Multiple sequence alignment - TraesCS6B01G337700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G337700 chr6B 100.000 3722 0 0 1 3722 594662674 594666395 0.000000e+00 6874.0
1 TraesCS6B01G337700 chr6B 97.399 346 8 1 3365 3710 671391508 671391852 4.140000e-164 588.0
2 TraesCS6B01G337700 chr6B 99.038 104 1 0 2802 2905 594665371 594665474 1.760000e-43 187.0
3 TraesCS6B01G337700 chr6B 99.038 104 1 0 2698 2801 594665475 594665578 1.760000e-43 187.0
4 TraesCS6B01G337700 chr6B 86.719 128 17 0 2994 3121 174617797 174617670 3.870000e-30 143.0
5 TraesCS6B01G337700 chr6D 92.714 1647 68 12 919 2544 397648033 397649648 0.000000e+00 2329.0
6 TraesCS6B01G337700 chr6D 89.965 847 75 6 1 839 313021345 313020501 0.000000e+00 1085.0
7 TraesCS6B01G337700 chr6D 89.265 857 76 14 1 844 464696962 464696109 0.000000e+00 1059.0
8 TraesCS6B01G337700 chr6D 93.367 196 13 0 2527 2722 397650959 397651154 1.310000e-74 291.0
9 TraesCS6B01G337700 chr6D 87.923 207 23 2 3021 3226 397651768 397651973 3.710000e-60 243.0
10 TraesCS6B01G337700 chr6D 94.483 145 4 2 3223 3364 397652232 397652375 1.740000e-53 220.0
11 TraesCS6B01G337700 chr6D 84.914 232 12 7 2813 3022 397651172 397651402 2.910000e-51 213.0
12 TraesCS6B01G337700 chr6D 96.774 93 3 0 2709 2801 397651172 397651264 4.980000e-34 156.0
13 TraesCS6B01G337700 chr5D 90.436 826 74 4 1 821 327474966 327474141 0.000000e+00 1083.0
14 TraesCS6B01G337700 chr5D 94.737 57 3 0 1133 1189 481145896 481145840 5.120000e-14 89.8
15 TraesCS6B01G337700 chr2B 89.517 849 79 8 1 844 510395451 510396294 0.000000e+00 1066.0
16 TraesCS6B01G337700 chr2B 89.367 837 75 8 1 828 184911886 184911055 0.000000e+00 1040.0
17 TraesCS6B01G337700 chr2B 96.944 360 10 1 3364 3722 9356691 9357050 1.480000e-168 603.0
18 TraesCS6B01G337700 chr2B 96.657 359 11 1 3364 3722 42528153 42528510 2.470000e-166 595.0
19 TraesCS6B01G337700 chr2B 95.856 362 12 3 3364 3722 1054674 1055035 1.930000e-162 582.0
20 TraesCS6B01G337700 chr2B 75.325 308 60 13 1103 1402 36850752 36850453 2.330000e-27 134.0
21 TraesCS6B01G337700 chr7D 89.442 843 81 6 1 836 572314505 572313664 0.000000e+00 1057.0
22 TraesCS6B01G337700 chr7D 89.033 848 83 6 1 840 381003969 381004814 0.000000e+00 1042.0
23 TraesCS6B01G337700 chr3A 89.581 835 77 8 1 827 708920181 708919349 0.000000e+00 1051.0
24 TraesCS6B01G337700 chr3B 88.849 843 89 4 1 840 504647687 504648527 0.000000e+00 1031.0
25 TraesCS6B01G337700 chr3B 96.399 361 11 1 3364 3722 586868426 586868786 8.900000e-166 593.0
26 TraesCS6B01G337700 chr3B 88.034 117 14 0 3005 3121 766645631 766645515 5.010000e-29 139.0
27 TraesCS6B01G337700 chr3B 86.325 117 16 0 3005 3121 82292007 82291891 1.090000e-25 128.0
28 TraesCS6B01G337700 chr6A 90.313 702 48 9 2100 2801 544001775 544002456 0.000000e+00 902.0
29 TraesCS6B01G337700 chr6A 92.971 313 19 3 3055 3364 544002930 544003242 1.580000e-123 453.0
30 TraesCS6B01G337700 chr6A 84.674 261 17 8 2804 3042 544002355 544002614 4.800000e-59 239.0
31 TraesCS6B01G337700 chr1B 97.674 344 8 0 3365 3708 629788828 629789171 3.200000e-165 592.0
32 TraesCS6B01G337700 chr5B 95.833 360 14 1 3364 3722 673415630 673415271 6.930000e-162 580.0
33 TraesCS6B01G337700 chr4B 95.833 360 13 2 3365 3722 7349896 7350255 6.930000e-162 580.0
34 TraesCS6B01G337700 chr4B 95.330 364 15 2 3360 3722 635475481 635475843 8.960000e-161 577.0
35 TraesCS6B01G337700 chr4B 85.714 126 18 0 2996 3121 595705840 595705965 2.330000e-27 134.0
36 TraesCS6B01G337700 chr2D 76.699 309 54 17 1103 1402 23415187 23415486 4.980000e-34 156.0
37 TraesCS6B01G337700 chr2A 76.699 309 54 16 1103 1402 25350420 25350121 4.980000e-34 156.0
38 TraesCS6B01G337700 chr7B 87.597 129 12 2 2996 3121 56921862 56921735 3.000000e-31 147.0
39 TraesCS6B01G337700 chr7A 86.822 129 17 0 2993 3121 653508357 653508485 1.080000e-30 145.0
40 TraesCS6B01G337700 chr1A 83.448 145 15 8 2984 3125 371176731 371176593 3.900000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G337700 chr6B 594662674 594666395 3721 False 2416.000000 6874 99.358667 1 3722 3 chr6B.!!$F2 3721
1 TraesCS6B01G337700 chr6D 313020501 313021345 844 True 1085.000000 1085 89.965000 1 839 1 chr6D.!!$R1 838
2 TraesCS6B01G337700 chr6D 464696109 464696962 853 True 1059.000000 1059 89.265000 1 844 1 chr6D.!!$R2 843
3 TraesCS6B01G337700 chr6D 397648033 397652375 4342 False 575.333333 2329 91.695833 919 3364 6 chr6D.!!$F1 2445
4 TraesCS6B01G337700 chr5D 327474141 327474966 825 True 1083.000000 1083 90.436000 1 821 1 chr5D.!!$R1 820
5 TraesCS6B01G337700 chr2B 510395451 510396294 843 False 1066.000000 1066 89.517000 1 844 1 chr2B.!!$F4 843
6 TraesCS6B01G337700 chr2B 184911055 184911886 831 True 1040.000000 1040 89.367000 1 828 1 chr2B.!!$R2 827
7 TraesCS6B01G337700 chr7D 572313664 572314505 841 True 1057.000000 1057 89.442000 1 836 1 chr7D.!!$R1 835
8 TraesCS6B01G337700 chr7D 381003969 381004814 845 False 1042.000000 1042 89.033000 1 840 1 chr7D.!!$F1 839
9 TraesCS6B01G337700 chr3A 708919349 708920181 832 True 1051.000000 1051 89.581000 1 827 1 chr3A.!!$R1 826
10 TraesCS6B01G337700 chr3B 504647687 504648527 840 False 1031.000000 1031 88.849000 1 840 1 chr3B.!!$F1 839
11 TraesCS6B01G337700 chr6A 544001775 544003242 1467 False 531.333333 902 89.319333 2100 3364 3 chr6A.!!$F1 1264

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
848 874 0.034337 TCTTAACACCCGCACTCCAC 59.966 55.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2760 4134 0.110328 CGCGCGGGAGTACTATGTAG 60.11 60.0 24.84 0.0 0.0 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.294074 GTGTGGGTGTTTAGCAGTTCA 58.706 47.619 0.00 0.00 0.00 3.18
25 26 2.514803 GGTGTTTAGCAGTTCACCCAT 58.485 47.619 9.09 0.00 42.90 4.00
63 64 1.152984 CACAAGGGCTGGTGTGTGA 60.153 57.895 0.00 0.00 43.23 3.58
86 87 0.107643 TTTGCCATCTCGTCCACACA 59.892 50.000 0.00 0.00 0.00 3.72
88 89 1.005037 GCCATCTCGTCCACACACA 60.005 57.895 0.00 0.00 0.00 3.72
122 124 1.064758 ACACCCAAAGCTGTCAGTTGA 60.065 47.619 0.93 0.00 0.00 3.18
229 239 1.550072 GCCATGTGTTTTGCAGGGTAT 59.450 47.619 0.00 0.00 39.69 2.73
233 243 3.128852 TGTGTTTTGCAGGGTATACGT 57.871 42.857 0.00 0.00 0.00 3.57
253 267 1.974957 TCAACTGCCCTAGTGTGCTTA 59.025 47.619 0.00 0.00 40.26 3.09
300 315 2.920490 CCCGAAACATGTTATTTTGCCG 59.080 45.455 12.39 6.99 0.00 5.69
314 329 2.902705 TTGCCGTGTCTCTTTGTAGT 57.097 45.000 0.00 0.00 0.00 2.73
353 368 4.836736 TCTAGTGTTAGTAGGTGGCAACTT 59.163 41.667 11.85 0.00 37.61 2.66
428 445 3.514309 CCTAGTGTTAGTAGGTGGCAACT 59.486 47.826 11.18 11.18 36.69 3.16
575 592 1.394917 GTAGTTCAGCGACATGGCAAG 59.605 52.381 0.00 0.00 34.64 4.01
627 645 0.110295 CCATGACAACTGTGGGGACA 59.890 55.000 0.00 0.00 38.70 4.02
648 666 2.272447 TGATGACTGTCACGCGGGA 61.272 57.895 7.15 7.15 0.00 5.14
693 712 2.203640 AGAGAGGTCGTGTGGGCA 60.204 61.111 0.00 0.00 0.00 5.36
705 724 4.336993 GTCGTGTGGGCATTATCCATTTTA 59.663 41.667 0.00 0.00 36.58 1.52
706 725 5.009610 GTCGTGTGGGCATTATCCATTTTAT 59.990 40.000 0.00 0.00 36.58 1.40
738 759 2.750637 GTGAGAGGGACCGCGAGA 60.751 66.667 8.23 0.00 0.00 4.04
805 831 3.327757 TGTGAGCTGGTCCTCTTAAACAT 59.672 43.478 4.17 0.00 33.02 2.71
828 854 1.398692 ACAAAACGTGTGGCCAGATT 58.601 45.000 5.11 0.00 39.72 2.40
829 855 1.754226 ACAAAACGTGTGGCCAGATTT 59.246 42.857 5.11 0.00 39.72 2.17
840 866 1.743394 GGCCAGATTTCTTAACACCCG 59.257 52.381 0.00 0.00 0.00 5.28
844 870 3.074412 CAGATTTCTTAACACCCGCACT 58.926 45.455 0.00 0.00 0.00 4.40
845 871 3.125316 CAGATTTCTTAACACCCGCACTC 59.875 47.826 0.00 0.00 0.00 3.51
846 872 1.886886 TTTCTTAACACCCGCACTCC 58.113 50.000 0.00 0.00 0.00 3.85
847 873 0.759959 TTCTTAACACCCGCACTCCA 59.240 50.000 0.00 0.00 0.00 3.86
848 874 0.034337 TCTTAACACCCGCACTCCAC 59.966 55.000 0.00 0.00 0.00 4.02
849 875 1.289109 CTTAACACCCGCACTCCACG 61.289 60.000 0.00 0.00 0.00 4.94
850 876 2.030490 TTAACACCCGCACTCCACGT 62.030 55.000 0.00 0.00 0.00 4.49
851 877 2.424705 TAACACCCGCACTCCACGTC 62.425 60.000 0.00 0.00 0.00 4.34
854 880 3.066190 CCCGCACTCCACGTCCTA 61.066 66.667 0.00 0.00 0.00 2.94
855 881 2.642254 CCCGCACTCCACGTCCTAA 61.642 63.158 0.00 0.00 0.00 2.69
856 882 1.290955 CCGCACTCCACGTCCTAAA 59.709 57.895 0.00 0.00 0.00 1.85
857 883 0.320073 CCGCACTCCACGTCCTAAAA 60.320 55.000 0.00 0.00 0.00 1.52
858 884 0.788391 CGCACTCCACGTCCTAAAAC 59.212 55.000 0.00 0.00 0.00 2.43
859 885 1.870580 CGCACTCCACGTCCTAAAACA 60.871 52.381 0.00 0.00 0.00 2.83
860 886 1.798813 GCACTCCACGTCCTAAAACAG 59.201 52.381 0.00 0.00 0.00 3.16
861 887 2.805657 GCACTCCACGTCCTAAAACAGT 60.806 50.000 0.00 0.00 0.00 3.55
862 888 3.553508 GCACTCCACGTCCTAAAACAGTA 60.554 47.826 0.00 0.00 0.00 2.74
863 889 4.624015 CACTCCACGTCCTAAAACAGTAA 58.376 43.478 0.00 0.00 0.00 2.24
864 890 5.235516 CACTCCACGTCCTAAAACAGTAAT 58.764 41.667 0.00 0.00 0.00 1.89
865 891 5.347907 CACTCCACGTCCTAAAACAGTAATC 59.652 44.000 0.00 0.00 0.00 1.75
866 892 4.487948 TCCACGTCCTAAAACAGTAATCG 58.512 43.478 0.00 0.00 0.00 3.34
867 893 4.022068 TCCACGTCCTAAAACAGTAATCGT 60.022 41.667 0.00 0.00 0.00 3.73
868 894 4.687483 CCACGTCCTAAAACAGTAATCGTT 59.313 41.667 0.00 0.00 0.00 3.85
869 895 5.389098 CCACGTCCTAAAACAGTAATCGTTG 60.389 44.000 0.00 0.00 0.00 4.10
870 896 5.403166 CACGTCCTAAAACAGTAATCGTTGA 59.597 40.000 0.00 0.00 0.00 3.18
871 897 5.984926 ACGTCCTAAAACAGTAATCGTTGAA 59.015 36.000 0.00 0.00 0.00 2.69
872 898 6.145048 ACGTCCTAAAACAGTAATCGTTGAAG 59.855 38.462 0.00 0.00 0.00 3.02
873 899 6.304882 GTCCTAAAACAGTAATCGTTGAAGC 58.695 40.000 0.00 0.00 0.00 3.86
874 900 5.410439 TCCTAAAACAGTAATCGTTGAAGCC 59.590 40.000 0.00 0.00 0.00 4.35
875 901 5.180492 CCTAAAACAGTAATCGTTGAAGCCA 59.820 40.000 0.00 0.00 0.00 4.75
876 902 4.483476 AAACAGTAATCGTTGAAGCCAC 57.517 40.909 0.00 0.00 0.00 5.01
877 903 2.066262 ACAGTAATCGTTGAAGCCACG 58.934 47.619 0.00 0.00 0.00 4.94
878 904 2.066262 CAGTAATCGTTGAAGCCACGT 58.934 47.619 0.00 0.00 0.00 4.49
879 905 2.066262 AGTAATCGTTGAAGCCACGTG 58.934 47.619 9.08 9.08 0.00 4.49
880 906 1.127951 GTAATCGTTGAAGCCACGTGG 59.872 52.381 30.66 30.66 38.53 4.94
890 916 3.957260 CCACGTGGCTCTTGTCTG 58.043 61.111 24.02 0.00 0.00 3.51
891 917 2.320587 CCACGTGGCTCTTGTCTGC 61.321 63.158 24.02 0.00 0.00 4.26
892 918 1.301244 CACGTGGCTCTTGTCTGCT 60.301 57.895 7.95 0.00 0.00 4.24
893 919 0.882042 CACGTGGCTCTTGTCTGCTT 60.882 55.000 7.95 0.00 0.00 3.91
894 920 0.601311 ACGTGGCTCTTGTCTGCTTC 60.601 55.000 0.00 0.00 0.00 3.86
895 921 0.601046 CGTGGCTCTTGTCTGCTTCA 60.601 55.000 0.00 0.00 0.00 3.02
896 922 0.871057 GTGGCTCTTGTCTGCTTCAC 59.129 55.000 0.00 0.00 0.00 3.18
897 923 0.601046 TGGCTCTTGTCTGCTTCACG 60.601 55.000 0.00 0.00 0.00 4.35
898 924 0.319900 GGCTCTTGTCTGCTTCACGA 60.320 55.000 0.00 0.00 0.00 4.35
899 925 1.674221 GGCTCTTGTCTGCTTCACGAT 60.674 52.381 0.00 0.00 0.00 3.73
900 926 1.392853 GCTCTTGTCTGCTTCACGATG 59.607 52.381 0.00 0.00 0.00 3.84
901 927 2.928301 GCTCTTGTCTGCTTCACGATGA 60.928 50.000 0.00 0.00 0.00 2.92
902 928 3.519579 CTCTTGTCTGCTTCACGATGAT 58.480 45.455 0.00 0.00 0.00 2.45
903 929 3.930336 TCTTGTCTGCTTCACGATGATT 58.070 40.909 0.00 0.00 0.00 2.57
904 930 3.681417 TCTTGTCTGCTTCACGATGATTG 59.319 43.478 0.00 0.00 0.00 2.67
905 931 3.317603 TGTCTGCTTCACGATGATTGA 57.682 42.857 0.00 0.00 0.00 2.57
906 932 3.865446 TGTCTGCTTCACGATGATTGAT 58.135 40.909 0.00 0.00 0.00 2.57
907 933 5.009854 TGTCTGCTTCACGATGATTGATA 57.990 39.130 0.00 0.00 0.00 2.15
908 934 5.045872 TGTCTGCTTCACGATGATTGATAG 58.954 41.667 0.00 0.00 0.00 2.08
909 935 5.163519 TGTCTGCTTCACGATGATTGATAGA 60.164 40.000 0.00 0.00 0.00 1.98
910 936 5.925397 GTCTGCTTCACGATGATTGATAGAT 59.075 40.000 0.00 0.00 0.00 1.98
911 937 5.924825 TCTGCTTCACGATGATTGATAGATG 59.075 40.000 0.00 0.00 0.00 2.90
912 938 5.604565 TGCTTCACGATGATTGATAGATGT 58.395 37.500 0.00 0.00 0.00 3.06
913 939 5.464389 TGCTTCACGATGATTGATAGATGTG 59.536 40.000 0.00 0.00 0.00 3.21
914 940 5.464722 GCTTCACGATGATTGATAGATGTGT 59.535 40.000 0.00 0.00 0.00 3.72
915 941 6.018425 GCTTCACGATGATTGATAGATGTGTT 60.018 38.462 0.00 0.00 0.00 3.32
916 942 7.466455 GCTTCACGATGATTGATAGATGTGTTT 60.466 37.037 0.00 0.00 0.00 2.83
917 943 7.468922 TCACGATGATTGATAGATGTGTTTC 57.531 36.000 0.00 0.00 0.00 2.78
923 949 6.287525 TGATTGATAGATGTGTTTCGCCATA 58.712 36.000 0.00 0.00 0.00 2.74
925 951 6.544038 TTGATAGATGTGTTTCGCCATATG 57.456 37.500 0.00 0.00 0.00 1.78
926 952 5.610398 TGATAGATGTGTTTCGCCATATGT 58.390 37.500 1.24 0.00 0.00 2.29
927 953 6.754193 TGATAGATGTGTTTCGCCATATGTA 58.246 36.000 1.24 0.00 0.00 2.29
938 964 4.195416 TCGCCATATGTAAAGCATCAACA 58.805 39.130 1.24 0.00 38.94 3.33
939 965 4.273235 TCGCCATATGTAAAGCATCAACAG 59.727 41.667 1.24 0.00 38.94 3.16
1003 1030 2.045280 CTCCCGGAGTCTAGCATGG 58.955 63.158 0.73 0.00 0.00 3.66
1006 1033 0.319728 CCCGGAGTCTAGCATGGATG 59.680 60.000 0.73 0.00 0.00 3.51
1014 1041 3.821600 AGTCTAGCATGGATGGTACTACG 59.178 47.826 0.00 0.00 39.52 3.51
1017 1044 3.179443 AGCATGGATGGTACTACGTTG 57.821 47.619 0.00 0.00 36.64 4.10
1018 1045 1.597663 GCATGGATGGTACTACGTTGC 59.402 52.381 0.00 0.00 0.00 4.17
1019 1046 1.858458 CATGGATGGTACTACGTTGCG 59.142 52.381 0.00 0.00 0.00 4.85
1020 1047 0.458889 TGGATGGTACTACGTTGCGC 60.459 55.000 0.00 0.00 0.00 6.09
1022 1049 2.074339 GATGGTACTACGTTGCGCGC 62.074 60.000 27.26 27.26 46.11 6.86
1023 1050 3.548231 GGTACTACGTTGCGCGCC 61.548 66.667 30.77 13.55 46.11 6.53
1048 1075 1.889530 CTTGGTCACCGTCCTCCTCC 61.890 65.000 0.00 0.00 0.00 4.30
1062 1089 3.052082 CTCCTGGCGCCACTGTTG 61.052 66.667 29.03 16.07 0.00 3.33
1086 1113 3.215606 GATGCATCGACGAAGCGGC 62.216 63.158 18.89 12.57 0.00 6.53
1088 1115 3.918220 GCATCGACGAAGCGGCAG 61.918 66.667 9.51 0.00 32.52 4.85
1089 1116 3.918220 CATCGACGAAGCGGCAGC 61.918 66.667 0.00 0.00 45.58 5.25
1251 1278 2.502080 GTGCTCGTCGTGTCCTCG 60.502 66.667 0.00 0.00 0.00 4.63
1338 1365 0.115349 CCGGTGGGATCCTCTCCTAT 59.885 60.000 12.58 0.00 44.28 2.57
1374 1401 2.850130 ACCACCAACTACGGGCCA 60.850 61.111 4.39 0.00 0.00 5.36
1558 1585 2.264166 GCCTGTTCGAGCTGCTCT 59.736 61.111 25.59 0.00 0.00 4.09
1647 1682 4.200283 GTGAGAGAGGAGGCGCGG 62.200 72.222 8.83 0.00 0.00 6.46
1670 1705 1.274703 TTCAGGGAGATGGTGGAGGC 61.275 60.000 0.00 0.00 0.00 4.70
1680 1715 4.451150 GTGGAGGCGGCGATGACA 62.451 66.667 12.98 0.00 0.00 3.58
1683 1718 2.887568 GAGGCGGCGATGACACTG 60.888 66.667 12.98 0.00 0.00 3.66
1689 1724 2.125912 GCGATGACACTGAGCGGT 60.126 61.111 0.00 0.00 0.00 5.68
1712 1747 2.571216 CGACGGTGTGGGACTTCCT 61.571 63.158 0.00 0.00 36.20 3.36
1713 1748 1.004918 GACGGTGTGGGACTTCCTG 60.005 63.158 0.00 0.00 36.20 3.86
1714 1749 2.358737 CGGTGTGGGACTTCCTGC 60.359 66.667 0.00 0.00 36.20 4.85
1715 1750 2.034221 GGTGTGGGACTTCCTGCC 59.966 66.667 0.00 0.00 36.20 4.85
1716 1751 2.358737 GTGTGGGACTTCCTGCCG 60.359 66.667 0.00 0.00 36.20 5.69
1717 1752 3.636231 TGTGGGACTTCCTGCCGG 61.636 66.667 0.00 0.00 36.20 6.13
1817 1852 3.838271 GCAGGGGCTGATCGACGA 61.838 66.667 0.00 0.00 36.96 4.20
1835 1870 1.680522 GAGCAGCGGAAGGAGATGGA 61.681 60.000 0.00 0.00 0.00 3.41
1842 1877 1.135960 GGAAGGAGATGGAGAAGGGG 58.864 60.000 0.00 0.00 0.00 4.79
1862 1897 2.226149 GAGGAGGGACGGAGGAGGAA 62.226 65.000 0.00 0.00 0.00 3.36
1872 1907 0.972883 GGAGGAGGAAGATGATCGGG 59.027 60.000 0.00 0.00 0.00 5.14
1951 1986 2.899900 TCCTTGTGCATAGTGAGTGAGT 59.100 45.455 0.00 0.00 0.00 3.41
1971 2010 4.012374 AGTCATCAATCACCATTGTCCAC 58.988 43.478 0.00 0.00 40.47 4.02
2009 2048 1.398692 TGGCTTGCTTCCTTCGTTTT 58.601 45.000 0.00 0.00 0.00 2.43
2015 2054 3.194005 TGCTTCCTTCGTTTTCTCACT 57.806 42.857 0.00 0.00 0.00 3.41
2036 2075 0.249238 CGATCCCAAGAGCTCCTTCG 60.249 60.000 10.93 6.63 31.42 3.79
2143 2182 2.753966 GCAGATGGACGCGTGCATT 61.754 57.895 40.14 27.99 41.80 3.56
2153 2192 1.210155 GCGTGCATTGGAGAACCAC 59.790 57.895 0.00 0.00 46.80 4.16
2154 2193 1.237285 GCGTGCATTGGAGAACCACT 61.237 55.000 0.00 0.00 46.80 4.00
2155 2194 0.518636 CGTGCATTGGAGAACCACTG 59.481 55.000 0.00 0.00 46.80 3.66
2332 2378 2.127758 CTCGTCAACGCGTTTGCC 60.128 61.111 24.21 11.81 39.60 4.52
2353 2399 0.689080 TCCACAGGGATCCTCAGCTC 60.689 60.000 12.58 0.00 38.64 4.09
2378 2424 1.388547 TGAACCAGCAAGCTTCGTTT 58.611 45.000 0.00 0.00 0.00 3.60
2380 2426 0.668535 AACCAGCAAGCTTCGTTTCC 59.331 50.000 0.00 0.00 0.00 3.13
2429 2475 4.054671 GGCAGATGTAGTGATGCTAACTC 58.945 47.826 0.00 0.00 38.71 3.01
2438 2484 6.591448 TGTAGTGATGCTAACTCAATCTTGTG 59.409 38.462 0.00 0.00 0.00 3.33
2443 2489 4.960938 TGCTAACTCAATCTTGTGTCTGT 58.039 39.130 0.00 0.00 34.18 3.41
2444 2490 4.751600 TGCTAACTCAATCTTGTGTCTGTG 59.248 41.667 0.00 0.00 34.18 3.66
2696 4070 3.105659 GCCTCGAGCTTCAATGGC 58.894 61.111 6.99 0.00 38.99 4.40
2707 4081 3.946558 AGCTTCAATGGCTCTTCATCTTC 59.053 43.478 0.00 0.00 34.70 2.87
2710 4084 2.577563 TCAATGGCTCTTCATCTTCCCA 59.422 45.455 0.00 0.00 0.00 4.37
2722 4096 7.309091 TCTTCATCTTCCCAGGATAGAGTAAT 58.691 38.462 0.00 0.00 0.00 1.89
2724 4098 7.308450 TCATCTTCCCAGGATAGAGTAATTG 57.692 40.000 0.00 0.00 0.00 2.32
2727 4101 6.889198 TCTTCCCAGGATAGAGTAATTGTTG 58.111 40.000 0.00 0.00 0.00 3.33
2730 4104 6.414732 TCCCAGGATAGAGTAATTGTTGTTG 58.585 40.000 0.00 0.00 0.00 3.33
2733 4107 6.655003 CCAGGATAGAGTAATTGTTGTTGTGT 59.345 38.462 0.00 0.00 0.00 3.72
2734 4108 7.822334 CCAGGATAGAGTAATTGTTGTTGTGTA 59.178 37.037 0.00 0.00 0.00 2.90
2735 4109 9.214957 CAGGATAGAGTAATTGTTGTTGTGTAA 57.785 33.333 0.00 0.00 0.00 2.41
2736 4110 9.959721 AGGATAGAGTAATTGTTGTTGTGTAAT 57.040 29.630 0.00 0.00 0.00 1.89
2764 4138 8.856153 ATACATGGTTGTTTCATTGTACTACA 57.144 30.769 0.00 0.00 37.28 2.74
2765 4139 7.759489 ACATGGTTGTTTCATTGTACTACAT 57.241 32.000 0.00 0.00 29.55 2.29
2766 4140 8.856153 ACATGGTTGTTTCATTGTACTACATA 57.144 30.769 0.00 0.00 29.55 2.29
2767 4141 8.946085 ACATGGTTGTTTCATTGTACTACATAG 58.054 33.333 0.00 0.00 29.55 2.23
2768 4142 8.946085 CATGGTTGTTTCATTGTACTACATAGT 58.054 33.333 0.00 0.00 40.24 2.12
2778 4152 0.950116 ACTACATAGTACTCCCGCGC 59.050 55.000 0.00 0.00 34.13 6.86
2779 4153 0.110328 CTACATAGTACTCCCGCGCG 60.110 60.000 25.67 25.67 0.00 6.86
2780 4154 0.815213 TACATAGTACTCCCGCGCGT 60.815 55.000 29.95 12.94 0.00 6.01
2781 4155 1.065273 CATAGTACTCCCGCGCGTT 59.935 57.895 29.95 12.27 0.00 4.84
2782 4156 1.065273 ATAGTACTCCCGCGCGTTG 59.935 57.895 29.95 19.43 0.00 4.10
2783 4157 1.378882 ATAGTACTCCCGCGCGTTGA 61.379 55.000 29.95 22.59 0.00 3.18
2784 4158 1.378882 TAGTACTCCCGCGCGTTGAT 61.379 55.000 29.95 13.89 0.00 2.57
2785 4159 2.202690 TACTCCCGCGCGTTGATG 60.203 61.111 29.95 18.40 0.00 3.07
2789 4163 4.817063 CCCGCGCGTTGATGCAAG 62.817 66.667 29.95 9.60 34.15 4.01
2790 4164 3.787676 CCGCGCGTTGATGCAAGA 61.788 61.111 29.95 0.00 34.15 3.02
2791 4165 2.173141 CGCGCGTTGATGCAAGAA 59.827 55.556 24.19 0.00 34.15 2.52
2792 4166 1.226101 CGCGCGTTGATGCAAGAAT 60.226 52.632 24.19 0.00 34.15 2.40
2793 4167 0.794229 CGCGCGTTGATGCAAGAATT 60.794 50.000 24.19 0.00 34.15 2.17
2794 4168 1.339711 GCGCGTTGATGCAAGAATTT 58.660 45.000 8.43 0.00 34.15 1.82
2795 4169 1.720852 GCGCGTTGATGCAAGAATTTT 59.279 42.857 8.43 0.00 34.15 1.82
2796 4170 2.155539 GCGCGTTGATGCAAGAATTTTT 59.844 40.909 8.43 0.00 34.15 1.94
2797 4171 3.363426 GCGCGTTGATGCAAGAATTTTTA 59.637 39.130 8.43 0.00 34.15 1.52
2798 4172 4.489206 GCGCGTTGATGCAAGAATTTTTAG 60.489 41.667 8.43 0.00 34.15 1.85
2799 4173 4.489206 CGCGTTGATGCAAGAATTTTTAGC 60.489 41.667 0.00 0.00 34.15 3.09
2800 4174 4.385447 GCGTTGATGCAAGAATTTTTAGCA 59.615 37.500 0.00 7.80 39.79 3.49
2811 4185 8.805688 GCAAGAATTTTTAGCATCTTCATCTTC 58.194 33.333 0.00 0.00 30.01 2.87
2814 4188 7.616935 AGAATTTTTAGCATCTTCATCTTCCCA 59.383 33.333 0.00 0.00 0.00 4.37
2899 4273 1.720852 GCGCGTTGATGCAAGAATTTT 59.279 42.857 8.43 0.00 34.15 1.82
2975 4371 4.674281 GGTAGCAGACCTAGCACTAAAT 57.326 45.455 0.63 0.00 45.89 1.40
3186 5255 8.614469 GAGAATCTGGGAGTATTTATTTCTGG 57.386 38.462 0.00 0.00 0.00 3.86
3200 5269 1.608055 TTCTGGTGGACAAGTGCATG 58.392 50.000 0.00 0.00 32.40 4.06
3214 5283 4.277515 AGTGCATGAAAAGCTACTCTCA 57.722 40.909 0.00 0.00 0.00 3.27
3293 5627 9.890629 TGTAGTAGCACTCATCTTTATTTTCAT 57.109 29.630 0.00 0.00 0.00 2.57
3378 5712 5.967088 GCAGGATGACACTAGTAGAAAAGA 58.033 41.667 3.59 0.00 39.69 2.52
3379 5713 6.039616 GCAGGATGACACTAGTAGAAAAGAG 58.960 44.000 3.59 0.00 39.69 2.85
3380 5714 6.568869 CAGGATGACACTAGTAGAAAAGAGG 58.431 44.000 3.59 0.00 39.69 3.69
3381 5715 5.659079 AGGATGACACTAGTAGAAAAGAGGG 59.341 44.000 3.59 0.00 0.00 4.30
3382 5716 4.803098 TGACACTAGTAGAAAAGAGGGC 57.197 45.455 3.59 0.00 0.00 5.19
3383 5717 4.417437 TGACACTAGTAGAAAAGAGGGCT 58.583 43.478 3.59 0.00 0.00 5.19
3384 5718 4.838986 TGACACTAGTAGAAAAGAGGGCTT 59.161 41.667 3.59 0.00 35.37 4.35
3385 5719 5.307196 TGACACTAGTAGAAAAGAGGGCTTT 59.693 40.000 3.59 0.00 45.95 3.51
3386 5720 5.552178 ACACTAGTAGAAAAGAGGGCTTTG 58.448 41.667 3.59 0.00 43.32 2.77
3387 5721 4.938226 CACTAGTAGAAAAGAGGGCTTTGG 59.062 45.833 3.59 0.00 43.32 3.28
3388 5722 4.597940 ACTAGTAGAAAAGAGGGCTTTGGT 59.402 41.667 3.59 0.00 43.32 3.67
3389 5723 4.022413 AGTAGAAAAGAGGGCTTTGGTC 57.978 45.455 0.00 0.00 43.32 4.02
3390 5724 2.294449 AGAAAAGAGGGCTTTGGTCC 57.706 50.000 0.00 0.00 43.32 4.46
3391 5725 1.499007 AGAAAAGAGGGCTTTGGTCCA 59.501 47.619 0.00 0.00 43.32 4.02
3392 5726 1.613925 GAAAAGAGGGCTTTGGTCCAC 59.386 52.381 0.00 0.00 43.32 4.02
3393 5727 0.178961 AAAGAGGGCTTTGGTCCACC 60.179 55.000 0.00 0.00 42.54 4.61
3394 5728 2.035783 GAGGGCTTTGGTCCACCC 59.964 66.667 7.82 7.82 40.27 4.61
3396 5730 2.283173 GGGCTTTGGTCCACCCTG 60.283 66.667 8.54 0.00 39.42 4.45
3397 5731 2.283173 GGCTTTGGTCCACCCTGG 60.283 66.667 0.00 0.00 39.43 4.45
3398 5732 2.283173 GCTTTGGTCCACCCTGGG 60.283 66.667 12.28 12.28 38.32 4.45
3399 5733 3.146828 GCTTTGGTCCACCCTGGGT 62.147 63.158 14.05 14.05 38.32 4.51
3400 5734 1.541672 CTTTGGTCCACCCTGGGTT 59.458 57.895 17.76 0.00 38.32 4.11
3401 5735 0.774908 CTTTGGTCCACCCTGGGTTA 59.225 55.000 17.76 4.36 38.32 2.85
3402 5736 0.774908 TTTGGTCCACCCTGGGTTAG 59.225 55.000 17.76 11.16 38.32 2.34
3403 5737 1.785353 TTGGTCCACCCTGGGTTAGC 61.785 60.000 17.76 17.05 38.32 3.09
3404 5738 2.675371 GTCCACCCTGGGTTAGCC 59.325 66.667 17.76 0.00 38.32 3.93
3415 5749 3.700198 GGTTAGCCCATTAGTCCCG 57.300 57.895 0.00 0.00 0.00 5.14
3416 5750 0.108019 GGTTAGCCCATTAGTCCCGG 59.892 60.000 0.00 0.00 0.00 5.73
3417 5751 0.835276 GTTAGCCCATTAGTCCCGGT 59.165 55.000 0.00 0.00 0.00 5.28
3418 5752 1.211212 GTTAGCCCATTAGTCCCGGTT 59.789 52.381 0.00 0.00 0.00 4.44
3419 5753 1.125633 TAGCCCATTAGTCCCGGTTC 58.874 55.000 0.00 0.00 0.00 3.62
3420 5754 0.912487 AGCCCATTAGTCCCGGTTCA 60.912 55.000 0.00 0.00 0.00 3.18
3421 5755 0.463833 GCCCATTAGTCCCGGTTCAG 60.464 60.000 0.00 0.00 0.00 3.02
3422 5756 0.909623 CCCATTAGTCCCGGTTCAGT 59.090 55.000 0.00 0.00 0.00 3.41
3423 5757 1.134491 CCCATTAGTCCCGGTTCAGTC 60.134 57.143 0.00 0.00 0.00 3.51
3424 5758 1.831736 CCATTAGTCCCGGTTCAGTCT 59.168 52.381 0.00 0.00 0.00 3.24
3425 5759 3.028850 CCATTAGTCCCGGTTCAGTCTA 58.971 50.000 0.00 0.00 0.00 2.59
3426 5760 3.068307 CCATTAGTCCCGGTTCAGTCTAG 59.932 52.174 0.00 0.00 0.00 2.43
3427 5761 3.726557 TTAGTCCCGGTTCAGTCTAGA 57.273 47.619 0.00 0.00 0.00 2.43
3428 5762 2.599408 AGTCCCGGTTCAGTCTAGAA 57.401 50.000 0.00 0.00 0.00 2.10
3429 5763 2.169330 AGTCCCGGTTCAGTCTAGAAC 58.831 52.381 0.00 0.00 45.50 3.01
3435 5769 2.651135 GTTCAGTCTAGAACCGGGAC 57.349 55.000 6.32 2.53 41.52 4.46
3436 5770 2.169330 GTTCAGTCTAGAACCGGGACT 58.831 52.381 6.32 5.31 41.52 3.85
3437 5771 3.350833 GTTCAGTCTAGAACCGGGACTA 58.649 50.000 6.32 8.06 41.52 2.59
3438 5772 3.726557 TCAGTCTAGAACCGGGACTAA 57.273 47.619 6.32 0.00 38.12 2.24
3439 5773 4.246712 TCAGTCTAGAACCGGGACTAAT 57.753 45.455 6.32 0.00 38.12 1.73
3440 5774 3.952323 TCAGTCTAGAACCGGGACTAATG 59.048 47.826 6.32 8.07 38.12 1.90
3441 5775 3.068307 CAGTCTAGAACCGGGACTAATGG 59.932 52.174 6.32 0.00 38.12 3.16
3442 5776 2.364647 GTCTAGAACCGGGACTAATGGG 59.635 54.545 6.32 0.00 0.00 4.00
3443 5777 1.692519 CTAGAACCGGGACTAATGGGG 59.307 57.143 6.32 0.00 0.00 4.96
3444 5778 0.986550 AGAACCGGGACTAATGGGGG 60.987 60.000 6.32 0.00 0.00 5.40
3445 5779 2.619941 GAACCGGGACTAATGGGGGC 62.620 65.000 6.32 0.00 0.00 5.80
3446 5780 3.093835 CCGGGACTAATGGGGGCA 61.094 66.667 0.00 0.00 0.00 5.36
3447 5781 2.460853 CCGGGACTAATGGGGGCAT 61.461 63.158 0.00 0.00 0.00 4.40
3448 5782 1.536676 CGGGACTAATGGGGGCATT 59.463 57.895 0.00 0.00 0.00 3.56
3449 5783 0.768622 CGGGACTAATGGGGGCATTA 59.231 55.000 0.00 0.00 0.00 1.90
3450 5784 1.271379 CGGGACTAATGGGGGCATTAG 60.271 57.143 2.11 2.11 45.68 1.73
3459 5793 4.553668 GGGCATTAGTCCCGGTTC 57.446 61.111 0.00 0.00 33.43 3.62
3460 5794 1.523032 GGGCATTAGTCCCGGTTCG 60.523 63.158 0.00 0.00 33.43 3.95
3461 5795 1.219935 GGCATTAGTCCCGGTTCGT 59.780 57.895 0.00 0.00 0.00 3.85
3462 5796 1.087771 GGCATTAGTCCCGGTTCGTG 61.088 60.000 0.00 0.00 0.00 4.35
3463 5797 1.702491 GCATTAGTCCCGGTTCGTGC 61.702 60.000 0.00 0.00 0.00 5.34
3464 5798 1.153706 ATTAGTCCCGGTTCGTGCG 60.154 57.895 0.00 0.00 0.00 5.34
3465 5799 3.919973 TTAGTCCCGGTTCGTGCGC 62.920 63.158 0.00 0.00 0.00 6.09
3471 5805 3.777925 CGGTTCGTGCGCCAAGAG 61.778 66.667 4.18 0.00 0.00 2.85
3472 5806 3.423154 GGTTCGTGCGCCAAGAGG 61.423 66.667 4.18 0.00 38.23 3.69
3490 5824 2.961768 CCACGTGGGCCATTTGTC 59.038 61.111 27.57 0.00 0.00 3.18
3491 5825 2.635443 CCACGTGGGCCATTTGTCC 61.635 63.158 27.57 0.00 0.00 4.02
3492 5826 2.282887 ACGTGGGCCATTTGTCCC 60.283 61.111 10.70 0.00 42.93 4.46
3493 5827 3.439540 CGTGGGCCATTTGTCCCG 61.440 66.667 10.70 2.04 45.60 5.14
3494 5828 3.068064 GTGGGCCATTTGTCCCGG 61.068 66.667 10.70 0.00 45.60 5.73
3495 5829 3.585428 TGGGCCATTTGTCCCGGT 61.585 61.111 0.00 0.00 45.60 5.28
3496 5830 2.283604 GGGCCATTTGTCCCGGTT 60.284 61.111 4.39 0.00 32.00 4.44
3497 5831 2.348104 GGGCCATTTGTCCCGGTTC 61.348 63.158 4.39 0.00 32.00 3.62
3498 5832 2.696759 GGCCATTTGTCCCGGTTCG 61.697 63.158 0.00 0.00 0.00 3.95
3499 5833 1.969589 GCCATTTGTCCCGGTTCGT 60.970 57.895 0.00 0.00 0.00 3.85
3500 5834 1.918868 GCCATTTGTCCCGGTTCGTC 61.919 60.000 0.00 0.00 0.00 4.20
3501 5835 0.321298 CCATTTGTCCCGGTTCGTCT 60.321 55.000 0.00 0.00 0.00 4.18
3502 5836 0.796312 CATTTGTCCCGGTTCGTCTG 59.204 55.000 0.00 0.00 0.00 3.51
3503 5837 0.321298 ATTTGTCCCGGTTCGTCTGG 60.321 55.000 0.00 2.18 42.06 3.86
3504 5838 1.401318 TTTGTCCCGGTTCGTCTGGA 61.401 55.000 0.00 0.00 45.09 3.86
3505 5839 2.091102 TTGTCCCGGTTCGTCTGGAC 62.091 60.000 0.00 0.00 45.09 4.02
3506 5840 2.993264 TCCCGGTTCGTCTGGACC 60.993 66.667 0.00 0.00 45.09 4.46
3507 5841 2.995574 CCCGGTTCGTCTGGACCT 60.996 66.667 0.00 0.00 45.09 3.85
3508 5842 2.580601 CCCGGTTCGTCTGGACCTT 61.581 63.158 0.00 0.00 45.09 3.50
3509 5843 1.370064 CCGGTTCGTCTGGACCTTT 59.630 57.895 0.00 0.00 45.09 3.11
3510 5844 0.250166 CCGGTTCGTCTGGACCTTTT 60.250 55.000 0.00 0.00 45.09 2.27
3511 5845 1.001181 CCGGTTCGTCTGGACCTTTTA 59.999 52.381 0.00 0.00 45.09 1.52
3512 5846 2.334838 CGGTTCGTCTGGACCTTTTAG 58.665 52.381 0.00 0.00 0.00 1.85
3513 5847 2.288640 CGGTTCGTCTGGACCTTTTAGT 60.289 50.000 0.00 0.00 0.00 2.24
3514 5848 3.324117 GGTTCGTCTGGACCTTTTAGTC 58.676 50.000 0.00 0.00 35.95 2.59
3522 5856 1.817357 GACCTTTTAGTCCCGGTTGG 58.183 55.000 0.00 0.00 0.00 3.77
3523 5857 1.072806 GACCTTTTAGTCCCGGTTGGT 59.927 52.381 0.00 0.00 34.77 3.67
3524 5858 1.202842 ACCTTTTAGTCCCGGTTGGTG 60.203 52.381 0.00 0.00 34.77 4.17
3525 5859 0.879090 CTTTTAGTCCCGGTTGGTGC 59.121 55.000 0.00 0.00 34.77 5.01
3526 5860 0.537828 TTTTAGTCCCGGTTGGTGCC 60.538 55.000 0.00 0.00 34.77 5.01
3527 5861 1.706995 TTTAGTCCCGGTTGGTGCCA 61.707 55.000 0.00 0.00 34.77 4.92
3528 5862 2.400269 TTAGTCCCGGTTGGTGCCAC 62.400 60.000 0.00 0.00 34.77 5.01
3531 5865 4.939368 CCCGGTTGGTGCCACGAA 62.939 66.667 0.00 0.00 0.00 3.85
3532 5866 3.656045 CCGGTTGGTGCCACGAAC 61.656 66.667 13.59 13.59 36.30 3.95
3534 5868 3.656045 GGTTGGTGCCACGAACCG 61.656 66.667 23.24 0.00 44.79 4.44
3535 5869 3.656045 GTTGGTGCCACGAACCGG 61.656 66.667 11.21 0.00 40.86 5.28
3536 5870 4.939368 TTGGTGCCACGAACCGGG 62.939 66.667 6.32 0.00 40.86 5.73
3539 5873 4.309950 GTGCCACGAACCGGGACT 62.310 66.667 6.32 0.00 41.35 3.85
3540 5874 2.601067 TGCCACGAACCGGGACTA 60.601 61.111 6.32 0.00 28.17 2.59
3541 5875 2.208619 TGCCACGAACCGGGACTAA 61.209 57.895 6.32 0.00 28.17 2.24
3542 5876 1.004679 GCCACGAACCGGGACTAAA 60.005 57.895 6.32 0.00 28.17 1.85
3543 5877 1.017701 GCCACGAACCGGGACTAAAG 61.018 60.000 6.32 0.00 28.17 1.85
3544 5878 0.390735 CCACGAACCGGGACTAAAGG 60.391 60.000 6.32 0.00 28.17 3.11
3545 5879 0.390735 CACGAACCGGGACTAAAGGG 60.391 60.000 6.32 0.00 28.17 3.95
3546 5880 0.833409 ACGAACCGGGACTAAAGGGT 60.833 55.000 6.32 0.00 0.00 4.34
3547 5881 0.390735 CGAACCGGGACTAAAGGGTG 60.391 60.000 6.32 0.00 31.96 4.61
3548 5882 0.675837 GAACCGGGACTAAAGGGTGC 60.676 60.000 6.32 0.00 31.96 5.01
3549 5883 2.125269 CCGGGACTAAAGGGTGCG 60.125 66.667 0.00 0.00 0.00 5.34
3550 5884 2.652095 CCGGGACTAAAGGGTGCGA 61.652 63.158 0.00 0.00 0.00 5.10
3551 5885 1.520666 CGGGACTAAAGGGTGCGAT 59.479 57.895 0.00 0.00 0.00 4.58
3552 5886 0.810031 CGGGACTAAAGGGTGCGATG 60.810 60.000 0.00 0.00 0.00 3.84
3553 5887 1.095807 GGGACTAAAGGGTGCGATGC 61.096 60.000 0.00 0.00 0.00 3.91
3554 5888 1.095807 GGACTAAAGGGTGCGATGCC 61.096 60.000 0.00 0.00 0.00 4.40
3555 5889 1.077716 ACTAAAGGGTGCGATGCCC 60.078 57.895 1.67 1.67 46.43 5.36
3560 5894 3.749981 GGGTGCGATGCCCATTAG 58.250 61.111 4.76 0.00 45.40 1.73
3561 5895 1.152963 GGGTGCGATGCCCATTAGT 60.153 57.895 4.76 0.00 45.40 2.24
3562 5896 1.166531 GGGTGCGATGCCCATTAGTC 61.167 60.000 4.76 0.00 45.40 2.59
3563 5897 1.166531 GGTGCGATGCCCATTAGTCC 61.167 60.000 0.00 0.00 0.00 3.85
3564 5898 1.148273 TGCGATGCCCATTAGTCCC 59.852 57.895 0.00 0.00 0.00 4.46
3565 5899 1.961277 GCGATGCCCATTAGTCCCG 60.961 63.158 0.00 0.00 0.00 5.14
3566 5900 1.301716 CGATGCCCATTAGTCCCGG 60.302 63.158 0.00 0.00 0.00 5.73
3567 5901 1.837090 GATGCCCATTAGTCCCGGT 59.163 57.895 0.00 0.00 0.00 5.28
3568 5902 0.182775 GATGCCCATTAGTCCCGGTT 59.817 55.000 0.00 0.00 0.00 4.44
3569 5903 0.182775 ATGCCCATTAGTCCCGGTTC 59.817 55.000 0.00 0.00 0.00 3.62
3570 5904 1.523032 GCCCATTAGTCCCGGTTCG 60.523 63.158 0.00 0.00 0.00 3.95
3571 5905 1.902556 CCCATTAGTCCCGGTTCGT 59.097 57.895 0.00 0.00 0.00 3.85
3572 5906 0.461339 CCCATTAGTCCCGGTTCGTG 60.461 60.000 0.00 0.00 0.00 4.35
3573 5907 0.461339 CCATTAGTCCCGGTTCGTGG 60.461 60.000 0.00 0.00 0.00 4.94
3574 5908 1.087771 CATTAGTCCCGGTTCGTGGC 61.088 60.000 0.00 0.00 0.00 5.01
3575 5909 1.546589 ATTAGTCCCGGTTCGTGGCA 61.547 55.000 0.00 0.00 0.00 4.92
3576 5910 2.438951 TTAGTCCCGGTTCGTGGCAC 62.439 60.000 7.79 7.79 0.00 5.01
3579 5913 4.939368 CCCGGTTCGTGGCACCAA 62.939 66.667 12.86 1.99 33.36 3.67
3580 5914 3.656045 CCGGTTCGTGGCACCAAC 61.656 66.667 18.22 18.22 33.36 3.77
3581 5915 3.656045 CGGTTCGTGGCACCAACC 61.656 66.667 30.06 30.06 36.91 3.77
3582 5916 3.656045 GGTTCGTGGCACCAACCG 61.656 66.667 27.29 9.64 34.04 4.44
3583 5917 3.656045 GTTCGTGGCACCAACCGG 61.656 66.667 16.03 0.00 38.77 5.28
3584 5918 4.939368 TTCGTGGCACCAACCGGG 62.939 66.667 12.86 0.00 44.81 5.73
3587 5921 4.265056 GTGGCACCAACCGGGACT 62.265 66.667 6.32 0.00 41.15 3.85
3588 5922 2.527123 TGGCACCAACCGGGACTA 60.527 61.111 6.32 0.00 41.15 2.59
3589 5923 2.148052 TGGCACCAACCGGGACTAA 61.148 57.895 6.32 0.00 41.15 2.24
3590 5924 1.073548 GGCACCAACCGGGACTAAA 59.926 57.895 6.32 0.00 41.15 1.85
3591 5925 0.958876 GGCACCAACCGGGACTAAAG 60.959 60.000 6.32 0.00 41.15 1.85
3592 5926 0.250597 GCACCAACCGGGACTAAAGT 60.251 55.000 6.32 0.00 41.15 2.66
3593 5927 1.519408 CACCAACCGGGACTAAAGTG 58.481 55.000 6.32 0.00 41.15 3.16
3594 5928 1.134228 ACCAACCGGGACTAAAGTGT 58.866 50.000 6.32 0.00 41.15 3.55
3595 5929 1.491754 ACCAACCGGGACTAAAGTGTT 59.508 47.619 6.32 0.00 41.15 3.32
3596 5930 2.705127 ACCAACCGGGACTAAAGTGTTA 59.295 45.455 6.32 0.00 41.15 2.41
3597 5931 3.328637 ACCAACCGGGACTAAAGTGTTAT 59.671 43.478 6.32 0.00 41.15 1.89
3598 5932 4.531732 ACCAACCGGGACTAAAGTGTTATA 59.468 41.667 6.32 0.00 41.15 0.98
3599 5933 4.872124 CCAACCGGGACTAAAGTGTTATAC 59.128 45.833 6.32 0.00 40.01 1.47
3600 5934 4.743057 ACCGGGACTAAAGTGTTATACC 57.257 45.455 6.32 0.00 0.00 2.73
3601 5935 4.356436 ACCGGGACTAAAGTGTTATACCT 58.644 43.478 6.32 0.00 0.00 3.08
3602 5936 4.779489 ACCGGGACTAAAGTGTTATACCTT 59.221 41.667 6.32 0.00 0.00 3.50
3603 5937 5.249163 ACCGGGACTAAAGTGTTATACCTTT 59.751 40.000 6.32 0.00 0.00 3.11
3604 5938 6.440328 ACCGGGACTAAAGTGTTATACCTTTA 59.560 38.462 6.32 0.00 0.00 1.85
3605 5939 6.982724 CCGGGACTAAAGTGTTATACCTTTAG 59.017 42.308 16.73 16.73 42.08 1.85
3610 5944 7.550712 ACTAAAGTGTTATACCTTTAGTCCCG 58.449 38.462 17.57 4.43 44.39 5.14
3611 5945 5.349061 AAGTGTTATACCTTTAGTCCCGG 57.651 43.478 0.00 0.00 0.00 5.73
3612 5946 4.356436 AGTGTTATACCTTTAGTCCCGGT 58.644 43.478 0.00 0.00 34.86 5.28
3613 5947 4.779489 AGTGTTATACCTTTAGTCCCGGTT 59.221 41.667 0.00 0.00 32.36 4.44
3614 5948 5.105187 AGTGTTATACCTTTAGTCCCGGTTC 60.105 44.000 0.00 0.00 32.36 3.62
3615 5949 4.142182 TGTTATACCTTTAGTCCCGGTTCG 60.142 45.833 0.00 0.00 32.36 3.95
3616 5950 1.923356 TACCTTTAGTCCCGGTTCGT 58.077 50.000 0.00 0.00 32.36 3.85
3617 5951 0.319405 ACCTTTAGTCCCGGTTCGTG 59.681 55.000 0.00 0.00 0.00 4.35
3618 5952 1.017701 CCTTTAGTCCCGGTTCGTGC 61.018 60.000 0.00 0.00 0.00 5.34
3619 5953 1.004679 TTTAGTCCCGGTTCGTGCC 60.005 57.895 0.00 0.00 0.00 5.01
3620 5954 1.756408 TTTAGTCCCGGTTCGTGCCA 61.756 55.000 0.00 0.00 0.00 4.92
3621 5955 2.438951 TTAGTCCCGGTTCGTGCCAC 62.439 60.000 0.00 0.00 0.00 5.01
3624 5958 4.939368 CCCGGTTCGTGCCACCAA 62.939 66.667 0.00 0.00 33.36 3.67
3625 5959 3.656045 CCGGTTCGTGCCACCAAC 61.656 66.667 0.00 0.00 33.36 3.77
3626 5960 3.656045 CGGTTCGTGCCACCAACC 61.656 66.667 13.66 13.66 36.91 3.77
3627 5961 3.656045 GGTTCGTGCCACCAACCG 61.656 66.667 8.63 0.00 34.04 4.44
3628 5962 3.656045 GTTCGTGCCACCAACCGG 61.656 66.667 0.00 0.00 38.77 5.28
3630 5964 2.804912 TTCGTGCCACCAACCGGTA 61.805 57.895 8.00 0.00 46.94 4.02
3631 5965 2.992607 TTCGTGCCACCAACCGGTAC 62.993 60.000 8.00 0.00 46.94 3.34
3632 5966 2.428622 GTGCCACCAACCGGTACT 59.571 61.111 8.00 0.00 46.94 2.73
3633 5967 1.672898 GTGCCACCAACCGGTACTA 59.327 57.895 8.00 0.00 46.94 1.82
3634 5968 0.035176 GTGCCACCAACCGGTACTAA 59.965 55.000 8.00 0.00 46.94 2.24
3635 5969 0.985760 TGCCACCAACCGGTACTAAT 59.014 50.000 8.00 0.00 46.94 1.73
3636 5970 1.339247 TGCCACCAACCGGTACTAATG 60.339 52.381 8.00 0.73 46.94 1.90
3637 5971 2.015081 GCCACCAACCGGTACTAATGG 61.015 57.143 18.75 18.75 46.94 3.16
3638 5972 1.407712 CCACCAACCGGTACTAATGGG 60.408 57.143 23.01 13.27 46.94 4.00
3639 5973 1.555992 CACCAACCGGTACTAATGGGA 59.444 52.381 23.01 0.00 46.94 4.37
3640 5974 2.171870 CACCAACCGGTACTAATGGGAT 59.828 50.000 23.01 3.72 46.94 3.85
3641 5975 2.848071 ACCAACCGGTACTAATGGGATT 59.152 45.455 23.01 3.06 46.71 3.01
3642 5976 3.267551 ACCAACCGGTACTAATGGGATTT 59.732 43.478 23.01 2.72 46.71 2.17
3643 5977 3.630312 CCAACCGGTACTAATGGGATTTG 59.370 47.826 8.00 0.00 0.00 2.32
3644 5978 4.519213 CAACCGGTACTAATGGGATTTGA 58.481 43.478 8.00 0.00 0.00 2.69
3645 5979 4.417426 ACCGGTACTAATGGGATTTGAG 57.583 45.455 4.49 0.00 0.00 3.02
3646 5980 3.135895 ACCGGTACTAATGGGATTTGAGG 59.864 47.826 4.49 0.00 0.00 3.86
3647 5981 3.139077 CGGTACTAATGGGATTTGAGGC 58.861 50.000 0.00 0.00 0.00 4.70
3648 5982 3.433031 CGGTACTAATGGGATTTGAGGCA 60.433 47.826 0.00 0.00 0.00 4.75
3649 5983 4.729868 GGTACTAATGGGATTTGAGGCAT 58.270 43.478 0.00 0.00 0.00 4.40
3650 5984 5.140454 GGTACTAATGGGATTTGAGGCATT 58.860 41.667 0.00 0.00 0.00 3.56
3651 5985 6.303839 GGTACTAATGGGATTTGAGGCATTA 58.696 40.000 0.00 0.00 0.00 1.90
3652 5986 6.431234 GGTACTAATGGGATTTGAGGCATTAG 59.569 42.308 2.11 2.11 38.12 1.73
3653 5987 6.018433 ACTAATGGGATTTGAGGCATTAGT 57.982 37.500 2.92 2.92 39.53 2.24
3654 5988 7.149202 ACTAATGGGATTTGAGGCATTAGTA 57.851 36.000 5.37 0.00 41.30 1.82
3655 5989 6.998673 ACTAATGGGATTTGAGGCATTAGTAC 59.001 38.462 5.37 0.00 41.30 2.73
3656 5990 4.164843 TGGGATTTGAGGCATTAGTACC 57.835 45.455 0.00 0.00 0.00 3.34
3657 5991 3.139077 GGGATTTGAGGCATTAGTACCG 58.861 50.000 0.00 0.00 0.00 4.02
3658 5992 3.139077 GGATTTGAGGCATTAGTACCGG 58.861 50.000 0.00 0.00 0.00 5.28
3659 5993 3.433173 GGATTTGAGGCATTAGTACCGGT 60.433 47.826 13.98 13.98 0.00 5.28
3660 5994 3.706600 TTTGAGGCATTAGTACCGGTT 57.293 42.857 15.04 0.00 0.00 4.44
3661 5995 2.973694 TGAGGCATTAGTACCGGTTC 57.026 50.000 15.04 8.12 0.00 3.62
3662 5996 2.181125 TGAGGCATTAGTACCGGTTCA 58.819 47.619 15.04 3.60 0.00 3.18
3663 5997 2.769663 TGAGGCATTAGTACCGGTTCAT 59.230 45.455 15.04 0.95 0.00 2.57
3664 5998 3.131396 GAGGCATTAGTACCGGTTCATG 58.869 50.000 15.04 9.85 0.00 3.07
3665 5999 2.158813 AGGCATTAGTACCGGTTCATGG 60.159 50.000 15.04 0.00 0.00 3.66
3666 6000 1.602377 GCATTAGTACCGGTTCATGGC 59.398 52.381 15.04 6.75 0.00 4.40
3667 6001 2.912771 CATTAGTACCGGTTCATGGCA 58.087 47.619 15.04 0.00 0.00 4.92
3668 6002 2.389962 TTAGTACCGGTTCATGGCAC 57.610 50.000 15.04 1.99 0.00 5.01
3669 6003 0.173935 TAGTACCGGTTCATGGCACG 59.826 55.000 15.04 0.00 0.00 5.34
3670 6004 1.079681 GTACCGGTTCATGGCACGA 60.080 57.895 15.04 0.00 0.00 4.35
3671 6005 0.671163 GTACCGGTTCATGGCACGAA 60.671 55.000 15.04 0.00 0.00 3.85
3672 6006 0.671163 TACCGGTTCATGGCACGAAC 60.671 55.000 17.48 17.48 41.66 3.95
3675 6009 2.867472 GTTCATGGCACGAACCGG 59.133 61.111 15.10 0.00 37.40 5.28
3676 6010 1.964373 GTTCATGGCACGAACCGGT 60.964 57.895 15.10 0.00 37.40 5.28
3677 6011 0.671163 GTTCATGGCACGAACCGGTA 60.671 55.000 15.10 0.00 37.40 4.02
3678 6012 0.671163 TTCATGGCACGAACCGGTAC 60.671 55.000 8.00 0.00 0.00 3.34
3679 6013 1.079405 CATGGCACGAACCGGTACT 60.079 57.895 8.00 0.00 0.00 2.73
3680 6014 0.173935 CATGGCACGAACCGGTACTA 59.826 55.000 8.00 0.00 0.00 1.82
3681 6015 0.896923 ATGGCACGAACCGGTACTAA 59.103 50.000 8.00 0.00 0.00 2.24
3682 6016 0.678395 TGGCACGAACCGGTACTAAA 59.322 50.000 8.00 0.00 0.00 1.85
3683 6017 1.337074 TGGCACGAACCGGTACTAAAG 60.337 52.381 8.00 0.00 0.00 1.85
3684 6018 1.353076 GCACGAACCGGTACTAAAGG 58.647 55.000 8.00 0.00 0.00 3.11
3685 6019 1.337167 GCACGAACCGGTACTAAAGGT 60.337 52.381 8.00 0.00 40.50 3.50
3686 6020 2.599659 CACGAACCGGTACTAAAGGTC 58.400 52.381 8.00 0.00 37.26 3.85
3687 6021 1.546029 ACGAACCGGTACTAAAGGTCC 59.454 52.381 8.00 0.00 37.26 4.46
3688 6022 1.134995 CGAACCGGTACTAAAGGTCCC 60.135 57.143 8.00 0.00 37.26 4.46
3689 6023 1.901833 GAACCGGTACTAAAGGTCCCA 59.098 52.381 8.00 0.00 37.26 4.37
3690 6024 2.259014 ACCGGTACTAAAGGTCCCAT 57.741 50.000 4.49 0.00 31.69 4.00
3691 6025 2.554563 ACCGGTACTAAAGGTCCCATT 58.445 47.619 4.49 0.00 31.69 3.16
3692 6026 2.914941 ACCGGTACTAAAGGTCCCATTT 59.085 45.455 4.49 0.00 31.69 2.32
3693 6027 3.331591 ACCGGTACTAAAGGTCCCATTTT 59.668 43.478 4.49 0.00 31.69 1.82
3694 6028 3.943381 CCGGTACTAAAGGTCCCATTTTC 59.057 47.826 0.00 0.00 0.00 2.29
3695 6029 4.566070 CCGGTACTAAAGGTCCCATTTTCA 60.566 45.833 0.00 0.00 0.00 2.69
3696 6030 5.005094 CGGTACTAAAGGTCCCATTTTCAA 58.995 41.667 0.00 0.00 0.00 2.69
3697 6031 5.474189 CGGTACTAAAGGTCCCATTTTCAAA 59.526 40.000 0.00 0.00 0.00 2.69
3698 6032 6.569035 CGGTACTAAAGGTCCCATTTTCAAAC 60.569 42.308 0.00 0.00 0.00 2.93
3699 6033 6.492429 GGTACTAAAGGTCCCATTTTCAAACT 59.508 38.462 0.00 0.00 0.00 2.66
3700 6034 6.650427 ACTAAAGGTCCCATTTTCAAACTC 57.350 37.500 0.00 0.00 0.00 3.01
3701 6035 6.373759 ACTAAAGGTCCCATTTTCAAACTCT 58.626 36.000 0.00 0.00 0.00 3.24
3702 6036 7.523415 ACTAAAGGTCCCATTTTCAAACTCTA 58.477 34.615 0.00 0.00 0.00 2.43
3703 6037 6.650427 AAAGGTCCCATTTTCAAACTCTAC 57.350 37.500 0.00 0.00 0.00 2.59
3704 6038 4.663334 AGGTCCCATTTTCAAACTCTACC 58.337 43.478 0.00 0.00 0.00 3.18
3705 6039 3.762288 GGTCCCATTTTCAAACTCTACCC 59.238 47.826 0.00 0.00 0.00 3.69
3706 6040 3.762288 GTCCCATTTTCAAACTCTACCCC 59.238 47.826 0.00 0.00 0.00 4.95
3707 6041 3.096852 CCCATTTTCAAACTCTACCCCC 58.903 50.000 0.00 0.00 0.00 5.40
3721 6055 3.171388 CCCCCTCCCCTTGGATCG 61.171 72.222 0.00 0.00 40.80 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.917385 ACATATGGGTGAACTGCTAAACA 58.083 39.130 7.80 0.00 0.00 2.83
20 21 5.003804 GTGAGTGAAAACAGACATATGGGT 58.996 41.667 7.80 0.00 0.00 4.51
25 26 3.493129 GTGCGTGAGTGAAAACAGACATA 59.507 43.478 0.00 0.00 0.00 2.29
63 64 0.035152 TGGACGAGATGGCAAATGCT 60.035 50.000 5.25 0.00 41.70 3.79
86 87 0.674534 GTGTGGGAGAGAAGACGTGT 59.325 55.000 0.00 0.00 0.00 4.49
88 89 1.186267 GGGTGTGGGAGAGAAGACGT 61.186 60.000 0.00 0.00 0.00 4.34
122 124 4.499526 CCATGTACACTGCAAAACACATGT 60.500 41.667 20.69 0.00 40.90 3.21
206 216 1.474677 CCCTGCAAAACACATGGCAAA 60.475 47.619 0.00 0.00 35.59 3.68
229 239 1.271379 CACACTAGGGCAGTTGACGTA 59.729 52.381 0.00 0.00 34.26 3.57
233 243 0.764890 AAGCACACTAGGGCAGTTGA 59.235 50.000 0.00 0.00 34.26 3.18
253 267 6.543430 AAGAGAGAGTTGACATCTGCTTAT 57.457 37.500 0.00 0.00 0.00 1.73
300 315 3.669122 CGTGTAGCACTACAAAGAGACAC 59.331 47.826 11.92 0.00 46.33 3.67
314 329 0.963225 TAGACAGTTGCCGTGTAGCA 59.037 50.000 0.00 0.00 42.17 3.49
353 368 7.226325 CAGTTGCCATGATTTGAAAACCTTAAA 59.774 33.333 0.00 0.00 0.00 1.52
428 445 6.662865 TGCCATGATTTGAAAACTTTAGGA 57.337 33.333 0.00 0.00 0.00 2.94
575 592 3.889196 TCAATGTCCGTTTAACTGCAC 57.111 42.857 0.00 0.00 0.00 4.57
613 630 1.153249 CACGTGTCCCCACAGTTGT 60.153 57.895 7.58 0.00 41.93 3.32
632 650 2.261671 GTCCCGCGTGACAGTCAT 59.738 61.111 17.08 0.00 35.29 3.06
693 712 6.430000 GCCTACGTGTGGATAAAATGGATAAT 59.570 38.462 12.69 0.00 0.00 1.28
747 771 4.319911 GGCAAAACAACTAGCGTTCACATA 60.320 41.667 0.00 0.00 0.00 2.29
828 854 0.759959 TGGAGTGCGGGTGTTAAGAA 59.240 50.000 0.00 0.00 0.00 2.52
829 855 0.034337 GTGGAGTGCGGGTGTTAAGA 59.966 55.000 0.00 0.00 0.00 2.10
840 866 1.798813 CTGTTTTAGGACGTGGAGTGC 59.201 52.381 0.00 0.00 41.95 4.40
844 870 4.022068 ACGATTACTGTTTTAGGACGTGGA 60.022 41.667 0.00 0.00 0.00 4.02
845 871 4.240096 ACGATTACTGTTTTAGGACGTGG 58.760 43.478 0.00 0.00 0.00 4.94
846 872 5.403166 TCAACGATTACTGTTTTAGGACGTG 59.597 40.000 0.00 0.00 0.00 4.49
847 873 5.531634 TCAACGATTACTGTTTTAGGACGT 58.468 37.500 0.00 0.00 0.00 4.34
848 874 6.456447 TTCAACGATTACTGTTTTAGGACG 57.544 37.500 0.00 0.00 0.00 4.79
849 875 6.304882 GCTTCAACGATTACTGTTTTAGGAC 58.695 40.000 0.00 0.00 0.00 3.85
850 876 5.410439 GGCTTCAACGATTACTGTTTTAGGA 59.590 40.000 0.00 0.00 0.00 2.94
851 877 5.180492 TGGCTTCAACGATTACTGTTTTAGG 59.820 40.000 0.00 0.00 0.00 2.69
852 878 6.077838 GTGGCTTCAACGATTACTGTTTTAG 58.922 40.000 0.00 0.00 0.00 1.85
853 879 5.333492 CGTGGCTTCAACGATTACTGTTTTA 60.333 40.000 0.00 0.00 0.00 1.52
854 880 4.553938 CGTGGCTTCAACGATTACTGTTTT 60.554 41.667 0.00 0.00 0.00 2.43
855 881 3.059188 CGTGGCTTCAACGATTACTGTTT 60.059 43.478 0.00 0.00 0.00 2.83
856 882 2.478894 CGTGGCTTCAACGATTACTGTT 59.521 45.455 0.00 0.00 0.00 3.16
857 883 2.066262 CGTGGCTTCAACGATTACTGT 58.934 47.619 0.00 0.00 0.00 3.55
858 884 2.066262 ACGTGGCTTCAACGATTACTG 58.934 47.619 2.62 0.00 0.00 2.74
859 885 2.066262 CACGTGGCTTCAACGATTACT 58.934 47.619 7.95 0.00 0.00 2.24
860 886 1.127951 CCACGTGGCTTCAACGATTAC 59.872 52.381 24.02 0.00 0.00 1.89
861 887 1.434555 CCACGTGGCTTCAACGATTA 58.565 50.000 24.02 0.00 0.00 1.75
862 888 2.244000 CCACGTGGCTTCAACGATT 58.756 52.632 24.02 0.00 0.00 3.34
863 889 3.966215 CCACGTGGCTTCAACGAT 58.034 55.556 24.02 0.00 0.00 3.73
873 899 2.320587 GCAGACAAGAGCCACGTGG 61.321 63.158 30.66 30.66 38.53 4.94
874 900 0.882042 AAGCAGACAAGAGCCACGTG 60.882 55.000 9.08 9.08 0.00 4.49
875 901 0.601311 GAAGCAGACAAGAGCCACGT 60.601 55.000 0.00 0.00 0.00 4.49
876 902 0.601046 TGAAGCAGACAAGAGCCACG 60.601 55.000 0.00 0.00 0.00 4.94
877 903 0.871057 GTGAAGCAGACAAGAGCCAC 59.129 55.000 0.00 0.00 0.00 5.01
878 904 0.601046 CGTGAAGCAGACAAGAGCCA 60.601 55.000 0.00 0.00 0.00 4.75
879 905 0.319900 TCGTGAAGCAGACAAGAGCC 60.320 55.000 0.00 0.00 0.00 4.70
880 906 1.392853 CATCGTGAAGCAGACAAGAGC 59.607 52.381 0.00 0.00 0.00 4.09
881 907 2.951726 TCATCGTGAAGCAGACAAGAG 58.048 47.619 0.00 0.00 0.00 2.85
882 908 3.599730 ATCATCGTGAAGCAGACAAGA 57.400 42.857 0.00 0.00 0.00 3.02
883 909 3.681417 TCAATCATCGTGAAGCAGACAAG 59.319 43.478 0.00 0.00 0.00 3.16
884 910 3.663025 TCAATCATCGTGAAGCAGACAA 58.337 40.909 0.00 0.00 0.00 3.18
885 911 3.317603 TCAATCATCGTGAAGCAGACA 57.682 42.857 0.00 0.00 0.00 3.41
886 912 5.284864 TCTATCAATCATCGTGAAGCAGAC 58.715 41.667 0.00 0.00 0.00 3.51
887 913 5.520376 TCTATCAATCATCGTGAAGCAGA 57.480 39.130 0.00 0.00 0.00 4.26
888 914 5.695363 ACATCTATCAATCATCGTGAAGCAG 59.305 40.000 0.00 0.00 0.00 4.24
889 915 5.464389 CACATCTATCAATCATCGTGAAGCA 59.536 40.000 0.00 0.00 0.00 3.91
890 916 5.464722 ACACATCTATCAATCATCGTGAAGC 59.535 40.000 0.00 0.00 0.00 3.86
891 917 7.474398 AACACATCTATCAATCATCGTGAAG 57.526 36.000 0.00 0.00 0.00 3.02
892 918 7.254084 CGAAACACATCTATCAATCATCGTGAA 60.254 37.037 0.00 0.00 0.00 3.18
893 919 6.198966 CGAAACACATCTATCAATCATCGTGA 59.801 38.462 0.00 0.00 0.00 4.35
894 920 6.350200 CGAAACACATCTATCAATCATCGTG 58.650 40.000 0.00 0.00 0.00 4.35
895 921 5.050769 GCGAAACACATCTATCAATCATCGT 60.051 40.000 0.00 0.00 0.00 3.73
896 922 5.369187 GCGAAACACATCTATCAATCATCG 58.631 41.667 0.00 0.00 0.00 3.84
897 923 5.237127 TGGCGAAACACATCTATCAATCATC 59.763 40.000 0.00 0.00 0.00 2.92
898 924 5.125356 TGGCGAAACACATCTATCAATCAT 58.875 37.500 0.00 0.00 0.00 2.45
899 925 4.512484 TGGCGAAACACATCTATCAATCA 58.488 39.130 0.00 0.00 0.00 2.57
900 926 5.679734 ATGGCGAAACACATCTATCAATC 57.320 39.130 0.00 0.00 0.00 2.67
901 927 6.712095 ACATATGGCGAAACACATCTATCAAT 59.288 34.615 7.80 0.00 0.00 2.57
902 928 6.054941 ACATATGGCGAAACACATCTATCAA 58.945 36.000 7.80 0.00 0.00 2.57
903 929 5.610398 ACATATGGCGAAACACATCTATCA 58.390 37.500 7.80 0.00 0.00 2.15
904 930 7.652300 TTACATATGGCGAAACACATCTATC 57.348 36.000 7.80 0.00 0.00 2.08
905 931 7.307989 GCTTTACATATGGCGAAACACATCTAT 60.308 37.037 7.80 0.00 0.00 1.98
906 932 6.018262 GCTTTACATATGGCGAAACACATCTA 60.018 38.462 7.80 0.00 0.00 1.98
907 933 5.220854 GCTTTACATATGGCGAAACACATCT 60.221 40.000 7.80 0.00 0.00 2.90
908 934 4.970003 GCTTTACATATGGCGAAACACATC 59.030 41.667 7.80 0.00 0.00 3.06
909 935 4.397730 TGCTTTACATATGGCGAAACACAT 59.602 37.500 7.80 0.00 0.00 3.21
910 936 3.753797 TGCTTTACATATGGCGAAACACA 59.246 39.130 7.80 1.91 0.00 3.72
911 937 4.349663 TGCTTTACATATGGCGAAACAC 57.650 40.909 7.80 0.00 0.00 3.32
912 938 4.637977 TGATGCTTTACATATGGCGAAACA 59.362 37.500 7.80 1.22 39.84 2.83
913 939 5.168526 TGATGCTTTACATATGGCGAAAC 57.831 39.130 7.80 0.00 39.84 2.78
914 940 5.124617 TGTTGATGCTTTACATATGGCGAAA 59.875 36.000 7.80 3.91 39.84 3.46
915 941 4.637977 TGTTGATGCTTTACATATGGCGAA 59.362 37.500 7.80 0.00 39.84 4.70
916 942 4.195416 TGTTGATGCTTTACATATGGCGA 58.805 39.130 7.80 0.00 39.84 5.54
917 943 4.273235 TCTGTTGATGCTTTACATATGGCG 59.727 41.667 7.80 0.00 39.84 5.69
923 949 4.074259 TGTGCTCTGTTGATGCTTTACAT 58.926 39.130 0.00 0.00 43.54 2.29
925 951 4.222114 GTTGTGCTCTGTTGATGCTTTAC 58.778 43.478 0.00 0.00 0.00 2.01
926 952 3.253188 GGTTGTGCTCTGTTGATGCTTTA 59.747 43.478 0.00 0.00 0.00 1.85
927 953 2.035066 GGTTGTGCTCTGTTGATGCTTT 59.965 45.455 0.00 0.00 0.00 3.51
938 964 4.263905 TGGATTAATCTTGGGTTGTGCTCT 60.264 41.667 14.95 0.00 0.00 4.09
939 965 4.016444 TGGATTAATCTTGGGTTGTGCTC 58.984 43.478 14.95 0.00 0.00 4.26
1003 1030 1.915093 CGCGCAACGTAGTACCATC 59.085 57.895 8.75 0.00 45.00 3.51
1006 1033 3.548231 GGCGCGCAACGTAGTACC 61.548 66.667 34.42 7.22 45.00 3.34
1020 1047 3.499737 GTGACCAAGATGGCGGCG 61.500 66.667 0.51 0.51 42.67 6.46
1021 1048 3.134127 GGTGACCAAGATGGCGGC 61.134 66.667 0.00 0.00 42.67 6.53
1022 1049 2.819595 CGGTGACCAAGATGGCGG 60.820 66.667 1.11 0.00 42.67 6.13
1023 1050 2.047274 ACGGTGACCAAGATGGCG 60.047 61.111 1.11 0.00 42.67 5.69
1027 1054 0.252284 AGGAGGACGGTGACCAAGAT 60.252 55.000 1.11 0.00 0.00 2.40
1035 1062 3.775654 GCCAGGAGGAGGACGGTG 61.776 72.222 0.00 0.00 36.89 4.94
1065 1092 1.142185 CGCTTCGTCGATGCATCAGT 61.142 55.000 25.70 0.00 33.20 3.41
1088 1115 3.497031 GCAGTTTACGGCGAGGGC 61.497 66.667 16.62 4.36 38.90 5.19
1089 1116 2.818274 GGCAGTTTACGGCGAGGG 60.818 66.667 16.62 0.00 37.94 4.30
1097 1124 3.122971 GTCCCGGCGGCAGTTTAC 61.123 66.667 23.20 7.19 0.00 2.01
1237 1264 4.477975 GGCCGAGGACACGACGAG 62.478 72.222 0.00 0.00 35.09 4.18
1374 1401 4.508128 CGGACGTGGCGCCAGTAT 62.508 66.667 33.73 18.99 0.00 2.12
1524 1551 3.234041 CGCGACTTGAGCTCGACG 61.234 66.667 9.64 9.34 32.65 5.12
1558 1585 1.826096 CATGCCCATCATGGTGTTCAA 59.174 47.619 5.00 0.00 46.81 2.69
1563 1590 1.886542 CAGATCATGCCCATCATGGTG 59.113 52.381 2.07 0.00 46.09 4.17
1617 1652 4.873129 CTCACCCCCGCGTCGATG 62.873 72.222 4.92 0.00 0.00 3.84
1647 1682 0.035056 CCACCATCTCCCTGAACCAC 60.035 60.000 0.00 0.00 0.00 4.16
1657 1692 4.899239 CGCCGCCTCCACCATCTC 62.899 72.222 0.00 0.00 0.00 2.75
1659 1694 4.241555 ATCGCCGCCTCCACCATC 62.242 66.667 0.00 0.00 0.00 3.51
1670 1705 3.250323 CGCTCAGTGTCATCGCCG 61.250 66.667 0.00 0.00 0.00 6.46
1680 1715 4.702081 GTCGACGCACCGCTCAGT 62.702 66.667 0.00 0.00 0.00 3.41
1817 1852 1.684386 CTCCATCTCCTTCCGCTGCT 61.684 60.000 0.00 0.00 0.00 4.24
1835 1870 2.788589 GTCCCTCCTCCCCCTTCT 59.211 66.667 0.00 0.00 0.00 2.85
1842 1877 2.123640 CTCCTCCGTCCCTCCTCC 60.124 72.222 0.00 0.00 0.00 4.30
1862 1897 4.615815 GCAGCGCCCCGATCATCT 62.616 66.667 2.29 0.00 0.00 2.90
1951 1986 4.011698 CTGTGGACAATGGTGATTGATGA 58.988 43.478 0.00 0.00 41.49 2.92
1964 2003 2.031258 TTCGTCAAAGCTGTGGACAA 57.969 45.000 3.47 0.00 0.00 3.18
2009 2048 1.769026 CTCTTGGGATCGGAGTGAGA 58.231 55.000 0.00 0.00 0.00 3.27
2015 2054 0.325671 AAGGAGCTCTTGGGATCGGA 60.326 55.000 14.64 0.00 33.76 4.55
2126 2165 1.061411 CAATGCACGCGTCCATCTG 59.939 57.895 17.38 12.72 0.00 2.90
2143 2182 3.241530 AGCCGCAGTGGTTCTCCA 61.242 61.111 0.89 0.00 42.05 3.86
2378 2424 0.622136 TAGCACCACTACCTCTCGGA 59.378 55.000 0.00 0.00 0.00 4.55
2380 2426 3.802948 ATTTAGCACCACTACCTCTCG 57.197 47.619 0.00 0.00 0.00 4.04
2429 2475 7.899841 CGAAATATGTACACAGACACAAGATTG 59.100 37.037 0.00 0.00 30.52 2.67
2438 2484 3.555956 CCTGCCGAAATATGTACACAGAC 59.444 47.826 0.00 0.00 0.00 3.51
2443 2489 4.580868 TCAAACCTGCCGAAATATGTACA 58.419 39.130 0.00 0.00 0.00 2.90
2444 2490 4.035208 CCTCAAACCTGCCGAAATATGTAC 59.965 45.833 0.00 0.00 0.00 2.90
2691 4065 2.091994 CCTGGGAAGATGAAGAGCCATT 60.092 50.000 0.00 0.00 0.00 3.16
2696 4070 5.147032 ACTCTATCCTGGGAAGATGAAGAG 58.853 45.833 0.00 0.00 35.27 2.85
2707 4081 6.094048 CACAACAACAATTACTCTATCCTGGG 59.906 42.308 0.00 0.00 0.00 4.45
2710 4084 9.959721 ATTACACAACAACAATTACTCTATCCT 57.040 29.630 0.00 0.00 0.00 3.24
2738 4112 9.945904 TGTAGTACAATGAAACAACCATGTATA 57.054 29.630 0.00 0.00 39.40 1.47
2739 4113 8.856153 TGTAGTACAATGAAACAACCATGTAT 57.144 30.769 0.00 0.00 39.40 2.29
2740 4114 8.856153 ATGTAGTACAATGAAACAACCATGTA 57.144 30.769 7.16 0.00 39.40 2.29
2741 4115 7.759489 ATGTAGTACAATGAAACAACCATGT 57.241 32.000 7.16 0.00 43.14 3.21
2742 4116 8.946085 ACTATGTAGTACAATGAAACAACCATG 58.054 33.333 7.16 0.00 34.13 3.66
2758 4132 2.146342 GCGCGGGAGTACTATGTAGTA 58.854 52.381 8.83 0.00 37.73 1.82
2759 4133 0.950116 GCGCGGGAGTACTATGTAGT 59.050 55.000 8.83 0.00 40.24 2.73
2760 4134 0.110328 CGCGCGGGAGTACTATGTAG 60.110 60.000 24.84 0.00 0.00 2.74
2761 4135 0.815213 ACGCGCGGGAGTACTATGTA 60.815 55.000 35.22 0.00 0.00 2.29
2762 4136 1.660560 AACGCGCGGGAGTACTATGT 61.661 55.000 35.22 4.80 0.00 2.29
2763 4137 1.065273 AACGCGCGGGAGTACTATG 59.935 57.895 35.22 1.22 0.00 2.23
2764 4138 1.065273 CAACGCGCGGGAGTACTAT 59.935 57.895 35.22 6.31 0.00 2.12
2765 4139 1.378882 ATCAACGCGCGGGAGTACTA 61.379 55.000 35.22 10.40 0.00 1.82
2766 4140 2.707849 ATCAACGCGCGGGAGTACT 61.708 57.895 35.22 12.88 0.00 2.73
2767 4141 2.202703 ATCAACGCGCGGGAGTAC 60.203 61.111 35.22 0.00 0.00 2.73
2768 4142 2.202690 CATCAACGCGCGGGAGTA 60.203 61.111 35.22 14.75 0.00 2.59
2772 4146 4.817063 CTTGCATCAACGCGCGGG 62.817 66.667 35.22 25.15 33.35 6.13
2773 4147 2.582202 ATTCTTGCATCAACGCGCGG 62.582 55.000 35.22 17.77 33.35 6.46
2774 4148 0.794229 AATTCTTGCATCAACGCGCG 60.794 50.000 30.96 30.96 33.35 6.86
2775 4149 1.339711 AAATTCTTGCATCAACGCGC 58.660 45.000 5.73 0.00 33.35 6.86
2776 4150 4.489206 GCTAAAAATTCTTGCATCAACGCG 60.489 41.667 3.53 3.53 33.35 6.01
2777 4151 4.385447 TGCTAAAAATTCTTGCATCAACGC 59.615 37.500 0.00 0.00 0.00 4.84
2778 4152 6.636666 ATGCTAAAAATTCTTGCATCAACG 57.363 33.333 0.00 0.00 39.79 4.10
2783 4157 8.475639 AGATGAAGATGCTAAAAATTCTTGCAT 58.524 29.630 8.47 8.47 45.48 3.96
2784 4158 7.833786 AGATGAAGATGCTAAAAATTCTTGCA 58.166 30.769 0.00 0.00 38.05 4.08
2785 4159 8.699283 AAGATGAAGATGCTAAAAATTCTTGC 57.301 30.769 0.00 0.00 0.00 4.01
2786 4160 9.298774 GGAAGATGAAGATGCTAAAAATTCTTG 57.701 33.333 0.00 0.00 0.00 3.02
2787 4161 8.473219 GGGAAGATGAAGATGCTAAAAATTCTT 58.527 33.333 0.00 0.00 0.00 2.52
2788 4162 7.616935 TGGGAAGATGAAGATGCTAAAAATTCT 59.383 33.333 0.00 0.00 0.00 2.40
2789 4163 7.775120 TGGGAAGATGAAGATGCTAAAAATTC 58.225 34.615 0.00 0.00 0.00 2.17
2790 4164 7.147776 CCTGGGAAGATGAAGATGCTAAAAATT 60.148 37.037 0.00 0.00 0.00 1.82
2791 4165 6.323225 CCTGGGAAGATGAAGATGCTAAAAAT 59.677 38.462 0.00 0.00 0.00 1.82
2792 4166 5.653769 CCTGGGAAGATGAAGATGCTAAAAA 59.346 40.000 0.00 0.00 0.00 1.94
2793 4167 5.044919 TCCTGGGAAGATGAAGATGCTAAAA 60.045 40.000 0.00 0.00 0.00 1.52
2794 4168 4.474651 TCCTGGGAAGATGAAGATGCTAAA 59.525 41.667 0.00 0.00 0.00 1.85
2795 4169 4.040047 TCCTGGGAAGATGAAGATGCTAA 58.960 43.478 0.00 0.00 0.00 3.09
2796 4170 3.657610 TCCTGGGAAGATGAAGATGCTA 58.342 45.455 0.00 0.00 0.00 3.49
2797 4171 2.485659 TCCTGGGAAGATGAAGATGCT 58.514 47.619 0.00 0.00 0.00 3.79
2798 4172 3.505480 ATCCTGGGAAGATGAAGATGC 57.495 47.619 0.00 0.00 0.00 3.91
2799 4173 5.543405 ACTCTATCCTGGGAAGATGAAGATG 59.457 44.000 0.00 0.00 0.00 2.90
2800 4174 5.725490 ACTCTATCCTGGGAAGATGAAGAT 58.275 41.667 0.00 0.00 0.00 2.40
2801 4175 5.149584 ACTCTATCCTGGGAAGATGAAGA 57.850 43.478 0.00 0.00 0.00 2.87
2802 4176 6.985653 TTACTCTATCCTGGGAAGATGAAG 57.014 41.667 0.00 0.00 0.00 3.02
2811 4185 6.094048 CACAACAACAATTACTCTATCCTGGG 59.906 42.308 0.00 0.00 0.00 4.45
2814 4188 9.959721 ATTACACAACAACAATTACTCTATCCT 57.040 29.630 0.00 0.00 0.00 3.24
2843 4217 8.090250 TGTAGTACAATGAAACAACCATGTAC 57.910 34.615 0.00 5.90 39.40 2.90
2975 4371 4.947388 GCCTAACATACAACCATTCTCCAA 59.053 41.667 0.00 0.00 0.00 3.53
3135 5204 7.848128 TCTCTGATTTAGAAACGGTAATCCTT 58.152 34.615 0.00 0.00 34.32 3.36
3144 5213 7.434897 CCAGATTCTCTCTCTGATTTAGAAACG 59.565 40.741 1.99 0.00 42.22 3.60
3186 5255 2.035066 AGCTTTTCATGCACTTGTCCAC 59.965 45.455 0.00 0.00 0.00 4.02
3200 5269 9.690434 CATACGTAAAAATGAGAGTAGCTTTTC 57.310 33.333 0.00 0.00 0.00 2.29
3214 5283 5.123186 TGCTAGCTGTTGCATACGTAAAAAT 59.877 36.000 17.23 0.00 42.74 1.82
3364 5698 4.938226 CCAAAGCCCTCTTTTCTACTAGTG 59.062 45.833 5.39 0.00 40.35 2.74
3365 5699 4.597940 ACCAAAGCCCTCTTTTCTACTAGT 59.402 41.667 0.00 0.00 40.35 2.57
3366 5700 5.167303 ACCAAAGCCCTCTTTTCTACTAG 57.833 43.478 0.00 0.00 40.35 2.57
3367 5701 4.019591 GGACCAAAGCCCTCTTTTCTACTA 60.020 45.833 0.00 0.00 40.35 1.82
3368 5702 3.244946 GGACCAAAGCCCTCTTTTCTACT 60.245 47.826 0.00 0.00 40.35 2.57
3369 5703 3.082548 GGACCAAAGCCCTCTTTTCTAC 58.917 50.000 0.00 0.00 40.35 2.59
3370 5704 2.714250 TGGACCAAAGCCCTCTTTTCTA 59.286 45.455 0.00 0.00 40.35 2.10
3371 5705 1.499007 TGGACCAAAGCCCTCTTTTCT 59.501 47.619 0.00 0.00 40.35 2.52
3372 5706 1.613925 GTGGACCAAAGCCCTCTTTTC 59.386 52.381 0.00 0.00 40.35 2.29
3373 5707 1.704641 GTGGACCAAAGCCCTCTTTT 58.295 50.000 0.00 0.00 40.35 2.27
3374 5708 0.178961 GGTGGACCAAAGCCCTCTTT 60.179 55.000 0.00 0.00 42.92 2.52
3375 5709 1.460699 GGTGGACCAAAGCCCTCTT 59.539 57.895 0.00 0.00 35.64 2.85
3376 5710 2.539081 GGGTGGACCAAAGCCCTCT 61.539 63.158 10.80 0.00 39.85 3.69
3377 5711 2.035783 GGGTGGACCAAAGCCCTC 59.964 66.667 10.80 0.00 39.85 4.30
3378 5712 2.452491 AGGGTGGACCAAAGCCCT 60.452 61.111 14.27 14.27 46.02 5.19
3379 5713 2.283173 CAGGGTGGACCAAAGCCC 60.283 66.667 10.18 10.18 43.89 5.19
3380 5714 2.283173 CCAGGGTGGACCAAAGCC 60.283 66.667 0.00 0.00 40.96 4.35
3381 5715 2.283173 CCCAGGGTGGACCAAAGC 60.283 66.667 0.00 0.00 40.96 3.51
3382 5716 0.774908 TAACCCAGGGTGGACCAAAG 59.225 55.000 13.66 0.00 40.96 2.77
3383 5717 0.774908 CTAACCCAGGGTGGACCAAA 59.225 55.000 13.66 0.00 40.96 3.28
3384 5718 1.785353 GCTAACCCAGGGTGGACCAA 61.785 60.000 13.66 0.00 40.96 3.67
3385 5719 2.228480 GCTAACCCAGGGTGGACCA 61.228 63.158 13.66 0.00 40.96 4.02
3386 5720 2.675371 GCTAACCCAGGGTGGACC 59.325 66.667 13.66 0.00 40.96 4.46
3387 5721 2.675371 GGCTAACCCAGGGTGGAC 59.325 66.667 13.66 6.96 40.96 4.02
3397 5731 0.108019 CCGGGACTAATGGGCTAACC 59.892 60.000 0.00 0.00 40.81 2.85
3398 5732 0.835276 ACCGGGACTAATGGGCTAAC 59.165 55.000 6.32 0.00 0.00 2.34
3399 5733 1.487558 GAACCGGGACTAATGGGCTAA 59.512 52.381 6.32 0.00 0.00 3.09
3400 5734 1.125633 GAACCGGGACTAATGGGCTA 58.874 55.000 6.32 0.00 0.00 3.93
3401 5735 0.912487 TGAACCGGGACTAATGGGCT 60.912 55.000 6.32 0.00 0.00 5.19
3402 5736 0.463833 CTGAACCGGGACTAATGGGC 60.464 60.000 6.32 0.00 0.00 5.36
3403 5737 0.909623 ACTGAACCGGGACTAATGGG 59.090 55.000 6.32 0.00 0.00 4.00
3404 5738 1.831736 AGACTGAACCGGGACTAATGG 59.168 52.381 6.32 0.00 0.00 3.16
3405 5739 3.952323 TCTAGACTGAACCGGGACTAATG 59.048 47.826 6.32 0.00 0.00 1.90
3406 5740 4.246712 TCTAGACTGAACCGGGACTAAT 57.753 45.455 6.32 0.00 0.00 1.73
3407 5741 3.726557 TCTAGACTGAACCGGGACTAA 57.273 47.619 6.32 0.00 0.00 2.24
3408 5742 3.350833 GTTCTAGACTGAACCGGGACTA 58.649 50.000 6.32 0.00 40.10 2.59
3409 5743 2.169330 GTTCTAGACTGAACCGGGACT 58.831 52.381 6.32 0.00 40.10 3.85
3410 5744 2.651135 GTTCTAGACTGAACCGGGAC 57.349 55.000 6.32 0.00 40.10 4.46
3416 5750 2.169330 AGTCCCGGTTCTAGACTGAAC 58.831 52.381 9.22 8.44 43.88 3.18
3417 5751 2.599408 AGTCCCGGTTCTAGACTGAA 57.401 50.000 9.22 0.00 39.36 3.02
3418 5752 3.726557 TTAGTCCCGGTTCTAGACTGA 57.273 47.619 17.52 8.89 40.93 3.41
3419 5753 3.068307 CCATTAGTCCCGGTTCTAGACTG 59.932 52.174 17.52 9.86 40.93 3.51
3420 5754 3.297736 CCATTAGTCCCGGTTCTAGACT 58.702 50.000 13.76 13.76 43.17 3.24
3421 5755 2.364647 CCCATTAGTCCCGGTTCTAGAC 59.635 54.545 0.00 0.00 0.00 2.59
3422 5756 2.674420 CCCATTAGTCCCGGTTCTAGA 58.326 52.381 0.00 0.00 0.00 2.43
3423 5757 1.692519 CCCCATTAGTCCCGGTTCTAG 59.307 57.143 0.00 0.00 0.00 2.43
3424 5758 1.693404 CCCCCATTAGTCCCGGTTCTA 60.693 57.143 0.00 0.00 0.00 2.10
3425 5759 0.986550 CCCCCATTAGTCCCGGTTCT 60.987 60.000 0.00 0.15 0.00 3.01
3426 5760 1.530283 CCCCCATTAGTCCCGGTTC 59.470 63.158 0.00 0.00 0.00 3.62
3427 5761 2.686572 GCCCCCATTAGTCCCGGTT 61.687 63.158 0.00 0.00 0.00 4.44
3428 5762 3.094498 GCCCCCATTAGTCCCGGT 61.094 66.667 0.00 0.00 0.00 5.28
3429 5763 2.006805 AATGCCCCCATTAGTCCCGG 62.007 60.000 0.00 0.00 39.81 5.73
3430 5764 0.768622 TAATGCCCCCATTAGTCCCG 59.231 55.000 0.00 0.00 41.68 5.14
3436 5770 0.768622 CGGGACTAATGCCCCCATTA 59.231 55.000 0.00 0.00 42.92 1.90
3437 5771 1.536676 CGGGACTAATGCCCCCATT 59.463 57.895 0.00 0.00 42.92 3.16
3438 5772 2.460853 CCGGGACTAATGCCCCCAT 61.461 63.158 0.00 0.00 42.92 4.00
3439 5773 3.093835 CCGGGACTAATGCCCCCA 61.094 66.667 0.00 0.00 42.92 4.96
3440 5774 2.619941 GAACCGGGACTAATGCCCCC 62.620 65.000 6.32 0.00 42.92 5.40
3441 5775 1.153025 GAACCGGGACTAATGCCCC 60.153 63.158 6.32 0.00 42.92 5.80
3442 5776 1.523032 CGAACCGGGACTAATGCCC 60.523 63.158 6.32 0.00 42.41 5.36
3443 5777 1.087771 CACGAACCGGGACTAATGCC 61.088 60.000 6.32 0.00 28.17 4.40
3444 5778 1.702491 GCACGAACCGGGACTAATGC 61.702 60.000 6.32 4.00 28.17 3.56
3445 5779 1.418342 CGCACGAACCGGGACTAATG 61.418 60.000 6.32 0.00 28.17 1.90
3446 5780 1.153706 CGCACGAACCGGGACTAAT 60.154 57.895 6.32 0.00 28.17 1.73
3447 5781 2.259204 CGCACGAACCGGGACTAA 59.741 61.111 6.32 0.00 28.17 2.24
3448 5782 4.424566 GCGCACGAACCGGGACTA 62.425 66.667 6.32 0.00 28.17 2.59
3454 5788 3.777925 CTCTTGGCGCACGAACCG 61.778 66.667 10.83 0.00 0.00 4.44
3455 5789 3.423154 CCTCTTGGCGCACGAACC 61.423 66.667 10.83 0.00 0.00 3.62
3473 5807 2.635443 GGACAAATGGCCCACGTGG 61.635 63.158 28.26 28.26 37.19 4.94
3474 5808 2.961768 GGACAAATGGCCCACGTG 59.038 61.111 9.08 9.08 37.19 4.49
3480 5814 2.696759 CGAACCGGGACAAATGGCC 61.697 63.158 6.32 0.00 44.61 5.36
3481 5815 1.918868 GACGAACCGGGACAAATGGC 61.919 60.000 6.32 0.00 0.00 4.40
3482 5816 0.321298 AGACGAACCGGGACAAATGG 60.321 55.000 6.32 0.00 0.00 3.16
3483 5817 0.796312 CAGACGAACCGGGACAAATG 59.204 55.000 6.32 0.00 0.00 2.32
3484 5818 0.321298 CCAGACGAACCGGGACAAAT 60.321 55.000 6.32 0.00 0.00 2.32
3485 5819 1.070105 CCAGACGAACCGGGACAAA 59.930 57.895 6.32 0.00 0.00 2.83
3486 5820 1.833492 TCCAGACGAACCGGGACAA 60.833 57.895 6.32 0.00 0.00 3.18
3487 5821 2.203523 TCCAGACGAACCGGGACA 60.204 61.111 6.32 0.00 0.00 4.02
3488 5822 2.260743 GTCCAGACGAACCGGGAC 59.739 66.667 6.32 9.54 42.60 4.46
3489 5823 2.993264 GGTCCAGACGAACCGGGA 60.993 66.667 6.32 0.00 0.00 5.14
3490 5824 2.108278 AAAGGTCCAGACGAACCGGG 62.108 60.000 6.32 0.00 40.63 5.73
3491 5825 0.250166 AAAAGGTCCAGACGAACCGG 60.250 55.000 0.00 0.00 40.63 5.28
3492 5826 2.288640 ACTAAAAGGTCCAGACGAACCG 60.289 50.000 0.00 0.00 40.63 4.44
3493 5827 3.324117 GACTAAAAGGTCCAGACGAACC 58.676 50.000 0.00 0.00 35.69 3.62
3503 5837 1.072806 ACCAACCGGGACTAAAAGGTC 59.927 52.381 6.32 0.00 41.15 3.85
3504 5838 1.142936 ACCAACCGGGACTAAAAGGT 58.857 50.000 6.32 0.00 41.15 3.50
3505 5839 1.530323 CACCAACCGGGACTAAAAGG 58.470 55.000 6.32 0.00 41.15 3.11
3506 5840 0.879090 GCACCAACCGGGACTAAAAG 59.121 55.000 6.32 0.00 41.15 2.27
3507 5841 0.537828 GGCACCAACCGGGACTAAAA 60.538 55.000 6.32 0.00 41.15 1.52
3508 5842 1.073548 GGCACCAACCGGGACTAAA 59.926 57.895 6.32 0.00 41.15 1.85
3509 5843 2.148052 TGGCACCAACCGGGACTAA 61.148 57.895 6.32 0.00 41.15 2.24
3510 5844 2.527123 TGGCACCAACCGGGACTA 60.527 61.111 6.32 0.00 41.15 2.59
3511 5845 4.265056 GTGGCACCAACCGGGACT 62.265 66.667 6.32 0.00 41.15 3.85
3514 5848 4.939368 TTCGTGGCACCAACCGGG 62.939 66.667 12.86 0.00 44.81 5.73
3515 5849 3.656045 GTTCGTGGCACCAACCGG 61.656 66.667 16.03 0.00 38.77 5.28
3516 5850 3.656045 GGTTCGTGGCACCAACCG 61.656 66.667 27.29 9.64 34.04 4.44
3517 5851 3.656045 CGGTTCGTGGCACCAACC 61.656 66.667 30.06 30.06 36.91 3.77
3518 5852 3.656045 CCGGTTCGTGGCACCAAC 61.656 66.667 18.22 18.22 33.36 3.77
3519 5853 4.939368 CCCGGTTCGTGGCACCAA 62.939 66.667 12.86 1.99 33.36 3.67
3522 5856 2.438951 TTAGTCCCGGTTCGTGGCAC 62.439 60.000 7.79 7.79 0.00 5.01
3523 5857 1.756408 TTTAGTCCCGGTTCGTGGCA 61.756 55.000 0.00 0.00 0.00 4.92
3524 5858 1.004679 TTTAGTCCCGGTTCGTGGC 60.005 57.895 0.00 0.00 0.00 5.01
3525 5859 0.390735 CCTTTAGTCCCGGTTCGTGG 60.391 60.000 0.00 0.00 0.00 4.94
3526 5860 0.390735 CCCTTTAGTCCCGGTTCGTG 60.391 60.000 0.00 0.00 0.00 4.35
3527 5861 0.833409 ACCCTTTAGTCCCGGTTCGT 60.833 55.000 0.00 0.00 0.00 3.85
3528 5862 0.390735 CACCCTTTAGTCCCGGTTCG 60.391 60.000 0.00 0.00 0.00 3.95
3529 5863 0.675837 GCACCCTTTAGTCCCGGTTC 60.676 60.000 0.00 0.00 0.00 3.62
3530 5864 1.377612 GCACCCTTTAGTCCCGGTT 59.622 57.895 0.00 0.00 0.00 4.44
3531 5865 2.951101 CGCACCCTTTAGTCCCGGT 61.951 63.158 0.00 0.00 0.00 5.28
3532 5866 1.968050 ATCGCACCCTTTAGTCCCGG 61.968 60.000 0.00 0.00 0.00 5.73
3533 5867 0.810031 CATCGCACCCTTTAGTCCCG 60.810 60.000 0.00 0.00 0.00 5.14
3534 5868 1.095807 GCATCGCACCCTTTAGTCCC 61.096 60.000 0.00 0.00 0.00 4.46
3535 5869 1.095807 GGCATCGCACCCTTTAGTCC 61.096 60.000 0.00 0.00 0.00 3.85
3536 5870 1.095807 GGGCATCGCACCCTTTAGTC 61.096 60.000 0.40 0.00 44.68 2.59
3537 5871 1.077716 GGGCATCGCACCCTTTAGT 60.078 57.895 0.40 0.00 44.68 2.24
3538 5872 3.827634 GGGCATCGCACCCTTTAG 58.172 61.111 0.40 0.00 44.68 1.85
3544 5878 1.166531 GGACTAATGGGCATCGCACC 61.167 60.000 0.00 0.00 0.00 5.01
3545 5879 1.166531 GGGACTAATGGGCATCGCAC 61.167 60.000 0.00 0.00 0.00 5.34
3546 5880 1.148273 GGGACTAATGGGCATCGCA 59.852 57.895 0.00 0.00 0.00 5.10
3547 5881 1.961277 CGGGACTAATGGGCATCGC 60.961 63.158 0.00 0.00 0.00 4.58
3548 5882 1.301716 CCGGGACTAATGGGCATCG 60.302 63.158 0.00 0.00 0.00 3.84
3549 5883 0.182775 AACCGGGACTAATGGGCATC 59.817 55.000 6.32 0.00 0.00 3.91
3550 5884 0.182775 GAACCGGGACTAATGGGCAT 59.817 55.000 6.32 0.00 0.00 4.40
3551 5885 1.605453 GAACCGGGACTAATGGGCA 59.395 57.895 6.32 0.00 0.00 5.36
3552 5886 1.523032 CGAACCGGGACTAATGGGC 60.523 63.158 6.32 0.00 0.00 5.36
3553 5887 0.461339 CACGAACCGGGACTAATGGG 60.461 60.000 6.32 0.00 28.17 4.00
3554 5888 0.461339 CCACGAACCGGGACTAATGG 60.461 60.000 6.32 1.45 28.17 3.16
3555 5889 1.087771 GCCACGAACCGGGACTAATG 61.088 60.000 6.32 0.00 28.17 1.90
3556 5890 1.219935 GCCACGAACCGGGACTAAT 59.780 57.895 6.32 0.00 28.17 1.73
3557 5891 2.208619 TGCCACGAACCGGGACTAA 61.209 57.895 6.32 0.00 28.17 2.24
3558 5892 2.601067 TGCCACGAACCGGGACTA 60.601 61.111 6.32 0.00 28.17 2.59
3559 5893 4.309950 GTGCCACGAACCGGGACT 62.310 66.667 6.32 0.00 41.35 3.85
3562 5896 4.939368 TTGGTGCCACGAACCGGG 62.939 66.667 6.32 0.00 40.86 5.73
3563 5897 3.656045 GTTGGTGCCACGAACCGG 61.656 66.667 11.21 0.00 40.86 5.28
3564 5898 3.656045 GGTTGGTGCCACGAACCG 61.656 66.667 23.24 0.00 44.79 4.44
3566 5900 3.656045 CCGGTTGGTGCCACGAAC 61.656 66.667 13.59 13.59 36.30 3.95
3567 5901 4.939368 CCCGGTTGGTGCCACGAA 62.939 66.667 0.00 0.00 0.00 3.85
3570 5904 2.400269 TTAGTCCCGGTTGGTGCCAC 62.400 60.000 0.00 0.00 34.77 5.01
3571 5905 1.706995 TTTAGTCCCGGTTGGTGCCA 61.707 55.000 0.00 0.00 34.77 4.92
3572 5906 0.958876 CTTTAGTCCCGGTTGGTGCC 60.959 60.000 0.00 0.00 34.77 5.01
3573 5907 0.250597 ACTTTAGTCCCGGTTGGTGC 60.251 55.000 0.00 0.00 34.77 5.01
3574 5908 1.202722 ACACTTTAGTCCCGGTTGGTG 60.203 52.381 0.00 2.25 34.77 4.17
3575 5909 1.134228 ACACTTTAGTCCCGGTTGGT 58.866 50.000 0.00 0.00 34.77 3.67
3576 5910 2.265589 AACACTTTAGTCCCGGTTGG 57.734 50.000 0.00 0.00 0.00 3.77
3577 5911 4.872124 GGTATAACACTTTAGTCCCGGTTG 59.128 45.833 0.00 0.00 0.00 3.77
3578 5912 4.779489 AGGTATAACACTTTAGTCCCGGTT 59.221 41.667 0.00 0.00 0.00 4.44
3579 5913 4.356436 AGGTATAACACTTTAGTCCCGGT 58.644 43.478 0.00 0.00 0.00 5.28
3580 5914 5.349061 AAGGTATAACACTTTAGTCCCGG 57.651 43.478 0.00 0.00 0.00 5.73
3581 5915 7.998753 CTAAAGGTATAACACTTTAGTCCCG 57.001 40.000 16.89 0.00 45.48 5.14
3587 5921 6.440328 ACCGGGACTAAAGGTATAACACTTTA 59.560 38.462 6.32 0.00 37.94 1.85
3588 5922 5.249163 ACCGGGACTAAAGGTATAACACTTT 59.751 40.000 6.32 0.00 39.91 2.66
3589 5923 4.779489 ACCGGGACTAAAGGTATAACACTT 59.221 41.667 6.32 0.00 36.34 3.16
3590 5924 4.356436 ACCGGGACTAAAGGTATAACACT 58.644 43.478 6.32 0.00 36.34 3.55
3591 5925 4.743057 ACCGGGACTAAAGGTATAACAC 57.257 45.455 6.32 0.00 36.34 3.32
3592 5926 4.142182 CGAACCGGGACTAAAGGTATAACA 60.142 45.833 6.32 0.00 37.26 2.41
3593 5927 4.142160 ACGAACCGGGACTAAAGGTATAAC 60.142 45.833 6.32 0.00 37.26 1.89
3594 5928 4.023291 ACGAACCGGGACTAAAGGTATAA 58.977 43.478 6.32 0.00 37.26 0.98
3595 5929 3.381272 CACGAACCGGGACTAAAGGTATA 59.619 47.826 6.32 0.00 37.26 1.47
3596 5930 2.167075 CACGAACCGGGACTAAAGGTAT 59.833 50.000 6.32 0.00 37.26 2.73
3597 5931 1.545582 CACGAACCGGGACTAAAGGTA 59.454 52.381 6.32 0.00 37.26 3.08
3598 5932 0.319405 CACGAACCGGGACTAAAGGT 59.681 55.000 6.32 0.00 40.50 3.50
3599 5933 1.017701 GCACGAACCGGGACTAAAGG 61.018 60.000 6.32 0.00 28.17 3.11
3600 5934 1.017701 GGCACGAACCGGGACTAAAG 61.018 60.000 6.32 0.00 34.24 1.85
3601 5935 1.004679 GGCACGAACCGGGACTAAA 60.005 57.895 6.32 0.00 34.24 1.85
3602 5936 2.208619 TGGCACGAACCGGGACTAA 61.209 57.895 6.32 0.00 40.06 2.24
3603 5937 2.601067 TGGCACGAACCGGGACTA 60.601 61.111 6.32 0.00 40.06 2.59
3604 5938 4.309950 GTGGCACGAACCGGGACT 62.310 66.667 6.32 0.00 40.06 3.85
3607 5941 4.939368 TTGGTGGCACGAACCGGG 62.939 66.667 11.22 0.00 40.86 5.73
3608 5942 3.656045 GTTGGTGGCACGAACCGG 61.656 66.667 28.47 0.00 40.86 5.28
3609 5943 3.656045 GGTTGGTGGCACGAACCG 61.656 66.667 37.28 0.00 44.79 4.44
3611 5945 3.656045 CCGGTTGGTGGCACGAAC 61.656 66.667 30.07 30.07 36.30 3.95
3621 5955 3.570912 AATCCCATTAGTACCGGTTGG 57.429 47.619 15.04 14.60 42.84 3.77
3622 5956 4.519213 TCAAATCCCATTAGTACCGGTTG 58.481 43.478 15.04 3.82 0.00 3.77
3623 5957 4.384868 CCTCAAATCCCATTAGTACCGGTT 60.385 45.833 15.04 0.00 0.00 4.44
3624 5958 3.135895 CCTCAAATCCCATTAGTACCGGT 59.864 47.826 13.98 13.98 0.00 5.28
3625 5959 3.740115 CCTCAAATCCCATTAGTACCGG 58.260 50.000 0.00 0.00 0.00 5.28
3626 5960 3.139077 GCCTCAAATCCCATTAGTACCG 58.861 50.000 0.00 0.00 0.00 4.02
3627 5961 4.164843 TGCCTCAAATCCCATTAGTACC 57.835 45.455 0.00 0.00 0.00 3.34
3628 5962 7.440523 CTAATGCCTCAAATCCCATTAGTAC 57.559 40.000 9.80 0.00 40.65 2.73
3631 5965 6.431234 GGTACTAATGCCTCAAATCCCATTAG 59.569 42.308 14.33 14.33 46.24 1.73
3632 5966 6.303839 GGTACTAATGCCTCAAATCCCATTA 58.696 40.000 0.00 0.00 0.00 1.90
3633 5967 5.140454 GGTACTAATGCCTCAAATCCCATT 58.860 41.667 0.00 0.00 0.00 3.16
3634 5968 4.729868 GGTACTAATGCCTCAAATCCCAT 58.270 43.478 0.00 0.00 0.00 4.00
3635 5969 3.433031 CGGTACTAATGCCTCAAATCCCA 60.433 47.826 0.00 0.00 0.00 4.37
3636 5970 3.139077 CGGTACTAATGCCTCAAATCCC 58.861 50.000 0.00 0.00 0.00 3.85
3637 5971 3.139077 CCGGTACTAATGCCTCAAATCC 58.861 50.000 0.00 0.00 0.00 3.01
3638 5972 3.805207 ACCGGTACTAATGCCTCAAATC 58.195 45.455 4.49 0.00 0.00 2.17
3639 5973 3.926058 ACCGGTACTAATGCCTCAAAT 57.074 42.857 4.49 0.00 0.00 2.32
3640 5974 3.008157 TGAACCGGTACTAATGCCTCAAA 59.992 43.478 8.00 0.00 0.00 2.69
3641 5975 2.568062 TGAACCGGTACTAATGCCTCAA 59.432 45.455 8.00 0.00 0.00 3.02
3642 5976 2.181125 TGAACCGGTACTAATGCCTCA 58.819 47.619 8.00 0.60 0.00 3.86
3643 5977 2.973694 TGAACCGGTACTAATGCCTC 57.026 50.000 8.00 0.00 0.00 4.70
3644 5978 2.158813 CCATGAACCGGTACTAATGCCT 60.159 50.000 8.00 0.00 0.00 4.75
3645 5979 2.218603 CCATGAACCGGTACTAATGCC 58.781 52.381 8.00 0.00 0.00 4.40
3646 5980 1.602377 GCCATGAACCGGTACTAATGC 59.398 52.381 8.00 3.00 0.00 3.56
3647 5981 2.612212 GTGCCATGAACCGGTACTAATG 59.388 50.000 8.00 9.56 36.33 1.90
3648 5982 2.740580 CGTGCCATGAACCGGTACTAAT 60.741 50.000 8.00 0.00 37.03 1.73
3649 5983 1.404449 CGTGCCATGAACCGGTACTAA 60.404 52.381 8.00 0.00 37.03 2.24
3650 5984 0.173935 CGTGCCATGAACCGGTACTA 59.826 55.000 8.00 0.00 37.03 1.82
3651 5985 1.079405 CGTGCCATGAACCGGTACT 60.079 57.895 8.00 0.00 37.03 2.73
3652 5986 0.671163 TTCGTGCCATGAACCGGTAC 60.671 55.000 8.00 0.00 35.94 3.34
3653 5987 0.671163 GTTCGTGCCATGAACCGGTA 60.671 55.000 17.21 0.00 37.98 4.02
3654 5988 1.964373 GTTCGTGCCATGAACCGGT 60.964 57.895 17.21 0.00 37.98 5.28
3655 5989 2.867472 GTTCGTGCCATGAACCGG 59.133 61.111 17.21 0.00 37.98 5.28
3658 5992 0.671163 TACCGGTTCGTGCCATGAAC 60.671 55.000 15.04 19.30 42.00 3.18
3659 5993 0.671163 GTACCGGTTCGTGCCATGAA 60.671 55.000 15.04 0.00 0.00 2.57
3660 5994 1.079681 GTACCGGTTCGTGCCATGA 60.080 57.895 15.04 0.00 0.00 3.07
3661 5995 0.173935 TAGTACCGGTTCGTGCCATG 59.826 55.000 15.04 0.00 0.00 3.66
3662 5996 0.896923 TTAGTACCGGTTCGTGCCAT 59.103 50.000 15.04 0.00 0.00 4.40
3663 5997 0.678395 TTTAGTACCGGTTCGTGCCA 59.322 50.000 15.04 0.00 0.00 4.92
3664 5998 1.353076 CTTTAGTACCGGTTCGTGCC 58.647 55.000 15.04 0.00 0.00 5.01
3665 5999 1.337167 ACCTTTAGTACCGGTTCGTGC 60.337 52.381 15.04 0.00 0.00 5.34
3666 6000 2.599659 GACCTTTAGTACCGGTTCGTG 58.400 52.381 15.04 0.51 0.00 4.35
3667 6001 1.546029 GGACCTTTAGTACCGGTTCGT 59.454 52.381 15.04 0.00 0.00 3.85
3668 6002 1.134995 GGGACCTTTAGTACCGGTTCG 60.135 57.143 15.04 0.00 40.68 3.95
3669 6003 2.680312 GGGACCTTTAGTACCGGTTC 57.320 55.000 15.04 8.12 40.68 3.62
3675 6009 7.447545 AGAGTTTGAAAATGGGACCTTTAGTAC 59.552 37.037 0.00 0.00 0.00 2.73
3676 6010 7.523415 AGAGTTTGAAAATGGGACCTTTAGTA 58.477 34.615 0.00 0.00 0.00 1.82
3677 6011 6.373759 AGAGTTTGAAAATGGGACCTTTAGT 58.626 36.000 0.00 0.00 0.00 2.24
3678 6012 6.901081 AGAGTTTGAAAATGGGACCTTTAG 57.099 37.500 0.00 0.00 0.00 1.85
3679 6013 6.717997 GGTAGAGTTTGAAAATGGGACCTTTA 59.282 38.462 0.00 0.00 0.00 1.85
3680 6014 5.538813 GGTAGAGTTTGAAAATGGGACCTTT 59.461 40.000 0.00 0.00 0.00 3.11
3681 6015 5.077564 GGTAGAGTTTGAAAATGGGACCTT 58.922 41.667 0.00 0.00 0.00 3.50
3682 6016 4.508584 GGGTAGAGTTTGAAAATGGGACCT 60.509 45.833 0.00 0.00 0.00 3.85
3683 6017 3.762288 GGGTAGAGTTTGAAAATGGGACC 59.238 47.826 0.00 0.00 0.00 4.46
3684 6018 3.762288 GGGGTAGAGTTTGAAAATGGGAC 59.238 47.826 0.00 0.00 0.00 4.46
3685 6019 3.245479 GGGGGTAGAGTTTGAAAATGGGA 60.245 47.826 0.00 0.00 0.00 4.37
3686 6020 3.096852 GGGGGTAGAGTTTGAAAATGGG 58.903 50.000 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.