Multiple sequence alignment - TraesCS6B01G346000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G346000 chr6B 100.000 3209 0 0 1 3209 609856241 609853033 0.000000e+00 5927.0
1 TraesCS6B01G346000 chr6B 89.103 312 16 6 1 309 237975340 237975636 3.910000e-99 372.0
2 TraesCS6B01G346000 chr6B 85.965 114 15 1 267 379 18216919 18216806 1.560000e-23 121.0
3 TraesCS6B01G346000 chr6B 82.609 92 16 0 1414 1505 523881029 523880938 7.380000e-12 82.4
4 TraesCS6B01G346000 chr6D 91.262 2449 130 37 426 2813 405651830 405649405 0.000000e+00 3260.0
5 TraesCS6B01G346000 chr6A 92.582 2103 106 23 421 2484 552209789 552207698 0.000000e+00 2974.0
6 TraesCS6B01G346000 chr6A 76.596 141 29 3 1414 1552 487770857 487770719 1.230000e-09 75.0
7 TraesCS6B01G346000 chr7B 91.176 374 27 2 1 371 713670902 713670532 1.330000e-138 503.0
8 TraesCS6B01G346000 chr7B 78.626 131 26 2 1414 1543 199262421 199262550 5.700000e-13 86.1
9 TraesCS6B01G346000 chr7B 100.000 29 0 0 2566 2594 586064267 586064295 2.000000e-03 54.7
10 TraesCS6B01G346000 chr1B 96.444 225 4 2 1 221 678696330 678696106 5.060000e-98 368.0
11 TraesCS6B01G346000 chr1B 100.000 89 0 0 283 371 678695658 678695570 7.120000e-37 165.0
12 TraesCS6B01G346000 chr1B 82.258 124 18 4 251 371 312916594 312916472 1.570000e-18 104.0
13 TraesCS6B01G346000 chr4B 95.122 205 7 1 1 202 366869375 366869171 1.440000e-83 320.0
14 TraesCS6B01G346000 chr4B 82.620 374 43 7 1 371 429622958 429622604 8.640000e-81 311.0
15 TraesCS6B01G346000 chr4B 95.918 98 4 0 277 374 366868908 366868811 3.310000e-35 159.0
16 TraesCS6B01G346000 chr4B 82.500 120 21 0 252 371 472138069 472138188 4.380000e-19 106.0
17 TraesCS6B01G346000 chr3A 90.361 83 6 2 277 358 383352465 383352546 1.220000e-19 108.0
18 TraesCS6B01G346000 chr7A 79.699 133 25 2 1414 1545 239545116 239545247 9.480000e-16 95.3
19 TraesCS6B01G346000 chr7A 100.000 28 0 0 2568 2595 22081030 22081003 6.000000e-03 52.8
20 TraesCS6B01G346000 chr7D 79.389 131 25 2 1414 1543 227544315 227544444 1.230000e-14 91.6
21 TraesCS6B01G346000 chr3B 91.803 61 5 0 308 368 666926723 666926783 5.700000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G346000 chr6B 609853033 609856241 3208 True 5927.0 5927 100.000 1 3209 1 chr6B.!!$R3 3208
1 TraesCS6B01G346000 chr6D 405649405 405651830 2425 True 3260.0 3260 91.262 426 2813 1 chr6D.!!$R1 2387
2 TraesCS6B01G346000 chr6A 552207698 552209789 2091 True 2974.0 2974 92.582 421 2484 1 chr6A.!!$R2 2063
3 TraesCS6B01G346000 chr1B 678695570 678696330 760 True 266.5 368 98.222 1 371 2 chr1B.!!$R2 370
4 TraesCS6B01G346000 chr4B 366868811 366869375 564 True 239.5 320 95.520 1 374 2 chr4B.!!$R2 373

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
265 269 0.042794 GTTGCTTTGCTTGCGCTTTG 60.043 50.0 9.73 0.0 36.97 2.77 F
1635 2056 0.613260 ACAGCACCTCCAGCGAAATA 59.387 50.0 0.00 0.0 37.01 1.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2172 2596 0.320374 TGTCCTTGTCCACATCGACC 59.680 55.0 0.0 0.0 31.35 4.79 R
3021 3490 0.038166 AGGTTGCATTGTCGGTGGAT 59.962 50.0 0.0 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 5.178996 CACTCTATGGCATGCTAGAAATGAC 59.821 44.000 18.92 7.26 33.33 3.06
185 189 7.465513 GCCAGAAAATTACCATCTAAGTACACG 60.466 40.741 0.00 0.00 0.00 4.49
250 254 3.715628 TTCTTTTTGGCTCTCTGTTGC 57.284 42.857 0.00 0.00 0.00 4.17
251 255 2.936202 TCTTTTTGGCTCTCTGTTGCT 58.064 42.857 0.00 0.00 0.00 3.91
252 256 3.290710 TCTTTTTGGCTCTCTGTTGCTT 58.709 40.909 0.00 0.00 0.00 3.91
253 257 3.701040 TCTTTTTGGCTCTCTGTTGCTTT 59.299 39.130 0.00 0.00 0.00 3.51
254 258 3.441496 TTTTGGCTCTCTGTTGCTTTG 57.559 42.857 0.00 0.00 0.00 2.77
255 259 0.670162 TTGGCTCTCTGTTGCTTTGC 59.330 50.000 0.00 0.00 0.00 3.68
256 260 0.179009 TGGCTCTCTGTTGCTTTGCT 60.179 50.000 0.00 0.00 0.00 3.91
257 261 0.957362 GGCTCTCTGTTGCTTTGCTT 59.043 50.000 0.00 0.00 0.00 3.91
258 262 1.335689 GGCTCTCTGTTGCTTTGCTTG 60.336 52.381 0.00 0.00 0.00 4.01
259 263 1.929482 GCTCTCTGTTGCTTTGCTTGC 60.929 52.381 0.00 0.00 0.00 4.01
260 264 0.308684 TCTCTGTTGCTTTGCTTGCG 59.691 50.000 0.00 0.00 0.00 4.85
261 265 1.273455 CTCTGTTGCTTTGCTTGCGC 61.273 55.000 0.00 0.00 0.00 6.09
262 266 1.299620 CTGTTGCTTTGCTTGCGCT 60.300 52.632 9.73 0.00 36.97 5.92
263 267 0.872881 CTGTTGCTTTGCTTGCGCTT 60.873 50.000 9.73 0.00 36.97 4.68
264 268 0.459934 TGTTGCTTTGCTTGCGCTTT 60.460 45.000 9.73 0.00 36.97 3.51
265 269 0.042794 GTTGCTTTGCTTGCGCTTTG 60.043 50.000 9.73 0.00 36.97 2.77
266 270 1.764180 TTGCTTTGCTTGCGCTTTGC 61.764 50.000 9.73 10.93 46.70 3.68
275 279 2.256461 GCGCTTTGCACCTTCCTG 59.744 61.111 0.00 0.00 45.45 3.86
458 849 2.834549 CACTTGAGATCTACCCACACCT 59.165 50.000 0.00 0.00 0.00 4.00
519 910 4.021916 ACTACGTAGGGAACAGCTGTTAT 58.978 43.478 31.20 21.35 38.56 1.89
520 911 5.195940 ACTACGTAGGGAACAGCTGTTATA 58.804 41.667 31.20 20.37 38.56 0.98
544 940 5.412640 ACCGTTGATGTGATACGATACAAA 58.587 37.500 0.00 0.00 37.47 2.83
549 945 7.219344 CGTTGATGTGATACGATACAAACACTA 59.781 37.037 0.00 0.00 37.47 2.74
580 976 1.960689 TCGACCACTTGATCTGACACA 59.039 47.619 0.00 0.00 0.00 3.72
586 982 4.461431 ACCACTTGATCTGACACATACGTA 59.539 41.667 0.00 0.00 0.00 3.57
632 1028 2.176273 CCATACTGCCAGCGTGCTC 61.176 63.158 0.00 0.00 0.00 4.26
641 1037 1.142748 CAGCGTGCTCCTCCTAAGG 59.857 63.158 0.00 0.00 44.89 2.69
680 1076 3.369147 CAGTCAAAGTGCCAGATAACTCG 59.631 47.826 0.00 0.00 0.00 4.18
868 1270 2.023888 TCCTCTGCCTCTATATAGCCCC 60.024 54.545 4.75 0.00 0.00 5.80
872 1274 1.899814 TGCCTCTATATAGCCCCAACG 59.100 52.381 4.75 0.00 0.00 4.10
874 1276 1.899814 CCTCTATATAGCCCCAACGCA 59.100 52.381 4.75 0.00 0.00 5.24
966 1376 1.403972 GAGCTAACAACGACGAGCCG 61.404 60.000 0.00 0.00 35.45 5.52
1135 1556 1.810853 CGCATCAGCACGACCATGA 60.811 57.895 0.00 0.00 42.27 3.07
1182 1603 2.354203 GGTGTTCTTCTTCATCCTCGCT 60.354 50.000 0.00 0.00 0.00 4.93
1226 1647 3.589881 CGGCTACTCGTACCCCCG 61.590 72.222 0.00 0.00 0.00 5.73
1635 2056 0.613260 ACAGCACCTCCAGCGAAATA 59.387 50.000 0.00 0.00 37.01 1.40
1644 2065 1.705337 CCAGCGAAATAGCCGTGGTG 61.705 60.000 0.00 0.00 38.01 4.17
1918 2342 3.381983 ACGTGCGCAGGGAGATGA 61.382 61.111 31.09 0.00 0.00 2.92
2131 2555 1.497991 TTTCGTCGAAGGTTCTGCTG 58.502 50.000 7.86 0.00 0.00 4.41
2181 2605 1.807165 CTCTGTGGCGGTCGATGTG 60.807 63.158 0.00 0.00 0.00 3.21
2189 2613 1.589630 CGGTCGATGTGGACAAGGA 59.410 57.895 0.00 0.00 38.70 3.36
2190 2614 0.736325 CGGTCGATGTGGACAAGGAC 60.736 60.000 0.00 5.46 38.70 3.85
2191 2615 0.320374 GGTCGATGTGGACAAGGACA 59.680 55.000 12.74 0.00 38.70 4.02
2192 2616 1.270625 GGTCGATGTGGACAAGGACAA 60.271 52.381 12.74 0.00 38.70 3.18
2193 2617 2.069273 GTCGATGTGGACAAGGACAAG 58.931 52.381 0.00 0.00 36.91 3.16
2194 2618 1.001974 TCGATGTGGACAAGGACAAGG 59.998 52.381 0.00 0.00 0.00 3.61
2230 2654 5.111293 AGGTTCGAACGTAGAAAAGAAACA 58.889 37.500 21.10 0.00 0.00 2.83
2332 2756 2.067091 AATCGCCGCATGCAGAATGG 62.067 55.000 19.57 11.39 41.33 3.16
2339 2763 1.674441 CGCATGCAGAATGGTCAAGAT 59.326 47.619 19.57 0.00 36.71 2.40
2359 2783 2.270205 CCTGTTGAGGCGCCTGAT 59.730 61.111 38.41 11.11 30.52 2.90
2504 2966 1.075450 AGGGACCGGATACACCCTC 60.075 63.158 9.46 0.00 46.77 4.30
2506 2968 0.979187 GGGACCGGATACACCCTCAA 60.979 60.000 9.46 0.00 39.84 3.02
2512 2974 1.484653 CGGATACACCCTCAATCCACA 59.515 52.381 0.00 0.00 39.36 4.17
2547 3009 8.843885 AAGTACATACTAGGGTTTTGAACTTC 57.156 34.615 0.00 0.00 34.99 3.01
2552 3015 8.630037 ACATACTAGGGTTTTGAACTTCTTTTG 58.370 33.333 0.00 0.00 0.00 2.44
2560 3023 4.974368 TTGAACTTCTTTTGCGAGGAAA 57.026 36.364 0.00 0.00 0.00 3.13
2570 3033 3.495434 TTGCGAGGAAAAGGGAGTTTA 57.505 42.857 0.00 0.00 0.00 2.01
2571 3034 3.713826 TGCGAGGAAAAGGGAGTTTAT 57.286 42.857 0.00 0.00 0.00 1.40
2573 3036 4.007659 TGCGAGGAAAAGGGAGTTTATTC 58.992 43.478 0.00 0.00 0.00 1.75
2575 3038 4.585879 CGAGGAAAAGGGAGTTTATTCCA 58.414 43.478 5.72 0.00 41.58 3.53
2576 3039 5.193679 CGAGGAAAAGGGAGTTTATTCCAT 58.806 41.667 5.72 0.00 41.58 3.41
2577 3040 6.354130 CGAGGAAAAGGGAGTTTATTCCATA 58.646 40.000 5.72 0.00 41.58 2.74
2578 3041 6.826741 CGAGGAAAAGGGAGTTTATTCCATAA 59.173 38.462 5.72 0.00 41.58 1.90
2579 3042 7.502561 CGAGGAAAAGGGAGTTTATTCCATAAT 59.497 37.037 5.72 0.00 41.58 1.28
2580 3043 8.539117 AGGAAAAGGGAGTTTATTCCATAATG 57.461 34.615 5.72 0.00 41.58 1.90
2581 3044 8.343787 AGGAAAAGGGAGTTTATTCCATAATGA 58.656 33.333 5.72 0.00 41.58 2.57
2582 3045 9.147732 GGAAAAGGGAGTTTATTCCATAATGAT 57.852 33.333 0.00 0.00 39.45 2.45
2622 3085 8.103948 GTAACGGTAGTTGCTCTATATAAGGA 57.896 38.462 0.00 0.00 41.35 3.36
2643 3106 1.172812 GGTCCTTCACCAAGCCACAC 61.173 60.000 0.00 0.00 45.98 3.82
2644 3107 0.465460 GTCCTTCACCAAGCCACACA 60.465 55.000 0.00 0.00 0.00 3.72
2648 3111 0.472044 TTCACCAAGCCACACAGCTA 59.528 50.000 0.00 0.00 44.11 3.32
2649 3112 0.692476 TCACCAAGCCACACAGCTAT 59.308 50.000 0.00 0.00 44.11 2.97
2650 3113 0.806868 CACCAAGCCACACAGCTATG 59.193 55.000 0.00 0.00 44.11 2.23
2663 3131 1.134521 CAGCTATGGCCCGTTCACTAA 60.135 52.381 0.00 0.00 39.73 2.24
2664 3132 1.139058 AGCTATGGCCCGTTCACTAAG 59.861 52.381 0.00 0.00 39.73 2.18
2686 3154 9.915629 CTAAGACTATATAAAGCCAAACGATCT 57.084 33.333 0.00 0.00 0.00 2.75
2692 3160 2.770164 AAGCCAAACGATCTGCTACT 57.230 45.000 0.00 0.00 32.82 2.57
2695 3163 1.929836 GCCAAACGATCTGCTACTCTG 59.070 52.381 0.00 0.00 0.00 3.35
2698 3166 4.744570 CCAAACGATCTGCTACTCTGTTA 58.255 43.478 0.00 0.00 0.00 2.41
2704 3172 6.037098 ACGATCTGCTACTCTGTTATGTTTC 58.963 40.000 0.00 0.00 0.00 2.78
2721 3189 8.621286 GTTATGTTTCCTCAAAAGTTTCTGAGA 58.379 33.333 20.27 10.10 41.38 3.27
2737 3205 7.715686 AGTTTCTGAGAAATAAACTTCCGAACT 59.284 33.333 11.20 0.00 39.74 3.01
2750 3218 0.999406 CCGAACTAGCATGTGTTCCG 59.001 55.000 16.66 13.11 39.30 4.30
2765 3233 2.224281 TGTTCCGTGATCTCTGCAACTT 60.224 45.455 0.00 0.00 0.00 2.66
2768 3236 3.089284 TCCGTGATCTCTGCAACTTAGA 58.911 45.455 0.00 0.00 0.00 2.10
2769 3237 3.119459 TCCGTGATCTCTGCAACTTAGAC 60.119 47.826 0.00 0.00 0.00 2.59
2801 3270 4.466370 CCGACCTGGAAGCCTATTATCATA 59.534 45.833 0.00 0.00 42.00 2.15
2813 3282 9.851686 AAGCCTATTATCATAAAGACATGACAA 57.148 29.630 0.00 0.00 37.74 3.18
2814 3283 9.499479 AGCCTATTATCATAAAGACATGACAAG 57.501 33.333 0.00 0.00 37.74 3.16
2815 3284 8.725148 GCCTATTATCATAAAGACATGACAAGG 58.275 37.037 0.00 0.00 37.74 3.61
2816 3285 8.725148 CCTATTATCATAAAGACATGACAAGGC 58.275 37.037 0.00 0.00 37.74 4.35
2817 3286 9.499479 CTATTATCATAAAGACATGACAAGGCT 57.501 33.333 0.00 0.00 37.74 4.58
2818 3287 8.757982 ATTATCATAAAGACATGACAAGGCTT 57.242 30.769 0.00 0.00 37.74 4.35
2819 3288 8.579850 TTATCATAAAGACATGACAAGGCTTT 57.420 30.769 15.37 15.37 37.74 3.51
2820 3289 9.679661 TTATCATAAAGACATGACAAGGCTTTA 57.320 29.630 18.38 18.38 37.74 1.85
2821 3290 7.615582 TCATAAAGACATGACAAGGCTTTAG 57.384 36.000 20.15 13.62 35.34 1.85
2822 3291 7.394016 TCATAAAGACATGACAAGGCTTTAGA 58.606 34.615 20.15 15.16 35.34 2.10
2823 3292 7.550551 TCATAAAGACATGACAAGGCTTTAGAG 59.449 37.037 20.15 15.73 35.34 2.43
2824 3293 4.899352 AGACATGACAAGGCTTTAGAGT 57.101 40.909 0.00 0.00 0.00 3.24
2825 3294 6.360370 AAGACATGACAAGGCTTTAGAGTA 57.640 37.500 0.00 0.00 0.00 2.59
2826 3295 6.360370 AGACATGACAAGGCTTTAGAGTAA 57.640 37.500 0.00 0.00 0.00 2.24
2827 3296 6.951971 AGACATGACAAGGCTTTAGAGTAAT 58.048 36.000 0.00 0.00 0.00 1.89
2828 3297 7.044798 AGACATGACAAGGCTTTAGAGTAATC 58.955 38.462 0.00 0.00 0.00 1.75
2829 3298 6.951971 ACATGACAAGGCTTTAGAGTAATCT 58.048 36.000 0.00 0.00 0.00 2.40
2830 3299 6.820656 ACATGACAAGGCTTTAGAGTAATCTG 59.179 38.462 2.23 0.00 0.00 2.90
2831 3300 6.605471 TGACAAGGCTTTAGAGTAATCTGA 57.395 37.500 2.23 0.00 0.00 3.27
2832 3301 7.187824 TGACAAGGCTTTAGAGTAATCTGAT 57.812 36.000 2.23 0.00 0.00 2.90
2833 3302 7.624549 TGACAAGGCTTTAGAGTAATCTGATT 58.375 34.615 8.14 8.14 0.00 2.57
2834 3303 7.550551 TGACAAGGCTTTAGAGTAATCTGATTG 59.449 37.037 13.01 0.00 0.00 2.67
2835 3304 6.825721 ACAAGGCTTTAGAGTAATCTGATTGG 59.174 38.462 13.01 0.00 0.00 3.16
2836 3305 6.814954 AGGCTTTAGAGTAATCTGATTGGA 57.185 37.500 13.01 0.00 0.00 3.53
2837 3306 6.587273 AGGCTTTAGAGTAATCTGATTGGAC 58.413 40.000 13.01 4.34 0.00 4.02
2838 3307 6.156949 AGGCTTTAGAGTAATCTGATTGGACA 59.843 38.462 13.01 0.00 0.00 4.02
2839 3308 6.823689 GGCTTTAGAGTAATCTGATTGGACAA 59.176 38.462 13.01 0.00 0.00 3.18
2840 3309 7.500559 GGCTTTAGAGTAATCTGATTGGACAAT 59.499 37.037 13.01 0.00 0.00 2.71
2841 3310 8.341173 GCTTTAGAGTAATCTGATTGGACAATG 58.659 37.037 13.01 4.79 0.00 2.82
2842 3311 9.605275 CTTTAGAGTAATCTGATTGGACAATGA 57.395 33.333 13.01 0.00 0.00 2.57
2846 3315 8.932610 AGAGTAATCTGATTGGACAATGATACT 58.067 33.333 13.01 4.27 0.00 2.12
2847 3316 9.202273 GAGTAATCTGATTGGACAATGATACTC 57.798 37.037 13.01 9.35 0.00 2.59
2848 3317 8.153550 AGTAATCTGATTGGACAATGATACTCC 58.846 37.037 13.01 0.00 0.00 3.85
2849 3318 5.296151 TCTGATTGGACAATGATACTCCC 57.704 43.478 1.69 0.00 0.00 4.30
2850 3319 4.103153 TCTGATTGGACAATGATACTCCCC 59.897 45.833 1.69 0.00 0.00 4.81
2851 3320 4.047166 TGATTGGACAATGATACTCCCCT 58.953 43.478 1.69 0.00 0.00 4.79
2852 3321 4.478317 TGATTGGACAATGATACTCCCCTT 59.522 41.667 1.69 0.00 0.00 3.95
2853 3322 4.503714 TTGGACAATGATACTCCCCTTC 57.496 45.455 0.00 0.00 0.00 3.46
2854 3323 2.434336 TGGACAATGATACTCCCCTTCG 59.566 50.000 0.00 0.00 0.00 3.79
2855 3324 2.698797 GGACAATGATACTCCCCTTCGA 59.301 50.000 0.00 0.00 0.00 3.71
2856 3325 3.243907 GGACAATGATACTCCCCTTCGAG 60.244 52.174 0.00 0.00 35.88 4.04
2857 3326 3.375699 ACAATGATACTCCCCTTCGAGT 58.624 45.455 0.00 0.00 45.15 4.18
2858 3327 3.133003 ACAATGATACTCCCCTTCGAGTG 59.867 47.826 1.55 0.00 43.04 3.51
2859 3328 2.526888 TGATACTCCCCTTCGAGTGT 57.473 50.000 1.55 0.00 43.04 3.55
2860 3329 2.816411 TGATACTCCCCTTCGAGTGTT 58.184 47.619 1.55 0.00 43.04 3.32
2861 3330 2.496070 TGATACTCCCCTTCGAGTGTTG 59.504 50.000 1.55 0.00 43.04 3.33
2862 3331 1.263356 TACTCCCCTTCGAGTGTTGG 58.737 55.000 1.55 0.00 43.04 3.77
2863 3332 0.471211 ACTCCCCTTCGAGTGTTGGA 60.471 55.000 0.00 0.00 41.60 3.53
2864 3333 0.905357 CTCCCCTTCGAGTGTTGGAT 59.095 55.000 0.00 0.00 0.00 3.41
2865 3334 1.279271 CTCCCCTTCGAGTGTTGGATT 59.721 52.381 0.00 0.00 0.00 3.01
2866 3335 1.278127 TCCCCTTCGAGTGTTGGATTC 59.722 52.381 0.00 0.00 0.00 2.52
2867 3336 1.279271 CCCCTTCGAGTGTTGGATTCT 59.721 52.381 0.00 0.00 0.00 2.40
2868 3337 2.622436 CCCTTCGAGTGTTGGATTCTC 58.378 52.381 0.00 0.00 0.00 2.87
2869 3338 2.028112 CCCTTCGAGTGTTGGATTCTCA 60.028 50.000 0.00 0.00 0.00 3.27
2870 3339 3.557054 CCCTTCGAGTGTTGGATTCTCAA 60.557 47.826 0.00 0.00 0.00 3.02
2871 3340 3.681897 CCTTCGAGTGTTGGATTCTCAAG 59.318 47.826 0.00 0.00 0.00 3.02
2872 3341 3.319137 TCGAGTGTTGGATTCTCAAGG 57.681 47.619 0.00 0.00 0.00 3.61
2873 3342 1.734465 CGAGTGTTGGATTCTCAAGGC 59.266 52.381 0.00 0.00 0.00 4.35
2874 3343 2.087646 GAGTGTTGGATTCTCAAGGCC 58.912 52.381 0.00 0.00 0.00 5.19
2875 3344 1.425066 AGTGTTGGATTCTCAAGGCCA 59.575 47.619 5.01 0.00 0.00 5.36
2876 3345 2.042162 AGTGTTGGATTCTCAAGGCCAT 59.958 45.455 5.01 0.00 0.00 4.40
2877 3346 2.424956 GTGTTGGATTCTCAAGGCCATC 59.575 50.000 5.01 0.00 0.00 3.51
2878 3347 2.027385 GTTGGATTCTCAAGGCCATCC 58.973 52.381 5.01 8.17 36.48 3.51
2879 3348 0.552848 TGGATTCTCAAGGCCATCCC 59.447 55.000 13.51 0.62 35.23 3.85
2889 3358 2.736670 AGGCCATCCCTTGTATCAAC 57.263 50.000 5.01 0.00 43.06 3.18
2890 3359 1.134098 AGGCCATCCCTTGTATCAACG 60.134 52.381 5.01 0.00 43.06 4.10
2891 3360 0.663153 GCCATCCCTTGTATCAACGC 59.337 55.000 0.00 0.00 0.00 4.84
2892 3361 2.016604 GCCATCCCTTGTATCAACGCA 61.017 52.381 0.00 0.00 0.00 5.24
2893 3362 2.575532 CCATCCCTTGTATCAACGCAT 58.424 47.619 0.00 0.00 0.00 4.73
2894 3363 2.291465 CCATCCCTTGTATCAACGCATG 59.709 50.000 0.00 0.00 0.00 4.06
2895 3364 2.779755 TCCCTTGTATCAACGCATGT 57.220 45.000 0.00 0.00 0.00 3.21
2896 3365 3.897141 TCCCTTGTATCAACGCATGTA 57.103 42.857 0.00 0.00 0.00 2.29
2897 3366 3.792401 TCCCTTGTATCAACGCATGTAG 58.208 45.455 0.00 0.00 0.00 2.74
2898 3367 2.287915 CCCTTGTATCAACGCATGTAGC 59.712 50.000 0.00 0.00 40.87 3.58
2899 3368 3.198068 CCTTGTATCAACGCATGTAGCT 58.802 45.455 0.00 0.00 42.61 3.32
2900 3369 3.246226 CCTTGTATCAACGCATGTAGCTC 59.754 47.826 0.00 0.00 42.61 4.09
2901 3370 2.821546 TGTATCAACGCATGTAGCTCC 58.178 47.619 0.00 0.00 42.61 4.70
2902 3371 1.787155 GTATCAACGCATGTAGCTCCG 59.213 52.381 0.00 0.00 42.61 4.63
2903 3372 1.154205 ATCAACGCATGTAGCTCCGC 61.154 55.000 0.00 0.00 42.61 5.54
2904 3373 2.511600 AACGCATGTAGCTCCGCC 60.512 61.111 0.00 0.00 42.61 6.13
2905 3374 3.019003 AACGCATGTAGCTCCGCCT 62.019 57.895 0.00 0.00 42.61 5.52
2906 3375 2.659897 CGCATGTAGCTCCGCCTC 60.660 66.667 0.00 0.00 42.61 4.70
2907 3376 2.818132 GCATGTAGCTCCGCCTCT 59.182 61.111 0.00 0.00 41.15 3.69
2908 3377 1.796190 CGCATGTAGCTCCGCCTCTA 61.796 60.000 0.00 0.00 42.61 2.43
2909 3378 0.038709 GCATGTAGCTCCGCCTCTAG 60.039 60.000 0.00 0.00 41.15 2.43
2910 3379 1.323412 CATGTAGCTCCGCCTCTAGT 58.677 55.000 0.00 0.00 0.00 2.57
2911 3380 1.000827 CATGTAGCTCCGCCTCTAGTG 60.001 57.143 0.00 0.00 0.00 2.74
2912 3381 1.360911 GTAGCTCCGCCTCTAGTGC 59.639 63.158 0.00 0.00 0.00 4.40
2913 3382 1.076995 TAGCTCCGCCTCTAGTGCA 60.077 57.895 0.00 0.00 0.00 4.57
2914 3383 0.468214 TAGCTCCGCCTCTAGTGCAT 60.468 55.000 0.00 0.00 0.00 3.96
2915 3384 1.300542 GCTCCGCCTCTAGTGCATC 60.301 63.158 0.00 0.00 0.00 3.91
2916 3385 2.021068 GCTCCGCCTCTAGTGCATCA 62.021 60.000 0.00 0.00 0.00 3.07
2917 3386 0.678395 CTCCGCCTCTAGTGCATCAT 59.322 55.000 0.00 0.00 0.00 2.45
2918 3387 1.069823 CTCCGCCTCTAGTGCATCATT 59.930 52.381 0.00 0.00 0.00 2.57
2919 3388 1.202568 TCCGCCTCTAGTGCATCATTG 60.203 52.381 0.00 0.00 0.00 2.82
2933 3402 4.508461 CATCATTGCAGTCAAAGGTGAA 57.492 40.909 0.00 0.00 34.82 3.18
2934 3403 5.068234 CATCATTGCAGTCAAAGGTGAAT 57.932 39.130 0.00 0.00 34.82 2.57
2935 3404 5.475719 CATCATTGCAGTCAAAGGTGAATT 58.524 37.500 0.00 0.00 34.82 2.17
2936 3405 5.534207 TCATTGCAGTCAAAGGTGAATTT 57.466 34.783 0.00 0.00 34.87 1.82
2937 3406 6.647334 TCATTGCAGTCAAAGGTGAATTTA 57.353 33.333 0.00 0.00 34.87 1.40
2938 3407 7.230849 TCATTGCAGTCAAAGGTGAATTTAT 57.769 32.000 0.00 0.00 34.87 1.40
2939 3408 8.347004 TCATTGCAGTCAAAGGTGAATTTATA 57.653 30.769 0.00 0.00 34.87 0.98
2940 3409 8.461222 TCATTGCAGTCAAAGGTGAATTTATAG 58.539 33.333 0.00 0.00 34.87 1.31
2941 3410 6.757897 TGCAGTCAAAGGTGAATTTATAGG 57.242 37.500 0.00 0.00 34.87 2.57
2942 3411 5.125417 TGCAGTCAAAGGTGAATTTATAGGC 59.875 40.000 0.00 0.00 34.87 3.93
2943 3412 5.358160 GCAGTCAAAGGTGAATTTATAGGCT 59.642 40.000 0.00 0.00 34.87 4.58
2944 3413 6.678900 GCAGTCAAAGGTGAATTTATAGGCTG 60.679 42.308 0.00 0.00 34.87 4.85
2945 3414 5.358160 AGTCAAAGGTGAATTTATAGGCTGC 59.642 40.000 0.00 0.00 34.87 5.25
2946 3415 5.125417 GTCAAAGGTGAATTTATAGGCTGCA 59.875 40.000 0.50 0.00 34.87 4.41
2947 3416 5.714333 TCAAAGGTGAATTTATAGGCTGCAA 59.286 36.000 0.50 0.00 0.00 4.08
2948 3417 6.210385 TCAAAGGTGAATTTATAGGCTGCAAA 59.790 34.615 0.50 0.00 0.00 3.68
2949 3418 5.582689 AGGTGAATTTATAGGCTGCAAAC 57.417 39.130 0.50 0.00 0.00 2.93
2950 3419 5.016173 AGGTGAATTTATAGGCTGCAAACA 58.984 37.500 0.50 0.00 0.00 2.83
2951 3420 5.480073 AGGTGAATTTATAGGCTGCAAACAA 59.520 36.000 0.50 0.00 0.00 2.83
2952 3421 6.014669 AGGTGAATTTATAGGCTGCAAACAAA 60.015 34.615 0.50 0.00 0.00 2.83
2953 3422 6.648725 GGTGAATTTATAGGCTGCAAACAAAA 59.351 34.615 0.50 0.00 0.00 2.44
2954 3423 7.360017 GGTGAATTTATAGGCTGCAAACAAAAC 60.360 37.037 0.50 0.00 0.00 2.43
2955 3424 7.170658 GTGAATTTATAGGCTGCAAACAAAACA 59.829 33.333 0.50 0.02 0.00 2.83
2956 3425 7.170658 TGAATTTATAGGCTGCAAACAAAACAC 59.829 33.333 0.50 0.00 0.00 3.32
2957 3426 5.782893 TTATAGGCTGCAAACAAAACACT 57.217 34.783 0.50 0.00 0.00 3.55
2958 3427 6.885952 TTATAGGCTGCAAACAAAACACTA 57.114 33.333 0.50 0.00 0.00 2.74
2959 3428 3.436700 AGGCTGCAAACAAAACACTAC 57.563 42.857 0.50 0.00 0.00 2.73
2960 3429 2.100749 AGGCTGCAAACAAAACACTACC 59.899 45.455 0.50 0.00 0.00 3.18
2961 3430 2.116366 GCTGCAAACAAAACACTACCG 58.884 47.619 0.00 0.00 0.00 4.02
2962 3431 2.116366 CTGCAAACAAAACACTACCGC 58.884 47.619 0.00 0.00 0.00 5.68
2963 3432 1.202313 TGCAAACAAAACACTACCGCC 60.202 47.619 0.00 0.00 0.00 6.13
2964 3433 1.202313 GCAAACAAAACACTACCGCCA 60.202 47.619 0.00 0.00 0.00 5.69
2965 3434 2.544903 GCAAACAAAACACTACCGCCAT 60.545 45.455 0.00 0.00 0.00 4.40
2966 3435 3.049206 CAAACAAAACACTACCGCCATG 58.951 45.455 0.00 0.00 0.00 3.66
2967 3436 2.264005 ACAAAACACTACCGCCATGA 57.736 45.000 0.00 0.00 0.00 3.07
2968 3437 1.877443 ACAAAACACTACCGCCATGAC 59.123 47.619 0.00 0.00 0.00 3.06
2969 3438 1.136085 CAAAACACTACCGCCATGACG 60.136 52.381 0.00 0.00 0.00 4.35
2982 3451 3.691049 CCATGACGGCGTAAATTCATT 57.309 42.857 14.74 0.00 0.00 2.57
2983 3452 3.617669 CCATGACGGCGTAAATTCATTC 58.382 45.455 14.74 0.00 0.00 2.67
2984 3453 3.548014 CCATGACGGCGTAAATTCATTCC 60.548 47.826 14.74 0.00 0.00 3.01
2985 3454 2.701107 TGACGGCGTAAATTCATTCCA 58.299 42.857 14.74 0.00 0.00 3.53
2986 3455 2.675844 TGACGGCGTAAATTCATTCCAG 59.324 45.455 14.74 0.00 0.00 3.86
2987 3456 2.676342 GACGGCGTAAATTCATTCCAGT 59.324 45.455 14.74 0.00 0.00 4.00
2988 3457 3.078837 ACGGCGTAAATTCATTCCAGTT 58.921 40.909 12.58 0.00 0.00 3.16
2989 3458 3.119990 ACGGCGTAAATTCATTCCAGTTG 60.120 43.478 12.58 0.00 0.00 3.16
2990 3459 3.126171 CGGCGTAAATTCATTCCAGTTGA 59.874 43.478 0.00 0.00 0.00 3.18
2991 3460 4.662145 GGCGTAAATTCATTCCAGTTGAG 58.338 43.478 0.00 0.00 0.00 3.02
2992 3461 4.438744 GGCGTAAATTCATTCCAGTTGAGG 60.439 45.833 0.00 0.00 0.00 3.86
2993 3462 4.662145 CGTAAATTCATTCCAGTTGAGGC 58.338 43.478 0.00 0.00 0.00 4.70
2994 3463 4.155826 CGTAAATTCATTCCAGTTGAGGCA 59.844 41.667 0.00 0.00 0.00 4.75
2995 3464 5.335583 CGTAAATTCATTCCAGTTGAGGCAA 60.336 40.000 0.00 0.00 0.00 4.52
2996 3465 4.796038 AATTCATTCCAGTTGAGGCAAG 57.204 40.909 0.00 0.00 0.00 4.01
2997 3466 3.507162 TTCATTCCAGTTGAGGCAAGA 57.493 42.857 0.00 0.00 0.00 3.02
2998 3467 2.783135 TCATTCCAGTTGAGGCAAGAC 58.217 47.619 0.00 0.00 0.00 3.01
2999 3468 1.815003 CATTCCAGTTGAGGCAAGACC 59.185 52.381 0.00 0.00 39.61 3.85
3000 3469 0.843309 TTCCAGTTGAGGCAAGACCA 59.157 50.000 0.00 0.00 43.14 4.02
3001 3470 1.067295 TCCAGTTGAGGCAAGACCAT 58.933 50.000 0.00 0.00 43.14 3.55
3002 3471 1.003580 TCCAGTTGAGGCAAGACCATC 59.996 52.381 0.00 0.00 43.14 3.51
3003 3472 1.271543 CCAGTTGAGGCAAGACCATCA 60.272 52.381 0.00 0.00 43.14 3.07
3004 3473 2.619849 CCAGTTGAGGCAAGACCATCAT 60.620 50.000 0.00 0.00 43.14 2.45
3005 3474 2.681848 CAGTTGAGGCAAGACCATCATC 59.318 50.000 0.00 0.00 43.14 2.92
3006 3475 2.019984 GTTGAGGCAAGACCATCATCC 58.980 52.381 0.00 0.00 43.14 3.51
3007 3476 1.288188 TGAGGCAAGACCATCATCCA 58.712 50.000 0.00 0.00 43.14 3.41
3008 3477 1.211212 TGAGGCAAGACCATCATCCAG 59.789 52.381 0.00 0.00 43.14 3.86
3009 3478 0.549950 AGGCAAGACCATCATCCAGG 59.450 55.000 0.00 0.00 43.14 4.45
3010 3479 1.105759 GGCAAGACCATCATCCAGGC 61.106 60.000 0.00 0.00 38.86 4.85
3011 3480 0.394762 GCAAGACCATCATCCAGGCA 60.395 55.000 0.00 0.00 0.00 4.75
3012 3481 1.956636 GCAAGACCATCATCCAGGCAA 60.957 52.381 0.00 0.00 0.00 4.52
3013 3482 2.662866 CAAGACCATCATCCAGGCAAT 58.337 47.619 0.00 0.00 0.00 3.56
3014 3483 3.824133 CAAGACCATCATCCAGGCAATA 58.176 45.455 0.00 0.00 0.00 1.90
3015 3484 3.784511 AGACCATCATCCAGGCAATAG 57.215 47.619 0.00 0.00 0.00 1.73
3016 3485 2.374504 AGACCATCATCCAGGCAATAGG 59.625 50.000 0.00 0.00 0.00 2.57
3017 3486 1.426598 ACCATCATCCAGGCAATAGGG 59.573 52.381 0.00 0.00 0.00 3.53
3018 3487 1.272313 CCATCATCCAGGCAATAGGGG 60.272 57.143 0.00 0.00 0.00 4.79
3019 3488 0.407139 ATCATCCAGGCAATAGGGGC 59.593 55.000 0.00 0.00 0.00 5.80
3026 3495 4.181051 GCAATAGGGGCCATCCAC 57.819 61.111 4.39 0.00 37.22 4.02
3027 3496 1.531602 GCAATAGGGGCCATCCACC 60.532 63.158 4.39 0.00 35.98 4.61
3028 3497 1.228245 CAATAGGGGCCATCCACCG 60.228 63.158 4.39 0.00 35.98 4.94
3029 3498 1.385347 AATAGGGGCCATCCACCGA 60.385 57.895 4.39 0.00 35.98 4.69
3030 3499 1.705997 AATAGGGGCCATCCACCGAC 61.706 60.000 4.39 0.00 35.98 4.79
3031 3500 2.907482 ATAGGGGCCATCCACCGACA 62.907 60.000 4.39 0.00 35.98 4.35
3032 3501 4.041762 GGGGCCATCCACCGACAA 62.042 66.667 4.39 0.00 37.22 3.18
3033 3502 2.275418 GGGCCATCCACCGACAAT 59.725 61.111 4.39 0.00 35.00 2.71
3034 3503 2.120909 GGGCCATCCACCGACAATG 61.121 63.158 4.39 0.00 35.00 2.82
3035 3504 2.774799 GGCCATCCACCGACAATGC 61.775 63.158 0.00 0.00 0.00 3.56
3036 3505 2.045708 GCCATCCACCGACAATGCA 61.046 57.895 0.00 0.00 0.00 3.96
3037 3506 1.594194 GCCATCCACCGACAATGCAA 61.594 55.000 0.00 0.00 0.00 4.08
3038 3507 0.171007 CCATCCACCGACAATGCAAC 59.829 55.000 0.00 0.00 0.00 4.17
3039 3508 0.171007 CATCCACCGACAATGCAACC 59.829 55.000 0.00 0.00 0.00 3.77
3040 3509 0.038166 ATCCACCGACAATGCAACCT 59.962 50.000 0.00 0.00 0.00 3.50
3041 3510 0.179004 TCCACCGACAATGCAACCTT 60.179 50.000 0.00 0.00 0.00 3.50
3042 3511 0.039256 CCACCGACAATGCAACCTTG 60.039 55.000 0.00 0.00 0.00 3.61
3043 3512 0.667993 CACCGACAATGCAACCTTGT 59.332 50.000 3.87 3.87 39.46 3.16
3044 3513 0.951558 ACCGACAATGCAACCTTGTC 59.048 50.000 17.82 17.82 45.75 3.18
3049 3518 3.287312 ACAATGCAACCTTGTCAATCG 57.713 42.857 0.00 0.00 31.29 3.34
3050 3519 1.987770 CAATGCAACCTTGTCAATCGC 59.012 47.619 0.00 0.00 0.00 4.58
3051 3520 0.527565 ATGCAACCTTGTCAATCGCC 59.472 50.000 0.00 0.00 0.00 5.54
3052 3521 1.154225 GCAACCTTGTCAATCGCCG 60.154 57.895 0.00 0.00 0.00 6.46
3053 3522 1.501741 CAACCTTGTCAATCGCCGG 59.498 57.895 0.00 0.00 0.00 6.13
3054 3523 0.953471 CAACCTTGTCAATCGCCGGA 60.953 55.000 5.05 0.00 0.00 5.14
3055 3524 0.673644 AACCTTGTCAATCGCCGGAG 60.674 55.000 5.05 0.00 0.00 4.63
3056 3525 2.464459 CCTTGTCAATCGCCGGAGC 61.464 63.158 5.05 0.00 0.00 4.70
3057 3526 1.741401 CTTGTCAATCGCCGGAGCA 60.741 57.895 5.05 0.00 39.83 4.26
3058 3527 1.699656 CTTGTCAATCGCCGGAGCAG 61.700 60.000 5.05 0.00 39.83 4.24
3059 3528 2.892425 GTCAATCGCCGGAGCAGG 60.892 66.667 5.05 0.00 39.83 4.85
3075 3544 2.668550 GGCCACGGACTGGTCAAC 60.669 66.667 0.00 0.00 45.18 3.18
3076 3545 2.668550 GCCACGGACTGGTCAACC 60.669 66.667 3.10 0.00 42.99 3.77
3077 3546 2.825982 CCACGGACTGGTCAACCA 59.174 61.111 1.20 1.20 45.30 3.67
3078 3547 1.597027 CCACGGACTGGTCAACCAC 60.597 63.158 0.00 0.00 42.01 4.16
3079 3548 1.954146 CACGGACTGGTCAACCACG 60.954 63.158 8.59 8.59 42.01 4.94
3080 3549 2.357034 CGGACTGGTCAACCACGG 60.357 66.667 0.00 0.00 42.01 4.94
3081 3550 2.826702 GGACTGGTCAACCACGGT 59.173 61.111 0.00 0.00 42.01 4.83
3082 3551 1.808531 CGGACTGGTCAACCACGGTA 61.809 60.000 0.00 0.00 42.01 4.02
3083 3552 0.320160 GGACTGGTCAACCACGGTAC 60.320 60.000 0.00 0.00 42.01 3.34
3084 3553 0.677842 GACTGGTCAACCACGGTACT 59.322 55.000 0.00 0.00 42.01 2.73
3085 3554 1.069668 GACTGGTCAACCACGGTACTT 59.930 52.381 0.00 0.00 42.01 2.24
3086 3555 1.069668 ACTGGTCAACCACGGTACTTC 59.930 52.381 0.00 0.00 42.01 3.01
3087 3556 1.343465 CTGGTCAACCACGGTACTTCT 59.657 52.381 0.00 0.00 42.01 2.85
3088 3557 1.069513 TGGTCAACCACGGTACTTCTG 59.930 52.381 0.00 0.00 42.01 3.02
3089 3558 1.069668 GGTCAACCACGGTACTTCTGT 59.930 52.381 0.00 0.00 35.83 3.41
3090 3559 2.297033 GGTCAACCACGGTACTTCTGTA 59.703 50.000 0.00 0.00 33.83 2.74
3091 3560 3.572584 GTCAACCACGGTACTTCTGTAG 58.427 50.000 0.00 0.00 33.83 2.74
3092 3561 2.559668 TCAACCACGGTACTTCTGTAGG 59.440 50.000 0.00 0.00 33.83 3.18
3093 3562 0.893447 ACCACGGTACTTCTGTAGGC 59.107 55.000 0.00 0.00 33.83 3.93
3094 3563 0.892755 CCACGGTACTTCTGTAGGCA 59.107 55.000 0.00 0.00 33.83 4.75
3095 3564 1.480954 CCACGGTACTTCTGTAGGCAT 59.519 52.381 0.00 0.00 33.83 4.40
3096 3565 2.481449 CCACGGTACTTCTGTAGGCATC 60.481 54.545 0.00 0.00 33.83 3.91
3097 3566 2.165641 CACGGTACTTCTGTAGGCATCA 59.834 50.000 0.00 0.00 33.83 3.07
3098 3567 3.031736 ACGGTACTTCTGTAGGCATCAT 58.968 45.455 0.00 0.00 33.34 2.45
3099 3568 3.068307 ACGGTACTTCTGTAGGCATCATC 59.932 47.826 0.00 0.00 33.34 2.92
3100 3569 3.643763 GGTACTTCTGTAGGCATCATCG 58.356 50.000 0.00 0.00 0.00 3.84
3101 3570 3.068307 GGTACTTCTGTAGGCATCATCGT 59.932 47.826 0.00 0.00 0.00 3.73
3102 3571 3.444703 ACTTCTGTAGGCATCATCGTC 57.555 47.619 0.00 0.00 0.00 4.20
3103 3572 2.101582 ACTTCTGTAGGCATCATCGTCC 59.898 50.000 0.00 0.00 0.00 4.79
3104 3573 1.040646 TCTGTAGGCATCATCGTCCC 58.959 55.000 0.00 0.00 0.00 4.46
3105 3574 0.752658 CTGTAGGCATCATCGTCCCA 59.247 55.000 0.00 0.00 0.00 4.37
3106 3575 1.138859 CTGTAGGCATCATCGTCCCAA 59.861 52.381 0.00 0.00 0.00 4.12
3107 3576 1.134521 TGTAGGCATCATCGTCCCAAC 60.135 52.381 0.00 0.00 0.00 3.77
3108 3577 1.134521 GTAGGCATCATCGTCCCAACA 60.135 52.381 0.00 0.00 0.00 3.33
3109 3578 0.548031 AGGCATCATCGTCCCAACAT 59.452 50.000 0.00 0.00 0.00 2.71
3110 3579 0.947244 GGCATCATCGTCCCAACATC 59.053 55.000 0.00 0.00 0.00 3.06
3111 3580 1.667236 GCATCATCGTCCCAACATCA 58.333 50.000 0.00 0.00 0.00 3.07
3112 3581 2.016318 GCATCATCGTCCCAACATCAA 58.984 47.619 0.00 0.00 0.00 2.57
3113 3582 2.223340 GCATCATCGTCCCAACATCAAC 60.223 50.000 0.00 0.00 0.00 3.18
3114 3583 2.107950 TCATCGTCCCAACATCAACC 57.892 50.000 0.00 0.00 0.00 3.77
3115 3584 0.726827 CATCGTCCCAACATCAACCG 59.273 55.000 0.00 0.00 0.00 4.44
3116 3585 0.392461 ATCGTCCCAACATCAACCGG 60.392 55.000 0.00 0.00 0.00 5.28
3117 3586 2.686816 CGTCCCAACATCAACCGGC 61.687 63.158 0.00 0.00 0.00 6.13
3118 3587 2.359354 TCCCAACATCAACCGGCG 60.359 61.111 0.00 0.00 0.00 6.46
3119 3588 2.359354 CCCAACATCAACCGGCGA 60.359 61.111 9.30 0.00 0.00 5.54
3120 3589 2.686816 CCCAACATCAACCGGCGAC 61.687 63.158 9.30 0.00 0.00 5.19
3121 3590 1.963855 CCAACATCAACCGGCGACA 60.964 57.895 9.30 0.00 0.00 4.35
3122 3591 1.305219 CCAACATCAACCGGCGACAT 61.305 55.000 9.30 0.00 0.00 3.06
3123 3592 0.521291 CAACATCAACCGGCGACATT 59.479 50.000 9.30 0.00 0.00 2.71
3124 3593 1.068610 CAACATCAACCGGCGACATTT 60.069 47.619 9.30 0.00 0.00 2.32
3125 3594 1.243902 ACATCAACCGGCGACATTTT 58.756 45.000 9.30 0.00 0.00 1.82
3126 3595 1.068610 ACATCAACCGGCGACATTTTG 60.069 47.619 9.30 3.66 0.00 2.44
3127 3596 0.109319 ATCAACCGGCGACATTTTGC 60.109 50.000 9.30 0.00 0.00 3.68
3134 3603 2.959507 GGCGACATTTTGCCCTTTAT 57.040 45.000 0.00 0.00 45.93 1.40
3135 3604 2.809446 GGCGACATTTTGCCCTTTATC 58.191 47.619 0.00 0.00 45.93 1.75
3136 3605 2.165437 GGCGACATTTTGCCCTTTATCA 59.835 45.455 0.00 0.00 45.93 2.15
3137 3606 3.181476 GGCGACATTTTGCCCTTTATCAT 60.181 43.478 0.00 0.00 45.93 2.45
3138 3607 4.044426 GCGACATTTTGCCCTTTATCATC 58.956 43.478 0.00 0.00 0.00 2.92
3139 3608 4.202050 GCGACATTTTGCCCTTTATCATCT 60.202 41.667 0.00 0.00 0.00 2.90
3140 3609 5.514279 CGACATTTTGCCCTTTATCATCTC 58.486 41.667 0.00 0.00 0.00 2.75
3141 3610 5.297776 CGACATTTTGCCCTTTATCATCTCT 59.702 40.000 0.00 0.00 0.00 3.10
3142 3611 6.483307 CGACATTTTGCCCTTTATCATCTCTA 59.517 38.462 0.00 0.00 0.00 2.43
3143 3612 7.519008 CGACATTTTGCCCTTTATCATCTCTAC 60.519 40.741 0.00 0.00 0.00 2.59
3144 3613 7.349598 ACATTTTGCCCTTTATCATCTCTACT 58.650 34.615 0.00 0.00 0.00 2.57
3145 3614 7.284034 ACATTTTGCCCTTTATCATCTCTACTG 59.716 37.037 0.00 0.00 0.00 2.74
3146 3615 5.957771 TTGCCCTTTATCATCTCTACTGT 57.042 39.130 0.00 0.00 0.00 3.55
3147 3616 5.957771 TGCCCTTTATCATCTCTACTGTT 57.042 39.130 0.00 0.00 0.00 3.16
3148 3617 5.674525 TGCCCTTTATCATCTCTACTGTTG 58.325 41.667 0.00 0.00 0.00 3.33
3149 3618 5.425217 TGCCCTTTATCATCTCTACTGTTGA 59.575 40.000 0.00 0.00 0.00 3.18
3150 3619 5.755861 GCCCTTTATCATCTCTACTGTTGAC 59.244 44.000 0.00 0.00 0.00 3.18
3151 3620 6.284459 CCCTTTATCATCTCTACTGTTGACC 58.716 44.000 0.00 0.00 0.00 4.02
3152 3621 6.098982 CCCTTTATCATCTCTACTGTTGACCT 59.901 42.308 0.00 0.00 0.00 3.85
3153 3622 7.206687 CCTTTATCATCTCTACTGTTGACCTC 58.793 42.308 0.00 0.00 0.00 3.85
3154 3623 7.147828 CCTTTATCATCTCTACTGTTGACCTCA 60.148 40.741 0.00 0.00 0.00 3.86
3155 3624 7.904558 TTATCATCTCTACTGTTGACCTCAT 57.095 36.000 0.00 0.00 0.00 2.90
3156 3625 5.843673 TCATCTCTACTGTTGACCTCATC 57.156 43.478 0.00 0.00 0.00 2.92
3157 3626 4.336713 TCATCTCTACTGTTGACCTCATCG 59.663 45.833 0.00 0.00 0.00 3.84
3158 3627 3.951663 TCTCTACTGTTGACCTCATCGA 58.048 45.455 0.00 0.00 0.00 3.59
3159 3628 3.690139 TCTCTACTGTTGACCTCATCGAC 59.310 47.826 0.00 0.00 41.64 4.20
3161 3630 2.440539 ACTGTTGACCTCATCGACAC 57.559 50.000 0.00 0.00 45.36 3.67
3162 3631 1.686587 ACTGTTGACCTCATCGACACA 59.313 47.619 0.00 0.00 45.36 3.72
3163 3632 2.300152 ACTGTTGACCTCATCGACACAT 59.700 45.455 0.00 0.00 45.36 3.21
3164 3633 3.509967 ACTGTTGACCTCATCGACACATA 59.490 43.478 0.00 0.00 45.36 2.29
3165 3634 4.021456 ACTGTTGACCTCATCGACACATAA 60.021 41.667 0.00 0.00 45.36 1.90
3166 3635 4.888917 TGTTGACCTCATCGACACATAAA 58.111 39.130 0.00 0.00 45.36 1.40
3167 3636 5.487433 TGTTGACCTCATCGACACATAAAT 58.513 37.500 0.00 0.00 45.36 1.40
3168 3637 5.937540 TGTTGACCTCATCGACACATAAATT 59.062 36.000 0.00 0.00 45.36 1.82
3169 3638 6.429692 TGTTGACCTCATCGACACATAAATTT 59.570 34.615 0.00 0.00 45.36 1.82
3170 3639 7.040755 TGTTGACCTCATCGACACATAAATTTT 60.041 33.333 0.00 0.00 45.36 1.82
3171 3640 7.072177 TGACCTCATCGACACATAAATTTTC 57.928 36.000 0.00 0.00 0.00 2.29
3172 3641 6.878923 TGACCTCATCGACACATAAATTTTCT 59.121 34.615 0.00 0.00 0.00 2.52
3173 3642 7.390440 TGACCTCATCGACACATAAATTTTCTT 59.610 33.333 0.00 0.00 0.00 2.52
3174 3643 8.110860 ACCTCATCGACACATAAATTTTCTTT 57.889 30.769 0.00 0.00 0.00 2.52
3175 3644 8.237267 ACCTCATCGACACATAAATTTTCTTTC 58.763 33.333 0.00 0.00 0.00 2.62
3176 3645 8.236586 CCTCATCGACACATAAATTTTCTTTCA 58.763 33.333 0.00 0.00 0.00 2.69
3177 3646 9.270576 CTCATCGACACATAAATTTTCTTTCAG 57.729 33.333 0.00 0.00 0.00 3.02
3178 3647 8.783093 TCATCGACACATAAATTTTCTTTCAGT 58.217 29.630 0.00 0.00 0.00 3.41
3195 3664 8.959705 TCTTTCAGTATCAGTAGATAACGAGA 57.040 34.615 0.00 0.00 38.41 4.04
3196 3665 9.047371 TCTTTCAGTATCAGTAGATAACGAGAG 57.953 37.037 0.00 0.00 38.41 3.20
3197 3666 8.734218 TTTCAGTATCAGTAGATAACGAGAGT 57.266 34.615 0.00 0.00 38.41 3.24
3207 3676 4.475527 ACGAGAGTTTGTTGGGCC 57.524 55.556 0.00 0.00 46.40 5.80
3208 3677 1.529796 ACGAGAGTTTGTTGGGCCA 59.470 52.632 0.00 0.00 46.40 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
185 189 6.401394 GGGGTTATATTACATCCCGTCTAAC 58.599 44.000 0.00 0.00 39.06 2.34
227 231 4.869861 GCAACAGAGAGCCAAAAAGAAAAA 59.130 37.500 0.00 0.00 0.00 1.94
228 232 4.160252 AGCAACAGAGAGCCAAAAAGAAAA 59.840 37.500 0.00 0.00 0.00 2.29
229 233 3.701040 AGCAACAGAGAGCCAAAAAGAAA 59.299 39.130 0.00 0.00 0.00 2.52
230 234 3.290710 AGCAACAGAGAGCCAAAAAGAA 58.709 40.909 0.00 0.00 0.00 2.52
231 235 2.936202 AGCAACAGAGAGCCAAAAAGA 58.064 42.857 0.00 0.00 0.00 2.52
232 236 3.722728 AAGCAACAGAGAGCCAAAAAG 57.277 42.857 0.00 0.00 0.00 2.27
233 237 3.784338 CAAAGCAACAGAGAGCCAAAAA 58.216 40.909 0.00 0.00 0.00 1.94
234 238 2.481795 GCAAAGCAACAGAGAGCCAAAA 60.482 45.455 0.00 0.00 0.00 2.44
235 239 1.067516 GCAAAGCAACAGAGAGCCAAA 59.932 47.619 0.00 0.00 0.00 3.28
236 240 0.670162 GCAAAGCAACAGAGAGCCAA 59.330 50.000 0.00 0.00 0.00 4.52
237 241 0.179009 AGCAAAGCAACAGAGAGCCA 60.179 50.000 0.00 0.00 0.00 4.75
238 242 0.957362 AAGCAAAGCAACAGAGAGCC 59.043 50.000 0.00 0.00 0.00 4.70
239 243 1.929482 GCAAGCAAAGCAACAGAGAGC 60.929 52.381 0.00 0.00 0.00 4.09
240 244 1.662309 CGCAAGCAAAGCAACAGAGAG 60.662 52.381 0.00 0.00 0.00 3.20
241 245 0.308684 CGCAAGCAAAGCAACAGAGA 59.691 50.000 0.00 0.00 0.00 3.10
242 246 2.792374 CGCAAGCAAAGCAACAGAG 58.208 52.632 0.00 0.00 0.00 3.35
258 262 2.256461 CAGGAAGGTGCAAAGCGC 59.744 61.111 0.00 0.00 42.89 5.92
259 263 2.256461 GCAGGAAGGTGCAAAGCG 59.744 61.111 0.00 0.00 43.41 4.68
265 269 2.575461 GCCATTGCAGGAAGGTGC 59.425 61.111 0.00 0.00 44.27 5.01
266 270 1.186917 TTGGCCATTGCAGGAAGGTG 61.187 55.000 6.09 0.00 40.13 4.00
267 271 0.901580 CTTGGCCATTGCAGGAAGGT 60.902 55.000 6.09 0.00 40.13 3.50
268 272 1.895238 CTTGGCCATTGCAGGAAGG 59.105 57.895 6.09 0.00 40.13 3.46
269 273 1.217244 GCTTGGCCATTGCAGGAAG 59.783 57.895 21.72 9.08 40.13 3.46
270 274 3.379880 GCTTGGCCATTGCAGGAA 58.620 55.556 21.72 0.00 40.13 3.36
519 910 6.134040 TGTATCGTATCACATCAACGGTTA 57.866 37.500 0.00 0.00 37.24 2.85
520 911 5.001237 TGTATCGTATCACATCAACGGTT 57.999 39.130 0.00 0.00 37.24 4.44
544 940 1.006571 CGACCAACGGCAGTAGTGT 60.007 57.895 0.00 0.00 38.46 3.55
580 976 1.231221 CTCCTCTGAGCGCTACGTAT 58.769 55.000 11.50 0.00 0.00 3.06
586 982 1.188219 TTTGGACTCCTCTGAGCGCT 61.188 55.000 11.27 11.27 42.74 5.92
632 1028 1.765314 CATCCAGGTGTCCTTAGGAGG 59.235 57.143 0.00 0.00 45.02 4.30
868 1270 1.947146 TCCGTCGACTGTTGCGTTG 60.947 57.895 14.70 0.00 0.00 4.10
872 1274 1.299926 AGTGTCCGTCGACTGTTGC 60.300 57.895 14.70 1.22 39.94 4.17
874 1276 1.299926 GCAGTGTCCGTCGACTGTT 60.300 57.895 14.70 0.00 41.47 3.16
999 1417 3.372676 GAGCAGCGCGTGTTCCATG 62.373 63.158 8.43 0.00 30.28 3.66
1182 1603 1.048601 GGCGGAGGTAGATGATGGAA 58.951 55.000 0.00 0.00 0.00 3.53
1380 1801 3.883744 CTTCTTCCCCACGCGCAGT 62.884 63.158 5.73 3.19 0.00 4.40
1497 1918 4.783621 AGCCACACGCCGATGCAT 62.784 61.111 0.00 0.00 38.78 3.96
1554 1975 2.901042 CCGTCCTTGCTAGGGTCC 59.099 66.667 14.51 2.29 42.26 4.46
1737 2161 2.800541 CCCTATCCGCTGCAGCTCA 61.801 63.158 34.22 21.57 39.32 4.26
2116 2540 0.951040 CCCACAGCAGAACCTTCGAC 60.951 60.000 0.00 0.00 0.00 4.20
2172 2596 0.320374 TGTCCTTGTCCACATCGACC 59.680 55.000 0.00 0.00 31.35 4.79
2174 2598 1.001974 CCTTGTCCTTGTCCACATCGA 59.998 52.381 0.00 0.00 0.00 3.59
2181 2605 0.324943 TAGCTGCCTTGTCCTTGTCC 59.675 55.000 0.00 0.00 0.00 4.02
2194 2618 1.227292 GAACCTACCGGCTAGCTGC 60.227 63.158 18.67 0.00 41.94 5.25
2206 2630 6.272318 TGTTTCTTTTCTACGTTCGAACCTA 58.728 36.000 22.07 13.83 0.00 3.08
2230 2654 6.321181 CAGCTTCTAGTAGATTCAGAAGTCCT 59.679 42.308 0.00 0.42 44.62 3.85
2254 2678 1.840630 CGCATGCGTGGAAGAACACA 61.841 55.000 31.33 0.00 41.38 3.72
2332 2756 1.457346 CCTCAACAGGGCATCTTGAC 58.543 55.000 0.00 0.00 35.89 3.18
2485 2947 1.394963 AGGGTGTATCCGGTCCCTT 59.605 57.895 0.00 0.00 46.99 3.95
2506 2968 9.920946 AGTATGTACTTTAATTTCCATGTGGAT 57.079 29.630 1.98 0.00 37.36 3.41
2526 2988 8.630037 CAAAAGAAGTTCAAAACCCTAGTATGT 58.370 33.333 5.50 0.00 0.00 2.29
2543 3005 2.623416 CCCTTTTCCTCGCAAAAGAAGT 59.377 45.455 12.85 0.00 43.41 3.01
2546 3008 2.158667 ACTCCCTTTTCCTCGCAAAAGA 60.159 45.455 12.85 0.00 43.41 2.52
2547 3009 2.230660 ACTCCCTTTTCCTCGCAAAAG 58.769 47.619 6.95 6.95 41.32 2.27
2552 3015 3.377485 GGAATAAACTCCCTTTTCCTCGC 59.623 47.826 0.00 0.00 34.36 5.03
2577 3040 9.314321 CCGTTACTTGATTGTAACTCTATCATT 57.686 33.333 13.33 0.00 45.84 2.57
2578 3041 8.475639 ACCGTTACTTGATTGTAACTCTATCAT 58.524 33.333 13.33 0.00 45.84 2.45
2579 3042 7.833786 ACCGTTACTTGATTGTAACTCTATCA 58.166 34.615 13.33 0.00 45.84 2.15
2580 3043 9.448294 CTACCGTTACTTGATTGTAACTCTATC 57.552 37.037 13.33 0.00 45.84 2.08
2581 3044 8.964772 ACTACCGTTACTTGATTGTAACTCTAT 58.035 33.333 13.33 2.42 45.84 1.98
2582 3045 8.340618 ACTACCGTTACTTGATTGTAACTCTA 57.659 34.615 13.33 4.48 45.84 2.43
2584 3047 7.620806 GCAACTACCGTTACTTGATTGTAACTC 60.621 40.741 13.33 0.00 45.84 3.01
2597 3060 8.103948 TCCTTATATAGAGCAACTACCGTTAC 57.896 38.462 0.00 0.00 33.62 2.50
2599 3062 6.208994 CCTCCTTATATAGAGCAACTACCGTT 59.791 42.308 0.00 0.00 33.62 4.44
2602 3065 6.017830 ACCCTCCTTATATAGAGCAACTACC 58.982 44.000 0.00 0.00 33.62 3.18
2603 3066 6.153170 GGACCCTCCTTATATAGAGCAACTAC 59.847 46.154 0.00 0.00 31.63 2.73
2607 3070 5.355670 AGGACCCTCCTTATATAGAGCAA 57.644 43.478 0.00 0.00 46.91 3.91
2620 3083 1.002011 GCTTGGTGAAGGACCCTCC 60.002 63.158 0.00 0.00 45.45 4.30
2622 3085 1.774217 TGGCTTGGTGAAGGACCCT 60.774 57.895 0.00 0.00 45.45 4.34
2631 3094 0.806868 CATAGCTGTGTGGCTTGGTG 59.193 55.000 1.64 0.00 42.97 4.17
2639 3102 1.369091 GAACGGGCCATAGCTGTGTG 61.369 60.000 4.39 2.42 39.73 3.82
2640 3103 1.078426 GAACGGGCCATAGCTGTGT 60.078 57.895 4.39 0.00 39.73 3.72
2643 3106 0.464036 TAGTGAACGGGCCATAGCTG 59.536 55.000 4.39 0.00 39.73 4.24
2644 3107 1.139058 CTTAGTGAACGGGCCATAGCT 59.861 52.381 4.39 0.00 39.73 3.32
2647 3110 2.463752 AGTCTTAGTGAACGGGCCATA 58.536 47.619 4.39 0.00 0.00 2.74
2648 3111 1.276622 AGTCTTAGTGAACGGGCCAT 58.723 50.000 4.39 0.00 0.00 4.40
2649 3112 1.927487 TAGTCTTAGTGAACGGGCCA 58.073 50.000 4.39 0.00 0.00 5.36
2650 3113 4.868314 ATATAGTCTTAGTGAACGGGCC 57.132 45.455 0.00 0.00 0.00 5.80
2663 3131 6.647067 GCAGATCGTTTGGCTTTATATAGTCT 59.353 38.462 0.00 0.00 0.00 3.24
2664 3132 6.647067 AGCAGATCGTTTGGCTTTATATAGTC 59.353 38.462 0.00 0.00 31.34 2.59
2686 3154 5.738619 TGAGGAAACATAACAGAGTAGCA 57.261 39.130 0.00 0.00 0.00 3.49
2692 3160 8.405531 CAGAAACTTTTGAGGAAACATAACAGA 58.594 33.333 0.00 0.00 0.00 3.41
2695 3163 8.621286 TCTCAGAAACTTTTGAGGAAACATAAC 58.379 33.333 9.42 0.00 40.89 1.89
2698 3166 7.645058 TTCTCAGAAACTTTTGAGGAAACAT 57.355 32.000 9.42 0.00 40.89 2.71
2721 3189 6.430000 ACACATGCTAGTTCGGAAGTTTATTT 59.570 34.615 2.98 0.00 0.00 1.40
2730 3198 1.403647 CGGAACACATGCTAGTTCGGA 60.404 52.381 19.84 0.00 43.53 4.55
2737 3205 2.760650 AGAGATCACGGAACACATGCTA 59.239 45.455 0.00 0.00 0.00 3.49
2750 3218 3.929610 GGTGTCTAAGTTGCAGAGATCAC 59.070 47.826 0.00 0.00 0.00 3.06
2765 3233 1.686587 CAGGTCGGCATATGGTGTCTA 59.313 52.381 4.56 0.00 0.00 2.59
2768 3236 0.980754 TCCAGGTCGGCATATGGTGT 60.981 55.000 4.56 0.00 34.32 4.16
2769 3237 0.180171 TTCCAGGTCGGCATATGGTG 59.820 55.000 4.56 0.00 34.32 4.17
2801 3270 5.625150 ACTCTAAAGCCTTGTCATGTCTTT 58.375 37.500 0.00 1.12 0.00 2.52
2813 3282 6.156949 TGTCCAATCAGATTACTCTAAAGCCT 59.843 38.462 0.00 0.00 0.00 4.58
2814 3283 6.349300 TGTCCAATCAGATTACTCTAAAGCC 58.651 40.000 0.00 0.00 0.00 4.35
2815 3284 7.849804 TTGTCCAATCAGATTACTCTAAAGC 57.150 36.000 0.00 0.00 0.00 3.51
2816 3285 9.605275 TCATTGTCCAATCAGATTACTCTAAAG 57.395 33.333 0.00 0.00 0.00 1.85
2820 3289 8.932610 AGTATCATTGTCCAATCAGATTACTCT 58.067 33.333 0.00 0.00 0.00 3.24
2821 3290 9.202273 GAGTATCATTGTCCAATCAGATTACTC 57.798 37.037 0.00 0.00 33.17 2.59
2822 3291 8.153550 GGAGTATCATTGTCCAATCAGATTACT 58.846 37.037 0.00 0.00 36.25 2.24
2823 3292 7.389053 GGGAGTATCATTGTCCAATCAGATTAC 59.611 40.741 0.00 0.00 36.25 1.89
2824 3293 7.453393 GGGAGTATCATTGTCCAATCAGATTA 58.547 38.462 0.00 0.00 36.25 1.75
2825 3294 6.302269 GGGAGTATCATTGTCCAATCAGATT 58.698 40.000 0.00 0.00 36.25 2.40
2826 3295 5.222007 GGGGAGTATCATTGTCCAATCAGAT 60.222 44.000 0.00 0.00 36.25 2.90
2827 3296 4.103153 GGGGAGTATCATTGTCCAATCAGA 59.897 45.833 0.00 0.00 36.25 3.27
2828 3297 4.103785 AGGGGAGTATCATTGTCCAATCAG 59.896 45.833 0.00 0.00 36.25 2.90
2829 3298 4.047166 AGGGGAGTATCATTGTCCAATCA 58.953 43.478 0.00 0.00 36.25 2.57
2830 3299 4.713792 AGGGGAGTATCATTGTCCAATC 57.286 45.455 0.00 0.00 36.25 2.67
2831 3300 4.444876 CGAAGGGGAGTATCATTGTCCAAT 60.445 45.833 0.00 0.00 36.25 3.16
2832 3301 3.118408 CGAAGGGGAGTATCATTGTCCAA 60.118 47.826 0.00 0.00 36.25 3.53
2833 3302 2.434336 CGAAGGGGAGTATCATTGTCCA 59.566 50.000 0.00 0.00 36.25 4.02
2834 3303 2.698797 TCGAAGGGGAGTATCATTGTCC 59.301 50.000 0.00 0.00 36.25 4.02
2835 3304 3.385111 ACTCGAAGGGGAGTATCATTGTC 59.615 47.826 0.00 0.00 45.14 3.18
2836 3305 3.133003 CACTCGAAGGGGAGTATCATTGT 59.867 47.826 0.00 0.00 45.20 2.71
2837 3306 3.133003 ACACTCGAAGGGGAGTATCATTG 59.867 47.826 0.00 0.00 45.20 2.82
2838 3307 3.375699 ACACTCGAAGGGGAGTATCATT 58.624 45.455 0.00 0.00 45.20 2.57
2839 3308 3.033659 ACACTCGAAGGGGAGTATCAT 57.966 47.619 0.00 0.00 45.20 2.45
2840 3309 2.496070 CAACACTCGAAGGGGAGTATCA 59.504 50.000 0.00 0.00 45.20 2.15
2841 3310 2.159085 CCAACACTCGAAGGGGAGTATC 60.159 54.545 0.00 0.00 45.20 2.24
2842 3311 1.831736 CCAACACTCGAAGGGGAGTAT 59.168 52.381 0.00 0.00 45.20 2.12
2843 3312 1.203087 TCCAACACTCGAAGGGGAGTA 60.203 52.381 0.00 0.00 45.20 2.59
2845 3314 0.905357 ATCCAACACTCGAAGGGGAG 59.095 55.000 0.00 0.00 39.97 4.30
2846 3315 1.278127 GAATCCAACACTCGAAGGGGA 59.722 52.381 0.00 0.00 0.00 4.81
2847 3316 1.279271 AGAATCCAACACTCGAAGGGG 59.721 52.381 0.00 0.00 0.00 4.79
2848 3317 2.028112 TGAGAATCCAACACTCGAAGGG 60.028 50.000 0.00 0.00 33.93 3.95
2849 3318 3.319137 TGAGAATCCAACACTCGAAGG 57.681 47.619 0.00 0.00 33.93 3.46
2850 3319 3.681897 CCTTGAGAATCCAACACTCGAAG 59.318 47.826 0.00 0.00 33.93 3.79
2851 3320 3.664107 CCTTGAGAATCCAACACTCGAA 58.336 45.455 0.00 0.00 33.93 3.71
2852 3321 2.612972 GCCTTGAGAATCCAACACTCGA 60.613 50.000 0.00 0.00 33.93 4.04
2853 3322 1.734465 GCCTTGAGAATCCAACACTCG 59.266 52.381 0.00 0.00 33.93 4.18
2854 3323 2.087646 GGCCTTGAGAATCCAACACTC 58.912 52.381 0.00 0.00 0.00 3.51
2855 3324 1.425066 TGGCCTTGAGAATCCAACACT 59.575 47.619 3.32 0.00 0.00 3.55
2856 3325 1.909700 TGGCCTTGAGAATCCAACAC 58.090 50.000 3.32 0.00 0.00 3.32
2857 3326 2.621407 GGATGGCCTTGAGAATCCAACA 60.621 50.000 11.70 0.00 38.78 3.33
2858 3327 2.027385 GGATGGCCTTGAGAATCCAAC 58.973 52.381 11.70 0.00 38.78 3.77
2859 3328 1.063717 GGGATGGCCTTGAGAATCCAA 60.064 52.381 16.97 0.00 40.38 3.53
2860 3329 0.552848 GGGATGGCCTTGAGAATCCA 59.447 55.000 16.97 0.00 40.38 3.41
2861 3330 0.849417 AGGGATGGCCTTGAGAATCC 59.151 55.000 3.32 6.65 38.30 3.01
2862 3331 2.305009 CAAGGGATGGCCTTGAGAATC 58.695 52.381 3.32 0.00 45.09 2.52
2863 3332 1.642762 ACAAGGGATGGCCTTGAGAAT 59.357 47.619 6.70 0.00 45.09 2.40
2864 3333 1.075601 ACAAGGGATGGCCTTGAGAA 58.924 50.000 6.70 0.00 45.09 2.87
2865 3334 1.965414 TACAAGGGATGGCCTTGAGA 58.035 50.000 6.70 0.00 45.09 3.27
2866 3335 2.173356 TGATACAAGGGATGGCCTTGAG 59.827 50.000 6.70 0.00 45.09 3.02
2867 3336 2.204463 TGATACAAGGGATGGCCTTGA 58.796 47.619 6.70 0.00 45.09 3.02
2868 3337 2.689983 GTTGATACAAGGGATGGCCTTG 59.310 50.000 3.32 0.85 46.89 3.61
2869 3338 2.683742 CGTTGATACAAGGGATGGCCTT 60.684 50.000 3.32 0.00 0.00 4.35
2870 3339 1.134098 CGTTGATACAAGGGATGGCCT 60.134 52.381 3.32 0.00 0.00 5.19
2871 3340 1.308998 CGTTGATACAAGGGATGGCC 58.691 55.000 0.00 0.00 0.00 5.36
2872 3341 0.663153 GCGTTGATACAAGGGATGGC 59.337 55.000 0.00 0.00 0.00 4.40
2873 3342 2.036958 TGCGTTGATACAAGGGATGG 57.963 50.000 0.00 0.00 0.00 3.51
2874 3343 2.945008 ACATGCGTTGATACAAGGGATG 59.055 45.455 24.90 24.90 38.96 3.51
2875 3344 3.281727 ACATGCGTTGATACAAGGGAT 57.718 42.857 0.00 0.00 0.00 3.85
2876 3345 2.779755 ACATGCGTTGATACAAGGGA 57.220 45.000 0.00 0.00 0.00 4.20
2877 3346 2.287915 GCTACATGCGTTGATACAAGGG 59.712 50.000 0.00 0.00 0.00 3.95
2878 3347 3.592381 GCTACATGCGTTGATACAAGG 57.408 47.619 0.00 0.00 0.00 3.61
2898 3367 0.678395 ATGATGCACTAGAGGCGGAG 59.322 55.000 0.00 0.00 0.00 4.63
2899 3368 1.123077 AATGATGCACTAGAGGCGGA 58.877 50.000 0.00 0.00 0.00 5.54
2900 3369 1.224075 CAATGATGCACTAGAGGCGG 58.776 55.000 0.00 0.00 0.00 6.13
2912 3381 4.508461 TTCACCTTTGACTGCAATGATG 57.492 40.909 0.00 0.00 33.25 3.07
2913 3382 5.733620 AATTCACCTTTGACTGCAATGAT 57.266 34.783 0.00 0.00 33.25 2.45
2914 3383 5.534207 AAATTCACCTTTGACTGCAATGA 57.466 34.783 0.00 0.00 33.25 2.57
2915 3384 7.703621 CCTATAAATTCACCTTTGACTGCAATG 59.296 37.037 0.00 0.00 33.25 2.82
2916 3385 7.631377 GCCTATAAATTCACCTTTGACTGCAAT 60.631 37.037 0.00 0.00 33.25 3.56
2917 3386 6.350110 GCCTATAAATTCACCTTTGACTGCAA 60.350 38.462 0.00 0.00 0.00 4.08
2918 3387 5.125417 GCCTATAAATTCACCTTTGACTGCA 59.875 40.000 0.00 0.00 0.00 4.41
2919 3388 5.358160 AGCCTATAAATTCACCTTTGACTGC 59.642 40.000 0.00 0.00 0.00 4.40
2920 3389 6.678900 GCAGCCTATAAATTCACCTTTGACTG 60.679 42.308 0.00 0.00 0.00 3.51
2921 3390 5.358160 GCAGCCTATAAATTCACCTTTGACT 59.642 40.000 0.00 0.00 0.00 3.41
2922 3391 5.125417 TGCAGCCTATAAATTCACCTTTGAC 59.875 40.000 0.00 0.00 0.00 3.18
2923 3392 5.260424 TGCAGCCTATAAATTCACCTTTGA 58.740 37.500 0.00 0.00 0.00 2.69
2924 3393 5.581126 TGCAGCCTATAAATTCACCTTTG 57.419 39.130 0.00 0.00 0.00 2.77
2925 3394 6.014669 TGTTTGCAGCCTATAAATTCACCTTT 60.015 34.615 0.00 0.00 0.00 3.11
2926 3395 5.480073 TGTTTGCAGCCTATAAATTCACCTT 59.520 36.000 0.00 0.00 0.00 3.50
2927 3396 5.016173 TGTTTGCAGCCTATAAATTCACCT 58.984 37.500 0.00 0.00 0.00 4.00
2928 3397 5.323371 TGTTTGCAGCCTATAAATTCACC 57.677 39.130 0.00 0.00 0.00 4.02
2929 3398 7.170658 TGTTTTGTTTGCAGCCTATAAATTCAC 59.829 33.333 0.00 0.00 0.00 3.18
2930 3399 7.170658 GTGTTTTGTTTGCAGCCTATAAATTCA 59.829 33.333 0.00 0.00 0.00 2.57
2931 3400 7.384932 AGTGTTTTGTTTGCAGCCTATAAATTC 59.615 33.333 0.00 0.00 0.00 2.17
2932 3401 7.216494 AGTGTTTTGTTTGCAGCCTATAAATT 58.784 30.769 0.00 0.00 0.00 1.82
2933 3402 6.758254 AGTGTTTTGTTTGCAGCCTATAAAT 58.242 32.000 0.00 0.00 0.00 1.40
2934 3403 6.155475 AGTGTTTTGTTTGCAGCCTATAAA 57.845 33.333 0.00 0.00 0.00 1.40
2935 3404 5.782893 AGTGTTTTGTTTGCAGCCTATAA 57.217 34.783 0.00 0.00 0.00 0.98
2936 3405 5.182380 GGTAGTGTTTTGTTTGCAGCCTATA 59.818 40.000 0.00 0.00 0.00 1.31
2937 3406 4.022329 GGTAGTGTTTTGTTTGCAGCCTAT 60.022 41.667 0.00 0.00 0.00 2.57
2938 3407 3.316868 GGTAGTGTTTTGTTTGCAGCCTA 59.683 43.478 0.00 0.00 0.00 3.93
2939 3408 2.100749 GGTAGTGTTTTGTTTGCAGCCT 59.899 45.455 0.00 0.00 0.00 4.58
2940 3409 2.469826 GGTAGTGTTTTGTTTGCAGCC 58.530 47.619 0.00 0.00 0.00 4.85
2941 3410 2.116366 CGGTAGTGTTTTGTTTGCAGC 58.884 47.619 0.00 0.00 0.00 5.25
2942 3411 2.116366 GCGGTAGTGTTTTGTTTGCAG 58.884 47.619 0.00 0.00 0.00 4.41
2943 3412 1.202313 GGCGGTAGTGTTTTGTTTGCA 60.202 47.619 0.00 0.00 0.00 4.08
2944 3413 1.202313 TGGCGGTAGTGTTTTGTTTGC 60.202 47.619 0.00 0.00 0.00 3.68
2945 3414 2.853731 TGGCGGTAGTGTTTTGTTTG 57.146 45.000 0.00 0.00 0.00 2.93
2946 3415 2.952978 TCATGGCGGTAGTGTTTTGTTT 59.047 40.909 0.00 0.00 0.00 2.83
2947 3416 2.292292 GTCATGGCGGTAGTGTTTTGTT 59.708 45.455 0.00 0.00 0.00 2.83
2948 3417 1.877443 GTCATGGCGGTAGTGTTTTGT 59.123 47.619 0.00 0.00 0.00 2.83
2949 3418 1.136085 CGTCATGGCGGTAGTGTTTTG 60.136 52.381 12.98 0.00 0.00 2.44
2950 3419 1.153353 CGTCATGGCGGTAGTGTTTT 58.847 50.000 12.98 0.00 0.00 2.43
2951 3420 0.672401 CCGTCATGGCGGTAGTGTTT 60.672 55.000 30.40 0.00 46.11 2.83
2952 3421 1.079405 CCGTCATGGCGGTAGTGTT 60.079 57.895 30.40 0.00 46.11 3.32
2953 3422 2.577059 CCGTCATGGCGGTAGTGT 59.423 61.111 30.40 0.00 46.11 3.55
2962 3431 3.548014 GGAATGAATTTACGCCGTCATGG 60.548 47.826 0.00 0.00 42.50 3.66
2963 3432 3.064682 TGGAATGAATTTACGCCGTCATG 59.935 43.478 0.00 0.00 31.20 3.07
2964 3433 3.275143 TGGAATGAATTTACGCCGTCAT 58.725 40.909 0.00 0.00 32.09 3.06
2965 3434 2.675844 CTGGAATGAATTTACGCCGTCA 59.324 45.455 0.00 0.00 0.00 4.35
2966 3435 2.676342 ACTGGAATGAATTTACGCCGTC 59.324 45.455 0.00 0.00 0.00 4.79
2967 3436 2.706890 ACTGGAATGAATTTACGCCGT 58.293 42.857 0.00 0.00 0.00 5.68
2968 3437 3.126171 TCAACTGGAATGAATTTACGCCG 59.874 43.478 0.00 0.00 0.00 6.46
2969 3438 4.438744 CCTCAACTGGAATGAATTTACGCC 60.439 45.833 0.00 0.00 0.00 5.68
2970 3439 4.662145 CCTCAACTGGAATGAATTTACGC 58.338 43.478 0.00 0.00 0.00 4.42
2971 3440 4.155826 TGCCTCAACTGGAATGAATTTACG 59.844 41.667 0.00 0.00 0.00 3.18
2972 3441 5.643379 TGCCTCAACTGGAATGAATTTAC 57.357 39.130 0.00 0.00 0.00 2.01
2973 3442 6.009589 TCTTGCCTCAACTGGAATGAATTTA 58.990 36.000 0.00 0.00 0.00 1.40
2974 3443 4.834496 TCTTGCCTCAACTGGAATGAATTT 59.166 37.500 0.00 0.00 0.00 1.82
2975 3444 4.219288 GTCTTGCCTCAACTGGAATGAATT 59.781 41.667 0.00 0.00 0.00 2.17
2976 3445 3.760684 GTCTTGCCTCAACTGGAATGAAT 59.239 43.478 0.00 0.00 0.00 2.57
2977 3446 3.149196 GTCTTGCCTCAACTGGAATGAA 58.851 45.455 0.00 0.00 0.00 2.57
2978 3447 2.553028 GGTCTTGCCTCAACTGGAATGA 60.553 50.000 0.00 0.00 0.00 2.57
2979 3448 1.815003 GGTCTTGCCTCAACTGGAATG 59.185 52.381 0.00 0.00 0.00 2.67
2980 3449 1.425066 TGGTCTTGCCTCAACTGGAAT 59.575 47.619 0.00 0.00 38.35 3.01
2981 3450 0.843309 TGGTCTTGCCTCAACTGGAA 59.157 50.000 0.00 0.00 38.35 3.53
2982 3451 1.003580 GATGGTCTTGCCTCAACTGGA 59.996 52.381 0.00 0.00 38.35 3.86
2983 3452 1.271543 TGATGGTCTTGCCTCAACTGG 60.272 52.381 0.00 0.00 38.35 4.00
2984 3453 2.189594 TGATGGTCTTGCCTCAACTG 57.810 50.000 0.00 0.00 38.35 3.16
2985 3454 2.356535 GGATGATGGTCTTGCCTCAACT 60.357 50.000 0.00 0.00 38.35 3.16
2986 3455 2.019984 GGATGATGGTCTTGCCTCAAC 58.980 52.381 0.00 0.00 38.35 3.18
2987 3456 1.634973 TGGATGATGGTCTTGCCTCAA 59.365 47.619 0.00 0.00 38.35 3.02
2988 3457 1.211212 CTGGATGATGGTCTTGCCTCA 59.789 52.381 0.00 0.00 38.35 3.86
2989 3458 1.476471 CCTGGATGATGGTCTTGCCTC 60.476 57.143 0.00 0.00 38.35 4.70
2990 3459 0.549950 CCTGGATGATGGTCTTGCCT 59.450 55.000 0.00 0.00 38.35 4.75
2991 3460 1.105759 GCCTGGATGATGGTCTTGCC 61.106 60.000 0.00 0.00 37.90 4.52
2992 3461 0.394762 TGCCTGGATGATGGTCTTGC 60.395 55.000 0.00 0.00 0.00 4.01
2993 3462 2.133281 TTGCCTGGATGATGGTCTTG 57.867 50.000 0.00 0.00 0.00 3.02
2994 3463 3.181436 CCTATTGCCTGGATGATGGTCTT 60.181 47.826 0.00 0.00 0.00 3.01
2995 3464 2.374504 CCTATTGCCTGGATGATGGTCT 59.625 50.000 0.00 0.00 0.00 3.85
2996 3465 2.553904 CCCTATTGCCTGGATGATGGTC 60.554 54.545 0.00 0.00 0.00 4.02
2997 3466 1.426598 CCCTATTGCCTGGATGATGGT 59.573 52.381 0.00 0.00 0.00 3.55
2998 3467 1.272313 CCCCTATTGCCTGGATGATGG 60.272 57.143 0.00 0.00 0.00 3.51
2999 3468 1.889699 GCCCCTATTGCCTGGATGATG 60.890 57.143 0.00 0.00 0.00 3.07
3000 3469 0.407139 GCCCCTATTGCCTGGATGAT 59.593 55.000 0.00 0.00 0.00 2.45
3001 3470 1.719063 GGCCCCTATTGCCTGGATGA 61.719 60.000 0.00 0.00 45.70 2.92
3002 3471 1.228675 GGCCCCTATTGCCTGGATG 60.229 63.158 0.00 0.00 45.70 3.51
3003 3472 3.265601 GGCCCCTATTGCCTGGAT 58.734 61.111 0.00 0.00 45.70 3.41
3009 3478 1.531602 GGTGGATGGCCCCTATTGC 60.532 63.158 0.00 0.00 0.00 3.56
3010 3479 1.228245 CGGTGGATGGCCCCTATTG 60.228 63.158 0.00 0.00 0.00 1.90
3011 3480 1.385347 TCGGTGGATGGCCCCTATT 60.385 57.895 0.00 0.00 0.00 1.73
3012 3481 2.147387 GTCGGTGGATGGCCCCTAT 61.147 63.158 0.00 0.00 0.00 2.57
3013 3482 2.766651 GTCGGTGGATGGCCCCTA 60.767 66.667 0.00 0.00 0.00 3.53
3015 3484 3.358932 ATTGTCGGTGGATGGCCCC 62.359 63.158 0.00 0.00 0.00 5.80
3016 3485 2.120909 CATTGTCGGTGGATGGCCC 61.121 63.158 0.00 0.00 0.00 5.80
3017 3486 2.774799 GCATTGTCGGTGGATGGCC 61.775 63.158 0.00 0.00 0.00 5.36
3018 3487 1.594194 TTGCATTGTCGGTGGATGGC 61.594 55.000 0.00 0.00 0.00 4.40
3019 3488 0.171007 GTTGCATTGTCGGTGGATGG 59.829 55.000 0.00 0.00 0.00 3.51
3020 3489 0.171007 GGTTGCATTGTCGGTGGATG 59.829 55.000 0.00 0.00 0.00 3.51
3021 3490 0.038166 AGGTTGCATTGTCGGTGGAT 59.962 50.000 0.00 0.00 0.00 3.41
3022 3491 0.179004 AAGGTTGCATTGTCGGTGGA 60.179 50.000 0.00 0.00 0.00 4.02
3023 3492 0.039256 CAAGGTTGCATTGTCGGTGG 60.039 55.000 0.00 0.00 0.00 4.61
3024 3493 0.667993 ACAAGGTTGCATTGTCGGTG 59.332 50.000 0.00 0.00 36.10 4.94
3025 3494 0.951558 GACAAGGTTGCATTGTCGGT 59.048 50.000 14.14 0.00 44.94 4.69
3026 3495 3.773117 GACAAGGTTGCATTGTCGG 57.227 52.632 14.14 0.00 44.94 4.79
3029 3498 2.607771 GCGATTGACAAGGTTGCATTGT 60.608 45.455 3.87 3.87 43.38 2.71
3030 3499 1.987770 GCGATTGACAAGGTTGCATTG 59.012 47.619 0.00 0.00 0.00 2.82
3031 3500 1.067635 GGCGATTGACAAGGTTGCATT 60.068 47.619 3.93 0.00 0.00 3.56
3032 3501 0.527565 GGCGATTGACAAGGTTGCAT 59.472 50.000 3.93 0.00 0.00 3.96
3033 3502 1.851021 CGGCGATTGACAAGGTTGCA 61.851 55.000 0.00 0.00 0.00 4.08
3034 3503 1.154225 CGGCGATTGACAAGGTTGC 60.154 57.895 0.00 0.00 0.00 4.17
3035 3504 0.953471 TCCGGCGATTGACAAGGTTG 60.953 55.000 9.30 0.00 0.00 3.77
3036 3505 0.673644 CTCCGGCGATTGACAAGGTT 60.674 55.000 9.30 0.00 0.00 3.50
3037 3506 1.079127 CTCCGGCGATTGACAAGGT 60.079 57.895 9.30 0.00 0.00 3.50
3038 3507 2.464459 GCTCCGGCGATTGACAAGG 61.464 63.158 9.30 0.00 0.00 3.61
3039 3508 1.699656 CTGCTCCGGCGATTGACAAG 61.700 60.000 9.30 0.00 42.25 3.16
3040 3509 1.741401 CTGCTCCGGCGATTGACAA 60.741 57.895 9.30 0.00 42.25 3.18
3041 3510 2.125552 CTGCTCCGGCGATTGACA 60.126 61.111 9.30 0.00 42.25 3.58
3042 3511 2.892425 CCTGCTCCGGCGATTGAC 60.892 66.667 9.30 0.00 42.25 3.18
3043 3512 4.838152 GCCTGCTCCGGCGATTGA 62.838 66.667 9.30 0.00 40.79 2.57
3052 3521 4.767255 CAGTCCGTGGCCTGCTCC 62.767 72.222 3.32 0.00 0.00 4.70
3053 3522 4.767255 CCAGTCCGTGGCCTGCTC 62.767 72.222 3.32 0.00 40.39 4.26
3068 3537 1.069513 CAGAAGTACCGTGGTTGACCA 59.930 52.381 0.00 0.00 45.30 4.02
3069 3538 1.069668 ACAGAAGTACCGTGGTTGACC 59.930 52.381 0.00 0.00 0.00 4.02
3070 3539 2.521105 ACAGAAGTACCGTGGTTGAC 57.479 50.000 0.00 0.00 0.00 3.18
3071 3540 2.559668 CCTACAGAAGTACCGTGGTTGA 59.440 50.000 0.00 0.00 0.00 3.18
3072 3541 2.929592 GCCTACAGAAGTACCGTGGTTG 60.930 54.545 0.00 0.00 0.00 3.77
3073 3542 1.274447 GCCTACAGAAGTACCGTGGTT 59.726 52.381 0.00 0.00 0.00 3.67
3074 3543 0.893447 GCCTACAGAAGTACCGTGGT 59.107 55.000 0.00 0.00 0.00 4.16
3075 3544 0.892755 TGCCTACAGAAGTACCGTGG 59.107 55.000 0.00 0.00 0.00 4.94
3076 3545 2.165641 TGATGCCTACAGAAGTACCGTG 59.834 50.000 0.00 0.00 0.00 4.94
3077 3546 2.453521 TGATGCCTACAGAAGTACCGT 58.546 47.619 0.00 0.00 0.00 4.83
3078 3547 3.643763 GATGATGCCTACAGAAGTACCG 58.356 50.000 0.00 0.00 0.00 4.02
3079 3548 3.068307 ACGATGATGCCTACAGAAGTACC 59.932 47.826 0.00 0.00 0.00 3.34
3080 3549 4.291783 GACGATGATGCCTACAGAAGTAC 58.708 47.826 0.00 0.00 0.00 2.73
3081 3550 3.318275 GGACGATGATGCCTACAGAAGTA 59.682 47.826 0.00 0.00 0.00 2.24
3082 3551 2.101582 GGACGATGATGCCTACAGAAGT 59.898 50.000 0.00 0.00 0.00 3.01
3083 3552 2.546795 GGGACGATGATGCCTACAGAAG 60.547 54.545 0.00 0.00 0.00 2.85
3084 3553 1.412710 GGGACGATGATGCCTACAGAA 59.587 52.381 0.00 0.00 0.00 3.02
3085 3554 1.040646 GGGACGATGATGCCTACAGA 58.959 55.000 0.00 0.00 0.00 3.41
3086 3555 0.752658 TGGGACGATGATGCCTACAG 59.247 55.000 0.00 0.00 0.00 2.74
3087 3556 1.134521 GTTGGGACGATGATGCCTACA 60.135 52.381 0.00 0.00 36.18 2.74
3088 3557 1.134521 TGTTGGGACGATGATGCCTAC 60.135 52.381 0.00 0.00 36.57 3.18
3089 3558 1.199615 TGTTGGGACGATGATGCCTA 58.800 50.000 0.00 0.00 0.00 3.93
3090 3559 0.548031 ATGTTGGGACGATGATGCCT 59.452 50.000 0.00 0.00 0.00 4.75
3091 3560 0.947244 GATGTTGGGACGATGATGCC 59.053 55.000 0.00 0.00 0.00 4.40
3092 3561 1.667236 TGATGTTGGGACGATGATGC 58.333 50.000 0.00 0.00 0.00 3.91
3093 3562 2.355756 GGTTGATGTTGGGACGATGATG 59.644 50.000 0.00 0.00 0.00 3.07
3094 3563 2.643551 GGTTGATGTTGGGACGATGAT 58.356 47.619 0.00 0.00 0.00 2.45
3095 3564 1.674519 CGGTTGATGTTGGGACGATGA 60.675 52.381 0.00 0.00 0.00 2.92
3096 3565 0.726827 CGGTTGATGTTGGGACGATG 59.273 55.000 0.00 0.00 0.00 3.84
3097 3566 0.392461 CCGGTTGATGTTGGGACGAT 60.392 55.000 0.00 0.00 0.00 3.73
3098 3567 1.004320 CCGGTTGATGTTGGGACGA 60.004 57.895 0.00 0.00 0.00 4.20
3099 3568 2.686816 GCCGGTTGATGTTGGGACG 61.687 63.158 1.90 0.00 0.00 4.79
3100 3569 2.686816 CGCCGGTTGATGTTGGGAC 61.687 63.158 1.90 0.00 0.00 4.46
3101 3570 2.359354 CGCCGGTTGATGTTGGGA 60.359 61.111 1.90 0.00 0.00 4.37
3102 3571 2.359354 TCGCCGGTTGATGTTGGG 60.359 61.111 1.90 0.00 0.00 4.12
3103 3572 1.305219 ATGTCGCCGGTTGATGTTGG 61.305 55.000 1.90 0.00 0.00 3.77
3104 3573 0.521291 AATGTCGCCGGTTGATGTTG 59.479 50.000 1.90 0.00 0.00 3.33
3105 3574 1.243902 AAATGTCGCCGGTTGATGTT 58.756 45.000 1.90 0.00 0.00 2.71
3106 3575 1.068610 CAAAATGTCGCCGGTTGATGT 60.069 47.619 1.90 0.00 0.00 3.06
3107 3576 1.616620 CAAAATGTCGCCGGTTGATG 58.383 50.000 1.90 0.00 0.00 3.07
3108 3577 0.109319 GCAAAATGTCGCCGGTTGAT 60.109 50.000 1.90 0.00 0.00 2.57
3109 3578 1.284408 GCAAAATGTCGCCGGTTGA 59.716 52.632 1.90 0.00 0.00 3.18
3110 3579 1.732683 GGCAAAATGTCGCCGGTTG 60.733 57.895 1.90 0.00 38.82 3.77
3111 3580 2.648454 GGCAAAATGTCGCCGGTT 59.352 55.556 1.90 0.00 38.82 4.44
3116 3585 3.502191 TGATAAAGGGCAAAATGTCGC 57.498 42.857 0.00 0.00 0.00 5.19
3117 3586 5.297776 AGAGATGATAAAGGGCAAAATGTCG 59.702 40.000 0.00 0.00 0.00 4.35
3118 3587 6.705863 AGAGATGATAAAGGGCAAAATGTC 57.294 37.500 0.00 0.00 0.00 3.06
3119 3588 7.284034 CAGTAGAGATGATAAAGGGCAAAATGT 59.716 37.037 0.00 0.00 0.00 2.71
3120 3589 7.284034 ACAGTAGAGATGATAAAGGGCAAAATG 59.716 37.037 0.00 0.00 0.00 2.32
3121 3590 7.349598 ACAGTAGAGATGATAAAGGGCAAAAT 58.650 34.615 0.00 0.00 0.00 1.82
3122 3591 6.721318 ACAGTAGAGATGATAAAGGGCAAAA 58.279 36.000 0.00 0.00 0.00 2.44
3123 3592 6.313519 ACAGTAGAGATGATAAAGGGCAAA 57.686 37.500 0.00 0.00 0.00 3.68
3124 3593 5.957771 ACAGTAGAGATGATAAAGGGCAA 57.042 39.130 0.00 0.00 0.00 4.52
3125 3594 5.425217 TCAACAGTAGAGATGATAAAGGGCA 59.575 40.000 0.00 0.00 0.00 5.36
3126 3595 5.755861 GTCAACAGTAGAGATGATAAAGGGC 59.244 44.000 0.00 0.00 0.00 5.19
3127 3596 6.098982 AGGTCAACAGTAGAGATGATAAAGGG 59.901 42.308 0.00 0.00 0.00 3.95
3128 3597 7.118496 AGGTCAACAGTAGAGATGATAAAGG 57.882 40.000 0.00 0.00 0.00 3.11
3129 3598 7.776107 TGAGGTCAACAGTAGAGATGATAAAG 58.224 38.462 0.00 0.00 0.00 1.85
3130 3599 7.718334 TGAGGTCAACAGTAGAGATGATAAA 57.282 36.000 0.00 0.00 0.00 1.40
3131 3600 7.255277 CGATGAGGTCAACAGTAGAGATGATAA 60.255 40.741 0.00 0.00 0.00 1.75
3132 3601 6.205658 CGATGAGGTCAACAGTAGAGATGATA 59.794 42.308 0.00 0.00 0.00 2.15
3133 3602 5.009510 CGATGAGGTCAACAGTAGAGATGAT 59.990 44.000 0.00 0.00 0.00 2.45
3134 3603 4.336713 CGATGAGGTCAACAGTAGAGATGA 59.663 45.833 0.00 0.00 0.00 2.92
3135 3604 4.336713 TCGATGAGGTCAACAGTAGAGATG 59.663 45.833 0.00 0.00 0.00 2.90
3136 3605 4.336993 GTCGATGAGGTCAACAGTAGAGAT 59.663 45.833 0.00 0.00 0.00 2.75
3137 3606 3.690139 GTCGATGAGGTCAACAGTAGAGA 59.310 47.826 0.00 0.00 0.00 3.10
3138 3607 3.440522 TGTCGATGAGGTCAACAGTAGAG 59.559 47.826 0.00 0.00 0.00 2.43
3139 3608 3.190744 GTGTCGATGAGGTCAACAGTAGA 59.809 47.826 0.00 0.00 0.00 2.59
3140 3609 3.057526 TGTGTCGATGAGGTCAACAGTAG 60.058 47.826 0.00 0.00 0.00 2.57
3141 3610 2.888414 TGTGTCGATGAGGTCAACAGTA 59.112 45.455 0.00 0.00 0.00 2.74
3142 3611 1.686587 TGTGTCGATGAGGTCAACAGT 59.313 47.619 0.00 0.00 0.00 3.55
3143 3612 2.438868 TGTGTCGATGAGGTCAACAG 57.561 50.000 0.00 0.00 0.00 3.16
3144 3613 4.529109 TTATGTGTCGATGAGGTCAACA 57.471 40.909 0.00 0.00 0.00 3.33
3145 3614 6.422776 AATTTATGTGTCGATGAGGTCAAC 57.577 37.500 0.00 0.00 0.00 3.18
3146 3615 7.390440 AGAAAATTTATGTGTCGATGAGGTCAA 59.610 33.333 0.00 0.00 0.00 3.18
3147 3616 6.878923 AGAAAATTTATGTGTCGATGAGGTCA 59.121 34.615 0.00 0.00 0.00 4.02
3148 3617 7.308782 AGAAAATTTATGTGTCGATGAGGTC 57.691 36.000 0.00 0.00 0.00 3.85
3149 3618 7.687941 AAGAAAATTTATGTGTCGATGAGGT 57.312 32.000 0.00 0.00 0.00 3.85
3150 3619 8.236586 TGAAAGAAAATTTATGTGTCGATGAGG 58.763 33.333 0.00 0.00 0.00 3.86
3151 3620 9.270576 CTGAAAGAAAATTTATGTGTCGATGAG 57.729 33.333 0.00 0.00 34.07 2.90
3152 3621 8.783093 ACTGAAAGAAAATTTATGTGTCGATGA 58.217 29.630 0.00 0.00 37.43 2.92
3153 3622 8.955061 ACTGAAAGAAAATTTATGTGTCGATG 57.045 30.769 0.00 0.00 37.43 3.84
3169 3638 9.392259 TCTCGTTATCTACTGATACTGAAAGAA 57.608 33.333 0.00 0.00 35.14 2.52
3170 3639 8.959705 TCTCGTTATCTACTGATACTGAAAGA 57.040 34.615 0.00 0.00 35.14 2.52
3171 3640 8.832521 ACTCTCGTTATCTACTGATACTGAAAG 58.167 37.037 0.00 0.00 35.14 2.62
3172 3641 8.734218 ACTCTCGTTATCTACTGATACTGAAA 57.266 34.615 0.00 0.00 35.14 2.69
3173 3642 8.734218 AACTCTCGTTATCTACTGATACTGAA 57.266 34.615 0.00 0.00 35.14 3.02
3174 3643 8.613482 CAAACTCTCGTTATCTACTGATACTGA 58.387 37.037 0.00 0.00 35.14 3.41
3175 3644 8.399425 ACAAACTCTCGTTATCTACTGATACTG 58.601 37.037 0.00 0.00 35.14 2.74
3176 3645 8.508883 ACAAACTCTCGTTATCTACTGATACT 57.491 34.615 0.00 0.00 35.14 2.12
3177 3646 9.011407 CAACAAACTCTCGTTATCTACTGATAC 57.989 37.037 0.00 0.00 35.14 2.24
3178 3647 8.188799 CCAACAAACTCTCGTTATCTACTGATA 58.811 37.037 0.00 0.00 34.32 2.15
3179 3648 7.036220 CCAACAAACTCTCGTTATCTACTGAT 58.964 38.462 0.00 0.00 36.74 2.90
3180 3649 6.387465 CCAACAAACTCTCGTTATCTACTGA 58.613 40.000 0.00 0.00 31.86 3.41
3181 3650 5.577164 CCCAACAAACTCTCGTTATCTACTG 59.423 44.000 0.00 0.00 31.86 2.74
3182 3651 5.721232 CCCAACAAACTCTCGTTATCTACT 58.279 41.667 0.00 0.00 31.86 2.57
3183 3652 4.329256 GCCCAACAAACTCTCGTTATCTAC 59.671 45.833 0.00 0.00 31.86 2.59
3184 3653 4.501071 GCCCAACAAACTCTCGTTATCTA 58.499 43.478 0.00 0.00 31.86 1.98
3185 3654 3.335579 GCCCAACAAACTCTCGTTATCT 58.664 45.455 0.00 0.00 31.86 1.98
3186 3655 2.418976 GGCCCAACAAACTCTCGTTATC 59.581 50.000 0.00 0.00 31.86 1.75
3187 3656 2.224670 TGGCCCAACAAACTCTCGTTAT 60.225 45.455 0.00 0.00 31.86 1.89
3188 3657 1.141254 TGGCCCAACAAACTCTCGTTA 59.859 47.619 0.00 0.00 31.86 3.18
3189 3658 0.106918 TGGCCCAACAAACTCTCGTT 60.107 50.000 0.00 0.00 34.03 3.85
3190 3659 1.529796 TGGCCCAACAAACTCTCGT 59.470 52.632 0.00 0.00 0.00 4.18
3191 3660 4.473643 TGGCCCAACAAACTCTCG 57.526 55.556 0.00 0.00 0.00 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.