Multiple sequence alignment - TraesCS6B01G344500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G344500 chr6B 100.000 3947 0 0 1 3947 606961236 606965182 0.000000e+00 7289.0
1 TraesCS6B01G344500 chr6B 86.842 380 40 7 3507 3880 439391920 439392295 2.190000e-112 416.0
2 TraesCS6B01G344500 chr6D 93.608 1189 44 10 2350 3516 404593406 404594584 0.000000e+00 1746.0
3 TraesCS6B01G344500 chr6D 85.920 902 39 24 644 1504 404592011 404592865 0.000000e+00 881.0
4 TraesCS6B01G344500 chr6D 90.359 529 29 13 1632 2156 404592861 404593371 0.000000e+00 675.0
5 TraesCS6B01G344500 chr6D 97.101 69 2 0 3357 3425 72021729 72021797 2.490000e-22 117.0
6 TraesCS6B01G344500 chr6D 97.101 69 2 0 3357 3425 72021808 72021740 2.490000e-22 117.0
7 TraesCS6B01G344500 chr6D 91.139 79 3 1 3356 3430 464768222 464768300 1.940000e-18 104.0
8 TraesCS6B01G344500 chr6D 97.297 37 1 0 3911 3947 404594752 404594788 3.290000e-06 63.9
9 TraesCS6B01G344500 chr6A 92.326 1251 54 17 1632 2845 551087677 551088922 0.000000e+00 1740.0
10 TraesCS6B01G344500 chr6A 89.588 874 37 23 644 1504 551086849 551087681 0.000000e+00 1061.0
11 TraesCS6B01G344500 chr6A 91.189 681 31 8 2848 3516 551089280 551089943 0.000000e+00 898.0
12 TraesCS6B01G344500 chr6A 93.421 76 3 2 3350 3425 88767583 88767656 1.160000e-20 111.0
13 TraesCS6B01G344500 chr6A 95.652 69 3 0 3357 3425 88767667 88767599 1.160000e-20 111.0
14 TraesCS6B01G344500 chr6A 100.000 37 0 0 3911 3947 551090115 551090151 7.080000e-08 69.4
15 TraesCS6B01G344500 chr4B 93.038 632 43 1 2 632 613758863 613758232 0.000000e+00 922.0
16 TraesCS6B01G344500 chr5B 92.880 632 44 1 1 631 146836631 146836000 0.000000e+00 917.0
17 TraesCS6B01G344500 chr5B 92.429 634 46 2 1 633 14242687 14243319 0.000000e+00 904.0
18 TraesCS6B01G344500 chr5B 95.775 142 6 0 1493 1634 41083504 41083645 3.070000e-56 230.0
19 TraesCS6B01G344500 chr2B 92.236 644 47 3 1 642 722515148 722514506 0.000000e+00 909.0
20 TraesCS6B01G344500 chr2B 99.259 135 0 1 1502 1635 435535454 435535588 3.940000e-60 243.0
21 TraesCS6B01G344500 chr2B 98.529 136 1 1 1502 1636 395978872 395978737 5.100000e-59 239.0
22 TraesCS6B01G344500 chr3B 92.283 635 47 2 1 634 1086912 1086279 0.000000e+00 900.0
23 TraesCS6B01G344500 chr3B 90.852 634 57 1 1 633 166540331 166539698 0.000000e+00 848.0
24 TraesCS6B01G344500 chr3B 89.907 644 55 7 1 635 17147898 17147256 0.000000e+00 821.0
25 TraesCS6B01G344500 chr3B 98.519 135 2 0 1500 1634 786504721 786504587 5.100000e-59 239.0
26 TraesCS6B01G344500 chr1B 90.505 653 49 6 1 644 439482482 439481834 0.000000e+00 850.0
27 TraesCS6B01G344500 chr7B 89.724 652 55 9 7 652 604698736 604698091 0.000000e+00 822.0
28 TraesCS6B01G344500 chr4D 89.017 346 28 8 3507 3848 489241225 489241564 1.700000e-113 420.0
29 TraesCS6B01G344500 chr4D 87.390 341 37 5 3507 3844 425976221 425976558 1.720000e-103 387.0
30 TraesCS6B01G344500 chr3D 86.146 397 36 8 3507 3888 580987692 580987300 1.020000e-110 411.0
31 TraesCS6B01G344500 chr7D 87.791 344 35 6 3507 3846 82854281 82854621 2.860000e-106 396.0
32 TraesCS6B01G344500 chr7D 87.059 340 39 5 3510 3846 563714239 563714576 2.880000e-101 379.0
33 TraesCS6B01G344500 chr7D 90.698 86 6 1 3357 3440 351567800 351567885 3.220000e-21 113.0
34 TraesCS6B01G344500 chr5A 85.052 388 48 8 3507 3888 64372852 64373235 1.720000e-103 387.0
35 TraesCS6B01G344500 chr5A 86.765 340 36 8 3507 3841 351611804 351612139 1.730000e-98 370.0
36 TraesCS6B01G344500 chr5A 95.556 135 6 0 1500 1634 549165267 549165401 2.390000e-52 217.0
37 TraesCS6B01G344500 chr7A 86.957 345 39 6 3507 3848 510156938 510156597 2.230000e-102 383.0
38 TraesCS6B01G344500 chr7A 95.620 137 6 0 1500 1636 18742554 18742418 1.850000e-53 220.0
39 TraesCS6B01G344500 chr7A 95.556 135 6 0 1502 1636 89604400 89604534 2.390000e-52 217.0
40 TraesCS6B01G344500 chr7A 91.860 86 5 1 3357 3440 398912531 398912616 6.930000e-23 119.0
41 TraesCS6B01G344500 chr1A 95.804 143 5 1 1493 1634 532534868 532534726 3.070000e-56 230.0
42 TraesCS6B01G344500 chr5D 96.350 137 3 2 1500 1635 104074924 104074789 1.430000e-54 224.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G344500 chr6B 606961236 606965182 3946 False 7289.000 7289 100.00000 1 3947 1 chr6B.!!$F2 3946
1 TraesCS6B01G344500 chr6D 404592011 404594788 2777 False 841.475 1746 91.79600 644 3947 4 chr6D.!!$F3 3303
2 TraesCS6B01G344500 chr6A 551086849 551090151 3302 False 942.100 1740 93.27575 644 3947 4 chr6A.!!$F2 3303
3 TraesCS6B01G344500 chr4B 613758232 613758863 631 True 922.000 922 93.03800 2 632 1 chr4B.!!$R1 630
4 TraesCS6B01G344500 chr5B 146836000 146836631 631 True 917.000 917 92.88000 1 631 1 chr5B.!!$R1 630
5 TraesCS6B01G344500 chr5B 14242687 14243319 632 False 904.000 904 92.42900 1 633 1 chr5B.!!$F1 632
6 TraesCS6B01G344500 chr2B 722514506 722515148 642 True 909.000 909 92.23600 1 642 1 chr2B.!!$R2 641
7 TraesCS6B01G344500 chr3B 1086279 1086912 633 True 900.000 900 92.28300 1 634 1 chr3B.!!$R1 633
8 TraesCS6B01G344500 chr3B 166539698 166540331 633 True 848.000 848 90.85200 1 633 1 chr3B.!!$R3 632
9 TraesCS6B01G344500 chr3B 17147256 17147898 642 True 821.000 821 89.90700 1 635 1 chr3B.!!$R2 634
10 TraesCS6B01G344500 chr1B 439481834 439482482 648 True 850.000 850 90.50500 1 644 1 chr1B.!!$R1 643
11 TraesCS6B01G344500 chr7B 604698091 604698736 645 True 822.000 822 89.72400 7 652 1 chr7B.!!$R1 645

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
448 471 0.251033 TCGAAAGGAGGTCAGGACGA 60.251 55.0 0.00 0.0 0.00 4.20 F
1370 1434 0.029567 GGTCGAGCTACATCCGTCTG 59.970 60.0 7.51 0.0 0.00 3.51 F
1459 1530 0.249120 ATCCTGTGACGGAAATCGCA 59.751 50.0 0.00 0.0 43.89 5.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1620 1691 0.442699 GTTTCCTTAGGCTGCGTTCG 59.557 55.000 0.00 0.0 0.00 3.95 R
2616 2732 1.063166 GCTAAAGCAGATGCACCGC 59.937 57.895 7.68 0.0 45.16 5.68 R
2960 3435 1.132643 ACATAGACGCGGACTCTTGTC 59.867 52.381 12.47 0.0 42.22 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 77 5.821470 AGCTTAACTCTAGCGTAGTACATGA 59.179 40.000 0.00 0.00 43.37 3.07
200 205 4.472286 CGTCTTCGTTGGTAAATTTGCAT 58.528 39.130 8.59 0.00 0.00 3.96
275 291 2.233186 ACCTACTTTTAGCTGGTCGTCC 59.767 50.000 0.00 0.00 0.00 4.79
342 365 1.686325 GAAGGCCCTACGGATCTGCA 61.686 60.000 0.00 0.00 0.00 4.41
343 366 1.056700 AAGGCCCTACGGATCTGCAT 61.057 55.000 0.00 0.00 0.00 3.96
391 414 1.461091 GCGATGGAGGTACGGGATCA 61.461 60.000 0.00 0.00 0.00 2.92
405 428 1.573108 GGATCAAGAGGTGGGAGACA 58.427 55.000 0.00 0.00 0.00 3.41
440 463 0.252742 ACTGGGGATCGAAAGGAGGT 60.253 55.000 0.00 0.00 0.00 3.85
448 471 0.251033 TCGAAAGGAGGTCAGGACGA 60.251 55.000 0.00 0.00 0.00 4.20
490 513 4.309950 GTCTGGCCCGGACGTGTT 62.310 66.667 7.02 0.00 29.77 3.32
514 537 1.378646 TTTTGCCACACACCGGACA 60.379 52.632 9.46 0.00 0.00 4.02
606 630 0.393808 GGCACAACCACCCGATACAT 60.394 55.000 0.00 0.00 38.86 2.29
657 681 1.683943 ATATGACACACCATGCTGCC 58.316 50.000 0.00 0.00 0.00 4.85
659 683 0.679002 ATGACACACCATGCTGCCTC 60.679 55.000 0.00 0.00 0.00 4.70
675 699 1.677217 GCCTCGGATATGGGCTCAATC 60.677 57.143 0.00 0.00 42.31 2.67
700 730 1.299541 GGGTGATGACTTGTATGCCG 58.700 55.000 0.00 0.00 0.00 5.69
771 801 3.434984 GTGTCAAATTCTGCTCCAGTCTC 59.565 47.826 0.00 0.00 32.61 3.36
772 802 3.326006 TGTCAAATTCTGCTCCAGTCTCT 59.674 43.478 0.00 0.00 32.61 3.10
775 805 1.494960 ATTCTGCTCCAGTCTCTCCC 58.505 55.000 0.00 0.00 32.61 4.30
787 840 1.393883 GTCTCTCCCAACGAAAATCGC 59.606 52.381 0.00 0.00 45.12 4.58
788 841 1.001520 TCTCTCCCAACGAAAATCGCA 59.998 47.619 0.00 0.00 45.12 5.10
808 865 3.001939 GCAAGGAGACGACGAAAAGAAAA 59.998 43.478 0.00 0.00 0.00 2.29
809 866 4.515432 CAAGGAGACGACGAAAAGAAAAC 58.485 43.478 0.00 0.00 0.00 2.43
915 972 1.675007 AGGAAGGAAGGAAGGAAGGG 58.325 55.000 0.00 0.00 0.00 3.95
940 997 4.778143 AATCCACACCCGCGAGCC 62.778 66.667 8.23 0.00 0.00 4.70
960 1017 4.830765 CGCGGCGAAGGGAATCCA 62.831 66.667 19.16 0.00 34.83 3.41
961 1018 3.202706 GCGGCGAAGGGAATCCAC 61.203 66.667 12.98 0.00 34.83 4.02
962 1019 2.267642 CGGCGAAGGGAATCCACA 59.732 61.111 0.00 0.00 34.83 4.17
1106 1166 1.299648 CCAAGGTGAGGAATCGCCA 59.700 57.895 10.26 0.00 42.44 5.69
1139 1199 2.676471 ATCCGCCGGCTTGCTTTT 60.676 55.556 26.68 0.00 0.00 2.27
1216 1280 0.470456 ATTAGGGGGCGGATCGTGTA 60.470 55.000 0.00 0.00 0.00 2.90
1256 1320 3.561725 GGCAATCGAGTCCCTATTCTTTG 59.438 47.826 0.00 0.00 0.00 2.77
1267 1331 6.443849 AGTCCCTATTCTTTGTCTGTTGGATA 59.556 38.462 0.00 0.00 0.00 2.59
1269 1333 7.610305 GTCCCTATTCTTTGTCTGTTGGATAAA 59.390 37.037 0.00 0.00 34.64 1.40
1370 1434 0.029567 GGTCGAGCTACATCCGTCTG 59.970 60.000 7.51 0.00 0.00 3.51
1386 1450 2.280797 TGGCGCTGGTCAGTGTTC 60.281 61.111 7.64 6.70 40.84 3.18
1394 1458 1.303317 GGTCAGTGTTCGCCCCATT 60.303 57.895 0.00 0.00 0.00 3.16
1399 1463 0.690762 AGTGTTCGCCCCATTACACT 59.309 50.000 0.00 0.00 44.57 3.55
1401 1465 2.303600 AGTGTTCGCCCCATTACACTAA 59.696 45.455 5.04 0.00 46.72 2.24
1421 1492 7.112779 CACTAATCTACATGTTTTCCCCTTCT 58.887 38.462 2.30 0.00 0.00 2.85
1446 1517 0.670546 CGTGCGGTCTGAAATCCTGT 60.671 55.000 0.00 0.00 0.00 4.00
1459 1530 0.249120 ATCCTGTGACGGAAATCGCA 59.751 50.000 0.00 0.00 43.89 5.10
1464 1535 0.935196 GTGACGGAAATCGCATACCC 59.065 55.000 0.00 0.00 43.89 3.69
1504 1575 7.764443 TGTCAGTAGTTACAATCTCAATAAGGC 59.236 37.037 0.00 0.00 0.00 4.35
1505 1576 7.982354 GTCAGTAGTTACAATCTCAATAAGGCT 59.018 37.037 0.00 0.00 0.00 4.58
1506 1577 8.540388 TCAGTAGTTACAATCTCAATAAGGCTT 58.460 33.333 4.58 4.58 0.00 4.35
1507 1578 9.167311 CAGTAGTTACAATCTCAATAAGGCTTT 57.833 33.333 4.45 0.00 0.00 3.51
1508 1579 9.167311 AGTAGTTACAATCTCAATAAGGCTTTG 57.833 33.333 4.45 0.00 0.00 2.77
1509 1580 8.947115 GTAGTTACAATCTCAATAAGGCTTTGT 58.053 33.333 4.45 3.47 31.98 2.83
1510 1581 8.409358 AGTTACAATCTCAATAAGGCTTTGTT 57.591 30.769 4.45 0.00 30.70 2.83
1511 1582 8.515414 AGTTACAATCTCAATAAGGCTTTGTTC 58.485 33.333 4.45 0.00 30.70 3.18
1512 1583 5.942872 ACAATCTCAATAAGGCTTTGTTCG 58.057 37.500 4.45 0.00 0.00 3.95
1513 1584 5.106157 ACAATCTCAATAAGGCTTTGTTCGG 60.106 40.000 4.45 0.00 0.00 4.30
1514 1585 4.015872 TCTCAATAAGGCTTTGTTCGGT 57.984 40.909 4.45 0.00 0.00 4.69
1515 1586 4.394729 TCTCAATAAGGCTTTGTTCGGTT 58.605 39.130 4.45 0.00 0.00 4.44
1516 1587 5.553123 TCTCAATAAGGCTTTGTTCGGTTA 58.447 37.500 4.45 0.00 0.00 2.85
1517 1588 5.410439 TCTCAATAAGGCTTTGTTCGGTTAC 59.590 40.000 4.45 0.00 0.00 2.50
1518 1589 5.064558 TCAATAAGGCTTTGTTCGGTTACA 58.935 37.500 4.45 0.00 0.00 2.41
1519 1590 5.049267 TCAATAAGGCTTTGTTCGGTTACAC 60.049 40.000 4.45 0.00 0.00 2.90
1520 1591 1.601166 AGGCTTTGTTCGGTTACACC 58.399 50.000 0.00 0.00 34.05 4.16
1521 1592 1.142262 AGGCTTTGTTCGGTTACACCT 59.858 47.619 0.00 0.00 35.66 4.00
1522 1593 1.534163 GGCTTTGTTCGGTTACACCTC 59.466 52.381 0.00 0.00 35.66 3.85
1523 1594 2.490991 GCTTTGTTCGGTTACACCTCT 58.509 47.619 0.00 0.00 35.66 3.69
1524 1595 2.876550 GCTTTGTTCGGTTACACCTCTT 59.123 45.455 0.00 0.00 35.66 2.85
1525 1596 3.059120 GCTTTGTTCGGTTACACCTCTTC 60.059 47.826 0.00 0.00 35.66 2.87
1526 1597 2.825861 TGTTCGGTTACACCTCTTCC 57.174 50.000 0.00 0.00 35.66 3.46
1527 1598 1.345415 TGTTCGGTTACACCTCTTCCC 59.655 52.381 0.00 0.00 35.66 3.97
1528 1599 1.345415 GTTCGGTTACACCTCTTCCCA 59.655 52.381 0.00 0.00 35.66 4.37
1529 1600 0.971386 TCGGTTACACCTCTTCCCAC 59.029 55.000 0.00 0.00 35.66 4.61
1530 1601 0.682852 CGGTTACACCTCTTCCCACA 59.317 55.000 0.00 0.00 35.66 4.17
1531 1602 1.337823 CGGTTACACCTCTTCCCACAG 60.338 57.143 0.00 0.00 35.66 3.66
1532 1603 1.003233 GGTTACACCTCTTCCCACAGG 59.997 57.143 0.00 0.00 34.73 4.00
1533 1604 1.003233 GTTACACCTCTTCCCACAGGG 59.997 57.143 0.00 0.00 46.11 4.45
1543 1614 3.010144 CCACAGGGATTGGAGGGG 58.990 66.667 0.00 0.00 36.02 4.79
1544 1615 1.619363 CCACAGGGATTGGAGGGGA 60.619 63.158 0.00 0.00 36.02 4.81
1545 1616 0.995675 CCACAGGGATTGGAGGGGAT 60.996 60.000 0.00 0.00 36.02 3.85
1546 1617 0.929244 CACAGGGATTGGAGGGGATT 59.071 55.000 0.00 0.00 0.00 3.01
1547 1618 1.288932 CACAGGGATTGGAGGGGATTT 59.711 52.381 0.00 0.00 0.00 2.17
1548 1619 1.288932 ACAGGGATTGGAGGGGATTTG 59.711 52.381 0.00 0.00 0.00 2.32
1549 1620 1.570501 CAGGGATTGGAGGGGATTTGA 59.429 52.381 0.00 0.00 0.00 2.69
1550 1621 1.855599 AGGGATTGGAGGGGATTTGAG 59.144 52.381 0.00 0.00 0.00 3.02
1551 1622 1.133356 GGGATTGGAGGGGATTTGAGG 60.133 57.143 0.00 0.00 0.00 3.86
1552 1623 1.133356 GGATTGGAGGGGATTTGAGGG 60.133 57.143 0.00 0.00 0.00 4.30
1553 1624 0.936691 ATTGGAGGGGATTTGAGGGG 59.063 55.000 0.00 0.00 0.00 4.79
1554 1625 1.221213 TTGGAGGGGATTTGAGGGGG 61.221 60.000 0.00 0.00 0.00 5.40
1555 1626 1.308746 GGAGGGGATTTGAGGGGGA 60.309 63.158 0.00 0.00 0.00 4.81
1556 1627 0.702706 GGAGGGGATTTGAGGGGGAT 60.703 60.000 0.00 0.00 0.00 3.85
1557 1628 1.235756 GAGGGGATTTGAGGGGGATT 58.764 55.000 0.00 0.00 0.00 3.01
1558 1629 1.575788 GAGGGGATTTGAGGGGGATTT 59.424 52.381 0.00 0.00 0.00 2.17
1559 1630 1.291939 AGGGGATTTGAGGGGGATTTG 59.708 52.381 0.00 0.00 0.00 2.32
1560 1631 1.290732 GGGGATTTGAGGGGGATTTGA 59.709 52.381 0.00 0.00 0.00 2.69
1561 1632 2.388735 GGGATTTGAGGGGGATTTGAC 58.611 52.381 0.00 0.00 0.00 3.18
1562 1633 2.023984 GGGATTTGAGGGGGATTTGACT 60.024 50.000 0.00 0.00 0.00 3.41
1563 1634 3.566553 GGGATTTGAGGGGGATTTGACTT 60.567 47.826 0.00 0.00 0.00 3.01
1564 1635 3.448660 GGATTTGAGGGGGATTTGACTTG 59.551 47.826 0.00 0.00 0.00 3.16
1565 1636 3.611025 TTTGAGGGGGATTTGACTTGT 57.389 42.857 0.00 0.00 0.00 3.16
1566 1637 4.733077 TTTGAGGGGGATTTGACTTGTA 57.267 40.909 0.00 0.00 0.00 2.41
1567 1638 4.301072 TTGAGGGGGATTTGACTTGTAG 57.699 45.455 0.00 0.00 0.00 2.74
1568 1639 2.576191 TGAGGGGGATTTGACTTGTAGG 59.424 50.000 0.00 0.00 0.00 3.18
1569 1640 2.844348 GAGGGGGATTTGACTTGTAGGA 59.156 50.000 0.00 0.00 0.00 2.94
1570 1641 2.846827 AGGGGGATTTGACTTGTAGGAG 59.153 50.000 0.00 0.00 0.00 3.69
1571 1642 2.844348 GGGGGATTTGACTTGTAGGAGA 59.156 50.000 0.00 0.00 0.00 3.71
1572 1643 3.459969 GGGGGATTTGACTTGTAGGAGAT 59.540 47.826 0.00 0.00 0.00 2.75
1573 1644 4.445019 GGGGGATTTGACTTGTAGGAGATC 60.445 50.000 0.00 0.00 0.00 2.75
1574 1645 4.410555 GGGGATTTGACTTGTAGGAGATCT 59.589 45.833 0.00 0.00 0.00 2.75
1575 1646 5.602978 GGGGATTTGACTTGTAGGAGATCTA 59.397 44.000 0.00 0.00 0.00 1.98
1576 1647 6.099845 GGGGATTTGACTTGTAGGAGATCTAA 59.900 42.308 0.00 0.00 0.00 2.10
1577 1648 6.987404 GGGATTTGACTTGTAGGAGATCTAAC 59.013 42.308 0.00 0.00 0.00 2.34
1578 1649 6.987404 GGATTTGACTTGTAGGAGATCTAACC 59.013 42.308 0.00 0.00 0.00 2.85
1579 1650 5.934402 TTGACTTGTAGGAGATCTAACCC 57.066 43.478 0.00 0.00 0.00 4.11
1580 1651 4.287552 TGACTTGTAGGAGATCTAACCCC 58.712 47.826 0.00 0.00 0.00 4.95
1581 1652 3.642377 GACTTGTAGGAGATCTAACCCCC 59.358 52.174 0.00 0.00 0.00 5.40
1596 1667 4.169452 CCCCCTCAATCCCTGTCA 57.831 61.111 0.00 0.00 0.00 3.58
1597 1668 2.397815 CCCCCTCAATCCCTGTCAA 58.602 57.895 0.00 0.00 0.00 3.18
1598 1669 0.704076 CCCCCTCAATCCCTGTCAAA 59.296 55.000 0.00 0.00 0.00 2.69
1599 1670 1.616994 CCCCCTCAATCCCTGTCAAAC 60.617 57.143 0.00 0.00 0.00 2.93
1600 1671 1.616994 CCCCTCAATCCCTGTCAAACC 60.617 57.143 0.00 0.00 0.00 3.27
1601 1672 1.355720 CCCTCAATCCCTGTCAAACCT 59.644 52.381 0.00 0.00 0.00 3.50
1602 1673 2.619074 CCCTCAATCCCTGTCAAACCTC 60.619 54.545 0.00 0.00 0.00 3.85
1603 1674 2.307098 CCTCAATCCCTGTCAAACCTCT 59.693 50.000 0.00 0.00 0.00 3.69
1604 1675 3.245052 CCTCAATCCCTGTCAAACCTCTT 60.245 47.826 0.00 0.00 0.00 2.85
1605 1676 4.006319 CTCAATCCCTGTCAAACCTCTTC 58.994 47.826 0.00 0.00 0.00 2.87
1606 1677 3.394274 TCAATCCCTGTCAAACCTCTTCA 59.606 43.478 0.00 0.00 0.00 3.02
1607 1678 4.141274 TCAATCCCTGTCAAACCTCTTCAA 60.141 41.667 0.00 0.00 0.00 2.69
1608 1679 4.664688 ATCCCTGTCAAACCTCTTCAAT 57.335 40.909 0.00 0.00 0.00 2.57
1609 1680 4.453480 TCCCTGTCAAACCTCTTCAATT 57.547 40.909 0.00 0.00 0.00 2.32
1610 1681 4.398319 TCCCTGTCAAACCTCTTCAATTC 58.602 43.478 0.00 0.00 0.00 2.17
1611 1682 3.507622 CCCTGTCAAACCTCTTCAATTCC 59.492 47.826 0.00 0.00 0.00 3.01
1612 1683 3.507622 CCTGTCAAACCTCTTCAATTCCC 59.492 47.826 0.00 0.00 0.00 3.97
1613 1684 4.401925 CTGTCAAACCTCTTCAATTCCCT 58.598 43.478 0.00 0.00 0.00 4.20
1614 1685 4.144297 TGTCAAACCTCTTCAATTCCCTG 58.856 43.478 0.00 0.00 0.00 4.45
1615 1686 4.145052 GTCAAACCTCTTCAATTCCCTGT 58.855 43.478 0.00 0.00 0.00 4.00
1616 1687 4.022849 GTCAAACCTCTTCAATTCCCTGTG 60.023 45.833 0.00 0.00 0.00 3.66
1617 1688 4.141274 TCAAACCTCTTCAATTCCCTGTGA 60.141 41.667 0.00 0.00 0.00 3.58
1618 1689 4.453480 AACCTCTTCAATTCCCTGTGAA 57.547 40.909 0.00 0.00 37.38 3.18
1619 1690 3.756117 ACCTCTTCAATTCCCTGTGAAC 58.244 45.455 0.00 0.00 35.31 3.18
1620 1691 3.084786 CCTCTTCAATTCCCTGTGAACC 58.915 50.000 0.00 0.00 35.31 3.62
1621 1692 2.744202 CTCTTCAATTCCCTGTGAACCG 59.256 50.000 0.00 0.00 35.31 4.44
1622 1693 2.370519 TCTTCAATTCCCTGTGAACCGA 59.629 45.455 0.00 0.00 35.31 4.69
1623 1694 2.940994 TCAATTCCCTGTGAACCGAA 57.059 45.000 0.00 0.00 35.31 4.30
1624 1695 2.500229 TCAATTCCCTGTGAACCGAAC 58.500 47.619 0.00 0.00 35.31 3.95
1625 1696 1.196808 CAATTCCCTGTGAACCGAACG 59.803 52.381 0.00 0.00 35.31 3.95
1626 1697 0.953960 ATTCCCTGTGAACCGAACGC 60.954 55.000 0.00 0.00 35.31 4.84
1627 1698 2.280524 CCCTGTGAACCGAACGCA 60.281 61.111 0.00 0.00 0.00 5.24
1628 1699 2.317609 CCCTGTGAACCGAACGCAG 61.318 63.158 0.00 0.00 42.98 5.18
1629 1700 2.551270 CTGTGAACCGAACGCAGC 59.449 61.111 0.00 0.00 38.65 5.25
1630 1701 2.954753 CTGTGAACCGAACGCAGCC 61.955 63.158 0.00 0.00 38.65 4.85
1631 1702 2.665185 GTGAACCGAACGCAGCCT 60.665 61.111 0.00 0.00 0.00 4.58
1632 1703 1.373748 GTGAACCGAACGCAGCCTA 60.374 57.895 0.00 0.00 0.00 3.93
1633 1704 0.947180 GTGAACCGAACGCAGCCTAA 60.947 55.000 0.00 0.00 0.00 2.69
1634 1705 0.669318 TGAACCGAACGCAGCCTAAG 60.669 55.000 0.00 0.00 0.00 2.18
1635 1706 1.359459 GAACCGAACGCAGCCTAAGG 61.359 60.000 0.00 0.00 0.00 2.69
1745 1816 2.280524 CGGTTGACGCCTTCACCA 60.281 61.111 0.00 0.00 32.26 4.17
1801 1872 1.338020 GCACCCTGACAAGAAACAAGG 59.662 52.381 0.00 0.00 0.00 3.61
1844 1915 5.009410 CAGATTTCAGGACATTAATGAGGCC 59.991 44.000 22.16 17.66 0.00 5.19
1905 1976 4.797800 TCCTCATGTTCAACTCTGAGAG 57.202 45.455 17.45 8.15 37.85 3.20
1913 1984 6.018589 TGTTCAACTCTGAGAGTCTACATG 57.981 41.667 16.50 10.09 42.59 3.21
1917 1988 8.629158 GTTCAACTCTGAGAGTCTACATGATAT 58.371 37.037 16.50 0.00 42.59 1.63
2035 2106 6.932356 ATTAGGAACATAGCAAGTGTGATG 57.068 37.500 0.00 0.00 0.00 3.07
2052 2123 3.312421 GTGATGGTGTACTAATGCGCAAT 59.688 43.478 17.11 9.36 0.00 3.56
2053 2124 3.312146 TGATGGTGTACTAATGCGCAATG 59.688 43.478 17.11 10.32 0.00 2.82
2079 2158 7.434602 GGTTCATCTACGAGTAATCCTAAACAC 59.565 40.741 0.00 0.00 0.00 3.32
2089 2168 7.043325 CGAGTAATCCTAAACACTGCATTAGAC 60.043 40.741 6.41 0.00 32.10 2.59
2106 2185 3.550437 AGACTACATGGGCAGTTCATC 57.450 47.619 0.00 0.00 0.00 2.92
2138 2217 6.103330 TGTATAATTTAGACGCTGCTGAACA 58.897 36.000 0.00 0.00 0.00 3.18
2142 2221 3.653539 TTAGACGCTGCTGAACAACTA 57.346 42.857 0.00 0.00 0.00 2.24
2156 2235 3.848272 ACAACTATGGATTTTGCGGTG 57.152 42.857 0.00 0.00 0.00 4.94
2177 2282 7.571428 GCGGTGCCATAAGACTAAGAATAATTC 60.571 40.741 0.00 0.00 0.00 2.17
2182 2287 8.778358 GCCATAAGACTAAGAATAATTCTGGTG 58.222 37.037 0.00 0.00 40.59 4.17
2185 2290 6.567602 AGACTAAGAATAATTCTGGTGCCT 57.432 37.500 0.00 0.00 40.59 4.75
2213 2318 4.022329 TGAGTTAGAAGATGTCAAGCGTGA 60.022 41.667 0.00 0.00 0.00 4.35
2216 2321 6.631016 AGTTAGAAGATGTCAAGCGTGATTA 58.369 36.000 5.42 0.00 35.80 1.75
2344 2454 4.013267 CAACCTCTTGGAACTCATCTGT 57.987 45.455 0.00 0.00 37.04 3.41
2503 2617 0.868406 GGTCGCATGCATTAGTAGCC 59.132 55.000 19.57 3.51 0.00 3.93
2530 2644 2.496871 TGGCCATCATTTGTTGATCACC 59.503 45.455 0.00 0.00 43.40 4.02
2533 2647 2.754552 CCATCATTTGTTGATCACCGGT 59.245 45.455 0.00 0.00 43.40 5.28
2536 2650 5.449041 CCATCATTTGTTGATCACCGGTTAG 60.449 44.000 2.97 0.00 43.40 2.34
2707 2823 7.944061 TCATTCATGACATCTCTTGTTTTTGT 58.056 30.769 0.00 0.00 39.18 2.83
2840 2961 0.383590 CATCACCACCACACGCAAAA 59.616 50.000 0.00 0.00 0.00 2.44
2850 3325 3.108144 CCACACGCAAAACTTCTTCTTG 58.892 45.455 0.00 0.00 0.00 3.02
2851 3326 3.427503 CCACACGCAAAACTTCTTCTTGT 60.428 43.478 0.00 0.00 0.00 3.16
2852 3327 3.543494 CACACGCAAAACTTCTTCTTGTG 59.457 43.478 0.00 0.00 36.78 3.33
2853 3328 3.438781 ACACGCAAAACTTCTTCTTGTGA 59.561 39.130 1.93 0.00 35.17 3.58
2854 3329 3.786048 CACGCAAAACTTCTTCTTGTGAC 59.214 43.478 1.93 0.00 35.17 3.67
2855 3330 3.438781 ACGCAAAACTTCTTCTTGTGACA 59.561 39.130 1.93 0.00 35.17 3.58
2856 3331 4.096382 ACGCAAAACTTCTTCTTGTGACAT 59.904 37.500 1.93 0.00 35.17 3.06
2861 3336 7.689400 GCAAAACTTCTTCTTGTGACATTTTTG 59.311 33.333 0.00 0.00 34.72 2.44
3010 3485 4.062293 TGGCTGATGTGTGTAGTTGTAAC 58.938 43.478 0.00 0.00 0.00 2.50
3011 3486 4.202315 TGGCTGATGTGTGTAGTTGTAACT 60.202 41.667 2.51 2.51 42.91 2.24
3012 3487 4.755123 GGCTGATGTGTGTAGTTGTAACTT 59.245 41.667 2.20 0.00 40.37 2.66
3013 3488 5.334105 GGCTGATGTGTGTAGTTGTAACTTG 60.334 44.000 2.20 0.00 40.37 3.16
3014 3489 5.236478 GCTGATGTGTGTAGTTGTAACTTGT 59.764 40.000 2.20 0.00 40.37 3.16
3015 3490 6.422701 GCTGATGTGTGTAGTTGTAACTTGTA 59.577 38.462 2.20 0.00 40.37 2.41
3016 3491 7.042321 GCTGATGTGTGTAGTTGTAACTTGTAA 60.042 37.037 2.20 0.00 40.37 2.41
3021 3496 9.386010 TGTGTGTAGTTGTAACTTGTAAAATCT 57.614 29.630 2.20 0.00 40.37 2.40
3087 3562 3.877508 GGCTTAGCGTTTCATCCTACAAT 59.122 43.478 0.00 0.00 0.00 2.71
3257 3732 0.036010 GAGTGTGGTGGGATGTCAGG 60.036 60.000 0.00 0.00 0.00 3.86
3277 3759 2.584791 GAAATGCTTACCGCTGTGTTG 58.415 47.619 0.00 0.00 40.11 3.33
3303 3785 4.240323 ACTCCCTGAACTTCTTCCCTTAA 58.760 43.478 0.00 0.00 0.00 1.85
3331 3815 9.059023 AGGGAAAATAGATATGGTTATAGTCCC 57.941 37.037 0.00 0.00 35.09 4.46
3451 3941 9.213777 TGGAGTATCTTATAGGAGTGACAATTT 57.786 33.333 0.00 0.00 33.73 1.82
3467 3957 6.312672 GTGACAATTTGTTGCCAAGTAACTTT 59.687 34.615 3.08 0.00 0.00 2.66
3485 3975 8.837389 AGTAACTTTCGAAGTATCTTTTGCTTT 58.163 29.630 0.00 0.00 41.91 3.51
3510 4000 7.317842 GAGAAATGCTCAGAGAAATGAATCA 57.682 36.000 0.00 0.00 43.38 2.57
3511 4001 7.086230 AGAAATGCTCAGAGAAATGAATCAC 57.914 36.000 0.00 0.00 0.00 3.06
3512 4002 6.885376 AGAAATGCTCAGAGAAATGAATCACT 59.115 34.615 0.00 0.00 0.00 3.41
3513 4003 7.393796 AGAAATGCTCAGAGAAATGAATCACTT 59.606 33.333 0.00 0.00 0.00 3.16
3514 4004 7.463961 AATGCTCAGAGAAATGAATCACTTT 57.536 32.000 0.00 0.00 0.00 2.66
3515 4005 6.889301 TGCTCAGAGAAATGAATCACTTTT 57.111 33.333 0.00 0.00 0.00 2.27
3516 4006 6.675026 TGCTCAGAGAAATGAATCACTTTTG 58.325 36.000 0.00 0.00 0.00 2.44
3517 4007 6.487668 TGCTCAGAGAAATGAATCACTTTTGA 59.512 34.615 0.00 0.00 35.73 2.69
3518 4008 7.022384 GCTCAGAGAAATGAATCACTTTTGAG 58.978 38.462 0.00 8.89 34.35 3.02
3519 4009 6.906659 TCAGAGAAATGAATCACTTTTGAGC 58.093 36.000 0.00 0.00 34.35 4.26
3520 4010 6.072286 TCAGAGAAATGAATCACTTTTGAGCC 60.072 38.462 0.00 0.00 34.35 4.70
3521 4011 5.184671 AGAGAAATGAATCACTTTTGAGCCC 59.815 40.000 0.00 0.00 34.35 5.19
3522 4012 4.834496 AGAAATGAATCACTTTTGAGCCCA 59.166 37.500 0.00 0.00 34.35 5.36
3523 4013 4.796038 AATGAATCACTTTTGAGCCCAG 57.204 40.909 0.00 0.00 34.35 4.45
3524 4014 2.517959 TGAATCACTTTTGAGCCCAGG 58.482 47.619 0.00 0.00 34.35 4.45
3525 4015 1.203287 GAATCACTTTTGAGCCCAGGC 59.797 52.381 0.00 0.00 42.33 4.85
3535 4025 3.136791 GCCCAGGCTTAGCTGCAC 61.137 66.667 3.59 0.00 38.26 4.57
3536 4026 2.439156 CCCAGGCTTAGCTGCACC 60.439 66.667 3.59 0.00 34.04 5.01
3537 4027 2.439156 CCAGGCTTAGCTGCACCC 60.439 66.667 3.59 0.00 34.04 4.61
3538 4028 2.352422 CAGGCTTAGCTGCACCCA 59.648 61.111 3.59 0.00 34.04 4.51
3539 4029 2.042831 CAGGCTTAGCTGCACCCAC 61.043 63.158 3.59 0.00 34.04 4.61
3540 4030 2.751837 GGCTTAGCTGCACCCACC 60.752 66.667 3.59 0.00 34.04 4.61
3541 4031 2.751837 GCTTAGCTGCACCCACCC 60.752 66.667 1.02 0.00 0.00 4.61
3542 4032 3.081554 CTTAGCTGCACCCACCCT 58.918 61.111 1.02 0.00 0.00 4.34
3543 4033 1.377725 CTTAGCTGCACCCACCCTG 60.378 63.158 1.02 0.00 0.00 4.45
3544 4034 1.841302 CTTAGCTGCACCCACCCTGA 61.841 60.000 1.02 0.00 0.00 3.86
3545 4035 2.124507 TTAGCTGCACCCACCCTGAC 62.125 60.000 1.02 0.00 0.00 3.51
3547 4037 4.704833 CTGCACCCACCCTGACGG 62.705 72.222 0.00 0.00 37.81 4.79
3549 4039 3.948719 GCACCCACCCTGACGGAA 61.949 66.667 0.00 0.00 34.64 4.30
3550 4040 2.833227 CACCCACCCTGACGGAAA 59.167 61.111 0.00 0.00 34.64 3.13
3551 4041 1.149627 CACCCACCCTGACGGAAAA 59.850 57.895 0.00 0.00 34.64 2.29
3552 4042 0.466555 CACCCACCCTGACGGAAAAA 60.467 55.000 0.00 0.00 34.64 1.94
3619 4109 8.755696 TTTTTGTGTGGTAGATAATTTGATGC 57.244 30.769 0.00 0.00 0.00 3.91
3620 4110 5.733226 TGTGTGGTAGATAATTTGATGCG 57.267 39.130 0.00 0.00 0.00 4.73
3621 4111 5.182487 TGTGTGGTAGATAATTTGATGCGT 58.818 37.500 0.00 0.00 0.00 5.24
3622 4112 5.064579 TGTGTGGTAGATAATTTGATGCGTG 59.935 40.000 0.00 0.00 0.00 5.34
3623 4113 4.574421 TGTGGTAGATAATTTGATGCGTGG 59.426 41.667 0.00 0.00 0.00 4.94
3624 4114 4.024048 GTGGTAGATAATTTGATGCGTGGG 60.024 45.833 0.00 0.00 0.00 4.61
3625 4115 3.502211 GGTAGATAATTTGATGCGTGGGG 59.498 47.826 0.00 0.00 0.00 4.96
3626 4116 3.297134 AGATAATTTGATGCGTGGGGT 57.703 42.857 0.00 0.00 0.00 4.95
3627 4117 3.214328 AGATAATTTGATGCGTGGGGTC 58.786 45.455 0.00 0.00 0.00 4.46
3628 4118 2.799126 TAATTTGATGCGTGGGGTCT 57.201 45.000 0.00 0.00 0.00 3.85
3629 4119 1.176527 AATTTGATGCGTGGGGTCTG 58.823 50.000 0.00 0.00 0.00 3.51
3630 4120 1.315257 ATTTGATGCGTGGGGTCTGC 61.315 55.000 0.00 0.00 0.00 4.26
3631 4121 2.410322 TTTGATGCGTGGGGTCTGCT 62.410 55.000 0.00 0.00 0.00 4.24
3632 4122 2.512515 GATGCGTGGGGTCTGCTC 60.513 66.667 0.00 0.00 0.00 4.26
3633 4123 4.101448 ATGCGTGGGGTCTGCTCC 62.101 66.667 0.00 0.00 35.21 4.70
3640 4130 1.923356 TGGGGTCTGCTCCAATTTTC 58.077 50.000 0.00 0.00 43.58 2.29
3641 4131 1.146774 TGGGGTCTGCTCCAATTTTCA 59.853 47.619 0.00 0.00 43.58 2.69
3642 4132 2.247358 GGGGTCTGCTCCAATTTTCAA 58.753 47.619 0.00 0.00 34.61 2.69
3643 4133 2.632512 GGGGTCTGCTCCAATTTTCAAA 59.367 45.455 0.00 0.00 34.61 2.69
3644 4134 3.261643 GGGGTCTGCTCCAATTTTCAAAT 59.738 43.478 0.00 0.00 34.61 2.32
3645 4135 4.248058 GGGTCTGCTCCAATTTTCAAATG 58.752 43.478 0.00 0.00 0.00 2.32
3646 4136 4.021192 GGGTCTGCTCCAATTTTCAAATGA 60.021 41.667 0.00 0.00 0.00 2.57
3647 4137 5.337813 GGGTCTGCTCCAATTTTCAAATGAT 60.338 40.000 0.00 0.00 0.00 2.45
3648 4138 6.168389 GGTCTGCTCCAATTTTCAAATGATT 58.832 36.000 0.00 0.00 0.00 2.57
3649 4139 6.652062 GGTCTGCTCCAATTTTCAAATGATTT 59.348 34.615 0.00 0.00 0.00 2.17
3650 4140 7.360607 GGTCTGCTCCAATTTTCAAATGATTTG 60.361 37.037 11.54 11.54 41.96 2.32
3651 4141 6.651643 TCTGCTCCAATTTTCAAATGATTTGG 59.348 34.615 17.01 0.98 40.98 3.28
3652 4142 6.531923 TGCTCCAATTTTCAAATGATTTGGA 58.468 32.000 17.01 6.42 40.98 3.53
3653 4143 6.427547 TGCTCCAATTTTCAAATGATTTGGAC 59.572 34.615 17.01 12.42 40.98 4.02
3654 4144 6.427547 GCTCCAATTTTCAAATGATTTGGACA 59.572 34.615 17.01 2.75 40.98 4.02
3655 4145 7.120138 GCTCCAATTTTCAAATGATTTGGACAT 59.880 33.333 17.01 5.11 40.98 3.06
3656 4146 8.550710 TCCAATTTTCAAATGATTTGGACATC 57.449 30.769 17.01 0.00 40.98 3.06
3657 4147 8.377034 TCCAATTTTCAAATGATTTGGACATCT 58.623 29.630 17.01 0.00 40.98 2.90
3658 4148 8.447833 CCAATTTTCAAATGATTTGGACATCTG 58.552 33.333 17.01 8.56 40.98 2.90
3659 4149 9.210329 CAATTTTCAAATGATTTGGACATCTGA 57.790 29.630 17.01 0.00 40.98 3.27
3660 4150 8.997621 ATTTTCAAATGATTTGGACATCTGAG 57.002 30.769 17.01 0.00 40.98 3.35
3661 4151 5.571784 TCAAATGATTTGGACATCTGAGC 57.428 39.130 17.01 0.00 40.98 4.26
3662 4152 5.011586 TCAAATGATTTGGACATCTGAGCA 58.988 37.500 17.01 0.00 40.98 4.26
3663 4153 5.124936 TCAAATGATTTGGACATCTGAGCAG 59.875 40.000 17.01 0.00 40.98 4.24
3664 4154 2.362736 TGATTTGGACATCTGAGCAGC 58.637 47.619 0.00 0.00 0.00 5.25
3665 4155 2.026542 TGATTTGGACATCTGAGCAGCT 60.027 45.455 0.00 0.00 0.00 4.24
3666 4156 2.105006 TTTGGACATCTGAGCAGCTC 57.895 50.000 16.21 16.21 0.00 4.09
3667 4157 1.273759 TTGGACATCTGAGCAGCTCT 58.726 50.000 23.15 2.04 0.00 4.09
3668 4158 0.535797 TGGACATCTGAGCAGCTCTG 59.464 55.000 23.15 21.79 0.00 3.35
3669 4159 0.179078 GGACATCTGAGCAGCTCTGG 60.179 60.000 24.66 16.69 31.73 3.86
3670 4160 0.179078 GACATCTGAGCAGCTCTGGG 60.179 60.000 24.66 19.64 31.73 4.45
3671 4161 1.524165 CATCTGAGCAGCTCTGGGC 60.524 63.158 24.66 0.00 42.19 5.36
3672 4162 1.993948 ATCTGAGCAGCTCTGGGCA 60.994 57.895 24.66 9.91 44.79 5.36
3673 4163 1.559965 ATCTGAGCAGCTCTGGGCAA 61.560 55.000 24.66 9.59 44.79 4.52
3674 4164 1.303074 CTGAGCAGCTCTGGGCAAA 60.303 57.895 23.15 0.00 44.79 3.68
3675 4165 0.892358 CTGAGCAGCTCTGGGCAAAA 60.892 55.000 23.15 0.00 44.79 2.44
3676 4166 0.467844 TGAGCAGCTCTGGGCAAAAA 60.468 50.000 23.15 0.00 44.79 1.94
3730 4220 5.281693 TGTTCATGCACTATTTTGACTCG 57.718 39.130 0.00 0.00 0.00 4.18
3731 4221 4.994217 TGTTCATGCACTATTTTGACTCGA 59.006 37.500 0.00 0.00 0.00 4.04
3732 4222 5.643348 TGTTCATGCACTATTTTGACTCGAT 59.357 36.000 0.00 0.00 0.00 3.59
3733 4223 6.149308 TGTTCATGCACTATTTTGACTCGATT 59.851 34.615 0.00 0.00 0.00 3.34
3734 4224 6.741992 TCATGCACTATTTTGACTCGATTT 57.258 33.333 0.00 0.00 0.00 2.17
3735 4225 6.545508 TCATGCACTATTTTGACTCGATTTG 58.454 36.000 0.00 0.00 0.00 2.32
3736 4226 5.940192 TGCACTATTTTGACTCGATTTGT 57.060 34.783 0.00 0.00 0.00 2.83
3737 4227 5.927030 TGCACTATTTTGACTCGATTTGTC 58.073 37.500 0.00 0.00 35.21 3.18
3738 4228 5.700832 TGCACTATTTTGACTCGATTTGTCT 59.299 36.000 5.08 0.00 35.63 3.41
3739 4229 6.204688 TGCACTATTTTGACTCGATTTGTCTT 59.795 34.615 5.08 0.00 35.63 3.01
3740 4230 7.078228 GCACTATTTTGACTCGATTTGTCTTT 58.922 34.615 5.08 0.00 35.63 2.52
3741 4231 7.591426 GCACTATTTTGACTCGATTTGTCTTTT 59.409 33.333 5.08 0.00 35.63 2.27
3742 4232 9.450807 CACTATTTTGACTCGATTTGTCTTTTT 57.549 29.630 5.08 0.00 35.63 1.94
3757 4247 2.344535 TTTTTGCTGAGAGCTGCCC 58.655 52.632 0.00 0.00 42.97 5.36
3758 4248 0.467844 TTTTTGCTGAGAGCTGCCCA 60.468 50.000 0.00 0.00 42.97 5.36
3759 4249 0.892358 TTTTGCTGAGAGCTGCCCAG 60.892 55.000 0.00 2.96 42.97 4.45
3760 4250 1.771783 TTTGCTGAGAGCTGCCCAGA 61.772 55.000 15.42 2.16 42.97 3.86
3761 4251 1.771783 TTGCTGAGAGCTGCCCAGAA 61.772 55.000 15.42 5.03 42.97 3.02
3762 4252 1.449956 GCTGAGAGCTGCCCAGAAG 60.450 63.158 15.42 1.60 38.45 2.85
3763 4253 1.981636 CTGAGAGCTGCCCAGAAGT 59.018 57.895 0.00 0.00 0.00 3.01
3764 4254 0.108233 CTGAGAGCTGCCCAGAAGTC 60.108 60.000 0.00 0.00 0.00 3.01
3765 4255 1.220477 GAGAGCTGCCCAGAAGTCC 59.780 63.158 0.00 0.00 0.00 3.85
3766 4256 1.537397 AGAGCTGCCCAGAAGTCCA 60.537 57.895 0.00 0.00 0.00 4.02
3767 4257 1.130054 AGAGCTGCCCAGAAGTCCAA 61.130 55.000 0.00 0.00 0.00 3.53
3768 4258 0.250901 GAGCTGCCCAGAAGTCCAAA 60.251 55.000 0.00 0.00 0.00 3.28
3769 4259 0.407139 AGCTGCCCAGAAGTCCAAAT 59.593 50.000 0.00 0.00 0.00 2.32
3770 4260 0.529378 GCTGCCCAGAAGTCCAAATG 59.471 55.000 0.00 0.00 0.00 2.32
3771 4261 1.887956 GCTGCCCAGAAGTCCAAATGA 60.888 52.381 0.00 0.00 0.00 2.57
3772 4262 2.731572 CTGCCCAGAAGTCCAAATGAT 58.268 47.619 0.00 0.00 0.00 2.45
3773 4263 2.686915 CTGCCCAGAAGTCCAAATGATC 59.313 50.000 0.00 0.00 0.00 2.92
3774 4264 2.309755 TGCCCAGAAGTCCAAATGATCT 59.690 45.455 0.00 0.00 0.00 2.75
3775 4265 3.523157 TGCCCAGAAGTCCAAATGATCTA 59.477 43.478 0.00 0.00 0.00 1.98
3776 4266 4.018506 TGCCCAGAAGTCCAAATGATCTAA 60.019 41.667 0.00 0.00 0.00 2.10
3777 4267 4.949856 GCCCAGAAGTCCAAATGATCTAAA 59.050 41.667 0.00 0.00 0.00 1.85
3778 4268 5.418840 GCCCAGAAGTCCAAATGATCTAAAA 59.581 40.000 0.00 0.00 0.00 1.52
3779 4269 6.097412 GCCCAGAAGTCCAAATGATCTAAAAT 59.903 38.462 0.00 0.00 0.00 1.82
3780 4270 7.364144 GCCCAGAAGTCCAAATGATCTAAAATT 60.364 37.037 0.00 0.00 0.00 1.82
3781 4271 8.534496 CCCAGAAGTCCAAATGATCTAAAATTT 58.466 33.333 0.00 0.00 0.00 1.82
3782 4272 9.362539 CCAGAAGTCCAAATGATCTAAAATTTG 57.637 33.333 8.54 8.54 41.41 2.32
3786 4276 8.992835 AGTCCAAATGATCTAAAATTTGAAGC 57.007 30.769 14.61 6.97 43.41 3.86
3787 4277 7.756722 AGTCCAAATGATCTAAAATTTGAAGCG 59.243 33.333 14.61 2.55 43.41 4.68
3788 4278 7.009540 GTCCAAATGATCTAAAATTTGAAGCGG 59.990 37.037 14.61 2.19 43.41 5.52
3789 4279 7.035004 CCAAATGATCTAAAATTTGAAGCGGA 58.965 34.615 14.61 0.00 43.41 5.54
3790 4280 7.009540 CCAAATGATCTAAAATTTGAAGCGGAC 59.990 37.037 14.61 0.00 43.41 4.79
3791 4281 5.560966 TGATCTAAAATTTGAAGCGGACC 57.439 39.130 0.00 0.00 0.00 4.46
3792 4282 5.253330 TGATCTAAAATTTGAAGCGGACCT 58.747 37.500 0.00 0.00 0.00 3.85
3793 4283 5.354234 TGATCTAAAATTTGAAGCGGACCTC 59.646 40.000 0.00 0.00 0.00 3.85
3794 4284 4.647611 TCTAAAATTTGAAGCGGACCTCA 58.352 39.130 0.00 0.00 0.00 3.86
3795 4285 3.643159 AAAATTTGAAGCGGACCTCAC 57.357 42.857 0.00 0.00 0.00 3.51
3796 4286 1.156736 AATTTGAAGCGGACCTCACG 58.843 50.000 0.00 0.00 0.00 4.35
3797 4287 0.034896 ATTTGAAGCGGACCTCACGT 59.965 50.000 0.00 0.00 0.00 4.49
3798 4288 0.878523 TTTGAAGCGGACCTCACGTG 60.879 55.000 9.94 9.94 0.00 4.49
3799 4289 1.740332 TTGAAGCGGACCTCACGTGA 61.740 55.000 18.88 18.88 0.00 4.35
3800 4290 1.215647 GAAGCGGACCTCACGTGAT 59.784 57.895 20.40 4.74 0.00 3.06
3801 4291 0.454600 GAAGCGGACCTCACGTGATA 59.545 55.000 20.40 0.00 0.00 2.15
3802 4292 0.892755 AAGCGGACCTCACGTGATAA 59.107 50.000 20.40 0.00 0.00 1.75
3803 4293 0.892755 AGCGGACCTCACGTGATAAA 59.107 50.000 20.40 0.00 0.00 1.40
3804 4294 1.480954 AGCGGACCTCACGTGATAAAT 59.519 47.619 20.40 4.65 0.00 1.40
3805 4295 2.093658 AGCGGACCTCACGTGATAAATT 60.094 45.455 20.40 1.30 0.00 1.82
3806 4296 2.030457 GCGGACCTCACGTGATAAATTG 59.970 50.000 20.40 5.95 0.00 2.32
3807 4297 3.259064 CGGACCTCACGTGATAAATTGT 58.741 45.455 20.40 9.41 0.00 2.71
3808 4298 3.306166 CGGACCTCACGTGATAAATTGTC 59.694 47.826 20.40 16.64 0.00 3.18
3809 4299 4.504858 GGACCTCACGTGATAAATTGTCT 58.495 43.478 20.40 0.00 0.00 3.41
3810 4300 5.657474 GGACCTCACGTGATAAATTGTCTA 58.343 41.667 20.40 0.00 0.00 2.59
3811 4301 5.519206 GGACCTCACGTGATAAATTGTCTAC 59.481 44.000 20.40 4.42 0.00 2.59
3812 4302 5.416947 ACCTCACGTGATAAATTGTCTACC 58.583 41.667 20.40 0.00 0.00 3.18
3813 4303 5.046878 ACCTCACGTGATAAATTGTCTACCA 60.047 40.000 20.40 0.00 0.00 3.25
3814 4304 6.049149 CCTCACGTGATAAATTGTCTACCAT 58.951 40.000 20.40 0.00 0.00 3.55
3815 4305 6.018751 CCTCACGTGATAAATTGTCTACCATG 60.019 42.308 20.40 0.45 0.00 3.66
3816 4306 5.293324 TCACGTGATAAATTGTCTACCATGC 59.707 40.000 15.76 0.00 0.00 4.06
3817 4307 5.064579 CACGTGATAAATTGTCTACCATGCA 59.935 40.000 10.90 0.00 0.00 3.96
3818 4308 5.645929 ACGTGATAAATTGTCTACCATGCAA 59.354 36.000 0.00 0.00 0.00 4.08
3819 4309 6.150307 ACGTGATAAATTGTCTACCATGCAAA 59.850 34.615 0.00 0.00 0.00 3.68
3820 4310 7.026562 CGTGATAAATTGTCTACCATGCAAAA 58.973 34.615 0.00 0.00 0.00 2.44
3821 4311 7.540400 CGTGATAAATTGTCTACCATGCAAAAA 59.460 33.333 0.00 0.00 0.00 1.94
3859 4349 2.123683 TTTTTGGGCGGGTGCAGA 60.124 55.556 0.00 0.00 45.35 4.26
3860 4350 1.532794 TTTTTGGGCGGGTGCAGAT 60.533 52.632 0.00 0.00 45.35 2.90
3861 4351 1.814772 TTTTTGGGCGGGTGCAGATG 61.815 55.000 0.00 0.00 45.35 2.90
3862 4352 2.705312 TTTTGGGCGGGTGCAGATGA 62.705 55.000 0.00 0.00 45.35 2.92
3863 4353 3.626996 TTGGGCGGGTGCAGATGAG 62.627 63.158 0.00 0.00 45.35 2.90
3868 4358 4.864334 GGGTGCAGATGAGCCCGG 62.864 72.222 0.00 0.00 0.00 5.73
3869 4359 4.864334 GGTGCAGATGAGCCCGGG 62.864 72.222 19.09 19.09 0.00 5.73
3872 4362 4.575973 GCAGATGAGCCCGGGCAT 62.576 66.667 45.13 31.90 44.88 4.40
3873 4363 2.281345 CAGATGAGCCCGGGCATC 60.281 66.667 45.13 36.65 44.88 3.91
3874 4364 2.769621 AGATGAGCCCGGGCATCA 60.770 61.111 45.13 39.00 42.52 3.07
3875 4365 2.192979 GATGAGCCCGGGCATCAA 59.807 61.111 45.13 27.69 44.88 2.57
3876 4366 1.453745 GATGAGCCCGGGCATCAAA 60.454 57.895 45.13 25.84 44.88 2.69
3877 4367 1.000233 ATGAGCCCGGGCATCAAAA 60.000 52.632 45.13 24.04 44.88 2.44
3878 4368 1.322538 ATGAGCCCGGGCATCAAAAC 61.323 55.000 45.13 25.28 44.88 2.43
3879 4369 3.051392 GAGCCCGGGCATCAAAACG 62.051 63.158 45.13 5.32 44.88 3.60
3880 4370 4.794439 GCCCGGGCATCAAAACGC 62.794 66.667 40.73 8.62 41.49 4.84
3885 4375 2.804931 GGCATCAAAACGCCGCAC 60.805 61.111 0.00 0.00 38.82 5.34
3886 4376 2.255252 GCATCAAAACGCCGCACT 59.745 55.556 0.00 0.00 0.00 4.40
3887 4377 1.797537 GCATCAAAACGCCGCACTC 60.798 57.895 0.00 0.00 0.00 3.51
3888 4378 1.509787 CATCAAAACGCCGCACTCG 60.510 57.895 0.00 0.00 0.00 4.18
3895 4385 3.470567 CGCCGCACTCGTCAGTTC 61.471 66.667 0.00 0.00 0.00 3.01
3896 4386 2.355837 GCCGCACTCGTCAGTTCA 60.356 61.111 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
179 184 6.763303 AAATGCAAATTTACCAACGAAGAC 57.237 33.333 0.00 0.00 0.00 3.01
200 205 6.209391 CCTTCTTCTGGCCAGAATTTAGAAAA 59.791 38.462 41.01 24.99 45.40 2.29
342 365 4.227300 TCTCTGGTTACCATGGCAACTAAT 59.773 41.667 24.01 0.95 30.82 1.73
343 366 3.585289 TCTCTGGTTACCATGGCAACTAA 59.415 43.478 24.01 13.67 30.82 2.24
356 379 0.609957 TCGCCGTCCTTCTCTGGTTA 60.610 55.000 0.00 0.00 0.00 2.85
391 414 0.329596 GCCATTGTCTCCCACCTCTT 59.670 55.000 0.00 0.00 0.00 2.85
405 428 1.228552 AGTCCAAACTGCCGCCATT 60.229 52.632 0.00 0.00 33.32 3.16
440 463 1.745890 CACAACCCAGTCGTCCTGA 59.254 57.895 6.45 0.00 44.49 3.86
448 471 4.954970 CTGCCCGCACAACCCAGT 62.955 66.667 0.00 0.00 0.00 4.00
642 666 2.393768 CGAGGCAGCATGGTGTGTC 61.394 63.158 24.73 19.21 35.86 3.67
657 681 1.625315 TGGATTGAGCCCATATCCGAG 59.375 52.381 0.00 0.00 40.59 4.63
659 683 1.072173 TGTGGATTGAGCCCATATCCG 59.928 52.381 0.00 0.00 40.59 4.18
675 699 2.205022 ACAAGTCATCACCCATGTGG 57.795 50.000 0.00 0.00 42.98 4.17
722 752 1.079127 TGGCTCGCCAGAAGTTAGC 60.079 57.895 6.52 0.00 41.89 3.09
771 801 1.135689 CCTTGCGATTTTCGTTGGGAG 60.136 52.381 0.00 0.00 42.81 4.30
772 802 0.878416 CCTTGCGATTTTCGTTGGGA 59.122 50.000 0.00 0.00 42.81 4.37
775 805 2.721797 CGTCTCCTTGCGATTTTCGTTG 60.722 50.000 0.00 0.00 42.81 4.10
787 840 4.033587 TGTTTTCTTTTCGTCGTCTCCTTG 59.966 41.667 0.00 0.00 0.00 3.61
788 841 4.186159 TGTTTTCTTTTCGTCGTCTCCTT 58.814 39.130 0.00 0.00 0.00 3.36
845 902 2.822701 GGATTTCGTGGGGTCGCC 60.823 66.667 0.00 0.00 0.00 5.54
846 903 1.673009 TTGGATTTCGTGGGGTCGC 60.673 57.895 0.00 0.00 0.00 5.19
847 904 1.632046 CGTTGGATTTCGTGGGGTCG 61.632 60.000 0.00 0.00 0.00 4.79
848 905 0.320946 TCGTTGGATTTCGTGGGGTC 60.321 55.000 0.00 0.00 0.00 4.46
849 906 0.604511 GTCGTTGGATTTCGTGGGGT 60.605 55.000 0.00 0.00 0.00 4.95
850 907 0.321298 AGTCGTTGGATTTCGTGGGG 60.321 55.000 0.00 0.00 0.00 4.96
851 908 0.796312 CAGTCGTTGGATTTCGTGGG 59.204 55.000 0.00 0.00 0.00 4.61
852 909 0.165944 GCAGTCGTTGGATTTCGTGG 59.834 55.000 0.00 0.00 0.00 4.94
893 950 2.025793 CCTTCCTTCCTTCCTTCCTTCC 60.026 54.545 0.00 0.00 0.00 3.46
894 951 2.025793 CCCTTCCTTCCTTCCTTCCTTC 60.026 54.545 0.00 0.00 0.00 3.46
895 952 1.996291 CCCTTCCTTCCTTCCTTCCTT 59.004 52.381 0.00 0.00 0.00 3.36
896 953 1.154434 TCCCTTCCTTCCTTCCTTCCT 59.846 52.381 0.00 0.00 0.00 3.36
915 972 1.303282 GGGTGTGGATTCCCTGGTC 59.697 63.158 0.00 0.00 40.48 4.02
954 1011 2.511600 CCTCGCGGGTGTGGATTC 60.512 66.667 4.71 0.00 0.00 2.52
1106 1166 0.181350 GGATGAATCGAAGGGGCAGT 59.819 55.000 0.00 0.00 0.00 4.40
1174 1235 1.470051 ACGCATAATCCAACAACCCC 58.530 50.000 0.00 0.00 0.00 4.95
1216 1280 0.892755 CCAGCAACAGCATTCCATGT 59.107 50.000 0.00 0.00 0.00 3.21
1256 1320 4.377431 CGTCAGCAACTTTATCCAACAGAC 60.377 45.833 0.00 0.00 0.00 3.51
1267 1331 0.951558 ATTTCGCCGTCAGCAACTTT 59.048 45.000 0.00 0.00 44.04 2.66
1269 1333 0.951558 AAATTTCGCCGTCAGCAACT 59.048 45.000 0.00 0.00 44.04 3.16
1370 1434 3.414700 CGAACACTGACCAGCGCC 61.415 66.667 2.29 0.00 0.00 6.53
1386 1450 4.330944 TGTAGATTAGTGTAATGGGGCG 57.669 45.455 0.00 0.00 0.00 6.13
1394 1458 7.504926 AGGGGAAAACATGTAGATTAGTGTA 57.495 36.000 0.00 0.00 0.00 2.90
1401 1465 7.122799 GCTTTAAGAAGGGGAAAACATGTAGAT 59.877 37.037 0.00 0.00 33.34 1.98
1421 1492 1.584175 TTTCAGACCGCACGCTTTAA 58.416 45.000 0.00 0.00 0.00 1.52
1446 1517 0.528901 CGGGTATGCGATTTCCGTCA 60.529 55.000 0.00 0.00 41.15 4.35
1459 1530 5.984725 TGACATCAATACAGTTTCGGGTAT 58.015 37.500 0.00 0.00 0.00 2.73
1464 1535 7.582435 AACTACTGACATCAATACAGTTTCG 57.418 36.000 0.00 0.00 43.27 3.46
1513 1584 2.474410 CCTGTGGGAAGAGGTGTAAC 57.526 55.000 0.00 0.00 33.58 2.50
1525 1596 2.693871 CCCCTCCAATCCCTGTGGG 61.694 68.421 0.00 0.00 46.11 4.61
1526 1597 0.995675 ATCCCCTCCAATCCCTGTGG 60.996 60.000 0.00 0.00 37.51 4.17
1527 1598 0.929244 AATCCCCTCCAATCCCTGTG 59.071 55.000 0.00 0.00 0.00 3.66
1528 1599 1.288932 CAAATCCCCTCCAATCCCTGT 59.711 52.381 0.00 0.00 0.00 4.00
1529 1600 1.570501 TCAAATCCCCTCCAATCCCTG 59.429 52.381 0.00 0.00 0.00 4.45
1530 1601 1.855599 CTCAAATCCCCTCCAATCCCT 59.144 52.381 0.00 0.00 0.00 4.20
1531 1602 1.133356 CCTCAAATCCCCTCCAATCCC 60.133 57.143 0.00 0.00 0.00 3.85
1532 1603 1.133356 CCCTCAAATCCCCTCCAATCC 60.133 57.143 0.00 0.00 0.00 3.01
1533 1604 1.133356 CCCCTCAAATCCCCTCCAATC 60.133 57.143 0.00 0.00 0.00 2.67
1534 1605 0.936691 CCCCTCAAATCCCCTCCAAT 59.063 55.000 0.00 0.00 0.00 3.16
1535 1606 1.221213 CCCCCTCAAATCCCCTCCAA 61.221 60.000 0.00 0.00 0.00 3.53
1536 1607 1.622442 CCCCCTCAAATCCCCTCCA 60.622 63.158 0.00 0.00 0.00 3.86
1537 1608 0.702706 ATCCCCCTCAAATCCCCTCC 60.703 60.000 0.00 0.00 0.00 4.30
1538 1609 1.235756 AATCCCCCTCAAATCCCCTC 58.764 55.000 0.00 0.00 0.00 4.30
1539 1610 1.291939 CAAATCCCCCTCAAATCCCCT 59.708 52.381 0.00 0.00 0.00 4.79
1540 1611 1.290732 TCAAATCCCCCTCAAATCCCC 59.709 52.381 0.00 0.00 0.00 4.81
1541 1612 2.023984 AGTCAAATCCCCCTCAAATCCC 60.024 50.000 0.00 0.00 0.00 3.85
1542 1613 3.388552 AGTCAAATCCCCCTCAAATCC 57.611 47.619 0.00 0.00 0.00 3.01
1543 1614 4.089361 ACAAGTCAAATCCCCCTCAAATC 58.911 43.478 0.00 0.00 0.00 2.17
1544 1615 4.132122 ACAAGTCAAATCCCCCTCAAAT 57.868 40.909 0.00 0.00 0.00 2.32
1545 1616 3.611025 ACAAGTCAAATCCCCCTCAAA 57.389 42.857 0.00 0.00 0.00 2.69
1546 1617 3.010138 CCTACAAGTCAAATCCCCCTCAA 59.990 47.826 0.00 0.00 0.00 3.02
1547 1618 2.576191 CCTACAAGTCAAATCCCCCTCA 59.424 50.000 0.00 0.00 0.00 3.86
1548 1619 2.844348 TCCTACAAGTCAAATCCCCCTC 59.156 50.000 0.00 0.00 0.00 4.30
1549 1620 2.846827 CTCCTACAAGTCAAATCCCCCT 59.153 50.000 0.00 0.00 0.00 4.79
1550 1621 2.844348 TCTCCTACAAGTCAAATCCCCC 59.156 50.000 0.00 0.00 0.00 5.40
1551 1622 4.410555 AGATCTCCTACAAGTCAAATCCCC 59.589 45.833 0.00 0.00 0.00 4.81
1552 1623 5.622346 AGATCTCCTACAAGTCAAATCCC 57.378 43.478 0.00 0.00 0.00 3.85
1553 1624 6.987404 GGTTAGATCTCCTACAAGTCAAATCC 59.013 42.308 0.00 0.00 0.00 3.01
1554 1625 6.987404 GGGTTAGATCTCCTACAAGTCAAATC 59.013 42.308 0.00 0.00 0.00 2.17
1555 1626 6.126739 GGGGTTAGATCTCCTACAAGTCAAAT 60.127 42.308 0.00 0.00 0.00 2.32
1556 1627 5.189145 GGGGTTAGATCTCCTACAAGTCAAA 59.811 44.000 0.00 0.00 0.00 2.69
1557 1628 4.715297 GGGGTTAGATCTCCTACAAGTCAA 59.285 45.833 0.00 0.00 0.00 3.18
1558 1629 4.287552 GGGGTTAGATCTCCTACAAGTCA 58.712 47.826 0.00 0.00 0.00 3.41
1559 1630 3.642377 GGGGGTTAGATCTCCTACAAGTC 59.358 52.174 0.00 0.00 0.00 3.01
1560 1631 3.655384 GGGGGTTAGATCTCCTACAAGT 58.345 50.000 0.00 0.00 0.00 3.16
1579 1650 0.704076 TTTGACAGGGATTGAGGGGG 59.296 55.000 0.00 0.00 0.00 5.40
1580 1651 1.616994 GGTTTGACAGGGATTGAGGGG 60.617 57.143 0.00 0.00 0.00 4.79
1581 1652 1.355720 AGGTTTGACAGGGATTGAGGG 59.644 52.381 0.00 0.00 0.00 4.30
1582 1653 2.307098 AGAGGTTTGACAGGGATTGAGG 59.693 50.000 0.00 0.00 0.00 3.86
1583 1654 3.710209 AGAGGTTTGACAGGGATTGAG 57.290 47.619 0.00 0.00 0.00 3.02
1584 1655 3.394274 TGAAGAGGTTTGACAGGGATTGA 59.606 43.478 0.00 0.00 0.00 2.57
1585 1656 3.754965 TGAAGAGGTTTGACAGGGATTG 58.245 45.455 0.00 0.00 0.00 2.67
1586 1657 4.453480 TTGAAGAGGTTTGACAGGGATT 57.547 40.909 0.00 0.00 0.00 3.01
1587 1658 4.664688 ATTGAAGAGGTTTGACAGGGAT 57.335 40.909 0.00 0.00 0.00 3.85
1588 1659 4.398319 GAATTGAAGAGGTTTGACAGGGA 58.602 43.478 0.00 0.00 0.00 4.20
1589 1660 3.507622 GGAATTGAAGAGGTTTGACAGGG 59.492 47.826 0.00 0.00 0.00 4.45
1590 1661 3.507622 GGGAATTGAAGAGGTTTGACAGG 59.492 47.826 0.00 0.00 0.00 4.00
1591 1662 4.217118 CAGGGAATTGAAGAGGTTTGACAG 59.783 45.833 0.00 0.00 0.00 3.51
1592 1663 4.144297 CAGGGAATTGAAGAGGTTTGACA 58.856 43.478 0.00 0.00 0.00 3.58
1593 1664 4.022849 CACAGGGAATTGAAGAGGTTTGAC 60.023 45.833 0.00 0.00 0.00 3.18
1594 1665 4.141274 TCACAGGGAATTGAAGAGGTTTGA 60.141 41.667 0.00 0.00 0.00 2.69
1595 1666 4.144297 TCACAGGGAATTGAAGAGGTTTG 58.856 43.478 0.00 0.00 0.00 2.93
1596 1667 4.453480 TCACAGGGAATTGAAGAGGTTT 57.547 40.909 0.00 0.00 0.00 3.27
1597 1668 4.145052 GTTCACAGGGAATTGAAGAGGTT 58.855 43.478 0.00 0.00 37.93 3.50
1598 1669 3.498661 GGTTCACAGGGAATTGAAGAGGT 60.499 47.826 0.00 0.00 37.93 3.85
1599 1670 3.084786 GGTTCACAGGGAATTGAAGAGG 58.915 50.000 0.00 0.00 37.93 3.69
1600 1671 2.744202 CGGTTCACAGGGAATTGAAGAG 59.256 50.000 0.00 0.00 37.93 2.85
1601 1672 2.370519 TCGGTTCACAGGGAATTGAAGA 59.629 45.455 0.00 0.00 37.93 2.87
1602 1673 2.778299 TCGGTTCACAGGGAATTGAAG 58.222 47.619 0.00 0.00 37.93 3.02
1603 1674 2.882137 GTTCGGTTCACAGGGAATTGAA 59.118 45.455 0.00 0.00 37.93 2.69
1604 1675 2.500229 GTTCGGTTCACAGGGAATTGA 58.500 47.619 0.00 0.00 37.93 2.57
1605 1676 1.196808 CGTTCGGTTCACAGGGAATTG 59.803 52.381 0.00 0.00 37.93 2.32
1606 1677 1.519408 CGTTCGGTTCACAGGGAATT 58.481 50.000 0.00 0.00 37.93 2.17
1607 1678 0.953960 GCGTTCGGTTCACAGGGAAT 60.954 55.000 0.00 0.00 37.93 3.01
1608 1679 1.595929 GCGTTCGGTTCACAGGGAA 60.596 57.895 0.00 0.00 0.00 3.97
1609 1680 2.029964 GCGTTCGGTTCACAGGGA 59.970 61.111 0.00 0.00 0.00 4.20
1610 1681 2.280524 TGCGTTCGGTTCACAGGG 60.281 61.111 0.00 0.00 0.00 4.45
1611 1682 2.954753 GCTGCGTTCGGTTCACAGG 61.955 63.158 0.00 0.00 0.00 4.00
1612 1683 2.551270 GCTGCGTTCGGTTCACAG 59.449 61.111 0.00 0.00 0.00 3.66
1613 1684 2.089887 TAGGCTGCGTTCGGTTCACA 62.090 55.000 0.00 0.00 0.00 3.58
1614 1685 0.947180 TTAGGCTGCGTTCGGTTCAC 60.947 55.000 0.00 0.00 0.00 3.18
1615 1686 0.669318 CTTAGGCTGCGTTCGGTTCA 60.669 55.000 0.00 0.00 0.00 3.18
1616 1687 1.359459 CCTTAGGCTGCGTTCGGTTC 61.359 60.000 0.00 0.00 0.00 3.62
1617 1688 1.375523 CCTTAGGCTGCGTTCGGTT 60.376 57.895 0.00 0.00 0.00 4.44
1618 1689 1.823169 TTCCTTAGGCTGCGTTCGGT 61.823 55.000 0.00 0.00 0.00 4.69
1619 1690 0.672401 TTTCCTTAGGCTGCGTTCGG 60.672 55.000 0.00 1.81 0.00 4.30
1620 1691 0.442699 GTTTCCTTAGGCTGCGTTCG 59.557 55.000 0.00 0.00 0.00 3.95
1621 1692 1.809684 AGTTTCCTTAGGCTGCGTTC 58.190 50.000 0.00 0.00 0.00 3.95
1622 1693 2.271944 AAGTTTCCTTAGGCTGCGTT 57.728 45.000 0.00 0.00 0.00 4.84
1623 1694 2.271944 AAAGTTTCCTTAGGCTGCGT 57.728 45.000 0.00 0.00 0.00 5.24
1624 1695 3.119955 GGTTAAAGTTTCCTTAGGCTGCG 60.120 47.826 0.00 0.00 0.00 5.18
1625 1696 4.079970 AGGTTAAAGTTTCCTTAGGCTGC 58.920 43.478 0.00 0.00 0.00 5.25
1626 1697 6.708285 TCTAGGTTAAAGTTTCCTTAGGCTG 58.292 40.000 0.00 0.00 33.34 4.85
1627 1698 6.947376 TCTAGGTTAAAGTTTCCTTAGGCT 57.053 37.500 1.46 0.00 33.34 4.58
1628 1699 6.093771 GCTTCTAGGTTAAAGTTTCCTTAGGC 59.906 42.308 1.46 0.71 33.34 3.93
1629 1700 7.119407 GTGCTTCTAGGTTAAAGTTTCCTTAGG 59.881 40.741 1.46 0.00 33.34 2.69
1630 1701 7.878644 AGTGCTTCTAGGTTAAAGTTTCCTTAG 59.121 37.037 1.46 0.89 33.34 2.18
1631 1702 7.660208 CAGTGCTTCTAGGTTAAAGTTTCCTTA 59.340 37.037 1.46 0.00 33.34 2.69
1632 1703 6.486993 CAGTGCTTCTAGGTTAAAGTTTCCTT 59.513 38.462 1.46 0.00 33.34 3.36
1633 1704 5.998363 CAGTGCTTCTAGGTTAAAGTTTCCT 59.002 40.000 0.00 0.00 35.60 3.36
1634 1705 5.334957 GCAGTGCTTCTAGGTTAAAGTTTCC 60.335 44.000 8.18 0.00 0.00 3.13
1635 1706 5.470437 AGCAGTGCTTCTAGGTTAAAGTTTC 59.530 40.000 13.14 0.00 33.89 2.78
1652 1723 4.984161 TGAGCAAAAGAATTAAAGCAGTGC 59.016 37.500 7.13 7.13 0.00 4.40
1745 1816 8.452868 AGGAGAAGATAGTAGATTGGTCACTAT 58.547 37.037 0.00 0.00 38.01 2.12
1764 1835 3.274288 GGTGCCATTTCTACAGGAGAAG 58.726 50.000 0.00 0.00 45.05 2.85
1801 1872 3.569701 TCTGGATGTTGCCTTTTCTTCAC 59.430 43.478 0.00 0.00 0.00 3.18
1844 1915 0.889186 ACCAAAGCGCACCTTGGTAG 60.889 55.000 29.30 12.47 34.96 3.18
1917 1988 9.269453 TGCACATGATGACAAAATGATTAAAAA 57.731 25.926 0.00 0.00 0.00 1.94
1924 1995 4.239304 GCTTGCACATGATGACAAAATGA 58.761 39.130 0.00 0.00 0.00 2.57
2028 2099 2.030457 GCGCATTAGTACACCATCACAC 59.970 50.000 0.30 0.00 0.00 3.82
2035 2106 2.014128 ACCATTGCGCATTAGTACACC 58.986 47.619 12.75 0.00 0.00 4.16
2052 2123 7.123098 TGTTTAGGATTACTCGTAGATGAACCA 59.877 37.037 0.00 0.00 33.89 3.67
2053 2124 7.434602 GTGTTTAGGATTACTCGTAGATGAACC 59.565 40.741 0.00 0.00 33.89 3.62
2079 2158 3.136763 CTGCCCATGTAGTCTAATGCAG 58.863 50.000 0.00 0.00 38.98 4.41
2089 2168 2.092753 ACCAGATGAACTGCCCATGTAG 60.093 50.000 0.00 0.00 44.52 2.74
2106 2185 4.989168 GCGTCTAAATTATACAGGGACCAG 59.011 45.833 0.00 0.00 0.00 4.00
2138 2217 1.476488 GGCACCGCAAAATCCATAGTT 59.524 47.619 0.00 0.00 0.00 2.24
2142 2221 1.774110 TATGGCACCGCAAAATCCAT 58.226 45.000 0.00 0.00 40.35 3.41
2156 2235 8.778358 CACCAGAATTATTCTTAGTCTTATGGC 58.222 37.037 4.51 0.00 38.11 4.40
2177 2282 2.069273 CTAACTCACGAAAGGCACCAG 58.931 52.381 0.00 0.00 0.00 4.00
2182 2287 4.246458 ACATCTTCTAACTCACGAAAGGC 58.754 43.478 0.00 0.00 0.00 4.35
2185 2290 5.405571 GCTTGACATCTTCTAACTCACGAAA 59.594 40.000 0.00 0.00 0.00 3.46
2238 2343 7.549147 AACTACACAGAACTATTTAGTCCCA 57.451 36.000 0.00 0.00 34.99 4.37
2343 2453 2.749621 CTGACTTGCCCTAAATGGACAC 59.250 50.000 0.00 0.00 38.35 3.67
2344 2454 2.375174 ACTGACTTGCCCTAAATGGACA 59.625 45.455 0.00 0.00 38.35 4.02
2503 2617 2.739913 CAACAAATGATGGCCAGCTTTG 59.260 45.455 28.66 28.66 33.98 2.77
2530 2644 8.635124 CAAAACTGCAAATAATTACACTAACCG 58.365 33.333 0.00 0.00 0.00 4.44
2616 2732 1.063166 GCTAAAGCAGATGCACCGC 59.937 57.895 7.68 0.00 45.16 5.68
2619 2735 2.363683 AGAAGGCTAAAGCAGATGCAC 58.636 47.619 7.68 0.00 45.16 4.57
2707 2823 6.147164 CGTTTTACTGGATTGCTAAGAACTGA 59.853 38.462 0.00 0.00 0.00 3.41
2840 2961 8.831715 AAAACAAAAATGTCACAAGAAGAAGT 57.168 26.923 0.00 0.00 0.00 3.01
2850 3325 9.145865 TCCTGAAAGTAAAAACAAAAATGTCAC 57.854 29.630 0.00 0.00 0.00 3.67
2851 3326 9.883142 ATCCTGAAAGTAAAAACAAAAATGTCA 57.117 25.926 0.00 0.00 0.00 3.58
2960 3435 1.132643 ACATAGACGCGGACTCTTGTC 59.867 52.381 12.47 0.00 42.22 3.18
3021 3496 8.896320 TGTGCTAAACTTTGTAAACTAGATGA 57.104 30.769 0.00 0.00 0.00 2.92
3024 3499 9.252962 GTACTGTGCTAAACTTTGTAAACTAGA 57.747 33.333 0.00 0.00 0.00 2.43
3031 3506 7.053316 TGGTAGTACTGTGCTAAACTTTGTA 57.947 36.000 5.39 0.00 0.00 2.41
3247 3722 2.952310 GGTAAGCATTTCCTGACATCCC 59.048 50.000 0.00 0.00 32.12 3.85
3277 3759 4.041815 AGGGAAGAAGTTCAGGGAGTAAAC 59.958 45.833 5.50 0.00 33.93 2.01
3331 3815 6.852664 AGTGAAAAGGAAAATACTAATGCCG 58.147 36.000 0.00 0.00 0.00 5.69
3451 3941 3.942748 ACTTCGAAAGTTACTTGGCAACA 59.057 39.130 0.00 0.00 42.58 3.33
3454 3944 5.790593 AGATACTTCGAAAGTTACTTGGCA 58.209 37.500 0.00 0.00 42.81 4.92
3467 3957 7.490962 TTTCTCAAAGCAAAAGATACTTCGA 57.509 32.000 0.00 0.00 0.00 3.71
3499 3989 4.834496 TGGGCTCAAAAGTGATTCATTTCT 59.166 37.500 0.00 0.00 31.85 2.52
3508 3998 4.500265 GCCTGGGCTCAAAAGTGA 57.500 55.556 4.12 0.00 38.26 3.41
3518 4008 3.136791 GTGCAGCTAAGCCTGGGC 61.137 66.667 3.00 3.00 42.33 5.36
3519 4009 2.439156 GGTGCAGCTAAGCCTGGG 60.439 66.667 9.07 0.00 33.44 4.45
3520 4010 2.439156 GGGTGCAGCTAAGCCTGG 60.439 66.667 16.65 0.00 33.44 4.45
3521 4011 2.042831 GTGGGTGCAGCTAAGCCTG 61.043 63.158 16.65 0.00 36.14 4.85
3522 4012 2.352805 GTGGGTGCAGCTAAGCCT 59.647 61.111 16.65 0.00 36.14 4.58
3523 4013 2.751837 GGTGGGTGCAGCTAAGCC 60.752 66.667 16.65 4.41 35.69 4.35
3524 4014 2.751837 GGGTGGGTGCAGCTAAGC 60.752 66.667 16.65 13.48 0.00 3.09
3525 4015 1.377725 CAGGGTGGGTGCAGCTAAG 60.378 63.158 16.65 0.00 0.00 2.18
3526 4016 1.845664 TCAGGGTGGGTGCAGCTAA 60.846 57.895 16.65 1.47 0.00 3.09
3527 4017 2.203922 TCAGGGTGGGTGCAGCTA 60.204 61.111 16.65 6.91 0.00 3.32
3528 4018 3.958860 GTCAGGGTGGGTGCAGCT 61.959 66.667 16.65 0.00 0.00 4.24
3530 4020 4.704833 CCGTCAGGGTGGGTGCAG 62.705 72.222 0.00 0.00 0.00 4.41
3532 4022 2.969300 TTTTCCGTCAGGGTGGGTGC 62.969 60.000 0.00 0.00 38.33 5.01
3533 4023 0.466555 TTTTTCCGTCAGGGTGGGTG 60.467 55.000 0.00 0.00 38.33 4.61
3534 4024 1.924352 TTTTTCCGTCAGGGTGGGT 59.076 52.632 0.00 0.00 38.33 4.51
3535 4025 4.911901 TTTTTCCGTCAGGGTGGG 57.088 55.556 0.00 0.00 38.33 4.61
3594 4084 7.540400 CGCATCAAATTATCTACCACACAAAAA 59.460 33.333 0.00 0.00 0.00 1.94
3595 4085 7.026562 CGCATCAAATTATCTACCACACAAAA 58.973 34.615 0.00 0.00 0.00 2.44
3596 4086 6.150307 ACGCATCAAATTATCTACCACACAAA 59.850 34.615 0.00 0.00 0.00 2.83
3597 4087 5.645929 ACGCATCAAATTATCTACCACACAA 59.354 36.000 0.00 0.00 0.00 3.33
3598 4088 5.064579 CACGCATCAAATTATCTACCACACA 59.935 40.000 0.00 0.00 0.00 3.72
3599 4089 5.501715 CACGCATCAAATTATCTACCACAC 58.498 41.667 0.00 0.00 0.00 3.82
3600 4090 4.574421 CCACGCATCAAATTATCTACCACA 59.426 41.667 0.00 0.00 0.00 4.17
3601 4091 4.024048 CCCACGCATCAAATTATCTACCAC 60.024 45.833 0.00 0.00 0.00 4.16
3602 4092 4.133820 CCCACGCATCAAATTATCTACCA 58.866 43.478 0.00 0.00 0.00 3.25
3603 4093 3.502211 CCCCACGCATCAAATTATCTACC 59.498 47.826 0.00 0.00 0.00 3.18
3604 4094 4.134563 ACCCCACGCATCAAATTATCTAC 58.865 43.478 0.00 0.00 0.00 2.59
3605 4095 4.102524 AGACCCCACGCATCAAATTATCTA 59.897 41.667 0.00 0.00 0.00 1.98
3606 4096 3.117888 AGACCCCACGCATCAAATTATCT 60.118 43.478 0.00 0.00 0.00 1.98
3607 4097 3.003689 CAGACCCCACGCATCAAATTATC 59.996 47.826 0.00 0.00 0.00 1.75
3608 4098 2.951642 CAGACCCCACGCATCAAATTAT 59.048 45.455 0.00 0.00 0.00 1.28
3609 4099 2.364632 CAGACCCCACGCATCAAATTA 58.635 47.619 0.00 0.00 0.00 1.40
3610 4100 1.176527 CAGACCCCACGCATCAAATT 58.823 50.000 0.00 0.00 0.00 1.82
3611 4101 1.315257 GCAGACCCCACGCATCAAAT 61.315 55.000 0.00 0.00 0.00 2.32
3612 4102 1.971167 GCAGACCCCACGCATCAAA 60.971 57.895 0.00 0.00 0.00 2.69
3613 4103 2.359850 GCAGACCCCACGCATCAA 60.360 61.111 0.00 0.00 0.00 2.57
3614 4104 3.315142 GAGCAGACCCCACGCATCA 62.315 63.158 0.00 0.00 0.00 3.07
3615 4105 2.512515 GAGCAGACCCCACGCATC 60.513 66.667 0.00 0.00 0.00 3.91
3616 4106 4.101448 GGAGCAGACCCCACGCAT 62.101 66.667 0.00 0.00 0.00 4.73
3618 4108 3.628646 ATTGGAGCAGACCCCACGC 62.629 63.158 0.00 0.00 31.11 5.34
3619 4109 0.609131 AAATTGGAGCAGACCCCACG 60.609 55.000 0.00 0.00 31.11 4.94
3620 4110 1.546029 GAAAATTGGAGCAGACCCCAC 59.454 52.381 0.00 0.00 31.11 4.61
3621 4111 1.146774 TGAAAATTGGAGCAGACCCCA 59.853 47.619 0.00 0.00 0.00 4.96
3622 4112 1.923356 TGAAAATTGGAGCAGACCCC 58.077 50.000 0.00 0.00 0.00 4.95
3623 4113 4.021192 TCATTTGAAAATTGGAGCAGACCC 60.021 41.667 0.00 0.00 0.00 4.46
3624 4114 5.138125 TCATTTGAAAATTGGAGCAGACC 57.862 39.130 0.00 0.00 0.00 3.85
3625 4115 7.360607 CCAAATCATTTGAAAATTGGAGCAGAC 60.361 37.037 11.98 0.00 43.26 3.51
3626 4116 6.651643 CCAAATCATTTGAAAATTGGAGCAGA 59.348 34.615 11.98 0.00 43.26 4.26
3627 4117 6.651643 TCCAAATCATTTGAAAATTGGAGCAG 59.348 34.615 11.98 0.00 43.26 4.24
3628 4118 6.427547 GTCCAAATCATTTGAAAATTGGAGCA 59.572 34.615 11.98 3.97 41.57 4.26
3629 4119 6.427547 TGTCCAAATCATTTGAAAATTGGAGC 59.572 34.615 11.98 15.03 41.57 4.70
3630 4120 7.966246 TGTCCAAATCATTTGAAAATTGGAG 57.034 32.000 11.98 0.00 41.57 3.86
3631 4121 8.377034 AGATGTCCAAATCATTTGAAAATTGGA 58.623 29.630 11.98 15.89 43.26 3.53
3632 4122 8.447833 CAGATGTCCAAATCATTTGAAAATTGG 58.552 33.333 11.98 13.03 43.26 3.16
3633 4123 9.210329 TCAGATGTCCAAATCATTTGAAAATTG 57.790 29.630 11.98 3.51 43.26 2.32
3634 4124 9.431887 CTCAGATGTCCAAATCATTTGAAAATT 57.568 29.630 11.98 0.00 43.26 1.82
3635 4125 7.548075 GCTCAGATGTCCAAATCATTTGAAAAT 59.452 33.333 11.98 0.00 43.26 1.82
3636 4126 6.869913 GCTCAGATGTCCAAATCATTTGAAAA 59.130 34.615 11.98 0.00 43.26 2.29
3637 4127 6.015265 TGCTCAGATGTCCAAATCATTTGAAA 60.015 34.615 11.98 0.00 43.26 2.69
3638 4128 5.477637 TGCTCAGATGTCCAAATCATTTGAA 59.522 36.000 11.98 0.00 43.26 2.69
3639 4129 5.011586 TGCTCAGATGTCCAAATCATTTGA 58.988 37.500 11.98 0.33 43.26 2.69
3640 4130 5.319140 TGCTCAGATGTCCAAATCATTTG 57.681 39.130 2.80 2.80 40.32 2.32
3641 4131 4.142227 GCTGCTCAGATGTCCAAATCATTT 60.142 41.667 0.29 0.00 0.00 2.32
3642 4132 3.380637 GCTGCTCAGATGTCCAAATCATT 59.619 43.478 0.29 0.00 0.00 2.57
3643 4133 2.950309 GCTGCTCAGATGTCCAAATCAT 59.050 45.455 0.29 0.00 0.00 2.45
3644 4134 2.026542 AGCTGCTCAGATGTCCAAATCA 60.027 45.455 0.00 0.00 0.00 2.57
3645 4135 2.613133 GAGCTGCTCAGATGTCCAAATC 59.387 50.000 24.02 0.00 0.00 2.17
3646 4136 2.239150 AGAGCTGCTCAGATGTCCAAAT 59.761 45.455 29.49 3.19 32.06 2.32
3647 4137 1.627329 AGAGCTGCTCAGATGTCCAAA 59.373 47.619 29.49 0.00 32.06 3.28
3648 4138 1.066358 CAGAGCTGCTCAGATGTCCAA 60.066 52.381 29.49 0.00 32.06 3.53
3649 4139 0.535797 CAGAGCTGCTCAGATGTCCA 59.464 55.000 29.49 0.00 32.06 4.02
3650 4140 0.179078 CCAGAGCTGCTCAGATGTCC 60.179 60.000 29.49 2.47 32.06 4.02
3651 4141 0.179078 CCCAGAGCTGCTCAGATGTC 60.179 60.000 29.49 3.53 32.06 3.06
3652 4142 1.906253 CCCAGAGCTGCTCAGATGT 59.094 57.895 29.49 7.47 32.06 3.06
3653 4143 1.524165 GCCCAGAGCTGCTCAGATG 60.524 63.158 29.49 19.11 38.99 2.90
3654 4144 1.559965 TTGCCCAGAGCTGCTCAGAT 61.560 55.000 29.49 8.25 44.23 2.90
3655 4145 1.771783 TTTGCCCAGAGCTGCTCAGA 61.772 55.000 29.49 5.19 44.23 3.27
3656 4146 0.892358 TTTTGCCCAGAGCTGCTCAG 60.892 55.000 29.49 22.08 44.23 3.35
3657 4147 0.467844 TTTTTGCCCAGAGCTGCTCA 60.468 50.000 29.49 8.15 44.23 4.26
3658 4148 2.344535 TTTTTGCCCAGAGCTGCTC 58.655 52.632 21.72 21.72 44.23 4.26
3659 4149 4.605064 TTTTTGCCCAGAGCTGCT 57.395 50.000 0.00 0.00 44.23 4.24
3704 4194 8.124823 CGAGTCAAAATAGTGCATGAACAATAT 58.875 33.333 6.60 0.00 32.52 1.28
3705 4195 7.333174 TCGAGTCAAAATAGTGCATGAACAATA 59.667 33.333 6.60 0.00 0.00 1.90
3706 4196 6.149308 TCGAGTCAAAATAGTGCATGAACAAT 59.851 34.615 6.60 0.00 0.00 2.71
3707 4197 5.468409 TCGAGTCAAAATAGTGCATGAACAA 59.532 36.000 6.60 0.00 0.00 2.83
3708 4198 4.994217 TCGAGTCAAAATAGTGCATGAACA 59.006 37.500 6.60 0.00 0.00 3.18
3709 4199 5.530519 TCGAGTCAAAATAGTGCATGAAC 57.469 39.130 0.00 0.00 0.00 3.18
3710 4200 6.741992 AATCGAGTCAAAATAGTGCATGAA 57.258 33.333 0.00 0.00 0.00 2.57
3711 4201 6.149308 ACAAATCGAGTCAAAATAGTGCATGA 59.851 34.615 0.00 0.00 0.00 3.07
3712 4202 6.317088 ACAAATCGAGTCAAAATAGTGCATG 58.683 36.000 0.00 0.00 0.00 4.06
3713 4203 6.372659 AGACAAATCGAGTCAAAATAGTGCAT 59.627 34.615 6.13 0.00 38.46 3.96
3714 4204 5.700832 AGACAAATCGAGTCAAAATAGTGCA 59.299 36.000 6.13 0.00 38.46 4.57
3715 4205 6.170675 AGACAAATCGAGTCAAAATAGTGC 57.829 37.500 6.13 0.00 38.46 4.40
3716 4206 9.450807 AAAAAGACAAATCGAGTCAAAATAGTG 57.549 29.630 6.13 0.00 38.46 2.74
3739 4229 0.467844 TGGGCAGCTCTCAGCAAAAA 60.468 50.000 0.00 0.00 45.56 1.94
3740 4230 0.892358 CTGGGCAGCTCTCAGCAAAA 60.892 55.000 0.00 0.00 45.56 2.44
3741 4231 1.303074 CTGGGCAGCTCTCAGCAAA 60.303 57.895 0.00 0.00 45.56 3.68
3742 4232 1.771783 TTCTGGGCAGCTCTCAGCAA 61.772 55.000 7.86 2.64 45.56 3.91
3743 4233 2.181445 CTTCTGGGCAGCTCTCAGCA 62.181 60.000 7.86 0.00 45.56 4.41
3744 4234 1.449956 CTTCTGGGCAGCTCTCAGC 60.450 63.158 7.86 0.00 42.84 4.26
3745 4235 0.108233 GACTTCTGGGCAGCTCTCAG 60.108 60.000 6.69 6.69 0.00 3.35
3746 4236 1.548357 GGACTTCTGGGCAGCTCTCA 61.548 60.000 0.00 0.00 0.00 3.27
3747 4237 1.220477 GGACTTCTGGGCAGCTCTC 59.780 63.158 0.00 0.00 0.00 3.20
3748 4238 1.130054 TTGGACTTCTGGGCAGCTCT 61.130 55.000 0.00 0.00 0.00 4.09
3749 4239 0.250901 TTTGGACTTCTGGGCAGCTC 60.251 55.000 0.00 0.00 0.00 4.09
3750 4240 0.407139 ATTTGGACTTCTGGGCAGCT 59.593 50.000 0.00 0.00 0.00 4.24
3751 4241 0.529378 CATTTGGACTTCTGGGCAGC 59.471 55.000 0.00 0.00 0.00 5.25
3752 4242 2.205022 TCATTTGGACTTCTGGGCAG 57.795 50.000 0.00 0.00 0.00 4.85
3753 4243 2.309755 AGATCATTTGGACTTCTGGGCA 59.690 45.455 0.00 0.00 0.00 5.36
3754 4244 3.010200 AGATCATTTGGACTTCTGGGC 57.990 47.619 0.00 0.00 0.00 5.36
3755 4245 7.651027 ATTTTAGATCATTTGGACTTCTGGG 57.349 36.000 0.00 0.00 0.00 4.45
3756 4246 9.362539 CAAATTTTAGATCATTTGGACTTCTGG 57.637 33.333 7.88 0.00 36.93 3.86
3760 4250 9.428097 GCTTCAAATTTTAGATCATTTGGACTT 57.572 29.630 13.37 0.00 39.76 3.01
3761 4251 7.756722 CGCTTCAAATTTTAGATCATTTGGACT 59.243 33.333 13.37 0.00 39.76 3.85
3762 4252 7.009540 CCGCTTCAAATTTTAGATCATTTGGAC 59.990 37.037 13.37 5.70 39.76 4.02
3763 4253 7.035004 CCGCTTCAAATTTTAGATCATTTGGA 58.965 34.615 13.37 6.69 39.76 3.53
3764 4254 7.009540 GTCCGCTTCAAATTTTAGATCATTTGG 59.990 37.037 13.37 3.62 39.76 3.28
3765 4255 7.009540 GGTCCGCTTCAAATTTTAGATCATTTG 59.990 37.037 9.04 9.04 40.39 2.32
3766 4256 7.035612 GGTCCGCTTCAAATTTTAGATCATTT 58.964 34.615 0.00 0.00 0.00 2.32
3767 4257 6.378280 AGGTCCGCTTCAAATTTTAGATCATT 59.622 34.615 0.00 0.00 0.00 2.57
3768 4258 5.888161 AGGTCCGCTTCAAATTTTAGATCAT 59.112 36.000 0.00 0.00 0.00 2.45
3769 4259 5.253330 AGGTCCGCTTCAAATTTTAGATCA 58.747 37.500 0.00 0.00 0.00 2.92
3770 4260 5.354234 TGAGGTCCGCTTCAAATTTTAGATC 59.646 40.000 0.00 0.00 0.00 2.75
3771 4261 5.123979 GTGAGGTCCGCTTCAAATTTTAGAT 59.876 40.000 0.00 0.00 32.39 1.98
3772 4262 4.454504 GTGAGGTCCGCTTCAAATTTTAGA 59.545 41.667 0.00 0.00 32.39 2.10
3773 4263 4.669197 CGTGAGGTCCGCTTCAAATTTTAG 60.669 45.833 0.00 0.00 32.39 1.85
3774 4264 3.187637 CGTGAGGTCCGCTTCAAATTTTA 59.812 43.478 0.00 0.00 32.39 1.52
3775 4265 2.031157 CGTGAGGTCCGCTTCAAATTTT 60.031 45.455 0.00 0.00 32.39 1.82
3776 4266 1.535462 CGTGAGGTCCGCTTCAAATTT 59.465 47.619 0.00 0.00 32.39 1.82
3777 4267 1.156736 CGTGAGGTCCGCTTCAAATT 58.843 50.000 0.00 0.00 32.39 1.82
3778 4268 0.034896 ACGTGAGGTCCGCTTCAAAT 59.965 50.000 0.00 0.00 32.39 2.32
3779 4269 0.878523 CACGTGAGGTCCGCTTCAAA 60.879 55.000 10.90 0.00 32.39 2.69
3780 4270 1.300620 CACGTGAGGTCCGCTTCAA 60.301 57.895 10.90 0.00 32.39 2.69
3781 4271 1.532604 ATCACGTGAGGTCCGCTTCA 61.533 55.000 24.41 0.00 0.00 3.02
3782 4272 0.454600 TATCACGTGAGGTCCGCTTC 59.545 55.000 24.41 0.00 0.00 3.86
3783 4273 0.892755 TTATCACGTGAGGTCCGCTT 59.107 50.000 24.41 6.83 0.00 4.68
3784 4274 0.892755 TTTATCACGTGAGGTCCGCT 59.107 50.000 24.41 7.61 0.00 5.52
3785 4275 1.935933 ATTTATCACGTGAGGTCCGC 58.064 50.000 24.41 0.00 0.00 5.54
3786 4276 3.259064 ACAATTTATCACGTGAGGTCCG 58.741 45.455 24.41 12.44 0.00 4.79
3787 4277 4.504858 AGACAATTTATCACGTGAGGTCC 58.495 43.478 24.41 7.32 0.00 4.46
3788 4278 5.519206 GGTAGACAATTTATCACGTGAGGTC 59.481 44.000 24.41 20.27 0.00 3.85
3789 4279 5.046878 TGGTAGACAATTTATCACGTGAGGT 60.047 40.000 24.41 10.73 0.00 3.85
3790 4280 5.416083 TGGTAGACAATTTATCACGTGAGG 58.584 41.667 24.41 10.79 0.00 3.86
3791 4281 6.510157 GCATGGTAGACAATTTATCACGTGAG 60.510 42.308 24.41 11.37 0.00 3.51
3792 4282 5.293324 GCATGGTAGACAATTTATCACGTGA 59.707 40.000 22.48 22.48 0.00 4.35
3793 4283 5.064579 TGCATGGTAGACAATTTATCACGTG 59.935 40.000 9.94 9.94 0.00 4.49
3794 4284 5.182487 TGCATGGTAGACAATTTATCACGT 58.818 37.500 0.00 0.00 0.00 4.49
3795 4285 5.733226 TGCATGGTAGACAATTTATCACG 57.267 39.130 0.00 0.00 0.00 4.35
3796 4286 8.755696 TTTTTGCATGGTAGACAATTTATCAC 57.244 30.769 0.00 0.00 0.00 3.06
3842 4332 1.532794 ATCTGCACCCGCCCAAAAA 60.533 52.632 0.00 0.00 37.32 1.94
3843 4333 2.117206 ATCTGCACCCGCCCAAAA 59.883 55.556 0.00 0.00 37.32 2.44
3844 4334 2.676121 CATCTGCACCCGCCCAAA 60.676 61.111 0.00 0.00 37.32 3.28
3845 4335 3.626996 CTCATCTGCACCCGCCCAA 62.627 63.158 0.00 0.00 37.32 4.12
3846 4336 4.100084 CTCATCTGCACCCGCCCA 62.100 66.667 0.00 0.00 37.32 5.36
3851 4341 4.864334 CCGGGCTCATCTGCACCC 62.864 72.222 0.00 0.00 39.12 4.61
3852 4342 4.864334 CCCGGGCTCATCTGCACC 62.864 72.222 8.08 0.00 31.60 5.01
3855 4345 4.575973 ATGCCCGGGCTCATCTGC 62.576 66.667 43.34 17.51 42.51 4.26
3856 4346 2.281345 GATGCCCGGGCTCATCTG 60.281 66.667 43.34 6.35 42.51 2.90
3857 4347 1.925285 TTTGATGCCCGGGCTCATCT 61.925 55.000 43.34 23.63 42.51 2.90
3858 4348 1.037030 TTTTGATGCCCGGGCTCATC 61.037 55.000 43.34 36.00 42.51 2.92
3859 4349 1.000233 TTTTGATGCCCGGGCTCAT 60.000 52.632 43.34 31.09 42.51 2.90
3860 4350 1.976474 GTTTTGATGCCCGGGCTCA 60.976 57.895 43.34 36.55 42.51 4.26
3861 4351 2.885113 GTTTTGATGCCCGGGCTC 59.115 61.111 43.34 34.65 42.51 4.70
3862 4352 3.061848 CGTTTTGATGCCCGGGCT 61.062 61.111 43.34 29.72 42.51 5.19
3863 4353 4.794439 GCGTTTTGATGCCCGGGC 62.794 66.667 39.40 39.40 42.35 6.13
3864 4354 4.128388 GGCGTTTTGATGCCCGGG 62.128 66.667 19.09 19.09 45.73 5.73
3869 4359 1.797537 GAGTGCGGCGTTTTGATGC 60.798 57.895 9.37 0.00 0.00 3.91
3870 4360 1.509787 CGAGTGCGGCGTTTTGATG 60.510 57.895 9.37 0.00 0.00 3.07
3871 4361 1.897398 GACGAGTGCGGCGTTTTGAT 61.897 55.000 9.37 0.00 42.77 2.57
3872 4362 2.586635 ACGAGTGCGGCGTTTTGA 60.587 55.556 9.37 0.00 43.17 2.69
3873 4363 2.127758 GACGAGTGCGGCGTTTTG 60.128 61.111 9.37 0.82 42.77 2.44
3880 4370 1.004277 GAGTGAACTGACGAGTGCGG 61.004 60.000 0.00 0.00 43.17 5.69
3881 4371 0.039978 AGAGTGAACTGACGAGTGCG 60.040 55.000 0.00 0.00 44.79 5.34
3882 4372 2.141535 AAGAGTGAACTGACGAGTGC 57.858 50.000 0.00 0.00 30.61 4.40
3883 4373 3.253677 AGGTAAGAGTGAACTGACGAGTG 59.746 47.826 0.00 0.00 30.61 3.51
3884 4374 3.488363 AGGTAAGAGTGAACTGACGAGT 58.512 45.455 0.00 0.00 0.00 4.18
3885 4375 4.506886 AAGGTAAGAGTGAACTGACGAG 57.493 45.455 0.00 0.00 0.00 4.18
3886 4376 7.108194 TCTATAAGGTAAGAGTGAACTGACGA 58.892 38.462 0.00 0.00 0.00 4.20
3887 4377 7.317842 TCTATAAGGTAAGAGTGAACTGACG 57.682 40.000 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.