0.00 0.00 0.00 3.51
372 373 1.301716 CTGTTGGGGACGTGACTGG 60.302 63.158 0.00 0.00 0.00 4.00
373 374 1.754380 CTGTTGGGGACGTGACTGGA 61.754 60.000 0.00 0.00 0.00 3.86
374 375 1.004918 GTTGGGGACGTGACTGGAG 60.005 63.158 0.00 0.00 0.00 3.86
375 376 1.152419 TTGGGGACGTGACTGGAGA 60.152 57.895 0.00 0.00 0.00 3.71
376 377 0.544357 TTGGGGACGTGACTGGAGAT 60.544 55.000 0.00 0.00 0.00 2.75
377 378 1.257750 TGGGGACGTGACTGGAGATG 61.258 60.000 0.00 0.00 0.00 2.90
378 379 1.153549 GGGACGTGACTGGAGATGC 60.154 63.158 0.00 0.00 0.00 3.91
379 380 1.608717 GGGACGTGACTGGAGATGCT 61.609 60.000 0.00 0.00 0.00 3.79
380 381 0.247736 GGACGTGACTGGAGATGCTT 59.752 55.000 0.00 0.00 0.00 3.91
381 382 1.338200 GGACGTGACTGGAGATGCTTT 60.338 52.381 0.00 0.00 0.00 3.51
382 383 1.996191 GACGTGACTGGAGATGCTTTC 59.004 52.381 0.00 0.00 0.00 2.62
383 384 1.344438 ACGTGACTGGAGATGCTTTCA 59.656 47.619 0.00 0.00 0.00 2.69
384 385 2.027745 ACGTGACTGGAGATGCTTTCAT 60.028 45.455 0.00 0.00 35.17 2.57
385 386 3.195610 ACGTGACTGGAGATGCTTTCATA 59.804 43.478 0.00 0.00 31.96 2.15
386 387 3.553511 CGTGACTGGAGATGCTTTCATAC 59.446 47.826 0.00 0.00 31.96 2.39
387 388 3.553511 GTGACTGGAGATGCTTTCATACG 59.446 47.826 0.00 0.00 31.96 3.06
388 389 3.195610 TGACTGGAGATGCTTTCATACGT 59.804 43.478 0.00 0.00 31.96 3.57
389 390 3.525537 ACTGGAGATGCTTTCATACGTG 58.474 45.455 0.00 0.00 31.96 4.49
390 391 3.055819 ACTGGAGATGCTTTCATACGTGT 60.056 43.478 0.00 0.00 31.96 4.49
391 392 3.935203 CTGGAGATGCTTTCATACGTGTT 59.065 43.478 0.00 0.00 31.96 3.32
392 393 4.323417 TGGAGATGCTTTCATACGTGTTT 58.677 39.130 0.00 0.00 31.96 2.83
393 394 4.759693 TGGAGATGCTTTCATACGTGTTTT 59.240 37.500 0.00 0.00 31.96 2.43
394 395 5.935206 TGGAGATGCTTTCATACGTGTTTTA 59.065 36.000 0.00 0.00 31.96 1.52
395 396 6.128391 TGGAGATGCTTTCATACGTGTTTTAC 60.128 38.462 0.00 0.00 31.96 2.01
396 397 6.092259 GGAGATGCTTTCATACGTGTTTTACT 59.908 38.462 0.00 0.00 31.96 2.24
397 398 7.061752 AGATGCTTTCATACGTGTTTTACTC 57.938 36.000 0.00 0.00 31.96 2.59
398 399 6.874134 AGATGCTTTCATACGTGTTTTACTCT 59.126 34.615 0.00 0.00 31.96 3.24
399 400 6.462073 TGCTTTCATACGTGTTTTACTCTC 57.538 37.500 0.00 0.00 0.00 3.20
400 401 5.118050 TGCTTTCATACGTGTTTTACTCTCG 59.882 40.000 0.00 0.00 0.00 4.04
401 402 5.118203 GCTTTCATACGTGTTTTACTCTCGT 59.882 40.000 0.00 0.00 38.30 4.18
402 403 6.442487 TTTCATACGTGTTTTACTCTCGTG 57.558 37.500 0.00 0.00 36.24 4.35
403 404 3.916172 TCATACGTGTTTTACTCTCGTGC 59.084 43.478 0.00 0.00 36.24 5.34
404 405 2.503920 ACGTGTTTTACTCTCGTGCT 57.496 45.000 0.00 0.00 33.55 4.40
439 440 3.181496 GGAATTCGAGACATTTGCCTTCC 60.181 47.826 0.00 0.00 0.00 3.46
452 453 1.421268 TGCCTTCCAGTTGACAGACAT 59.579 47.619 0.00 0.00 0.00 3.06
512 515 3.508762 AGTTGCGGTACAGACTTTATCG 58.491 45.455 0.00 0.00 0.00 2.92
517 520 3.488047 GCGGTACAGACTTTATCGCTGTA 60.488 47.826 17.01 0.00 42.40 2.74
530 533 8.414778 ACTTTATCGCTGTAGAAGTATTTAGCT 58.585 33.333 0.00 0.00 0.00 3.32
533 536 9.674824 TTATCGCTGTAGAAGTATTTAGCTAAC 57.325 33.333 5.45 0.00 0.00 2.34
534 537 7.092137 TCGCTGTAGAAGTATTTAGCTAACA 57.908 36.000 5.45 0.00 0.00 2.41
540 543 8.799367 TGTAGAAGTATTTAGCTAACACACAGA 58.201 33.333 5.45 0.00 0.00 3.41
546 549 2.393271 AGCTAACACACAGATCAGCC 57.607 50.000 0.00 0.00 0.00 4.85
613 616 2.564062 TGAGCTCATGATCTGTGTGTGA 59.436 45.455 13.74 0.00 0.00 3.58
614 617 3.007182 TGAGCTCATGATCTGTGTGTGAA 59.993 43.478 13.74 0.00 0.00 3.18
627 632 1.269778 TGTGTGAAGAGGAAGCACTCG 60.270 52.381 0.00 0.00 42.31 4.18
637 642 1.856265 GAAGCACTCGGCCAAACCTG 61.856 60.000 2.24 0.00 46.50 4.00
644 649 2.047939 GGCCAAACCTGCATGCAC 60.048 61.111 18.46 4.82 34.51 4.57
751 758 1.512156 CGAGTCAACCCAAAACCCCG 61.512 60.000 0.00 0.00 0.00 5.73
770 777 1.566018 GAAGCCACACGAACCGGAAG 61.566 60.000 9.46 0.32 0.00 3.46
943 962 1.006571 ACGTAGTGCACCACTTCCG 60.007 57.895 14.63 9.32 42.59 4.30
960 979 3.541996 TCCGCTAAAAGATCATCAGCA 57.458 42.857 0.00 0.00 32.46 4.41
1252 1283 0.967887 CTTCCTCCTCTCGCTCACCA 60.968 60.000 0.00 0.00 0.00 4.17
1295 1329 0.178973 TCCGTCTCTCAGTGGTGGAA 60.179 55.000 0.00 0.00 0.00 3.53
2014 2096 6.310941 AGCAGTACTGTGTATAGGATGATCT 58.689 40.000 23.44 4.58 0.00 2.75
2015 2097 6.208402 AGCAGTACTGTGTATAGGATGATCTG 59.792 42.308 23.44 0.00 0.00 2.90
2016 2098 6.385843 CAGTACTGTGTATAGGATGATCTGC 58.614 44.000 15.06 0.00 0.00 4.26
2017 2099 6.208402 CAGTACTGTGTATAGGATGATCTGCT 59.792 42.308 15.06 0.00 0.00 4.24
2018 2100 6.780031 AGTACTGTGTATAGGATGATCTGCTT 59.220 38.462 0.00 0.00 0.00 3.91
2019 2101 6.491714 ACTGTGTATAGGATGATCTGCTTT 57.508 37.500 0.00 0.00 0.00 3.51
2020 2102 6.286758 ACTGTGTATAGGATGATCTGCTTTG 58.713 40.000 0.00 0.00 0.00 2.77
2054 2154 2.548057 TGTTTCTTGCGTGTGATCTTCC 59.452 45.455 0.00 0.00 0.00 3.46
2070 2170 2.125106 CCCAGAGGCGTTGCTACC 60.125 66.667 0.00 0.00 0.00 3.18
2111 2212 3.134458 CAGGCCTATCGGTTCAGAAATC 58.866 50.000 3.98 0.00 0.00 2.17
2141 2242 4.420168 CGCCTGTTCAGAAACAAGAAAAA 58.580 39.130 1.00 0.00 44.53 1.94
2142 2243 4.500477 CGCCTGTTCAGAAACAAGAAAAAG 59.500 41.667 1.00 0.00 44.53 2.27
2143 2244 5.650543 GCCTGTTCAGAAACAAGAAAAAGA 58.349 37.500 1.00 0.00 44.53 2.52
2145 2246 6.268566 CCTGTTCAGAAACAAGAAAAAGAGG 58.731 40.000 1.00 0.00 44.53 3.69
2152 2253 6.757947 CAGAAACAAGAAAAAGAGGAATTGCA 59.242 34.615 0.00 0.00 0.00 4.08
2171 2272 2.730094 CACTGGCTGGGCACAAAC 59.270 61.111 0.00 0.00 0.00 2.93
2174 2275 0.537371 ACTGGCTGGGCACAAACTAC 60.537 55.000 0.00 0.00 0.00 2.73
2175 2276 0.537143 CTGGCTGGGCACAAACTACA 60.537 55.000 0.00 0.00 0.00 2.74
2176 2277 0.106469 TGGCTGGGCACAAACTACAA 60.106 50.000 0.00 0.00 0.00 2.41
2177 2278 0.313987 GGCTGGGCACAAACTACAAC 59.686 55.000 0.00 0.00 0.00 3.32
2178 2279 1.318576 GCTGGGCACAAACTACAACT 58.681 50.000 0.00 0.00 0.00 3.16
2179 2280 1.001378 GCTGGGCACAAACTACAACTG 60.001 52.381 0.00 0.00 0.00 3.16
2180 2281 2.297701 CTGGGCACAAACTACAACTGT 58.702 47.619 0.00 0.00 0.00 3.55
2182 2283 2.294074 GGGCACAAACTACAACTGTGA 58.706 47.619 5.65 0.00 42.48 3.58
2183 2284 2.032924 GGGCACAAACTACAACTGTGAC 59.967 50.000 5.65 2.17 46.45 3.67
2184 2285 2.680841 GGCACAAACTACAACTGTGACA 59.319 45.455 5.65 0.00 46.42 3.58
2185 2286 3.315191 GGCACAAACTACAACTGTGACAT 59.685 43.478 5.65 0.00 46.42 3.06
2186 2287 4.282068 GCACAAACTACAACTGTGACATG 58.718 43.478 5.65 0.00 42.48 3.21
2187 2288 4.201910 GCACAAACTACAACTGTGACATGT 60.202 41.667 0.00 0.00 42.48 3.21
2188 2289 5.007234 GCACAAACTACAACTGTGACATGTA 59.993 40.000 0.00 0.00 42.48 2.29
2193 2294 5.773575 ACTACAACTGTGACATGTACTGAG 58.226 41.667 0.00 0.00 0.00 3.35
2194 2295 3.995199 ACAACTGTGACATGTACTGAGG 58.005 45.455 0.00 3.35 0.00 3.86
2199 2300 4.179298 CTGTGACATGTACTGAGGATGTG 58.821 47.826 0.00 0.00 30.39 3.21
2200 2301 3.831911 TGTGACATGTACTGAGGATGTGA 59.168 43.478 0.00 0.00 30.39 3.58
2207 2308 6.381133 ACATGTACTGAGGATGTGAGTATTCA 59.619 38.462 0.00 0.00 0.00 2.57
2232 2333 5.794650 CAATAATGCACGCATATGACAAC 57.205 39.130 6.97 0.00 35.31 3.32
2247 2348 8.396390 GCATATGACAACTTATCATCATGGATC 58.604 37.037 6.97 0.00 37.89 3.36
2254 2355 6.624352 ACTTATCATCATGGATCCAAAACG 57.376 37.500 20.67 8.37 0.00 3.60
2262 2363 5.063204 TCATGGATCCAAAACGGTGATATC 58.937 41.667 20.67 0.00 35.57 1.63
2264 2365 3.146847 GGATCCAAAACGGTGATATCCC 58.853 50.000 6.95 0.29 35.57 3.85
2291 2392 8.515414 CCAAAGAACTTTCATCCTAAACCTAAG 58.485 37.037 0.00 0.00 0.00 2.18
2297 2398 8.422577 ACTTTCATCCTAAACCTAAGCAAAAT 57.577 30.769 0.00 0.00 0.00 1.82
2300 2401 6.731467 TCATCCTAAACCTAAGCAAAATCCT 58.269 36.000 0.00 0.00 0.00 3.24
2306 2407 7.342026 CCTAAACCTAAGCAAAATCCTGGTAAT 59.658 37.037 0.00 0.00 0.00 1.89
2308 2409 6.079712 ACCTAAGCAAAATCCTGGTAATCT 57.920 37.500 0.00 0.00 0.00 2.40
2309 2410 6.494059 ACCTAAGCAAAATCCTGGTAATCTT 58.506 36.000 0.00 0.00 0.00 2.40
2315 2417 8.593945 AGCAAAATCCTGGTAATCTTGATTAA 57.406 30.769 4.83 0.00 0.00 1.40
2343 2445 9.886132 TTAGTTAGTCATATTTCTCCTGGAAAC 57.114 33.333 0.00 0.00 45.29 2.78
2344 2446 7.042335 AGTTAGTCATATTTCTCCTGGAAACG 58.958 38.462 0.00 0.00 45.29 3.60
2345 2447 4.770795 AGTCATATTTCTCCTGGAAACGG 58.229 43.478 0.00 0.00 45.29 4.44
2346 2448 4.469945 AGTCATATTTCTCCTGGAAACGGA 59.530 41.667 0.00 0.00 45.29 4.69
2361 2463 5.184287 TGGAAACGGAGGGAAAATATTTGAC 59.816 40.000 0.39 0.00 0.00 3.18
2365 2467 4.189231 CGGAGGGAAAATATTTGACTCGT 58.811 43.478 0.39 0.00 0.00 4.18
2400 2502 8.561738 AATAAAGTAGAAGATGGAAAAAGCGA 57.438 30.769 0.00 0.00 0.00 4.93
2401 2503 8.738645 ATAAAGTAGAAGATGGAAAAAGCGAT 57.261 30.769 0.00 0.00 0.00 4.58
2416 2518 8.707839 GGAAAAAGCGATGAAAATCAATACAAA 58.292 29.630 0.00 0.00 0.00 2.83
2437 2539 1.812571 CATGACCACTTGCCAACTACC 59.187 52.381 0.00 0.00 0.00 3.18
2448 2550 0.908180 CCAACTACCCCCTCCGTTCT 60.908 60.000 0.00 0.00 0.00 3.01
2516 2621 6.767456 TGTTTGGCCAACATCATAGAAAAAT 58.233 32.000 20.35 0.00 40.71 1.82
2599 2709 6.169557 TCATACTTGGCACCGTAGATATTT 57.830 37.500 0.00 0.00 0.00 1.40
2600 2710 6.588204 TCATACTTGGCACCGTAGATATTTT 58.412 36.000 0.00 0.00 0.00 1.82
2631 2749 1.542915 AGGTCAAACATGCACATGCTC 59.457 47.619 10.50 0.00 42.39 4.26
2632 2750 1.270274 GGTCAAACATGCACATGCTCA 59.730 47.619 10.50 0.00 42.39 4.26
2636 2754 2.717580 AACATGCACATGCTCAACTG 57.282 45.000 10.50 0.00 42.39 3.16
2698 2819 2.229792 TCCAAAGCATGAACACTCACC 58.770 47.619 0.00 0.00 33.30 4.02
2704 2825 0.884259 CATGAACACTCACCACCGCA 60.884 55.000 0.00 0.00 33.30 5.69
2709 2830 2.591715 ACTCACCACCGCACAAGC 60.592 61.111 0.00 0.00 37.42 4.01
2713 2834 1.968017 CACCACCGCACAAGCAGAT 60.968 57.895 0.00 0.00 42.27 2.90
2762 2883 0.035820 TAAAGCCCGGACACATGGAC 60.036 55.000 0.73 0.00 0.00 4.02
2764 2885 4.796495 GCCCGGACACATGGACCC 62.796 72.222 0.73 0.00 0.00 4.46
2769 2890 2.291043 GGACACATGGACCCCGAGT 61.291 63.158 0.00 0.00 0.00 4.18
2770 2891 1.677552 GACACATGGACCCCGAGTT 59.322 57.895 0.00 0.00 0.00 3.01
2771 2892 0.036306 GACACATGGACCCCGAGTTT 59.964 55.000 0.00 0.00 0.00 2.66
2772 2893 0.250727 ACACATGGACCCCGAGTTTG 60.251 55.000 0.00 0.00 0.00 2.93
2773 2894 1.303317 ACATGGACCCCGAGTTTGC 60.303 57.895 0.00 0.00 0.00 3.68
2774 2895 1.303236 CATGGACCCCGAGTTTGCA 60.303 57.895 0.00 0.00 0.00 4.08
2775 2896 0.893270 CATGGACCCCGAGTTTGCAA 60.893 55.000 0.00 0.00 0.00 4.08
2776 2897 0.178975 ATGGACCCCGAGTTTGCAAA 60.179 50.000 8.05 8.05 0.00 3.68
2777 2898 0.821711 TGGACCCCGAGTTTGCAAAG 60.822 55.000 13.26 1.95 0.00 2.77
2778 2899 1.524008 GGACCCCGAGTTTGCAAAGG 61.524 60.000 13.26 12.34 0.00 3.11
2779 2900 0.822121 GACCCCGAGTTTGCAAAGGT 60.822 55.000 17.29 17.29 0.00 3.50
2780 2901 0.475044 ACCCCGAGTTTGCAAAGGTA 59.525 50.000 13.26 0.00 0.00 3.08
2781 2902 0.879090 CCCCGAGTTTGCAAAGGTAC 59.121 55.000 13.26 0.81 0.00 3.34
2782 2903 0.879090 CCCGAGTTTGCAAAGGTACC 59.121 55.000 13.26 2.73 0.00 3.34
2783 2904 0.879090 CCGAGTTTGCAAAGGTACCC 59.121 55.000 13.26 0.00 0.00 3.69
2784 2905 0.879090 CGAGTTTGCAAAGGTACCCC 59.121 55.000 13.26 0.00 0.00 4.95
2785 2906 1.816183 CGAGTTTGCAAAGGTACCCCA 60.816 52.381 13.26 0.00 0.00 4.96
2786 2907 2.312390 GAGTTTGCAAAGGTACCCCAA 58.688 47.619 13.26 4.58 0.00 4.12
2787 2908 2.696187 GAGTTTGCAAAGGTACCCCAAA 59.304 45.455 13.26 10.46 0.00 3.28
2788 2909 3.108376 AGTTTGCAAAGGTACCCCAAAA 58.892 40.909 13.26 0.05 0.00 2.44
2789 2910 3.519913 AGTTTGCAAAGGTACCCCAAAAA 59.480 39.130 13.26 0.79 0.00 1.94
2812 2933 5.687770 AAAACACAACGATCATGACATCA 57.312 34.783 0.00 0.00 0.00 3.07
2813 2934 5.687770 AAACACAACGATCATGACATCAA 57.312 34.783 0.00 0.00 0.00 2.57
2814 2935 5.687770 AACACAACGATCATGACATCAAA 57.312 34.783 0.00 0.00 0.00 2.69
2815 2936 5.687770 ACACAACGATCATGACATCAAAA 57.312 34.783 0.00 0.00 0.00 2.44
2816 2937 6.070897 ACACAACGATCATGACATCAAAAA 57.929 33.333 0.00 0.00 0.00 1.94
2834 2955 3.465122 AAAACACAATATCGACGGTGC 57.535 42.857 0.00 0.00 34.69 5.01
2835 2956 2.087501 AACACAATATCGACGGTGCA 57.912 45.000 0.00 0.00 34.69 4.57
2836 2957 2.309528 ACACAATATCGACGGTGCAT 57.690 45.000 0.00 0.00 34.69 3.96
2837 2958 2.201732 ACACAATATCGACGGTGCATC 58.798 47.619 0.00 0.00 34.69 3.91
2838 2959 1.526887 CACAATATCGACGGTGCATCC 59.473 52.381 0.00 0.00 0.00 3.51
2839 2960 1.138069 ACAATATCGACGGTGCATCCA 59.862 47.619 0.00 0.00 35.57 3.41
2840 2961 2.224281 ACAATATCGACGGTGCATCCAT 60.224 45.455 0.00 0.00 35.57 3.41
2841 2962 2.370281 ATATCGACGGTGCATCCATC 57.630 50.000 0.00 0.00 35.57 3.51
2847 2968 3.728474 GGTGCATCCATCGAGCAG 58.272 61.111 0.00 0.00 39.21 4.24
2848 2969 3.020627 GTGCATCCATCGAGCAGC 58.979 61.111 0.00 0.00 39.21 5.25
2849 2970 2.203112 TGCATCCATCGAGCAGCC 60.203 61.111 0.00 0.00 33.75 4.85
2850 2971 3.344215 GCATCCATCGAGCAGCCG 61.344 66.667 0.00 0.00 0.00 5.52
2851 2972 3.344215 CATCCATCGAGCAGCCGC 61.344 66.667 0.00 0.00 38.99 6.53
2852 2973 4.957684 ATCCATCGAGCAGCCGCG 62.958 66.667 0.00 0.00 45.49 6.46
2866 2987 2.959372 CGCGGACGGCTATCCATA 59.041 61.111 0.00 0.00 38.87 2.74
2867 2988 1.154016 CGCGGACGGCTATCCATAG 60.154 63.158 0.00 0.00 38.87 2.23
2875 2996 2.832931 GCTATCCATAGCGCCACTG 58.167 57.895 2.29 0.00 45.30 3.66
2876 2997 0.034059 GCTATCCATAGCGCCACTGT 59.966 55.000 2.29 0.00 45.30 3.55
2877 2998 1.541233 GCTATCCATAGCGCCACTGTT 60.541 52.381 2.29 0.00 45.30 3.16
2878 2999 2.408050 CTATCCATAGCGCCACTGTTC 58.592 52.381 2.29 0.00 0.00 3.18
2879 3000 0.833287 ATCCATAGCGCCACTGTTCT 59.167 50.000 2.29 0.00 0.00 3.01
2880 3001 0.613260 TCCATAGCGCCACTGTTCTT 59.387 50.000 2.29 0.00 0.00 2.52
2881 3002 1.828595 TCCATAGCGCCACTGTTCTTA 59.171 47.619 2.29 0.00 0.00 2.10
2882 3003 2.434336 TCCATAGCGCCACTGTTCTTAT 59.566 45.455 2.29 0.00 0.00 1.73
2883 3004 2.802816 CCATAGCGCCACTGTTCTTATC 59.197 50.000 2.29 0.00 0.00 1.75
2884 3005 3.493350 CCATAGCGCCACTGTTCTTATCT 60.493 47.826 2.29 0.00 0.00 1.98
2885 3006 2.770164 AGCGCCACTGTTCTTATCTT 57.230 45.000 2.29 0.00 0.00 2.40
2886 3007 3.059352 AGCGCCACTGTTCTTATCTTT 57.941 42.857 2.29 0.00 0.00 2.52
2887 3008 2.744202 AGCGCCACTGTTCTTATCTTTG 59.256 45.455 2.29 0.00 0.00 2.77
2888 3009 2.729156 GCGCCACTGTTCTTATCTTTGC 60.729 50.000 0.00 0.00 0.00 3.68
2889 3010 2.744202 CGCCACTGTTCTTATCTTTGCT 59.256 45.455 0.00 0.00 0.00 3.91
2890 3011 3.189287 CGCCACTGTTCTTATCTTTGCTT 59.811 43.478 0.00 0.00 0.00 3.91
2891 3012 4.391830 CGCCACTGTTCTTATCTTTGCTTA 59.608 41.667 0.00 0.00 0.00 3.09
2892 3013 5.631992 GCCACTGTTCTTATCTTTGCTTAC 58.368 41.667 0.00 0.00 0.00 2.34
2893 3014 5.671329 GCCACTGTTCTTATCTTTGCTTACG 60.671 44.000 0.00 0.00 0.00 3.18
2894 3015 5.163854 CCACTGTTCTTATCTTTGCTTACGG 60.164 44.000 0.00 0.00 0.00 4.02
2895 3016 5.637810 CACTGTTCTTATCTTTGCTTACGGA 59.362 40.000 0.00 0.00 0.00 4.69
2896 3017 6.313905 CACTGTTCTTATCTTTGCTTACGGAT 59.686 38.462 0.00 0.00 0.00 4.18
2897 3018 6.313905 ACTGTTCTTATCTTTGCTTACGGATG 59.686 38.462 0.00 0.00 0.00 3.51
2898 3019 5.584649 TGTTCTTATCTTTGCTTACGGATGG 59.415 40.000 0.00 0.00 0.00 3.51
2899 3020 5.353394 TCTTATCTTTGCTTACGGATGGT 57.647 39.130 0.00 0.00 0.00 3.55
2900 3021 5.741011 TCTTATCTTTGCTTACGGATGGTT 58.259 37.500 0.00 0.00 0.00 3.67
2901 3022 6.177610 TCTTATCTTTGCTTACGGATGGTTT 58.822 36.000 0.00 0.00 0.00 3.27
2902 3023 4.965119 ATCTTTGCTTACGGATGGTTTC 57.035 40.909 0.00 0.00 0.00 2.78
2903 3024 4.015872 TCTTTGCTTACGGATGGTTTCT 57.984 40.909 0.00 0.00 0.00 2.52
2904 3025 4.000988 TCTTTGCTTACGGATGGTTTCTC 58.999 43.478 0.00 0.00 0.00 2.87
2905 3026 3.695830 TTGCTTACGGATGGTTTCTCT 57.304 42.857 0.00 0.00 0.00 3.10
2906 3027 3.695830 TGCTTACGGATGGTTTCTCTT 57.304 42.857 0.00 0.00 0.00 2.85
2907 3028 4.015872 TGCTTACGGATGGTTTCTCTTT 57.984 40.909 0.00 0.00 0.00 2.52
2908 3029 4.000988 TGCTTACGGATGGTTTCTCTTTC 58.999 43.478 0.00 0.00 0.00 2.62
2909 3030 4.000988 GCTTACGGATGGTTTCTCTTTCA 58.999 43.478 0.00 0.00 0.00 2.69
2910 3031 4.636206 GCTTACGGATGGTTTCTCTTTCAT 59.364 41.667 0.00 0.00 0.00 2.57
2911 3032 5.447818 GCTTACGGATGGTTTCTCTTTCATG 60.448 44.000 0.00 0.00 0.00 3.07
2912 3033 4.286297 ACGGATGGTTTCTCTTTCATGA 57.714 40.909 0.00 0.00 0.00 3.07
2913 3034 4.848357 ACGGATGGTTTCTCTTTCATGAT 58.152 39.130 0.00 0.00 0.00 2.45
2914 3035 4.637534 ACGGATGGTTTCTCTTTCATGATG 59.362 41.667 0.00 0.00 0.00 3.07
2915 3036 4.637534 CGGATGGTTTCTCTTTCATGATGT 59.362 41.667 0.00 0.00 0.00 3.06
2916 3037 5.220739 CGGATGGTTTCTCTTTCATGATGTC 60.221 44.000 0.00 0.00 0.00 3.06
2917 3038 5.220739 GGATGGTTTCTCTTTCATGATGTCG 60.221 44.000 0.00 0.00 0.00 4.35
2918 3039 4.002982 TGGTTTCTCTTTCATGATGTCGG 58.997 43.478 0.00 0.00 0.00 4.79
2919 3040 3.375299 GGTTTCTCTTTCATGATGTCGGG 59.625 47.826 0.00 0.00 0.00 5.14
2920 3041 3.981071 TTCTCTTTCATGATGTCGGGT 57.019 42.857 0.00 0.00 0.00 5.28
2921 3042 3.526931 TCTCTTTCATGATGTCGGGTC 57.473 47.619 0.00 0.00 0.00 4.46
2922 3043 2.159240 TCTCTTTCATGATGTCGGGTCG 60.159 50.000 0.00 0.00 0.00 4.79
2923 3044 1.822371 TCTTTCATGATGTCGGGTCGA 59.178 47.619 0.00 0.00 0.00 4.20
2924 3045 2.232696 TCTTTCATGATGTCGGGTCGAA 59.767 45.455 0.00 0.00 37.72 3.71
2925 3046 2.293677 TTCATGATGTCGGGTCGAAG 57.706 50.000 0.00 0.00 37.72 3.79
2926 3047 1.470051 TCATGATGTCGGGTCGAAGA 58.530 50.000 0.00 0.00 37.72 2.87
2939 3060 2.631160 TCGAAGACAAACACCCACAT 57.369 45.000 0.00 0.00 0.00 3.21
2940 3061 2.925724 TCGAAGACAAACACCCACATT 58.074 42.857 0.00 0.00 0.00 2.71
2941 3062 2.875933 TCGAAGACAAACACCCACATTC 59.124 45.455 0.00 0.00 0.00 2.67
2942 3063 2.878406 CGAAGACAAACACCCACATTCT 59.122 45.455 0.00 0.00 0.00 2.40
2943 3064 3.315191 CGAAGACAAACACCCACATTCTT 59.685 43.478 0.00 0.00 0.00 2.52
2944 3065 4.610945 GAAGACAAACACCCACATTCTTG 58.389 43.478 0.00 0.00 0.00 3.02
2945 3066 2.362077 AGACAAACACCCACATTCTTGC 59.638 45.455 0.00 0.00 0.00 4.01
2946 3067 2.100584 GACAAACACCCACATTCTTGCA 59.899 45.455 0.00 0.00 0.00 4.08
2947 3068 2.699846 ACAAACACCCACATTCTTGCAT 59.300 40.909 0.00 0.00 0.00 3.96
2948 3069 3.134442 ACAAACACCCACATTCTTGCATT 59.866 39.130 0.00 0.00 0.00 3.56
2949 3070 4.128643 CAAACACCCACATTCTTGCATTT 58.871 39.130 0.00 0.00 0.00 2.32
2950 3071 3.665745 ACACCCACATTCTTGCATTTC 57.334 42.857 0.00 0.00 0.00 2.17
2951 3072 2.299867 ACACCCACATTCTTGCATTTCC 59.700 45.455 0.00 0.00 0.00 3.13
2952 3073 1.901833 ACCCACATTCTTGCATTTCCC 59.098 47.619 0.00 0.00 0.00 3.97
2953 3074 2.181975 CCCACATTCTTGCATTTCCCT 58.818 47.619 0.00 0.00 0.00 4.20
2954 3075 2.568509 CCCACATTCTTGCATTTCCCTT 59.431 45.455 0.00 0.00 0.00 3.95
2955 3076 3.008266 CCCACATTCTTGCATTTCCCTTT 59.992 43.478 0.00 0.00 0.00 3.11
2956 3077 3.998341 CCACATTCTTGCATTTCCCTTTG 59.002 43.478 0.00 0.00 0.00 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.557099 CCACCCTCGGCTGCTATATA 58.443 55.000 0.00 0.00 0.00 0.86
1 2 1.194781 CCCACCCTCGGCTGCTATAT 61.195 60.000 0.00 0.00 0.00 0.86
3 4 3.164269 CCCACCCTCGGCTGCTAT 61.164 66.667 0.00 0.00 0.00 2.97
14 15 3.993584 TACACACGACGCCCACCC 61.994 66.667 0.00 0.00 0.00 4.61
15 16 2.735857 GTACACACGACGCCCACC 60.736 66.667 0.00 0.00 0.00 4.61
16 17 2.027897 TGTACACACGACGCCCAC 59.972 61.111 0.00 0.00 0.00 4.61
17 18 2.027897 GTGTACACACGACGCCCA 59.972 61.111 21.14 0.00 37.10 5.36
25 26 0.599204 CTCCCACCACGTGTACACAC 60.599 60.000 24.98 2.41 43.15 3.82
26 27 1.743391 CTCCCACCACGTGTACACA 59.257 57.895 24.98 2.65 0.00 3.72
27 28 1.005394 CCTCCCACCACGTGTACAC 60.005 63.158 16.32 16.32 0.00 2.90
28 29 1.458020 ACCTCCCACCACGTGTACA 60.458 57.895 15.65 0.00 0.00 2.90
29 30 1.005394 CACCTCCCACCACGTGTAC 60.005 63.158 15.65 0.00 0.00 2.90
30 31 2.211410 CCACCTCCCACCACGTGTA 61.211 63.158 15.65 0.00 0.00 2.90
31 32 3.556306 CCACCTCCCACCACGTGT 61.556 66.667 15.65 0.00 0.00 4.49
32 33 4.329545 CCCACCTCCCACCACGTG 62.330 72.222 9.08 9.08 0.00 4.49
33 34 4.892291 ACCCACCTCCCACCACGT 62.892 66.667 0.00 0.00 0.00 4.49
34 35 4.016706 GACCCACCTCCCACCACG 62.017 72.222 0.00 0.00 0.00 4.94
35 36 2.125766 GAAGACCCACCTCCCACCAC 62.126 65.000 0.00 0.00 0.00 4.16
36 37 1.846124 GAAGACCCACCTCCCACCA 60.846 63.158 0.00 0.00 0.00 4.17
37 38 2.955881 CGAAGACCCACCTCCCACC 61.956 68.421 0.00 0.00 0.00 4.61
38 39 2.663196 CGAAGACCCACCTCCCAC 59.337 66.667 0.00 0.00 0.00 4.61
39 40 3.319198 GCGAAGACCCACCTCCCA 61.319 66.667 0.00 0.00 0.00 4.37
40 41 4.097361 GGCGAAGACCCACCTCCC 62.097 72.222 0.00 0.00 0.00 4.30
41 42 4.452733 CGGCGAAGACCCACCTCC 62.453 72.222 0.00 0.00 0.00 4.30
64 65 3.173390 GATTCCTCACATGCGGCGC 62.173 63.158 27.44 27.44 0.00 6.53
65 66 1.368345 TTGATTCCTCACATGCGGCG 61.368 55.000 0.51 0.51 0.00 6.46
66 67 1.027357 ATTGATTCCTCACATGCGGC 58.973 50.000 0.00 0.00 0.00 6.53
67 68 1.335810 CCATTGATTCCTCACATGCGG 59.664 52.381 0.00 0.00 0.00 5.69
68 69 2.291365 TCCATTGATTCCTCACATGCG 58.709 47.619 0.00 0.00 0.00 4.73
69 70 3.067742 CCTTCCATTGATTCCTCACATGC 59.932 47.826 0.00 0.00 0.00 4.06
70 71 3.067742 GCCTTCCATTGATTCCTCACATG 59.932 47.826 0.00 0.00 0.00 3.21
71 72 3.053095 AGCCTTCCATTGATTCCTCACAT 60.053 43.478 0.00 0.00 0.00 3.21
72 73 2.309755 AGCCTTCCATTGATTCCTCACA 59.690 45.455 0.00 0.00 0.00 3.58
73 74 2.686915 CAGCCTTCCATTGATTCCTCAC 59.313 50.000 0.00 0.00 0.00 3.51
74 75 2.577563 TCAGCCTTCCATTGATTCCTCA 59.422 45.455 0.00 0.00 0.00 3.86
75 76 2.948315 GTCAGCCTTCCATTGATTCCTC 59.052 50.000 0.00 0.00 0.00 3.71
76 77 2.357569 GGTCAGCCTTCCATTGATTCCT 60.358 50.000 0.00 0.00 0.00 3.36
77 78 2.027385 GGTCAGCCTTCCATTGATTCC 58.973 52.381 0.00 0.00 0.00 3.01
78 79 1.672881 CGGTCAGCCTTCCATTGATTC 59.327 52.381 0.00 0.00 0.00 2.52
79 80 1.281867 TCGGTCAGCCTTCCATTGATT 59.718 47.619 0.00 0.00 0.00 2.57
80 81 0.911769 TCGGTCAGCCTTCCATTGAT 59.088 50.000 0.00 0.00 0.00 2.57
81 82 0.036388 GTCGGTCAGCCTTCCATTGA 60.036 55.000 0.00 0.00 0.00 2.57
82 83 1.361668 CGTCGGTCAGCCTTCCATTG 61.362 60.000 0.00 0.00 0.00 2.82
83 84 1.079127 CGTCGGTCAGCCTTCCATT 60.079 57.895 0.00 0.00 0.00 3.16
84 85 2.579201 CGTCGGTCAGCCTTCCAT 59.421 61.111 0.00 0.00 0.00 3.41
85 86 3.691342 CCGTCGGTCAGCCTTCCA 61.691 66.667 2.08 0.00 0.00 3.53
86 87 4.452733 CCCGTCGGTCAGCCTTCC 62.453 72.222 11.06 0.00 0.00 3.46
99 100 4.684134 AATGCCAAGGCTGCCCGT 62.684 61.111 16.57 0.00 42.51 5.28
100 101 4.137872 CAATGCCAAGGCTGCCCG 62.138 66.667 16.57 6.92 42.51 6.13
101 102 1.619807 AATCAATGCCAAGGCTGCCC 61.620 55.000 16.57 0.00 42.51 5.36
102 103 0.179092 GAATCAATGCCAAGGCTGCC 60.179 55.000 11.65 11.65 42.51 4.85
103 104 0.179092 GGAATCAATGCCAAGGCTGC 60.179 55.000 12.96 0.00 42.51 5.25
104 105 0.462789 GGGAATCAATGCCAAGGCTG 59.537 55.000 12.96 3.28 39.85 4.85
105 106 0.688749 GGGGAATCAATGCCAAGGCT 60.689 55.000 12.96 0.00 42.44 4.58
106 107 1.825341 GGGGAATCAATGCCAAGGC 59.175 57.895 3.61 3.61 42.44 4.35
107 108 2.019897 GCGGGGAATCAATGCCAAGG 62.020 60.000 0.00 0.00 42.44 3.61
108 109 1.438814 GCGGGGAATCAATGCCAAG 59.561 57.895 0.00 0.00 42.44 3.61
109 110 2.413963 CGCGGGGAATCAATGCCAA 61.414 57.895 0.00 0.00 42.44 4.52
110 111 2.828095 CGCGGGGAATCAATGCCA 60.828 61.111 0.00 0.00 42.44 4.92
111 112 3.595758 CCGCGGGGAATCAATGCC 61.596 66.667 20.10 0.00 39.22 4.40
127 128 1.376037 CTCACAGCCTCGGTTTCCC 60.376 63.158 0.00 0.00 0.00 3.97
128 129 1.376037 CCTCACAGCCTCGGTTTCC 60.376 63.158 0.00 0.00 0.00 3.13
129 130 0.670854 GTCCTCACAGCCTCGGTTTC 60.671 60.000 0.00 0.00 0.00 2.78
130 131 1.371558 GTCCTCACAGCCTCGGTTT 59.628 57.895 0.00 0.00 0.00 3.27
131 132 2.932234 CGTCCTCACAGCCTCGGTT 61.932 63.158 0.00 0.00 0.00 4.44
132 133 3.374402 CGTCCTCACAGCCTCGGT 61.374 66.667 0.00 0.00 0.00 4.69
133 134 3.062466 TCGTCCTCACAGCCTCGG 61.062 66.667 0.00 0.00 0.00 4.63
134 135 2.179517 GTCGTCCTCACAGCCTCG 59.820 66.667 0.00 0.00 0.00 4.63
135 136 2.179517 CGTCGTCCTCACAGCCTC 59.820 66.667 0.00 0.00 0.00 4.70
136 137 2.282251 TCGTCGTCCTCACAGCCT 60.282 61.111 0.00 0.00 0.00 4.58
137 138 2.179517 CTCGTCGTCCTCACAGCC 59.820 66.667 0.00 0.00 0.00 4.85
138 139 2.179517 CCTCGTCGTCCTCACAGC 59.820 66.667 0.00 0.00 0.00 4.40
139 140 2.179517 GCCTCGTCGTCCTCACAG 59.820 66.667 0.00 0.00 0.00 3.66
140 141 3.733960 CGCCTCGTCGTCCTCACA 61.734 66.667 0.00 0.00 0.00 3.58
158 159 4.778415 CCGAGTCAGCGACCCACG 62.778 72.222 5.29 8.48 45.66 4.94
176 177 2.740714 CGAAAGAAAGGCGGGCTCG 61.741 63.158 0.00 0.00 39.81 5.03
177 178 3.040414 GCGAAAGAAAGGCGGGCTC 62.040 63.158 3.91 0.00 0.00 4.70
178 179 3.056328 GCGAAAGAAAGGCGGGCT 61.056 61.111 0.00 0.00 0.00 5.19
179 180 4.460873 CGCGAAAGAAAGGCGGGC 62.461 66.667 0.00 0.00 45.69 6.13
183 184 0.388520 ATTTGGCGCGAAAGAAAGGC 60.389 50.000 21.93 0.00 0.00 4.35
184 185 1.985684 GAATTTGGCGCGAAAGAAAGG 59.014 47.619 21.93 0.00 0.00 3.11
185 186 1.643810 CGAATTTGGCGCGAAAGAAAG 59.356 47.619 21.93 10.12 0.00 2.62
186 187 1.264557 TCGAATTTGGCGCGAAAGAAA 59.735 42.857 21.93 6.67 0.00 2.52
187 188 0.869068 TCGAATTTGGCGCGAAAGAA 59.131 45.000 21.93 0.29 0.00 2.52
188 189 1.083489 ATCGAATTTGGCGCGAAAGA 58.917 45.000 21.93 14.39 37.60 2.52
189 190 1.578915 CAATCGAATTTGGCGCGAAAG 59.421 47.619 21.93 9.64 37.60 2.62
190 191 1.612156 CAATCGAATTTGGCGCGAAA 58.388 45.000 19.96 19.96 37.60 3.46
191 192 0.796491 GCAATCGAATTTGGCGCGAA 60.796 50.000 12.10 0.00 37.60 4.70
192 193 1.226267 GCAATCGAATTTGGCGCGA 60.226 52.632 12.10 0.00 38.51 5.87
193 194 1.196130 GAGCAATCGAATTTGGCGCG 61.196 55.000 0.00 0.00 0.00 6.86
194 195 0.867329 GGAGCAATCGAATTTGGCGC 60.867 55.000 0.00 0.00 0.00 6.53
195 196 0.248621 GGGAGCAATCGAATTTGGCG 60.249 55.000 0.00 0.00 0.00 5.69
196 197 0.248621 CGGGAGCAATCGAATTTGGC 60.249 55.000 0.00 0.00 0.00 4.52
197 198 3.924238 CGGGAGCAATCGAATTTGG 57.076 52.632 0.00 0.00 0.00 3.28
240 241 4.547367 GGATCCAGGCCGAACCCG 62.547 72.222 6.95 0.00 40.58 5.28
252 253 4.910585 ATTGGCGTCGGCGGATCC 62.911 66.667 13.05 4.22 41.24 3.36
253 254 2.374877 GAAATTGGCGTCGGCGGATC 62.375 60.000 13.05 6.17 41.24 3.36
254 255 2.437716 AAATTGGCGTCGGCGGAT 60.438 55.556 13.05 7.91 41.24 4.18
255 256 3.122323 GAAATTGGCGTCGGCGGA 61.122 61.111 13.05 5.72 41.24 5.54
256 257 2.265073 ATTGAAATTGGCGTCGGCGG 62.265 55.000 13.05 0.00 41.24 6.13
257 258 0.861450 GATTGAAATTGGCGTCGGCG 60.861 55.000 14.58 4.29 41.24 6.46
258 259 0.525455 GGATTGAAATTGGCGTCGGC 60.525 55.000 12.58 12.58 38.90 5.54
259 260 0.808125 TGGATTGAAATTGGCGTCGG 59.192 50.000 0.00 0.00 0.00 4.79
260 261 2.250188 GTTGGATTGAAATTGGCGTCG 58.750 47.619 0.00 0.00 0.00 5.12
261 262 2.231235 AGGTTGGATTGAAATTGGCGTC 59.769 45.455 0.00 0.00 0.00 5.19
262 263 2.029110 CAGGTTGGATTGAAATTGGCGT 60.029 45.455 0.00 0.00 0.00 5.68
263 264 2.230992 TCAGGTTGGATTGAAATTGGCG 59.769 45.455 0.00 0.00 0.00 5.69
264 265 3.006752 TGTCAGGTTGGATTGAAATTGGC 59.993 43.478 0.00 0.00 0.00 4.52
265 266 4.870123 TGTCAGGTTGGATTGAAATTGG 57.130 40.909 0.00 0.00 0.00 3.16
266 267 7.551035 TTTTTGTCAGGTTGGATTGAAATTG 57.449 32.000 0.00 0.00 0.00 2.32
287 288 2.179427 GCACCCCAGAAGCCTATTTTT 58.821 47.619 0.00 0.00 0.00 1.94
288 289 1.852633 GCACCCCAGAAGCCTATTTT 58.147 50.000 0.00 0.00 0.00 1.82
289 290 0.394352 CGCACCCCAGAAGCCTATTT 60.394 55.000 0.00 0.00 0.00 1.40
290 291 1.224592 CGCACCCCAGAAGCCTATT 59.775 57.895 0.00 0.00 0.00 1.73
291 292 1.689233 TCGCACCCCAGAAGCCTAT 60.689 57.895 0.00 0.00 0.00 2.57
292 293 2.284331 TCGCACCCCAGAAGCCTA 60.284 61.111 0.00 0.00 0.00 3.93
293 294 4.021925 GTCGCACCCCAGAAGCCT 62.022 66.667 0.00 0.00 0.00 4.58
294 295 4.021925 AGTCGCACCCCAGAAGCC 62.022 66.667 0.00 0.00 0.00 4.35
295 296 2.743928 CAGTCGCACCCCAGAAGC 60.744 66.667 0.00 0.00 0.00 3.86
296 297 2.046892 CCAGTCGCACCCCAGAAG 60.047 66.667 0.00 0.00 0.00 2.85
297 298 4.329545 GCCAGTCGCACCCCAGAA 62.330 66.667 0.00 0.00 37.47 3.02
303 304 4.778143 AATCCGGCCAGTCGCACC 62.778 66.667 2.24 0.00 40.31 5.01
304 305 1.862602 AAAAATCCGGCCAGTCGCAC 61.863 55.000 2.24 0.00 40.31 5.34
305 306 0.321741 TAAAAATCCGGCCAGTCGCA 60.322 50.000 2.24 0.00 40.31 5.10
306 307 0.377203 CTAAAAATCCGGCCAGTCGC 59.623 55.000 2.24 0.00 0.00 5.19
307 308 1.664151 GTCTAAAAATCCGGCCAGTCG 59.336 52.381 2.24 0.00 0.00 4.18
308 309 1.664151 CGTCTAAAAATCCGGCCAGTC 59.336 52.381 2.24 0.00 0.00 3.51
309 310 1.002773 ACGTCTAAAAATCCGGCCAGT 59.997 47.619 2.24 0.00 0.00 4.00
310 311 1.664151 GACGTCTAAAAATCCGGCCAG 59.336 52.381 8.70 0.00 0.00 4.85
311 312 1.729284 GACGTCTAAAAATCCGGCCA 58.271 50.000 8.70 0.00 0.00 5.36
312 313 0.648958 CGACGTCTAAAAATCCGGCC 59.351 55.000 14.70 0.00 0.00 6.13
313 314 0.648958 CCGACGTCTAAAAATCCGGC 59.351 55.000 14.70 0.00 0.00 6.13
314 315 0.648958 GCCGACGTCTAAAAATCCGG 59.351 55.000 14.70 8.09 38.58 5.14
315 316 0.296642 CGCCGACGTCTAAAAATCCG 59.703 55.000 14.70 0.00 33.53 4.18
316 317 0.025898 GCGCCGACGTCTAAAAATCC 59.974 55.000 14.70 0.00 42.83 3.01
317 318 0.997196 AGCGCCGACGTCTAAAAATC 59.003 50.000 14.70 0.00 42.83 2.17
318 319 2.282701 TAGCGCCGACGTCTAAAAAT 57.717 45.000 14.70 0.00 42.83 1.82
319 320 2.063156 TTAGCGCCGACGTCTAAAAA 57.937 45.000 14.70 0.00 42.83 1.94
320 321 2.063156 TTTAGCGCCGACGTCTAAAA 57.937 45.000 14.70 2.37 40.98 1.52
321 322 2.063156 TTTTAGCGCCGACGTCTAAA 57.937 45.000 14.70 13.45 41.57 1.85
322 323 2.063156 TTTTTAGCGCCGACGTCTAA 57.937 45.000 14.70 1.95 42.83 2.10
323 324 3.790744 TTTTTAGCGCCGACGTCTA 57.209 47.368 14.70 0.00 42.83 2.59
324 325 4.659480 TTTTTAGCGCCGACGTCT 57.341 50.000 14.70 0.00 42.83 4.18
339 340 1.756538 CAACAGGTCACAGGCCTTTTT 59.243 47.619 0.00 0.00 33.31 1.94
340 341 1.402787 CAACAGGTCACAGGCCTTTT 58.597 50.000 0.00 0.00 33.31 2.27
341 342 0.468029 CCAACAGGTCACAGGCCTTT 60.468 55.000 0.00 0.00 33.31 3.11
342 343 1.151450 CCAACAGGTCACAGGCCTT 59.849 57.895 0.00 0.00 33.31 4.35
343 344 2.833913 CCCAACAGGTCACAGGCCT 61.834 63.158 0.00 0.00 36.66 5.19
344 345 2.282462 CCCAACAGGTCACAGGCC 60.282 66.667 0.00 0.00 0.00 5.19
345 346 2.282462 CCCCAACAGGTCACAGGC 60.282 66.667 0.00 0.00 0.00 4.85
346 347 1.073199 GTCCCCAACAGGTCACAGG 59.927 63.158 0.00 0.00 0.00 4.00
347 348 1.301716 CGTCCCCAACAGGTCACAG 60.302 63.158 0.00 0.00 0.00 3.66
348 349 2.067605 ACGTCCCCAACAGGTCACA 61.068 57.895 0.00 0.00 0.00 3.58
349 350 1.597027 CACGTCCCCAACAGGTCAC 60.597 63.158 0.00 0.00 0.00 3.67
350 351 1.762858 TCACGTCCCCAACAGGTCA 60.763 57.895 0.00 0.00 0.00 4.02
351 352 1.301479 GTCACGTCCCCAACAGGTC 60.301 63.158 0.00 0.00 0.00 3.85
352 353 1.764854 AGTCACGTCCCCAACAGGT 60.765 57.895 0.00 0.00 0.00 4.00
353 354 1.301716 CAGTCACGTCCCCAACAGG 60.302 63.158 0.00 0.00 0.00 4.00
354 355 1.301716 CCAGTCACGTCCCCAACAG 60.302 63.158 0.00 0.00 0.00 3.16
355 356 1.754380 CTCCAGTCACGTCCCCAACA 61.754 60.000 0.00 0.00 0.00 3.33
356 357 1.004918 CTCCAGTCACGTCCCCAAC 60.005 63.158 0.00 0.00 0.00 3.77
357 358 0.544357 ATCTCCAGTCACGTCCCCAA 60.544 55.000 0.00 0.00 0.00 4.12
358 359 1.078528 ATCTCCAGTCACGTCCCCA 59.921 57.895 0.00 0.00 0.00 4.96
359 360 1.517832 CATCTCCAGTCACGTCCCC 59.482 63.158 0.00 0.00 0.00 4.81
360 361 1.153549 GCATCTCCAGTCACGTCCC 60.154 63.158 0.00 0.00 0.00 4.46
361 362 0.247736 AAGCATCTCCAGTCACGTCC 59.752 55.000 0.00 0.00 0.00 4.79
362 363 1.996191 GAAAGCATCTCCAGTCACGTC 59.004 52.381 0.00 0.00 0.00 4.34
363 364 1.344438 TGAAAGCATCTCCAGTCACGT 59.656 47.619 0.00 0.00 0.00 4.49
364 365 2.084610 TGAAAGCATCTCCAGTCACG 57.915 50.000 0.00 0.00 0.00 4.35
365 366 3.553511 CGTATGAAAGCATCTCCAGTCAC 59.446 47.826 0.00 0.00 35.94 3.67
366 367 3.195610 ACGTATGAAAGCATCTCCAGTCA 59.804 43.478 0.00 0.00 35.94 3.41
367 368 3.553511 CACGTATGAAAGCATCTCCAGTC 59.446 47.826 0.00 0.00 35.94 3.51
368 369 3.055819 ACACGTATGAAAGCATCTCCAGT 60.056 43.478 0.00 0.00 35.94 4.00
369 370 3.525537 ACACGTATGAAAGCATCTCCAG 58.474 45.455 0.00 0.00 35.94 3.86
370 371 3.610040 ACACGTATGAAAGCATCTCCA 57.390 42.857 0.00 0.00 35.94 3.86
371 372 4.946784 AAACACGTATGAAAGCATCTCC 57.053 40.909 0.00 0.00 35.94 3.71
372 373 7.061752 AGTAAAACACGTATGAAAGCATCTC 57.938 36.000 0.00 0.00 35.94 2.75
373 374 6.874134 AGAGTAAAACACGTATGAAAGCATCT 59.126 34.615 0.00 0.00 35.94 2.90
374 375 7.061752 AGAGTAAAACACGTATGAAAGCATC 57.938 36.000 0.00 0.00 35.94 3.91
375 376 6.183360 CGAGAGTAAAACACGTATGAAAGCAT 60.183 38.462 0.00 0.00 38.54 3.79
376 377 5.118050 CGAGAGTAAAACACGTATGAAAGCA 59.882 40.000 0.00 0.00 0.00 3.91
377 378 5.118203 ACGAGAGTAAAACACGTATGAAAGC 59.882 40.000 0.00 0.00 46.88 3.51
378 379 6.686130 ACGAGAGTAAAACACGTATGAAAG 57.314 37.500 0.00 0.00 46.88 2.62
395 396 1.392853 GCATCTTTCACAGCACGAGAG 59.607 52.381 0.00 0.00 0.00 3.20
396 397 1.432514 GCATCTTTCACAGCACGAGA 58.567 50.000 0.00 0.00 0.00 4.04
397 398 0.094216 CGCATCTTTCACAGCACGAG 59.906 55.000 0.00 0.00 0.00 4.18
398 399 1.291184 CCGCATCTTTCACAGCACGA 61.291 55.000 0.00 0.00 0.00 4.35
399 400 1.133253 CCGCATCTTTCACAGCACG 59.867 57.895 0.00 0.00 0.00 5.34
400 401 0.955428 TCCCGCATCTTTCACAGCAC 60.955 55.000 0.00 0.00 0.00 4.40
401 402 0.250684 TTCCCGCATCTTTCACAGCA 60.251 50.000 0.00 0.00 0.00 4.41
402 403 1.098050 ATTCCCGCATCTTTCACAGC 58.902 50.000 0.00 0.00 0.00 4.40
403 404 2.223112 CGAATTCCCGCATCTTTCACAG 60.223 50.000 0.00 0.00 0.00 3.66
404 405 1.737236 CGAATTCCCGCATCTTTCACA 59.263 47.619 0.00 0.00 0.00 3.58
439 440 4.562789 CCATGTACGTATGTCTGTCAACTG 59.437 45.833 0.00 0.00 0.00 3.16
481 484 1.610554 TACCGCAACTAGTCCTGGCC 61.611 60.000 0.00 0.00 0.00 5.36
484 487 1.816835 TCTGTACCGCAACTAGTCCTG 59.183 52.381 0.00 0.00 0.00 3.86
512 515 7.544566 TGTGTGTTAGCTAAATACTTCTACAGC 59.455 37.037 7.99 0.00 30.93 4.40
517 520 8.531982 TGATCTGTGTGTTAGCTAAATACTTCT 58.468 33.333 7.99 0.00 30.93 2.85
530 533 4.558226 ATCAAGGCTGATCTGTGTGTTA 57.442 40.909 1.27 0.00 37.82 2.41
540 543 1.281287 AGTGCACTGATCAAGGCTGAT 59.719 47.619 20.97 0.00 45.34 2.90
546 549 0.642291 CGCGTAGTGCACTGATCAAG 59.358 55.000 29.57 12.49 46.97 3.02
613 616 1.768684 TTGGCCGAGTGCTTCCTCTT 61.769 55.000 0.00 0.00 40.92 2.85
614 617 1.768684 TTTGGCCGAGTGCTTCCTCT 61.769 55.000 0.00 0.00 40.92 3.69
627 632 2.047939 GTGCATGCAGGTTTGGCC 60.048 61.111 23.41 2.25 37.58 5.36
706 712 1.022735 GGCAGCTGGATGATTCTGTG 58.977 55.000 17.12 0.00 0.00 3.66
751 758 1.566018 CTTCCGGTTCGTGTGGCTTC 61.566 60.000 0.00 0.00 0.00 3.86
770 777 3.492311 TTGCCGCCTTTGTTTCCGC 62.492 57.895 0.00 0.00 0.00 5.54
874 889 2.611224 GGGTCGGGTATTTATAGGTGCG 60.611 54.545 0.00 0.00 0.00 5.34
937 956 3.873952 GCTGATGATCTTTTAGCGGAAGT 59.126 43.478 0.00 0.00 0.00 3.01
943 962 5.213675 GCTGAATGCTGATGATCTTTTAGC 58.786 41.667 10.16 10.16 38.95 3.09
1295 1329 0.905357 GTAGAGCTGGTGGATGGTGT 59.095 55.000 0.00 0.00 0.00 4.16
2014 2096 4.389890 ACAGAGCATTTCAAACAAAGCA 57.610 36.364 0.00 0.00 0.00 3.91
2015 2097 5.521372 AGAAACAGAGCATTTCAAACAAAGC 59.479 36.000 0.78 0.00 38.32 3.51
2016 2098 7.396419 CAAGAAACAGAGCATTTCAAACAAAG 58.604 34.615 0.78 0.00 38.32 2.77
2017 2099 6.183360 GCAAGAAACAGAGCATTTCAAACAAA 60.183 34.615 0.78 0.00 38.32 2.83
2018 2100 5.291614 GCAAGAAACAGAGCATTTCAAACAA 59.708 36.000 0.78 0.00 38.32 2.83
2019 2101 4.805192 GCAAGAAACAGAGCATTTCAAACA 59.195 37.500 0.78 0.00 38.32 2.83
2020 2102 4.085415 CGCAAGAAACAGAGCATTTCAAAC 60.085 41.667 0.78 0.00 38.32 2.93
2054 2154 1.741770 GTGGTAGCAACGCCTCTGG 60.742 63.158 0.00 0.00 0.00 3.86
2141 2242 0.964358 GCCAGTGCTGCAATTCCTCT 60.964 55.000 2.77 0.00 33.53 3.69
2142 2243 1.509923 GCCAGTGCTGCAATTCCTC 59.490 57.895 2.77 0.00 33.53 3.71
2143 2244 3.690745 GCCAGTGCTGCAATTCCT 58.309 55.556 2.77 0.00 33.53 3.36
2162 2263 2.032924 GTCACAGTTGTAGTTTGTGCCC 59.967 50.000 0.00 0.00 41.41 5.36
2163 2264 2.680841 TGTCACAGTTGTAGTTTGTGCC 59.319 45.455 0.00 0.00 41.41 5.01
2164 2265 4.201910 ACATGTCACAGTTGTAGTTTGTGC 60.202 41.667 0.00 0.00 41.41 4.57
2165 2266 5.484173 ACATGTCACAGTTGTAGTTTGTG 57.516 39.130 0.00 0.00 42.65 3.33
2166 2267 6.257849 CAGTACATGTCACAGTTGTAGTTTGT 59.742 38.462 0.00 0.00 29.29 2.83
2168 2269 6.578944 TCAGTACATGTCACAGTTGTAGTTT 58.421 36.000 0.00 0.00 29.29 2.66
2169 2270 6.156748 TCAGTACATGTCACAGTTGTAGTT 57.843 37.500 0.00 0.00 29.29 2.24
2171 2272 5.048013 TCCTCAGTACATGTCACAGTTGTAG 60.048 44.000 0.00 0.00 0.00 2.74
2174 2275 4.257267 TCCTCAGTACATGTCACAGTTG 57.743 45.455 0.00 0.00 0.00 3.16
2175 2276 4.284490 ACATCCTCAGTACATGTCACAGTT 59.716 41.667 0.00 0.00 0.00 3.16
2176 2277 3.834813 ACATCCTCAGTACATGTCACAGT 59.165 43.478 0.00 0.00 0.00 3.55
2177 2278 4.082026 TCACATCCTCAGTACATGTCACAG 60.082 45.833 0.00 0.00 0.00 3.66
2178 2279 3.831911 TCACATCCTCAGTACATGTCACA 59.168 43.478 0.00 0.00 0.00 3.58
2179 2280 4.081972 ACTCACATCCTCAGTACATGTCAC 60.082 45.833 0.00 0.00 0.00 3.67
2180 2281 4.089361 ACTCACATCCTCAGTACATGTCA 58.911 43.478 0.00 0.00 0.00 3.58
2182 2283 6.381133 TGAATACTCACATCCTCAGTACATGT 59.619 38.462 2.69 2.69 0.00 3.21
2183 2284 6.809869 TGAATACTCACATCCTCAGTACATG 58.190 40.000 0.00 0.00 0.00 3.21
2184 2285 7.423844 TTGAATACTCACATCCTCAGTACAT 57.576 36.000 0.00 0.00 0.00 2.29
2185 2286 6.628175 GCTTGAATACTCACATCCTCAGTACA 60.628 42.308 0.00 0.00 0.00 2.90
2186 2287 5.751028 GCTTGAATACTCACATCCTCAGTAC 59.249 44.000 0.00 0.00 0.00 2.73
2187 2288 5.422012 TGCTTGAATACTCACATCCTCAGTA 59.578 40.000 0.00 0.00 0.00 2.74
2188 2289 4.223700 TGCTTGAATACTCACATCCTCAGT 59.776 41.667 0.00 0.00 0.00 3.41
2193 2294 6.860023 GCATTATTGCTTGAATACTCACATCC 59.140 38.462 2.33 0.00 45.77 3.51
2194 2295 7.848716 GCATTATTGCTTGAATACTCACATC 57.151 36.000 2.33 0.00 45.77 3.06
2220 2321 6.369615 TCCATGATGATAAGTTGTCATATGCG 59.630 38.462 14.35 11.54 36.49 4.73
2228 2329 7.415541 CGTTTTGGATCCATGATGATAAGTTGT 60.416 37.037 17.06 0.00 0.00 3.32
2232 2333 5.532406 ACCGTTTTGGATCCATGATGATAAG 59.468 40.000 17.06 1.41 42.00 1.73
2247 2348 1.064314 TGGGGGATATCACCGTTTTGG 60.064 52.381 17.97 0.00 41.47 3.28
2254 2355 3.953542 AGTTCTTTGGGGGATATCACC 57.046 47.619 16.36 16.36 39.21 4.02
2262 2363 3.175438 AGGATGAAAGTTCTTTGGGGG 57.825 47.619 2.38 0.00 0.00 5.40
2264 2365 5.775195 AGGTTTAGGATGAAAGTTCTTTGGG 59.225 40.000 2.38 0.00 0.00 4.12
2291 2392 9.822185 AATTAATCAAGATTACCAGGATTTTGC 57.178 29.630 0.00 0.00 33.40 3.68
2323 2425 4.469945 TCCGTTTCCAGGAGAAATATGACT 59.530 41.667 0.00 0.00 45.99 3.41
2337 2439 5.184287 GTCAAATATTTTCCCTCCGTTTCCA 59.816 40.000 0.00 0.00 0.00 3.53
2339 2441 6.510879 AGTCAAATATTTTCCCTCCGTTTC 57.489 37.500 0.00 0.00 0.00 2.78
2340 2442 5.123344 CGAGTCAAATATTTTCCCTCCGTTT 59.877 40.000 0.00 0.00 0.00 3.60
2341 2443 4.634443 CGAGTCAAATATTTTCCCTCCGTT 59.366 41.667 0.00 0.00 0.00 4.44
2342 2444 4.189231 CGAGTCAAATATTTTCCCTCCGT 58.811 43.478 0.00 0.00 0.00 4.69
2343 2445 4.189231 ACGAGTCAAATATTTTCCCTCCG 58.811 43.478 0.00 1.22 0.00 4.63
2378 2480 6.655003 TCATCGCTTTTTCCATCTTCTACTTT 59.345 34.615 0.00 0.00 0.00 2.66
2390 2492 7.810766 TGTATTGATTTTCATCGCTTTTTCC 57.189 32.000 0.00 0.00 31.08 3.13
2400 2502 8.587608 AGTGGTCATGTTTGTATTGATTTTCAT 58.412 29.630 0.00 0.00 0.00 2.57
2401 2503 7.950512 AGTGGTCATGTTTGTATTGATTTTCA 58.049 30.769 0.00 0.00 0.00 2.69
2416 2518 2.504367 GTAGTTGGCAAGTGGTCATGT 58.496 47.619 17.67 0.00 0.00 3.21
2493 2598 8.947055 ATATTTTTCTATGATGTTGGCCAAAC 57.053 30.769 22.47 15.01 39.41 2.93
2563 2669 6.148480 GTGCCAAGTATGATTAGATCCATCAC 59.852 42.308 7.23 0.00 33.42 3.06
2577 2683 6.861065 AAAATATCTACGGTGCCAAGTATG 57.139 37.500 0.00 0.00 0.00 2.39
2599 2709 8.821894 GTGCATGTTTGACCTTGTTTATAAAAA 58.178 29.630 0.00 0.00 0.00 1.94
2600 2710 7.981789 TGTGCATGTTTGACCTTGTTTATAAAA 59.018 29.630 0.00 0.00 0.00 1.52
2611 2729 1.542915 GAGCATGTGCATGTTTGACCT 59.457 47.619 12.96 1.61 45.16 3.85
2646 2764 6.836527 CCCCATTCCAAAATGTAAGGTGTATA 59.163 38.462 0.00 0.00 40.63 1.47
2662 2782 2.352561 TGGAAGTACTCCCCATTCCA 57.647 50.000 11.65 9.66 46.80 3.53
2663 2783 3.621558 CTTTGGAAGTACTCCCCATTCC 58.378 50.000 15.24 9.36 44.69 3.01
2698 2819 0.445436 GAAGATCTGCTTGTGCGGTG 59.555 55.000 0.00 0.00 45.38 4.94
2713 2834 6.591448 TGTAGTACGTTGAGATCTTACGAAGA 59.409 38.462 27.57 15.00 42.69 2.87
2731 2852 1.469767 CGGGCTTTACGGGTGTAGTAC 60.470 57.143 0.00 0.00 0.00 2.73
2733 2854 1.593265 CGGGCTTTACGGGTGTAGT 59.407 57.895 0.00 0.00 0.00 2.73
2762 2883 0.879090 GTACCTTTGCAAACTCGGGG 59.121 55.000 17.48 14.69 0.00 5.73
2789 2910 6.070897 TGATGTCATGATCGTTGTGTTTTT 57.929 33.333 0.00 0.00 0.00 1.94
2790 2911 5.687770 TGATGTCATGATCGTTGTGTTTT 57.312 34.783 0.00 0.00 0.00 2.43
2791 2912 5.687770 TTGATGTCATGATCGTTGTGTTT 57.312 34.783 0.00 0.00 0.00 2.83
2792 2913 5.687770 TTTGATGTCATGATCGTTGTGTT 57.312 34.783 0.00 0.00 0.00 3.32
2793 2914 5.687770 TTTTGATGTCATGATCGTTGTGT 57.312 34.783 0.00 0.00 0.00 3.72
2813 2934 3.251245 TGCACCGTCGATATTGTGTTTTT 59.749 39.130 0.00 0.00 0.00 1.94
2814 2935 2.809119 TGCACCGTCGATATTGTGTTTT 59.191 40.909 0.00 0.00 0.00 2.43
2815 2936 2.418692 TGCACCGTCGATATTGTGTTT 58.581 42.857 0.00 0.00 0.00 2.83
2816 2937 2.087501 TGCACCGTCGATATTGTGTT 57.912 45.000 0.00 0.00 0.00 3.32
2817 2938 2.201732 GATGCACCGTCGATATTGTGT 58.798 47.619 0.00 0.00 0.00 3.72
2818 2939 1.526887 GGATGCACCGTCGATATTGTG 59.473 52.381 0.00 0.00 0.00 3.33
2819 2940 1.138069 TGGATGCACCGTCGATATTGT 59.862 47.619 0.00 0.00 42.61 2.71
2820 2941 1.864565 TGGATGCACCGTCGATATTG 58.135 50.000 0.00 0.00 42.61 1.90
2821 2942 2.688507 GATGGATGCACCGTCGATATT 58.311 47.619 10.50 0.00 43.60 1.28
2822 2943 2.370281 GATGGATGCACCGTCGATAT 57.630 50.000 10.50 0.00 43.60 1.63
2823 2944 3.886044 GATGGATGCACCGTCGATA 57.114 52.632 10.50 0.00 43.60 2.92
2824 2945 4.758692 GATGGATGCACCGTCGAT 57.241 55.556 10.50 0.00 43.60 3.59
2828 2949 2.202932 GCTCGATGGATGCACCGT 60.203 61.111 0.00 0.00 42.61 4.83
2829 2950 2.202919 TGCTCGATGGATGCACCG 60.203 61.111 0.00 0.00 42.61 4.94
2830 2951 2.541120 GCTGCTCGATGGATGCACC 61.541 63.158 0.00 0.00 39.54 5.01
2831 2952 2.541120 GGCTGCTCGATGGATGCAC 61.541 63.158 0.00 0.00 32.91 4.57
2832 2953 2.203112 GGCTGCTCGATGGATGCA 60.203 61.111 0.00 0.00 35.30 3.96
2833 2954 3.344215 CGGCTGCTCGATGGATGC 61.344 66.667 0.00 0.00 0.00 3.91
2834 2955 3.344215 GCGGCTGCTCGATGGATG 61.344 66.667 11.21 0.00 38.39 3.51
2835 2956 4.957684 CGCGGCTGCTCGATGGAT 62.958 66.667 17.03 0.00 39.65 3.41
2849 2970 1.154016 CTATGGATAGCCGTCCGCG 60.154 63.158 0.00 0.00 44.76 6.46
2850 2971 4.891566 CTATGGATAGCCGTCCGC 57.108 61.111 0.00 0.00 41.35 5.54
2858 2979 2.036475 AGAACAGTGGCGCTATGGATAG 59.964 50.000 7.64 0.00 0.00 2.08
2859 2980 2.039418 AGAACAGTGGCGCTATGGATA 58.961 47.619 7.64 0.00 0.00 2.59
2860 2981 0.833287 AGAACAGTGGCGCTATGGAT 59.167 50.000 7.64 0.00 0.00 3.41
2861 2982 0.613260 AAGAACAGTGGCGCTATGGA 59.387 50.000 7.64 0.00 0.00 3.41
2862 2983 2.309528 TAAGAACAGTGGCGCTATGG 57.690 50.000 7.64 0.00 0.00 2.74
2863 2984 3.722147 AGATAAGAACAGTGGCGCTATG 58.278 45.455 7.64 6.42 0.00 2.23
2864 2985 4.408182 AAGATAAGAACAGTGGCGCTAT 57.592 40.909 7.64 0.00 0.00 2.97
2865 2986 3.887621 AAGATAAGAACAGTGGCGCTA 57.112 42.857 7.64 0.00 0.00 4.26
2866 2987 2.744202 CAAAGATAAGAACAGTGGCGCT 59.256 45.455 7.64 0.00 0.00 5.92
2867 2988 2.729156 GCAAAGATAAGAACAGTGGCGC 60.729 50.000 0.00 0.00 0.00 6.53
2868 2989 2.744202 AGCAAAGATAAGAACAGTGGCG 59.256 45.455 0.00 0.00 0.00 5.69
2869 2990 4.773323 AAGCAAAGATAAGAACAGTGGC 57.227 40.909 0.00 0.00 0.00 5.01
2870 2991 5.163854 CCGTAAGCAAAGATAAGAACAGTGG 60.164 44.000 0.00 0.00 0.00 4.00
2871 2992 5.637810 TCCGTAAGCAAAGATAAGAACAGTG 59.362 40.000 0.00 0.00 0.00 3.66
2872 2993 5.790593 TCCGTAAGCAAAGATAAGAACAGT 58.209 37.500 0.00 0.00 0.00 3.55
2873 2994 6.238211 CCATCCGTAAGCAAAGATAAGAACAG 60.238 42.308 0.00 0.00 0.00 3.16
2874 2995 5.584649 CCATCCGTAAGCAAAGATAAGAACA 59.415 40.000 0.00 0.00 0.00 3.18
2875 2996 5.585047 ACCATCCGTAAGCAAAGATAAGAAC 59.415 40.000 0.00 0.00 0.00 3.01
2876 2997 5.741011 ACCATCCGTAAGCAAAGATAAGAA 58.259 37.500 0.00 0.00 0.00 2.52
2877 2998 5.353394 ACCATCCGTAAGCAAAGATAAGA 57.647 39.130 0.00 0.00 0.00 2.10
2878 2999 6.316390 AGAAACCATCCGTAAGCAAAGATAAG 59.684 38.462 0.00 0.00 0.00 1.73
2879 3000 6.177610 AGAAACCATCCGTAAGCAAAGATAA 58.822 36.000 0.00 0.00 0.00 1.75
2880 3001 5.741011 AGAAACCATCCGTAAGCAAAGATA 58.259 37.500 0.00 0.00 0.00 1.98
2881 3002 4.589908 AGAAACCATCCGTAAGCAAAGAT 58.410 39.130 0.00 0.00 0.00 2.40
2882 3003 4.000988 GAGAAACCATCCGTAAGCAAAGA 58.999 43.478 0.00 0.00 0.00 2.52
2883 3004 4.003648 AGAGAAACCATCCGTAAGCAAAG 58.996 43.478 0.00 0.00 0.00 2.77
2884 3005 4.015872 AGAGAAACCATCCGTAAGCAAA 57.984 40.909 0.00 0.00 0.00 3.68
2885 3006 3.695830 AGAGAAACCATCCGTAAGCAA 57.304 42.857 0.00 0.00 0.00 3.91
2886 3007 3.695830 AAGAGAAACCATCCGTAAGCA 57.304 42.857 0.00 0.00 0.00 3.91
2887 3008 4.000988 TGAAAGAGAAACCATCCGTAAGC 58.999 43.478 0.00 0.00 0.00 3.09
2888 3009 5.874810 TCATGAAAGAGAAACCATCCGTAAG 59.125 40.000 0.00 0.00 0.00 2.34
2889 3010 5.800296 TCATGAAAGAGAAACCATCCGTAA 58.200 37.500 0.00 0.00 0.00 3.18
2890 3011 5.414789 TCATGAAAGAGAAACCATCCGTA 57.585 39.130 0.00 0.00 0.00 4.02
2891 3012 4.286297 TCATGAAAGAGAAACCATCCGT 57.714 40.909 0.00 0.00 0.00 4.69
2892 3013 4.637534 ACATCATGAAAGAGAAACCATCCG 59.362 41.667 0.00 0.00 0.00 4.18
2893 3014 5.220739 CGACATCATGAAAGAGAAACCATCC 60.221 44.000 0.00 0.00 0.00 3.51
2894 3015 5.220739 CCGACATCATGAAAGAGAAACCATC 60.221 44.000 0.00 0.00 0.00 3.51
2895 3016 4.637534 CCGACATCATGAAAGAGAAACCAT 59.362 41.667 0.00 0.00 0.00 3.55
2896 3017 4.002982 CCGACATCATGAAAGAGAAACCA 58.997 43.478 0.00 0.00 0.00 3.67
2897 3018 3.375299 CCCGACATCATGAAAGAGAAACC 59.625 47.826 0.00 0.00 0.00 3.27
2898 3019 4.003648 ACCCGACATCATGAAAGAGAAAC 58.996 43.478 0.00 0.00 0.00 2.78
2899 3020 4.253685 GACCCGACATCATGAAAGAGAAA 58.746 43.478 0.00 0.00 0.00 2.52
2900 3021 3.676049 CGACCCGACATCATGAAAGAGAA 60.676 47.826 0.00 0.00 0.00 2.87
2901 3022 2.159240 CGACCCGACATCATGAAAGAGA 60.159 50.000 0.00 0.00 0.00 3.10
2902 3023 2.159240 TCGACCCGACATCATGAAAGAG 60.159 50.000 0.00 0.00 0.00 2.85
2903 3024 1.822371 TCGACCCGACATCATGAAAGA 59.178 47.619 0.00 0.00 0.00 2.52
2904 3025 2.293677 TCGACCCGACATCATGAAAG 57.706 50.000 0.00 0.00 0.00 2.62
2905 3026 2.232696 TCTTCGACCCGACATCATGAAA 59.767 45.455 0.00 0.00 34.89 2.69
2906 3027 1.822371 TCTTCGACCCGACATCATGAA 59.178 47.619 0.00 0.00 34.89 2.57
2907 3028 1.134367 GTCTTCGACCCGACATCATGA 59.866 52.381 0.00 0.00 34.89 3.07
2908 3029 1.135112 TGTCTTCGACCCGACATCATG 60.135 52.381 7.15 0.00 35.40 3.07
2909 3030 1.182667 TGTCTTCGACCCGACATCAT 58.817 50.000 7.15 0.00 35.40 2.45
2910 3031 0.963225 TTGTCTTCGACCCGACATCA 59.037 50.000 10.93 0.00 39.63 3.07
2911 3032 1.725164 GTTTGTCTTCGACCCGACATC 59.275 52.381 10.93 5.80 39.63 3.06
2912 3033 1.069513 TGTTTGTCTTCGACCCGACAT 59.930 47.619 10.93 0.00 39.63 3.06
2913 3034 0.460722 TGTTTGTCTTCGACCCGACA 59.539 50.000 7.15 7.15 38.30 4.35
2914 3035 0.857287 GTGTTTGTCTTCGACCCGAC 59.143 55.000 0.00 0.00 34.89 4.79
2915 3036 0.249573 GGTGTTTGTCTTCGACCCGA 60.250 55.000 0.00 0.00 0.00 5.14
2916 3037 1.226030 GGGTGTTTGTCTTCGACCCG 61.226 60.000 0.00 0.00 37.12 5.28
2917 3038 0.179040 TGGGTGTTTGTCTTCGACCC 60.179 55.000 0.00 0.00 45.77 4.46
2918 3039 0.942252 GTGGGTGTTTGTCTTCGACC 59.058 55.000 0.00 0.00 0.00 4.79
2919 3040 1.658994 TGTGGGTGTTTGTCTTCGAC 58.341 50.000 0.00 0.00 0.00 4.20
2920 3041 2.631160 ATGTGGGTGTTTGTCTTCGA 57.369 45.000 0.00 0.00 0.00 3.71
2921 3042 2.878406 AGAATGTGGGTGTTTGTCTTCG 59.122 45.455 0.00 0.00 0.00 3.79
2922 3043 4.610945 CAAGAATGTGGGTGTTTGTCTTC 58.389 43.478 0.00 0.00 0.00 2.87
2923 3044 3.181476 GCAAGAATGTGGGTGTTTGTCTT 60.181 43.478 0.00 0.00 0.00 3.01
2924 3045 2.362077 GCAAGAATGTGGGTGTTTGTCT 59.638 45.455 0.00 0.00 0.00 3.41
2925 3046 2.100584 TGCAAGAATGTGGGTGTTTGTC 59.899 45.455 0.00 0.00 0.00 3.18
2926 3047 2.106566 TGCAAGAATGTGGGTGTTTGT 58.893 42.857 0.00 0.00 0.00 2.83
2927 3048 2.886862 TGCAAGAATGTGGGTGTTTG 57.113 45.000 0.00 0.00 0.00 2.93
2928 3049 4.379652 GAAATGCAAGAATGTGGGTGTTT 58.620 39.130 0.00 0.00 0.00 2.83
2929 3050 3.244181 GGAAATGCAAGAATGTGGGTGTT 60.244 43.478 0.00 0.00 0.00 3.32
2930 3051 2.299867 GGAAATGCAAGAATGTGGGTGT 59.700 45.455 0.00 0.00 0.00 4.16
2931 3052 2.354003 GGGAAATGCAAGAATGTGGGTG 60.354 50.000 0.00 0.00 0.00 4.61
2932 3053 1.901833 GGGAAATGCAAGAATGTGGGT 59.098 47.619 0.00 0.00 0.00 4.51
2933 3054 2.181975 AGGGAAATGCAAGAATGTGGG 58.818 47.619 0.00 0.00 0.00 4.61
2934 3055 3.967332 AAGGGAAATGCAAGAATGTGG 57.033 42.857 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.