Multiple sequence alignment - TraesCS6B01G337300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G337300 chr6B 100.000 4525 0 0 1 4525 593710934 593715458 0.000000e+00 8357.0
1 TraesCS6B01G337300 chr6B 97.561 41 1 0 1675 1715 142988907 142988867 2.260000e-08 71.3
2 TraesCS6B01G337300 chr6D 94.044 3022 86 33 946 3907 397082292 397085279 0.000000e+00 4497.0
3 TraesCS6B01G337300 chr6D 88.024 835 42 24 116 915 397081489 397082300 0.000000e+00 935.0
4 TraesCS6B01G337300 chr6D 86.070 201 9 6 3930 4130 397085263 397085444 9.930000e-47 198.0
5 TraesCS6B01G337300 chr6D 83.908 87 7 1 4 83 104977626 104977540 4.850000e-10 76.8
6 TraesCS6B01G337300 chr6A 93.926 2914 92 31 985 3852 543394789 543397663 0.000000e+00 4322.0
7 TraesCS6B01G337300 chr6A 83.714 350 8 18 528 862 543394418 543394733 7.410000e-73 285.0
8 TraesCS6B01G337300 chr6A 87.019 208 11 6 3930 4130 543397688 543397886 2.120000e-53 220.0
9 TraesCS6B01G337300 chr7B 88.220 1129 108 18 983 2095 109702377 109703496 0.000000e+00 1325.0
10 TraesCS6B01G337300 chr7B 90.419 167 16 0 2793 2959 109704173 109704339 2.120000e-53 220.0
11 TraesCS6B01G337300 chr7B 83.265 245 26 7 2246 2487 109703638 109703870 1.280000e-50 211.0
12 TraesCS6B01G337300 chr7B 94.309 123 7 0 2365 2487 664108620 664108742 5.980000e-44 189.0
13 TraesCS6B01G337300 chr7B 95.349 86 4 0 3150 3235 109704632 109704717 2.200000e-28 137.0
14 TraesCS6B01G337300 chr7B 89.062 64 3 2 13 76 741337550 741337491 4.850000e-10 76.8
15 TraesCS6B01G337300 chr7D 87.943 1128 113 16 983 2095 146862901 146864020 0.000000e+00 1308.0
16 TraesCS6B01G337300 chr7D 92.462 398 28 2 4128 4524 421411258 421411654 6.570000e-158 568.0
17 TraesCS6B01G337300 chr7D 91.071 168 13 2 2793 2959 146864669 146864835 4.550000e-55 226.0
18 TraesCS6B01G337300 chr7D 76.591 440 71 21 2246 2674 146864162 146864580 3.550000e-51 213.0
19 TraesCS6B01G337300 chr7D 94.309 123 7 0 2365 2487 589514301 589514423 5.980000e-44 189.0
20 TraesCS6B01G337300 chr7D 95.349 86 4 0 3150 3235 146865133 146865218 2.200000e-28 137.0
21 TraesCS6B01G337300 chr7D 94.030 67 4 0 9 75 30389510 30389444 8.010000e-18 102.0
22 TraesCS6B01G337300 chr7A 87.555 1133 111 15 983 2095 148415087 148416209 0.000000e+00 1284.0
23 TraesCS6B01G337300 chr7A 76.986 730 111 40 2246 2959 148416357 148417045 9.250000e-97 364.0
24 TraesCS6B01G337300 chr7A 93.496 123 8 0 2365 2487 681013349 681013227 2.780000e-42 183.0
25 TraesCS6B01G337300 chr7A 95.349 86 4 0 3150 3235 148417339 148417424 2.200000e-28 137.0
26 TraesCS6B01G337300 chr7A 92.405 79 6 0 3300 3378 148417554 148417632 3.700000e-21 113.0
27 TraesCS6B01G337300 chr7A 97.561 41 1 0 1675 1715 637052827 637052787 2.260000e-08 71.3
28 TraesCS6B01G337300 chr4D 81.763 817 123 24 1001 1798 109469594 109470403 0.000000e+00 660.0
29 TraesCS6B01G337300 chr4A 81.740 816 125 20 1001 1798 466941639 466940830 0.000000e+00 660.0
30 TraesCS6B01G337300 chr4B 81.518 817 125 21 1001 1798 170927034 170927843 0.000000e+00 649.0
31 TraesCS6B01G337300 chr4B 92.982 399 27 1 4128 4525 127689501 127689899 8.440000e-162 580.0
32 TraesCS6B01G337300 chr4B 96.825 63 2 0 13 75 172508791 172508729 6.190000e-19 106.0
33 TraesCS6B01G337300 chr3A 92.750 400 27 2 4128 4525 68861829 68862228 1.090000e-160 577.0
34 TraesCS6B01G337300 chr3A 90.152 132 13 0 2367 2498 432041807 432041938 6.020000e-39 172.0
35 TraesCS6B01G337300 chr5D 92.911 395 27 1 4132 4525 546898492 546898886 1.410000e-159 573.0
36 TraesCS6B01G337300 chr5D 92.231 399 30 1 4128 4525 345097226 345096828 8.500000e-157 564.0
37 TraesCS6B01G337300 chr5D 92.231 399 30 1 4128 4525 370461111 370460713 8.500000e-157 564.0
38 TraesCS6B01G337300 chr3D 92.911 395 27 1 4132 4525 528807867 528808261 1.410000e-159 573.0
39 TraesCS6B01G337300 chr5A 92.481 399 28 2 4128 4525 211614555 211614158 1.830000e-158 569.0
40 TraesCS6B01G337300 chr5A 88.406 69 2 4 13 75 569791438 569791506 1.350000e-10 78.7
41 TraesCS6B01G337300 chr2D 92.658 395 28 1 4132 4525 555569139 555569533 6.570000e-158 568.0
42 TraesCS6B01G337300 chr1B 80.279 573 93 12 1025 1591 665410260 665409702 9.060000e-112 414.0
43 TraesCS6B01G337300 chr1B 97.561 41 1 0 1675 1715 269297763 269297723 2.260000e-08 71.3
44 TraesCS6B01G337300 chr1D 79.895 572 97 10 1025 1591 478156878 478156320 1.960000e-108 403.0
45 TraesCS6B01G337300 chrUn 95.000 60 3 0 16 75 65136751 65136692 1.340000e-15 95.3
46 TraesCS6B01G337300 chrUn 88.000 75 9 0 1 75 65136695 65136769 6.230000e-14 89.8
47 TraesCS6B01G337300 chr5B 97.561 41 1 0 1675 1715 447194713 447194753 2.260000e-08 71.3
48 TraesCS6B01G337300 chr3B 85.507 69 8 1 4 70 422197983 422198051 2.260000e-08 71.3
49 TraesCS6B01G337300 chr1A 85.915 71 4 3 13 77 186994660 186994590 2.260000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G337300 chr6B 593710934 593715458 4524 False 8357.000000 8357 100.000000 1 4525 1 chr6B.!!$F1 4524
1 TraesCS6B01G337300 chr6D 397081489 397085444 3955 False 1876.666667 4497 89.379333 116 4130 3 chr6D.!!$F1 4014
2 TraesCS6B01G337300 chr6A 543394418 543397886 3468 False 1609.000000 4322 88.219667 528 4130 3 chr6A.!!$F1 3602
3 TraesCS6B01G337300 chr7B 109702377 109704717 2340 False 473.250000 1325 89.313250 983 3235 4 chr7B.!!$F2 2252
4 TraesCS6B01G337300 chr7D 146862901 146865218 2317 False 471.000000 1308 87.738500 983 3235 4 chr7D.!!$F3 2252
5 TraesCS6B01G337300 chr7A 148415087 148417632 2545 False 474.500000 1284 88.073750 983 3378 4 chr7A.!!$F1 2395
6 TraesCS6B01G337300 chr4D 109469594 109470403 809 False 660.000000 660 81.763000 1001 1798 1 chr4D.!!$F1 797
7 TraesCS6B01G337300 chr4A 466940830 466941639 809 True 660.000000 660 81.740000 1001 1798 1 chr4A.!!$R1 797
8 TraesCS6B01G337300 chr4B 170927034 170927843 809 False 649.000000 649 81.518000 1001 1798 1 chr4B.!!$F2 797
9 TraesCS6B01G337300 chr1B 665409702 665410260 558 True 414.000000 414 80.279000 1025 1591 1 chr1B.!!$R2 566
10 TraesCS6B01G337300 chr1D 478156320 478156878 558 True 403.000000 403 79.895000 1025 1591 1 chr1D.!!$R1 566

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
943 999 0.107214 GGATCCACTCCATTGGCGAA 60.107 55.0 6.95 0.0 44.26 4.70 F
2782 2939 0.390340 TTGCTGACTCGATCTGGTGC 60.390 55.0 0.00 0.0 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2787 2944 0.320771 ATGAACAGACCTGCACGTCC 60.321 55.0 11.61 0.0 32.91 4.79 R
4282 4650 0.032130 GATGCAGATCCGAACGGCTA 59.968 55.0 8.48 0.0 34.68 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.159322 TCACTCCCTTCGATAATATAAGAGC 57.841 40.000 0.00 0.00 0.00 4.09
25 26 6.030849 CACTCCCTTCGATAATATAAGAGCG 58.969 44.000 0.00 0.00 0.00 5.03
26 27 5.711036 ACTCCCTTCGATAATATAAGAGCGT 59.289 40.000 0.00 0.00 0.00 5.07
27 28 6.208994 ACTCCCTTCGATAATATAAGAGCGTT 59.791 38.462 0.00 0.00 0.00 4.84
28 29 6.989659 TCCCTTCGATAATATAAGAGCGTTT 58.010 36.000 0.00 0.00 0.00 3.60
29 30 7.439381 TCCCTTCGATAATATAAGAGCGTTTT 58.561 34.615 0.00 0.00 0.00 2.43
30 31 7.929785 TCCCTTCGATAATATAAGAGCGTTTTT 59.070 33.333 0.00 0.00 0.00 1.94
31 32 8.009974 CCCTTCGATAATATAAGAGCGTTTTTG 58.990 37.037 0.00 0.00 0.00 2.44
32 33 8.761497 CCTTCGATAATATAAGAGCGTTTTTGA 58.239 33.333 0.00 0.00 0.00 2.69
33 34 9.569212 CTTCGATAATATAAGAGCGTTTTTGAC 57.431 33.333 0.00 0.00 0.00 3.18
34 35 8.637281 TCGATAATATAAGAGCGTTTTTGACA 57.363 30.769 0.00 0.00 0.00 3.58
35 36 8.537223 TCGATAATATAAGAGCGTTTTTGACAC 58.463 33.333 0.00 0.00 0.00 3.67
36 37 7.522884 CGATAATATAAGAGCGTTTTTGACACG 59.477 37.037 0.00 0.00 40.75 4.49
37 38 6.476243 AATATAAGAGCGTTTTTGACACGT 57.524 33.333 0.00 0.00 39.92 4.49
38 39 2.452006 AAGAGCGTTTTTGACACGTG 57.548 45.000 15.48 15.48 39.92 4.49
39 40 1.365699 AGAGCGTTTTTGACACGTGT 58.634 45.000 23.64 23.64 39.92 4.49
40 41 1.326548 AGAGCGTTTTTGACACGTGTC 59.673 47.619 36.01 36.01 44.97 3.67
70 71 8.415950 ACACTCTTATATTATGAGACAGAGGG 57.584 38.462 0.00 0.00 36.55 4.30
71 72 8.228206 ACACTCTTATATTATGAGACAGAGGGA 58.772 37.037 2.59 0.00 34.50 4.20
72 73 8.739039 CACTCTTATATTATGAGACAGAGGGAG 58.261 40.741 0.00 0.00 32.92 4.30
73 74 8.452868 ACTCTTATATTATGAGACAGAGGGAGT 58.547 37.037 0.00 0.00 34.90 3.85
74 75 9.967451 CTCTTATATTATGAGACAGAGGGAGTA 57.033 37.037 0.00 0.00 33.20 2.59
75 76 9.742144 TCTTATATTATGAGACAGAGGGAGTAC 57.258 37.037 0.00 0.00 0.00 2.73
76 77 9.521841 CTTATATTATGAGACAGAGGGAGTACA 57.478 37.037 0.00 0.00 0.00 2.90
82 83 9.877222 TTATGAGACAGAGGGAGTACATATAAA 57.123 33.333 0.00 0.00 0.00 1.40
83 84 7.825331 TGAGACAGAGGGAGTACATATAAAG 57.175 40.000 0.00 0.00 0.00 1.85
84 85 6.265649 TGAGACAGAGGGAGTACATATAAAGC 59.734 42.308 0.00 0.00 0.00 3.51
85 86 6.136857 AGACAGAGGGAGTACATATAAAGCA 58.863 40.000 0.00 0.00 0.00 3.91
86 87 6.041069 AGACAGAGGGAGTACATATAAAGCAC 59.959 42.308 0.00 0.00 0.00 4.40
87 88 5.221263 ACAGAGGGAGTACATATAAAGCACG 60.221 44.000 0.00 0.00 0.00 5.34
88 89 4.281182 AGAGGGAGTACATATAAAGCACGG 59.719 45.833 0.00 0.00 0.00 4.94
89 90 4.220724 AGGGAGTACATATAAAGCACGGA 58.779 43.478 0.00 0.00 0.00 4.69
90 91 4.838986 AGGGAGTACATATAAAGCACGGAT 59.161 41.667 0.00 0.00 0.00 4.18
91 92 6.014647 AGGGAGTACATATAAAGCACGGATA 58.985 40.000 0.00 0.00 0.00 2.59
92 93 6.668283 AGGGAGTACATATAAAGCACGGATAT 59.332 38.462 0.00 0.00 0.00 1.63
93 94 6.979238 GGGAGTACATATAAAGCACGGATATC 59.021 42.308 0.00 0.00 0.00 1.63
94 95 6.691818 GGAGTACATATAAAGCACGGATATCG 59.308 42.308 0.00 0.00 45.88 2.92
95 96 6.034591 AGTACATATAAAGCACGGATATCGC 58.965 40.000 0.00 0.00 43.89 4.58
96 97 4.181578 ACATATAAAGCACGGATATCGCC 58.818 43.478 0.00 0.00 43.89 5.54
97 98 2.094762 ATAAAGCACGGATATCGCCC 57.905 50.000 0.00 0.00 43.89 6.13
98 99 0.753867 TAAAGCACGGATATCGCCCA 59.246 50.000 0.00 0.00 43.89 5.36
99 100 0.108585 AAAGCACGGATATCGCCCAT 59.891 50.000 0.00 0.00 43.89 4.00
100 101 0.973632 AAGCACGGATATCGCCCATA 59.026 50.000 0.00 0.00 43.89 2.74
101 102 0.973632 AGCACGGATATCGCCCATAA 59.026 50.000 0.00 0.00 43.89 1.90
102 103 1.346395 AGCACGGATATCGCCCATAAA 59.654 47.619 0.00 0.00 43.89 1.40
103 104 2.027192 AGCACGGATATCGCCCATAAAT 60.027 45.455 0.00 0.00 43.89 1.40
104 105 2.095853 GCACGGATATCGCCCATAAATG 59.904 50.000 0.00 0.00 43.89 2.32
105 106 2.677836 CACGGATATCGCCCATAAATGG 59.322 50.000 1.72 1.72 44.02 3.16
106 107 2.569853 ACGGATATCGCCCATAAATGGA 59.430 45.455 10.67 0.00 46.39 3.41
107 108 3.008594 ACGGATATCGCCCATAAATGGAA 59.991 43.478 10.67 0.00 46.39 3.53
108 109 4.505918 ACGGATATCGCCCATAAATGGAAA 60.506 41.667 10.67 0.00 46.39 3.13
109 110 6.317676 ACGGATATCGCCCATAAATGGAAAG 61.318 44.000 10.67 1.91 46.39 2.62
126 127 0.736325 AAGCGTAGACCGTGTGCATC 60.736 55.000 0.00 0.00 39.32 3.91
130 131 1.542544 GTAGACCGTGTGCATCGTAC 58.457 55.000 11.93 5.91 0.00 3.67
168 169 6.599244 CCTAGAATTGATACTGGTGCTGAAAA 59.401 38.462 0.00 0.00 0.00 2.29
169 170 7.284034 CCTAGAATTGATACTGGTGCTGAAAAT 59.716 37.037 0.00 0.00 0.00 1.82
171 172 8.757982 AGAATTGATACTGGTGCTGAAAATAT 57.242 30.769 0.00 0.00 0.00 1.28
176 177 7.056006 TGATACTGGTGCTGAAAATATGTCAT 58.944 34.615 0.00 0.00 0.00 3.06
242 243 2.574369 AGGAACCATTTGTCCGACCATA 59.426 45.455 0.00 0.00 0.00 2.74
258 260 2.731571 ATAGGCCATGTCGCGGTGT 61.732 57.895 6.13 0.00 0.00 4.16
282 284 2.512286 CGTGCATCCGAGCCATGT 60.512 61.111 0.00 0.00 0.00 3.21
283 285 2.816360 CGTGCATCCGAGCCATGTG 61.816 63.158 0.00 0.00 0.00 3.21
301 303 8.374743 AGCCATGTGGTGACTTTTATTTATTTT 58.625 29.630 0.35 0.00 37.57 1.82
302 304 8.998377 GCCATGTGGTGACTTTTATTTATTTTT 58.002 29.630 0.35 0.00 37.57 1.94
336 338 9.793259 TGACAATCTTGTAAATTTAGTCCTCTT 57.207 29.630 0.00 0.00 42.43 2.85
345 347 8.607713 TGTAAATTTAGTCCTCTTATTGACCCA 58.392 33.333 0.00 0.00 31.76 4.51
378 380 8.477419 AACTTATTTTCAAATCTGACCTCCAA 57.523 30.769 0.00 0.00 0.00 3.53
381 383 5.514274 TTTTCAAATCTGACCTCCAACAC 57.486 39.130 0.00 0.00 0.00 3.32
387 389 2.229792 TCTGACCTCCAACACAAATGC 58.770 47.619 0.00 0.00 0.00 3.56
395 397 1.472376 CCAACACAAATGCCAAACCGT 60.472 47.619 0.00 0.00 0.00 4.83
408 410 3.241091 GCCAAACCGTTTGACGTTTTTAG 59.759 43.478 22.93 6.23 43.26 1.85
420 422 2.540931 ACGTTTTTAGTACACGCTGTGG 59.459 45.455 12.18 0.00 37.94 4.17
433 435 2.008752 GCTGTGGCGCCAAATTATTT 57.991 45.000 34.66 0.00 0.00 1.40
469 471 7.644945 ACGTGTATTAAAAGGTAAAACAGTTGC 59.355 33.333 0.00 0.00 0.00 4.17
471 473 9.524106 GTGTATTAAAAGGTAAAACAGTTGCTT 57.476 29.630 0.00 0.00 0.00 3.91
472 474 9.522804 TGTATTAAAAGGTAAAACAGTTGCTTG 57.477 29.630 0.00 0.00 0.00 4.01
473 475 6.895607 TTAAAAGGTAAAACAGTTGCTTGC 57.104 33.333 0.00 0.00 0.00 4.01
474 476 2.774439 AGGTAAAACAGTTGCTTGCG 57.226 45.000 0.00 0.00 0.00 4.85
475 477 2.294074 AGGTAAAACAGTTGCTTGCGA 58.706 42.857 0.00 0.00 0.00 5.10
476 478 2.884639 AGGTAAAACAGTTGCTTGCGAT 59.115 40.909 0.00 0.00 0.00 4.58
477 479 4.069304 AGGTAAAACAGTTGCTTGCGATA 58.931 39.130 0.00 0.00 0.00 2.92
480 482 5.342259 GGTAAAACAGTTGCTTGCGATAAAG 59.658 40.000 0.00 0.00 0.00 1.85
516 519 5.523438 TGGTGTTTTTGTTGGGTTAGATC 57.477 39.130 0.00 0.00 0.00 2.75
521 524 6.695713 GTGTTTTTGTTGGGTTAGATCTCAAC 59.304 38.462 14.90 14.90 39.68 3.18
523 526 7.069331 TGTTTTTGTTGGGTTAGATCTCAACAT 59.931 33.333 21.63 0.00 45.57 2.71
589 608 4.210093 CCGTGCCGGGCGTATGTA 62.210 66.667 15.40 0.00 44.15 2.29
590 609 2.657296 CGTGCCGGGCGTATGTAG 60.657 66.667 15.40 0.00 0.00 2.74
591 610 2.279918 GTGCCGGGCGTATGTAGG 60.280 66.667 15.40 0.00 0.00 3.18
663 683 3.320541 ACTGCATCTGCTACTCTCCATAC 59.679 47.826 3.53 0.00 42.66 2.39
664 684 2.630098 TGCATCTGCTACTCTCCATACC 59.370 50.000 3.53 0.00 42.66 2.73
665 685 2.630098 GCATCTGCTACTCTCCATACCA 59.370 50.000 0.00 0.00 38.21 3.25
666 686 3.553922 GCATCTGCTACTCTCCATACCAC 60.554 52.174 0.00 0.00 38.21 4.16
691 711 2.538790 TTGGCTCCTCACCAACTCA 58.461 52.632 0.00 0.00 42.23 3.41
692 712 1.067295 TTGGCTCCTCACCAACTCAT 58.933 50.000 0.00 0.00 42.23 2.90
732 778 3.554342 CCGAGATGCAGGGGAGGG 61.554 72.222 0.00 0.00 0.00 4.30
860 916 1.525995 CCACACCACACACCCTCAC 60.526 63.158 0.00 0.00 0.00 3.51
861 917 1.525995 CACACCACACACCCTCACC 60.526 63.158 0.00 0.00 0.00 4.02
862 918 2.113139 CACCACACACCCTCACCC 59.887 66.667 0.00 0.00 0.00 4.61
863 919 3.175710 ACCACACACCCTCACCCC 61.176 66.667 0.00 0.00 0.00 4.95
864 920 3.966543 CCACACACCCTCACCCCC 61.967 72.222 0.00 0.00 0.00 5.40
891 947 2.383527 CCAGCTCGTCCGCAAAGAC 61.384 63.158 0.00 0.00 0.00 3.01
910 966 4.567385 GAGCTGAGGCCGAGAGCG 62.567 72.222 15.38 0.00 45.17 5.03
927 983 3.910490 GCGAGCGAGCCAGAGGAT 61.910 66.667 0.00 0.00 0.00 3.24
928 984 2.334653 CGAGCGAGCCAGAGGATC 59.665 66.667 0.00 0.00 34.38 3.36
929 985 2.733945 GAGCGAGCCAGAGGATCC 59.266 66.667 2.48 2.48 34.17 3.36
930 986 2.042537 AGCGAGCCAGAGGATCCA 60.043 61.111 15.82 0.00 34.17 3.41
931 987 2.107953 GCGAGCCAGAGGATCCAC 59.892 66.667 15.82 8.01 34.17 4.02
932 988 2.430610 GCGAGCCAGAGGATCCACT 61.431 63.158 15.82 10.73 34.17 4.00
933 989 1.739049 CGAGCCAGAGGATCCACTC 59.261 63.158 15.82 10.99 34.17 3.51
934 990 1.743321 CGAGCCAGAGGATCCACTCC 61.743 65.000 15.82 6.40 45.33 3.85
941 997 4.147701 GGATCCACTCCATTGGCG 57.852 61.111 6.95 0.00 44.26 5.69
942 998 1.526887 GGATCCACTCCATTGGCGA 59.473 57.895 6.95 0.00 44.26 5.54
943 999 0.107214 GGATCCACTCCATTGGCGAA 60.107 55.000 6.95 0.00 44.26 4.70
944 1000 1.017387 GATCCACTCCATTGGCGAAC 58.983 55.000 0.00 0.00 36.48 3.95
945 1001 0.744414 ATCCACTCCATTGGCGAACG 60.744 55.000 0.00 0.00 36.48 3.95
946 1002 1.375396 CCACTCCATTGGCGAACGA 60.375 57.895 0.00 0.00 0.00 3.85
947 1003 1.361668 CCACTCCATTGGCGAACGAG 61.362 60.000 0.00 6.01 0.00 4.18
948 1004 1.741770 ACTCCATTGGCGAACGAGC 60.742 57.895 0.00 0.00 0.00 5.03
1578 1643 1.421485 CAGCAACGCAATCGAGACC 59.579 57.895 0.00 0.00 39.41 3.85
1800 1874 3.151710 TACTCCATGGTCGGCCGG 61.152 66.667 27.83 8.55 37.67 6.13
1975 2055 2.282180 GACCAAAGAAGCCGGCCA 60.282 61.111 26.15 0.00 0.00 5.36
2117 2224 1.463674 CCCCGCAAAAGTAGCAATCT 58.536 50.000 0.00 0.00 0.00 2.40
2120 2234 2.096496 CCCGCAAAAGTAGCAATCTCTG 59.904 50.000 0.00 0.00 0.00 3.35
2133 2247 2.015456 ATCTCTGTCACCAGTCACCA 57.985 50.000 0.00 0.00 39.82 4.17
2140 2254 1.597854 CACCAGTCACCACGCACAT 60.598 57.895 0.00 0.00 0.00 3.21
2154 2268 1.400113 CGCACATGCTCGATTTGTTGT 60.400 47.619 1.82 0.00 39.32 3.32
2164 2278 4.553156 GCTCGATTTGTTGTTGGTTTCGTA 60.553 41.667 0.00 0.00 0.00 3.43
2180 2294 1.205179 TCGTAGGCTAATTTGTCCGCA 59.795 47.619 0.00 0.00 0.00 5.69
2236 2353 0.693767 ATGGAGCCAAGGAGAGGGAG 60.694 60.000 0.00 0.00 0.00 4.30
2348 2477 0.742990 GGACCCGAACAATGCGATGA 60.743 55.000 0.00 0.00 0.00 2.92
2578 2719 3.044305 GCTTGTCTCGTTGCCGCT 61.044 61.111 0.00 0.00 0.00 5.52
2782 2939 0.390340 TTGCTGACTCGATCTGGTGC 60.390 55.000 0.00 0.00 0.00 5.01
2783 2940 1.253593 TGCTGACTCGATCTGGTGCT 61.254 55.000 0.00 0.00 0.00 4.40
2784 2941 0.527385 GCTGACTCGATCTGGTGCTC 60.527 60.000 0.00 0.00 0.00 4.26
2786 2943 0.960861 TGACTCGATCTGGTGCTCGT 60.961 55.000 0.00 0.00 36.33 4.18
2787 2944 0.524392 GACTCGATCTGGTGCTCGTG 60.524 60.000 0.00 0.00 36.33 4.35
3012 3180 4.039852 GGTGAAAAGCAGGGGATAAACAAA 59.960 41.667 0.00 0.00 0.00 2.83
3056 3224 1.145119 GTGTCCCTTCTTTTCCCCAGT 59.855 52.381 0.00 0.00 0.00 4.00
3083 3251 3.049674 CTCCTGCTTTCGCGCCAA 61.050 61.111 0.00 0.00 39.65 4.52
3094 3262 3.922640 GCGCCAACAAAAGCCCCA 61.923 61.111 0.00 0.00 0.00 4.96
3202 3468 1.272769 GTCTTCGCCAAGGAGTACAGT 59.727 52.381 0.00 0.00 0.00 3.55
3226 3492 2.659063 CCCCGACATCCTCAGCACA 61.659 63.158 0.00 0.00 0.00 4.57
3274 3568 3.335356 ATGCTCCAGTCCGGCAAGG 62.335 63.158 0.00 0.00 39.46 3.61
3394 3725 1.065491 AGCGCCACATGTAAAGATCCA 60.065 47.619 2.29 0.00 0.00 3.41
3478 3816 2.094700 GGGGCTCTTCATTTTTCGTTCC 60.095 50.000 0.00 0.00 0.00 3.62
3496 3834 1.286257 TCCCTCTCTCTAGAGCAGCAA 59.714 52.381 15.35 0.00 46.84 3.91
3505 3843 4.898265 TCTCTAGAGCAGCAAGATAATGGT 59.102 41.667 15.35 0.00 0.00 3.55
3689 4040 0.451783 CGCTGACCCCTGTAAAATGC 59.548 55.000 0.00 0.00 0.00 3.56
3695 4046 1.193323 CCCCTGTAAAATGCATGCCA 58.807 50.000 16.68 3.38 0.00 4.92
3732 4083 6.545666 ACTGACCTTGATTGTGTTGTTCATTA 59.454 34.615 0.00 0.00 0.00 1.90
3827 4187 2.232208 TCTCATGTCGTGCTGATGAAGT 59.768 45.455 0.00 0.00 0.00 3.01
3891 4252 3.004171 ACACAGCGCCAAATCGTTATAA 58.996 40.909 2.29 0.00 0.00 0.98
3892 4253 3.181514 ACACAGCGCCAAATCGTTATAAC 60.182 43.478 2.29 5.47 0.00 1.89
3893 4254 3.004171 ACAGCGCCAAATCGTTATAACA 58.996 40.909 15.67 3.66 0.00 2.41
3894 4255 3.063452 ACAGCGCCAAATCGTTATAACAG 59.937 43.478 15.67 8.44 0.00 3.16
3895 4256 3.063452 CAGCGCCAAATCGTTATAACAGT 59.937 43.478 15.67 0.47 0.00 3.55
3896 4257 3.063452 AGCGCCAAATCGTTATAACAGTG 59.937 43.478 15.67 7.03 0.00 3.66
3897 4258 3.062909 GCGCCAAATCGTTATAACAGTGA 59.937 43.478 15.67 5.41 0.00 3.41
3898 4259 4.260620 GCGCCAAATCGTTATAACAGTGAT 60.261 41.667 15.67 7.41 0.00 3.06
3899 4260 5.197549 CGCCAAATCGTTATAACAGTGATG 58.802 41.667 15.67 7.26 0.00 3.07
3900 4261 5.510671 GCCAAATCGTTATAACAGTGATGG 58.489 41.667 15.67 15.30 0.00 3.51
3901 4262 5.505654 GCCAAATCGTTATAACAGTGATGGG 60.506 44.000 15.67 14.09 0.00 4.00
3902 4263 5.505654 CCAAATCGTTATAACAGTGATGGGC 60.506 44.000 15.67 0.00 0.00 5.36
3903 4264 3.897141 TCGTTATAACAGTGATGGGCA 57.103 42.857 15.67 0.00 0.00 5.36
3904 4265 3.792401 TCGTTATAACAGTGATGGGCAG 58.208 45.455 15.67 0.00 0.00 4.85
3905 4266 2.287915 CGTTATAACAGTGATGGGCAGC 59.712 50.000 15.67 0.00 0.00 5.25
3906 4267 3.545703 GTTATAACAGTGATGGGCAGCT 58.454 45.455 10.81 0.00 0.00 4.24
3907 4268 2.814805 ATAACAGTGATGGGCAGCTT 57.185 45.000 0.00 0.00 0.00 3.74
3908 4269 2.584835 TAACAGTGATGGGCAGCTTT 57.415 45.000 0.00 0.00 0.00 3.51
3909 4270 1.708341 AACAGTGATGGGCAGCTTTT 58.292 45.000 0.00 0.00 0.00 2.27
3910 4271 1.708341 ACAGTGATGGGCAGCTTTTT 58.292 45.000 0.00 0.00 0.00 1.94
3939 4300 2.682352 TGACACAACACAACAGTGATGG 59.318 45.455 5.30 0.00 39.51 3.51
3947 4308 0.892358 CAACAGTGATGGGCAGCTGT 60.892 55.000 16.64 0.00 39.14 4.40
3948 4309 0.178981 AACAGTGATGGGCAGCTGTT 60.179 50.000 16.64 0.00 40.61 3.16
3969 4330 5.476599 TGTTATGGCTGTGCTTGATTAAGTT 59.523 36.000 0.00 0.00 36.27 2.66
3970 4331 3.921119 TGGCTGTGCTTGATTAAGTTG 57.079 42.857 0.00 0.00 36.27 3.16
3971 4332 3.485394 TGGCTGTGCTTGATTAAGTTGA 58.515 40.909 0.00 0.00 36.27 3.18
3972 4333 3.503363 TGGCTGTGCTTGATTAAGTTGAG 59.497 43.478 0.00 0.00 36.27 3.02
3973 4334 3.496155 GCTGTGCTTGATTAAGTTGAGC 58.504 45.455 0.00 0.87 36.27 4.26
3974 4335 3.190118 GCTGTGCTTGATTAAGTTGAGCT 59.810 43.478 0.00 0.00 36.27 4.09
3975 4336 4.720090 CTGTGCTTGATTAAGTTGAGCTG 58.280 43.478 0.00 0.00 36.27 4.24
3976 4337 4.136796 TGTGCTTGATTAAGTTGAGCTGT 58.863 39.130 0.00 0.00 36.27 4.40
3988 4349 1.372683 GAGCTGTTGAGGCCACAGA 59.627 57.895 22.44 5.04 33.65 3.41
4024 4385 2.026641 CCGGCCATTCAAATCAGTGAT 58.973 47.619 2.24 0.00 0.00 3.06
4027 4388 3.025978 GGCCATTCAAATCAGTGATCCA 58.974 45.455 5.98 0.00 0.00 3.41
4030 4395 4.500887 GCCATTCAAATCAGTGATCCATGG 60.501 45.833 19.37 19.37 36.85 3.66
4036 4401 5.183713 TCAAATCAGTGATCCATGGTTTGAC 59.816 40.000 22.33 5.31 46.37 3.18
4074 4442 1.807742 GTTGTGTGCGGCCAATTAGTA 59.192 47.619 2.24 0.00 0.00 1.82
4095 4463 1.068474 CCGGACGACTTAAGTTGCAG 58.932 55.000 20.80 14.02 32.66 4.41
4125 4493 1.883275 CGCCACCATGAAAACAGGTAA 59.117 47.619 0.00 0.00 33.49 2.85
4135 4503 2.048503 ACAGGTAACGGTCTGCGC 60.049 61.111 0.00 0.00 43.47 6.09
4136 4504 2.048597 CAGGTAACGGTCTGCGCA 60.049 61.111 10.98 10.98 46.39 6.09
4137 4505 2.048503 AGGTAACGGTCTGCGCAC 60.049 61.111 5.66 0.00 46.39 5.34
4138 4506 3.116531 GGTAACGGTCTGCGCACC 61.117 66.667 5.66 6.46 0.00 5.01
4139 4507 3.116531 GTAACGGTCTGCGCACCC 61.117 66.667 5.66 8.87 31.99 4.61
4140 4508 4.728102 TAACGGTCTGCGCACCCG 62.728 66.667 31.46 31.46 46.93 5.28
4160 4528 2.362375 GGCTGGATTTGGGGCGAA 60.362 61.111 0.00 0.00 0.00 4.70
4161 4529 1.758122 GGCTGGATTTGGGGCGAAT 60.758 57.895 0.00 0.00 0.00 3.34
4162 4530 1.735973 GCTGGATTTGGGGCGAATC 59.264 57.895 0.00 0.00 34.46 2.52
4164 4532 3.432186 GGATTTGGGGCGAATCCG 58.568 61.111 9.26 0.00 42.39 4.18
4165 4533 2.193536 GGATTTGGGGCGAATCCGG 61.194 63.158 0.00 0.00 42.39 5.14
4166 4534 1.453197 GATTTGGGGCGAATCCGGT 60.453 57.895 0.00 0.00 36.06 5.28
4167 4535 1.444917 GATTTGGGGCGAATCCGGTC 61.445 60.000 0.00 0.00 36.06 4.79
4168 4536 3.961838 TTTGGGGCGAATCCGGTCG 62.962 63.158 9.95 9.95 43.98 4.79
4171 4539 4.886121 GGGCGAATCCGGTCGGTC 62.886 72.222 15.38 0.78 41.40 4.79
4172 4540 3.834799 GGCGAATCCGGTCGGTCT 61.835 66.667 15.38 0.00 41.40 3.85
4173 4541 2.183555 GCGAATCCGGTCGGTCTT 59.816 61.111 15.38 4.71 41.40 3.01
4174 4542 2.165301 GCGAATCCGGTCGGTCTTG 61.165 63.158 15.38 3.38 41.40 3.02
4175 4543 1.509463 CGAATCCGGTCGGTCTTGA 59.491 57.895 9.36 0.00 37.37 3.02
4176 4544 0.525668 CGAATCCGGTCGGTCTTGAG 60.526 60.000 9.36 0.00 37.37 3.02
4177 4545 0.806492 GAATCCGGTCGGTCTTGAGC 60.806 60.000 9.36 0.00 36.47 4.26
4178 4546 1.258445 AATCCGGTCGGTCTTGAGCT 61.258 55.000 9.36 0.00 34.27 4.09
4179 4547 1.668101 ATCCGGTCGGTCTTGAGCTC 61.668 60.000 6.82 6.82 34.27 4.09
4180 4548 2.636412 CCGGTCGGTCTTGAGCTCA 61.636 63.158 13.74 13.74 34.27 4.26
4181 4549 1.513158 CGGTCGGTCTTGAGCTCAT 59.487 57.895 19.04 0.00 34.27 2.90
4182 4550 0.526524 CGGTCGGTCTTGAGCTCATC 60.527 60.000 19.04 11.03 34.27 2.92
4183 4551 0.179097 GGTCGGTCTTGAGCTCATCC 60.179 60.000 19.04 18.15 33.66 3.51
4184 4552 0.526524 GTCGGTCTTGAGCTCATCCG 60.527 60.000 31.40 31.40 36.81 4.18
4185 4553 1.227089 CGGTCTTGAGCTCATCCGG 60.227 63.158 30.46 19.63 34.18 5.14
4186 4554 1.522580 GGTCTTGAGCTCATCCGGC 60.523 63.158 19.04 10.56 0.00 6.13
4187 4555 1.519719 GTCTTGAGCTCATCCGGCT 59.480 57.895 19.04 0.00 43.26 5.52
4188 4556 0.809241 GTCTTGAGCTCATCCGGCTG 60.809 60.000 19.04 0.00 40.40 4.85
4189 4557 1.220206 CTTGAGCTCATCCGGCTGT 59.780 57.895 19.04 0.00 40.40 4.40
4190 4558 1.078918 TTGAGCTCATCCGGCTGTG 60.079 57.895 19.04 3.95 40.40 3.66
4191 4559 2.202987 GAGCTCATCCGGCTGTGG 60.203 66.667 9.40 1.25 40.40 4.17
4192 4560 3.746949 GAGCTCATCCGGCTGTGGG 62.747 68.421 9.40 0.92 40.40 4.61
4193 4561 3.785859 GCTCATCCGGCTGTGGGA 61.786 66.667 5.00 0.00 38.10 4.37
4194 4562 2.503061 CTCATCCGGCTGTGGGAG 59.497 66.667 5.00 0.00 36.91 4.30
4195 4563 2.038813 TCATCCGGCTGTGGGAGA 59.961 61.111 5.00 0.00 36.91 3.71
4196 4564 2.187946 CATCCGGCTGTGGGAGAC 59.812 66.667 0.00 0.00 36.91 3.36
4223 4591 4.108299 CCATGTACTGGCCGGGCA 62.108 66.667 30.71 30.71 38.47 5.36
4224 4592 2.824041 CATGTACTGGCCGGGCAC 60.824 66.667 29.27 18.54 0.00 5.01
4266 4634 4.124351 CGCAAGGCCACATGCAGG 62.124 66.667 22.76 0.00 42.68 4.85
4273 4641 3.755628 CCACATGCAGGCAGTGGC 61.756 66.667 21.36 9.02 45.39 5.01
4274 4642 2.675423 CACATGCAGGCAGTGGCT 60.675 61.111 14.51 14.51 40.87 4.75
4275 4643 2.360852 ACATGCAGGCAGTGGCTC 60.361 61.111 17.69 12.15 40.87 4.70
4276 4644 3.138798 CATGCAGGCAGTGGCTCC 61.139 66.667 17.69 8.79 40.87 4.70
4277 4645 3.336568 ATGCAGGCAGTGGCTCCT 61.337 61.111 17.69 0.00 40.87 3.69
4278 4646 3.341202 ATGCAGGCAGTGGCTCCTC 62.341 63.158 17.69 9.49 40.87 3.71
4279 4647 4.792804 GCAGGCAGTGGCTCCTCC 62.793 72.222 17.69 1.88 40.87 4.30
4280 4648 3.007920 CAGGCAGTGGCTCCTCCT 61.008 66.667 17.69 0.00 40.87 3.69
4281 4649 2.686835 AGGCAGTGGCTCCTCCTC 60.687 66.667 14.51 0.00 40.87 3.71
4282 4650 2.686835 GGCAGTGGCTCCTCCTCT 60.687 66.667 9.90 0.00 39.15 3.69
4283 4651 1.381872 GGCAGTGGCTCCTCCTCTA 60.382 63.158 9.90 0.00 36.59 2.43
4284 4652 1.398958 GGCAGTGGCTCCTCCTCTAG 61.399 65.000 9.90 0.00 36.59 2.43
4285 4653 2.026945 GCAGTGGCTCCTCCTCTAGC 62.027 65.000 0.00 0.00 36.59 3.42
4289 4657 3.942601 GCTCCTCCTCTAGCCGTT 58.057 61.111 0.00 0.00 32.40 4.44
4290 4658 1.737201 GCTCCTCCTCTAGCCGTTC 59.263 63.158 0.00 0.00 32.40 3.95
4291 4659 2.026522 CTCCTCCTCTAGCCGTTCG 58.973 63.158 0.00 0.00 0.00 3.95
4292 4660 1.448922 CTCCTCCTCTAGCCGTTCGG 61.449 65.000 6.90 6.90 0.00 4.30
4293 4661 1.453379 CCTCCTCTAGCCGTTCGGA 60.453 63.158 15.69 0.00 0.00 4.55
4294 4662 0.824182 CCTCCTCTAGCCGTTCGGAT 60.824 60.000 15.69 11.49 0.00 4.18
4295 4663 0.594110 CTCCTCTAGCCGTTCGGATC 59.406 60.000 15.69 0.00 0.00 3.36
4296 4664 0.183014 TCCTCTAGCCGTTCGGATCT 59.817 55.000 15.69 6.07 0.00 2.75
4297 4665 0.312416 CCTCTAGCCGTTCGGATCTG 59.688 60.000 15.69 5.84 0.00 2.90
4298 4666 0.318275 CTCTAGCCGTTCGGATCTGC 60.318 60.000 15.69 0.00 0.00 4.26
4299 4667 1.035385 TCTAGCCGTTCGGATCTGCA 61.035 55.000 15.69 0.00 0.00 4.41
4300 4668 0.032678 CTAGCCGTTCGGATCTGCAT 59.967 55.000 15.69 0.00 0.00 3.96
4301 4669 0.032130 TAGCCGTTCGGATCTGCATC 59.968 55.000 15.69 0.00 0.00 3.91
4302 4670 2.589492 GCCGTTCGGATCTGCATCG 61.589 63.158 15.69 1.62 0.00 3.84
4303 4671 1.226974 CCGTTCGGATCTGCATCGT 60.227 57.895 5.19 0.00 0.00 3.73
4304 4672 1.209275 CCGTTCGGATCTGCATCGTC 61.209 60.000 5.19 0.00 0.00 4.20
4305 4673 1.532343 CGTTCGGATCTGCATCGTCG 61.532 60.000 0.00 0.00 0.00 5.12
4306 4674 1.065764 TTCGGATCTGCATCGTCGG 59.934 57.895 0.00 0.00 0.00 4.79
4307 4675 1.663379 TTCGGATCTGCATCGTCGGT 61.663 55.000 0.00 0.00 0.00 4.69
4308 4676 1.946156 CGGATCTGCATCGTCGGTG 60.946 63.158 0.00 0.00 0.00 4.94
4309 4677 1.592669 GGATCTGCATCGTCGGTGG 60.593 63.158 7.76 0.00 0.00 4.61
4310 4678 1.141881 GATCTGCATCGTCGGTGGT 59.858 57.895 7.76 0.00 0.00 4.16
4311 4679 0.872021 GATCTGCATCGTCGGTGGTC 60.872 60.000 7.76 0.00 0.00 4.02
4312 4680 2.298158 ATCTGCATCGTCGGTGGTCC 62.298 60.000 7.76 0.00 0.00 4.46
4323 4691 3.845259 GTGGTCCGCCGGCAGATA 61.845 66.667 28.98 11.39 37.67 1.98
4324 4692 2.842462 TGGTCCGCCGGCAGATAT 60.842 61.111 28.98 0.00 37.67 1.63
4325 4693 1.532078 TGGTCCGCCGGCAGATATA 60.532 57.895 28.98 8.30 37.67 0.86
4326 4694 1.080025 GGTCCGCCGGCAGATATAC 60.080 63.158 28.98 13.67 0.00 1.47
4327 4695 1.443872 GTCCGCCGGCAGATATACG 60.444 63.158 28.98 7.02 0.00 3.06
4328 4696 1.601477 TCCGCCGGCAGATATACGA 60.601 57.895 28.98 7.80 0.00 3.43
4329 4697 1.174078 TCCGCCGGCAGATATACGAA 61.174 55.000 28.98 0.00 0.00 3.85
4330 4698 0.108804 CCGCCGGCAGATATACGAAT 60.109 55.000 28.98 0.00 0.00 3.34
4331 4699 0.992072 CGCCGGCAGATATACGAATG 59.008 55.000 28.98 0.12 0.00 2.67
4332 4700 1.359848 GCCGGCAGATATACGAATGG 58.640 55.000 24.80 0.00 0.00 3.16
4333 4701 1.359848 CCGGCAGATATACGAATGGC 58.640 55.000 0.00 0.00 35.08 4.40
4334 4702 1.337728 CCGGCAGATATACGAATGGCA 60.338 52.381 0.00 0.00 38.05 4.92
4335 4703 1.995484 CGGCAGATATACGAATGGCAG 59.005 52.381 0.00 0.00 38.05 4.85
4336 4704 2.610479 CGGCAGATATACGAATGGCAGT 60.610 50.000 0.00 0.00 38.05 4.40
4337 4705 2.996621 GGCAGATATACGAATGGCAGTC 59.003 50.000 4.57 4.57 38.07 3.51
4338 4706 2.663602 GCAGATATACGAATGGCAGTCG 59.336 50.000 32.41 32.41 44.10 4.18
4339 4707 3.245797 CAGATATACGAATGGCAGTCGG 58.754 50.000 35.71 20.52 42.82 4.79
4340 4708 1.993370 GATATACGAATGGCAGTCGGC 59.007 52.381 35.71 18.22 42.82 5.54
4361 4729 3.294493 GCTCGGTGCTTGCCCAAA 61.294 61.111 0.00 0.00 38.95 3.28
4362 4730 2.956987 CTCGGTGCTTGCCCAAAG 59.043 61.111 0.00 0.00 39.07 2.77
4369 4737 2.863153 CTTGCCCAAAGCTCGTCG 59.137 61.111 0.00 0.00 44.23 5.12
4370 4738 2.668212 TTGCCCAAAGCTCGTCGG 60.668 61.111 0.00 0.00 44.23 4.79
4371 4739 3.469863 TTGCCCAAAGCTCGTCGGT 62.470 57.895 0.00 0.00 44.23 4.69
4372 4740 3.423154 GCCCAAAGCTCGTCGGTG 61.423 66.667 0.00 0.00 38.99 4.94
4373 4741 3.423154 CCCAAAGCTCGTCGGTGC 61.423 66.667 0.00 0.00 0.00 5.01
4374 4742 2.664851 CCAAAGCTCGTCGGTGCA 60.665 61.111 12.21 0.00 35.16 4.57
4375 4743 2.551270 CAAAGCTCGTCGGTGCAC 59.449 61.111 8.80 8.80 35.16 4.57
4376 4744 2.665185 AAAGCTCGTCGGTGCACC 60.665 61.111 26.78 26.78 35.16 5.01
4377 4745 3.454587 AAAGCTCGTCGGTGCACCA 62.455 57.895 34.16 19.11 35.16 4.17
4378 4746 2.731691 AAAGCTCGTCGGTGCACCAT 62.732 55.000 34.16 8.70 35.16 3.55
4379 4747 2.731691 AAGCTCGTCGGTGCACCATT 62.732 55.000 34.16 13.92 35.16 3.16
4380 4748 3.027170 GCTCGTCGGTGCACCATTG 62.027 63.158 34.16 22.07 35.14 2.82
4389 4757 2.887360 GCACCATTGCCGCTCATT 59.113 55.556 0.00 0.00 43.66 2.57
4390 4758 2.105984 GCACCATTGCCGCTCATTA 58.894 52.632 0.00 0.00 43.66 1.90
4391 4759 0.455410 GCACCATTGCCGCTCATTAA 59.545 50.000 0.00 0.00 43.66 1.40
4392 4760 1.534595 GCACCATTGCCGCTCATTAAG 60.535 52.381 0.00 0.00 43.66 1.85
4393 4761 1.745087 CACCATTGCCGCTCATTAAGT 59.255 47.619 0.00 0.00 0.00 2.24
4394 4762 1.745087 ACCATTGCCGCTCATTAAGTG 59.255 47.619 0.00 0.00 35.13 3.16
4395 4763 1.534595 CCATTGCCGCTCATTAAGTGC 60.535 52.381 0.00 0.00 33.94 4.40
4409 4777 2.904866 GTGCGACCACTGCCCAAA 60.905 61.111 0.00 0.00 38.93 3.28
4410 4778 2.594303 TGCGACCACTGCCCAAAG 60.594 61.111 0.00 0.00 0.00 2.77
4411 4779 2.281484 GCGACCACTGCCCAAAGA 60.281 61.111 0.00 0.00 0.00 2.52
4412 4780 1.896660 GCGACCACTGCCCAAAGAA 60.897 57.895 0.00 0.00 0.00 2.52
4413 4781 1.452145 GCGACCACTGCCCAAAGAAA 61.452 55.000 0.00 0.00 0.00 2.52
4414 4782 0.593128 CGACCACTGCCCAAAGAAAG 59.407 55.000 0.00 0.00 0.00 2.62
4415 4783 1.692411 GACCACTGCCCAAAGAAAGT 58.308 50.000 0.00 0.00 0.00 2.66
4416 4784 1.609072 GACCACTGCCCAAAGAAAGTC 59.391 52.381 0.00 0.00 0.00 3.01
4417 4785 1.064017 ACCACTGCCCAAAGAAAGTCA 60.064 47.619 0.00 0.00 0.00 3.41
4418 4786 2.242043 CCACTGCCCAAAGAAAGTCAT 58.758 47.619 0.00 0.00 0.00 3.06
4419 4787 2.029649 CCACTGCCCAAAGAAAGTCATG 60.030 50.000 0.00 0.00 0.00 3.07
4420 4788 1.615392 ACTGCCCAAAGAAAGTCATGC 59.385 47.619 0.00 0.00 0.00 4.06
4421 4789 0.597568 TGCCCAAAGAAAGTCATGCG 59.402 50.000 0.00 0.00 0.00 4.73
4422 4790 0.733909 GCCCAAAGAAAGTCATGCGC 60.734 55.000 0.00 0.00 0.00 6.09
4423 4791 0.109132 CCCAAAGAAAGTCATGCGCC 60.109 55.000 4.18 0.00 0.00 6.53
4424 4792 0.454957 CCAAAGAAAGTCATGCGCCG 60.455 55.000 4.18 0.00 0.00 6.46
4425 4793 1.067199 CAAAGAAAGTCATGCGCCGC 61.067 55.000 4.18 0.00 0.00 6.53
4426 4794 2.513065 AAAGAAAGTCATGCGCCGCG 62.513 55.000 8.83 8.83 0.00 6.46
4427 4795 3.788766 GAAAGTCATGCGCCGCGT 61.789 61.111 15.34 0.00 0.00 6.01
4428 4796 3.982424 GAAAGTCATGCGCCGCGTG 62.982 63.158 24.62 24.62 45.79 5.34
4432 4800 4.123009 TCATGCGCCGCGTGTCTA 62.123 61.111 28.37 9.09 44.84 2.59
4433 4801 3.913573 CATGCGCCGCGTGTCTAC 61.914 66.667 22.54 0.00 40.30 2.59
4434 4802 4.429212 ATGCGCCGCGTGTCTACA 62.429 61.111 15.34 2.63 0.00 2.74
4435 4803 3.925362 ATGCGCCGCGTGTCTACAA 62.925 57.895 15.34 0.00 0.00 2.41
4436 4804 4.130281 GCGCCGCGTGTCTACAAC 62.130 66.667 15.34 0.00 0.00 3.32
4437 4805 3.823421 CGCCGCGTGTCTACAACG 61.823 66.667 4.92 0.00 0.00 4.10
4441 4809 3.475774 GCGTGTCTACAACGCCGG 61.476 66.667 9.65 0.00 45.77 6.13
4442 4810 2.256158 CGTGTCTACAACGCCGGA 59.744 61.111 5.05 0.00 34.78 5.14
4443 4811 1.372004 CGTGTCTACAACGCCGGAA 60.372 57.895 5.05 0.00 34.78 4.30
4444 4812 1.611592 CGTGTCTACAACGCCGGAAC 61.612 60.000 5.05 0.00 34.78 3.62
4445 4813 0.598158 GTGTCTACAACGCCGGAACA 60.598 55.000 5.05 0.00 31.92 3.18
4446 4814 0.319083 TGTCTACAACGCCGGAACAT 59.681 50.000 5.05 0.00 0.00 2.71
4447 4815 0.997196 GTCTACAACGCCGGAACATC 59.003 55.000 5.05 0.00 0.00 3.06
4448 4816 0.108520 TCTACAACGCCGGAACATCC 60.109 55.000 5.05 0.00 0.00 3.51
4449 4817 1.078988 TACAACGCCGGAACATCCC 60.079 57.895 5.05 0.00 31.13 3.85
4468 4836 2.436417 CCGAATGGGTGTTCATCAAGT 58.564 47.619 0.00 0.00 0.00 3.16
4469 4837 2.162208 CCGAATGGGTGTTCATCAAGTG 59.838 50.000 0.00 0.00 0.00 3.16
4470 4838 2.813754 CGAATGGGTGTTCATCAAGTGT 59.186 45.455 0.00 0.00 0.00 3.55
4471 4839 3.253188 CGAATGGGTGTTCATCAAGTGTT 59.747 43.478 0.00 0.00 0.00 3.32
4472 4840 4.261572 CGAATGGGTGTTCATCAAGTGTTT 60.262 41.667 0.00 0.00 0.00 2.83
4473 4841 5.049060 CGAATGGGTGTTCATCAAGTGTTTA 60.049 40.000 0.00 0.00 0.00 2.01
4474 4842 6.514212 CGAATGGGTGTTCATCAAGTGTTTAA 60.514 38.462 0.00 0.00 0.00 1.52
4475 4843 6.723298 ATGGGTGTTCATCAAGTGTTTAAA 57.277 33.333 0.00 0.00 0.00 1.52
4476 4844 6.723298 TGGGTGTTCATCAAGTGTTTAAAT 57.277 33.333 0.00 0.00 0.00 1.40
4477 4845 6.511416 TGGGTGTTCATCAAGTGTTTAAATG 58.489 36.000 0.00 0.00 0.00 2.32
4478 4846 6.322456 TGGGTGTTCATCAAGTGTTTAAATGA 59.678 34.615 0.00 0.00 0.00 2.57
4479 4847 7.015098 TGGGTGTTCATCAAGTGTTTAAATGAT 59.985 33.333 0.00 0.00 32.94 2.45
4480 4848 7.329226 GGGTGTTCATCAAGTGTTTAAATGATG 59.671 37.037 17.69 17.69 46.62 3.07
4481 4849 7.329226 GGTGTTCATCAAGTGTTTAAATGATGG 59.671 37.037 21.12 9.45 45.75 3.51
4482 4850 7.329226 GTGTTCATCAAGTGTTTAAATGATGGG 59.671 37.037 21.12 5.57 45.75 4.00
4483 4851 6.528537 TCATCAAGTGTTTAAATGATGGGG 57.471 37.500 21.12 5.05 45.75 4.96
4484 4852 6.015918 TCATCAAGTGTTTAAATGATGGGGT 58.984 36.000 21.12 0.00 45.75 4.95
4485 4853 7.178573 TCATCAAGTGTTTAAATGATGGGGTA 58.821 34.615 21.12 6.94 45.75 3.69
4486 4854 7.838696 TCATCAAGTGTTTAAATGATGGGGTAT 59.161 33.333 21.12 0.00 45.75 2.73
4487 4855 7.403312 TCAAGTGTTTAAATGATGGGGTATG 57.597 36.000 0.00 0.00 0.00 2.39
4488 4856 6.951198 TCAAGTGTTTAAATGATGGGGTATGT 59.049 34.615 0.00 0.00 0.00 2.29
4489 4857 6.773976 AGTGTTTAAATGATGGGGTATGTG 57.226 37.500 0.00 0.00 0.00 3.21
4490 4858 5.127031 AGTGTTTAAATGATGGGGTATGTGC 59.873 40.000 0.00 0.00 0.00 4.57
4491 4859 5.127031 GTGTTTAAATGATGGGGTATGTGCT 59.873 40.000 0.00 0.00 0.00 4.40
4492 4860 5.719085 TGTTTAAATGATGGGGTATGTGCTT 59.281 36.000 0.00 0.00 0.00 3.91
4493 4861 6.212388 TGTTTAAATGATGGGGTATGTGCTTT 59.788 34.615 0.00 0.00 0.00 3.51
4494 4862 6.865834 TTAAATGATGGGGTATGTGCTTTT 57.134 33.333 0.00 0.00 0.00 2.27
4495 4863 5.760484 AAATGATGGGGTATGTGCTTTTT 57.240 34.783 0.00 0.00 0.00 1.94
4519 4887 9.672673 TTTTTAGCTTCAGTTTATGCTCTAGAT 57.327 29.630 0.00 0.00 37.02 1.98
4520 4888 9.672673 TTTTAGCTTCAGTTTATGCTCTAGATT 57.327 29.630 0.00 0.00 37.02 2.40
4521 4889 9.672673 TTTAGCTTCAGTTTATGCTCTAGATTT 57.327 29.630 0.00 0.00 37.02 2.17
4522 4890 7.551035 AGCTTCAGTTTATGCTCTAGATTTG 57.449 36.000 0.00 0.00 0.00 2.32
4523 4891 7.334090 AGCTTCAGTTTATGCTCTAGATTTGA 58.666 34.615 0.00 0.00 0.00 2.69
4524 4892 7.279758 AGCTTCAGTTTATGCTCTAGATTTGAC 59.720 37.037 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.030849 CGCTCTTATATTATCGAAGGGAGTG 58.969 44.000 0.00 0.00 0.00 3.51
2 3 5.711036 ACGCTCTTATATTATCGAAGGGAGT 59.289 40.000 0.00 0.00 30.00 3.85
4 5 6.585695 AACGCTCTTATATTATCGAAGGGA 57.414 37.500 0.00 0.00 0.00 4.20
5 6 7.653767 AAAACGCTCTTATATTATCGAAGGG 57.346 36.000 0.00 0.00 0.00 3.95
8 9 9.089601 TGTCAAAAACGCTCTTATATTATCGAA 57.910 29.630 0.00 0.00 0.00 3.71
9 10 8.537223 GTGTCAAAAACGCTCTTATATTATCGA 58.463 33.333 0.00 0.00 35.42 3.59
11 12 8.325997 ACGTGTCAAAAACGCTCTTATATTATC 58.674 33.333 0.00 0.00 44.80 1.75
12 13 8.114290 CACGTGTCAAAAACGCTCTTATATTAT 58.886 33.333 7.58 0.00 44.80 1.28
13 14 7.116662 ACACGTGTCAAAAACGCTCTTATATTA 59.883 33.333 17.22 0.00 44.80 0.98
14 15 6.073440 ACACGTGTCAAAAACGCTCTTATATT 60.073 34.615 17.22 0.00 44.80 1.28
15 16 5.407387 ACACGTGTCAAAAACGCTCTTATAT 59.593 36.000 17.22 0.00 44.80 0.86
16 17 4.746115 ACACGTGTCAAAAACGCTCTTATA 59.254 37.500 17.22 0.00 44.80 0.98
17 18 3.558418 ACACGTGTCAAAAACGCTCTTAT 59.442 39.130 17.22 0.00 44.80 1.73
18 19 2.931325 ACACGTGTCAAAAACGCTCTTA 59.069 40.909 17.22 0.00 44.80 2.10
19 20 1.735571 ACACGTGTCAAAAACGCTCTT 59.264 42.857 17.22 0.00 44.80 2.85
20 21 1.326548 GACACGTGTCAAAAACGCTCT 59.673 47.619 37.16 4.94 44.80 4.09
21 22 1.726659 GACACGTGTCAAAAACGCTC 58.273 50.000 37.16 11.94 44.80 5.03
22 23 3.889780 GACACGTGTCAAAAACGCT 57.110 47.368 37.16 5.72 44.80 5.07
44 45 8.865090 CCCTCTGTCTCATAATATAAGAGTGTT 58.135 37.037 0.00 0.00 0.00 3.32
45 46 8.228206 TCCCTCTGTCTCATAATATAAGAGTGT 58.772 37.037 0.00 0.00 0.00 3.55
46 47 8.642935 TCCCTCTGTCTCATAATATAAGAGTG 57.357 38.462 0.00 0.00 0.00 3.51
47 48 8.452868 ACTCCCTCTGTCTCATAATATAAGAGT 58.547 37.037 0.00 0.00 0.00 3.24
48 49 8.877864 ACTCCCTCTGTCTCATAATATAAGAG 57.122 38.462 0.00 0.00 0.00 2.85
49 50 9.742144 GTACTCCCTCTGTCTCATAATATAAGA 57.258 37.037 0.00 0.00 0.00 2.10
50 51 9.521841 TGTACTCCCTCTGTCTCATAATATAAG 57.478 37.037 0.00 0.00 0.00 1.73
56 57 9.877222 TTTATATGTACTCCCTCTGTCTCATAA 57.123 33.333 0.00 0.00 0.00 1.90
57 58 9.521841 CTTTATATGTACTCCCTCTGTCTCATA 57.478 37.037 0.00 0.00 0.00 2.15
58 59 7.039363 GCTTTATATGTACTCCCTCTGTCTCAT 60.039 40.741 0.00 0.00 0.00 2.90
59 60 6.265649 GCTTTATATGTACTCCCTCTGTCTCA 59.734 42.308 0.00 0.00 0.00 3.27
60 61 6.265649 TGCTTTATATGTACTCCCTCTGTCTC 59.734 42.308 0.00 0.00 0.00 3.36
61 62 6.041069 GTGCTTTATATGTACTCCCTCTGTCT 59.959 42.308 0.00 0.00 0.00 3.41
62 63 6.217294 GTGCTTTATATGTACTCCCTCTGTC 58.783 44.000 0.00 0.00 0.00 3.51
63 64 5.221263 CGTGCTTTATATGTACTCCCTCTGT 60.221 44.000 0.00 0.00 0.00 3.41
64 65 5.223382 CGTGCTTTATATGTACTCCCTCTG 58.777 45.833 0.00 0.00 0.00 3.35
65 66 4.281182 CCGTGCTTTATATGTACTCCCTCT 59.719 45.833 0.00 0.00 0.00 3.69
66 67 4.280174 TCCGTGCTTTATATGTACTCCCTC 59.720 45.833 0.00 0.00 0.00 4.30
67 68 4.220724 TCCGTGCTTTATATGTACTCCCT 58.779 43.478 0.00 0.00 0.00 4.20
68 69 4.595762 TCCGTGCTTTATATGTACTCCC 57.404 45.455 0.00 0.00 0.00 4.30
69 70 6.691818 CGATATCCGTGCTTTATATGTACTCC 59.308 42.308 0.00 0.00 0.00 3.85
70 71 6.196724 GCGATATCCGTGCTTTATATGTACTC 59.803 42.308 0.00 0.00 41.15 2.59
71 72 6.034591 GCGATATCCGTGCTTTATATGTACT 58.965 40.000 0.00 0.00 41.15 2.73
72 73 5.231568 GGCGATATCCGTGCTTTATATGTAC 59.768 44.000 0.00 0.00 41.15 2.90
73 74 5.345702 GGCGATATCCGTGCTTTATATGTA 58.654 41.667 0.00 0.00 41.15 2.29
74 75 4.181578 GGCGATATCCGTGCTTTATATGT 58.818 43.478 0.00 0.00 41.15 2.29
75 76 3.555956 GGGCGATATCCGTGCTTTATATG 59.444 47.826 0.00 0.00 41.15 1.78
76 77 3.196901 TGGGCGATATCCGTGCTTTATAT 59.803 43.478 0.00 0.00 41.15 0.86
77 78 2.563620 TGGGCGATATCCGTGCTTTATA 59.436 45.455 0.00 0.00 41.15 0.98
78 79 1.346395 TGGGCGATATCCGTGCTTTAT 59.654 47.619 0.00 0.00 41.15 1.40
79 80 0.753867 TGGGCGATATCCGTGCTTTA 59.246 50.000 0.00 0.00 41.15 1.85
80 81 0.108585 ATGGGCGATATCCGTGCTTT 59.891 50.000 0.00 0.00 41.15 3.51
81 82 0.973632 TATGGGCGATATCCGTGCTT 59.026 50.000 0.00 0.00 41.15 3.91
82 83 0.973632 TTATGGGCGATATCCGTGCT 59.026 50.000 0.00 0.00 41.15 4.40
83 84 1.803334 TTTATGGGCGATATCCGTGC 58.197 50.000 0.00 0.00 41.15 5.34
84 85 2.677836 CCATTTATGGGCGATATCCGTG 59.322 50.000 0.56 0.00 44.31 4.94
85 86 2.985896 CCATTTATGGGCGATATCCGT 58.014 47.619 0.56 0.00 44.31 4.69
95 96 5.796846 CGGTCTACGCTTTCCATTTATGGG 61.797 50.000 8.82 0.00 41.51 4.00
96 97 3.247648 CGGTCTACGCTTTCCATTTATGG 59.752 47.826 2.19 2.19 42.15 2.74
97 98 4.452890 CGGTCTACGCTTTCCATTTATG 57.547 45.455 0.00 0.00 34.82 1.90
111 112 1.542544 GTACGATGCACACGGTCTAC 58.457 55.000 17.12 8.62 34.93 2.59
112 113 0.097499 CGTACGATGCACACGGTCTA 59.903 55.000 10.44 1.25 34.93 2.59
113 114 1.154093 CGTACGATGCACACGGTCT 60.154 57.895 10.44 2.08 34.93 3.85
114 115 3.370131 CGTACGATGCACACGGTC 58.630 61.111 10.44 9.68 34.93 4.79
126 127 4.908736 TCTAGGACGTTTTTATCCGTACG 58.091 43.478 8.69 8.69 42.68 3.67
130 131 6.897259 TCAATTCTAGGACGTTTTTATCCG 57.103 37.500 0.00 0.00 0.00 4.18
168 169 3.816523 TGTGATGCATCGCAATGACATAT 59.183 39.130 34.56 0.00 43.60 1.78
169 170 3.204526 TGTGATGCATCGCAATGACATA 58.795 40.909 34.56 13.57 43.60 2.29
171 172 1.451067 TGTGATGCATCGCAATGACA 58.549 45.000 34.56 22.34 43.60 3.58
211 212 2.965147 CAAATGGTTCCTGGTTCTGGTT 59.035 45.455 0.00 0.00 0.00 3.67
242 243 3.371097 CTACACCGCGACATGGCCT 62.371 63.158 8.23 0.00 0.00 5.19
258 260 3.430565 CTCGGATGCACGCTGCCTA 62.431 63.158 7.38 0.00 44.23 3.93
325 327 5.783360 TGAGTGGGTCAATAAGAGGACTAAA 59.217 40.000 0.00 0.00 34.49 1.85
328 330 3.791320 TGAGTGGGTCAATAAGAGGACT 58.209 45.455 0.00 0.00 34.49 3.85
366 368 2.821969 GCATTTGTGTTGGAGGTCAGAT 59.178 45.455 0.00 0.00 0.00 2.90
370 372 1.327303 TGGCATTTGTGTTGGAGGTC 58.673 50.000 0.00 0.00 0.00 3.85
378 380 2.093973 TCAAACGGTTTGGCATTTGTGT 60.094 40.909 27.86 0.00 40.98 3.72
381 383 1.520590 CGTCAAACGGTTTGGCATTTG 59.479 47.619 30.56 15.30 45.23 2.32
395 397 4.329528 ACAGCGTGTACTAAAAACGTCAAA 59.670 37.500 4.84 0.00 39.45 2.69
440 442 8.498358 ACTGTTTTACCTTTTAATACACGTAGC 58.502 33.333 0.00 0.00 0.00 3.58
445 447 9.524106 AAGCAACTGTTTTACCTTTTAATACAC 57.476 29.630 0.00 0.00 0.00 2.90
456 458 2.766970 TCGCAAGCAACTGTTTTACC 57.233 45.000 0.00 0.00 37.18 2.85
459 461 5.181690 TCTTTATCGCAAGCAACTGTTTT 57.818 34.783 0.00 0.00 37.18 2.43
469 471 7.725610 AATTGTTCGATTTCTTTATCGCAAG 57.274 32.000 0.00 0.00 45.28 4.01
471 473 6.526325 CCAAATTGTTCGATTTCTTTATCGCA 59.474 34.615 0.00 0.00 45.28 5.10
472 474 6.526674 ACCAAATTGTTCGATTTCTTTATCGC 59.473 34.615 0.00 0.00 45.28 4.58
473 475 7.537306 ACACCAAATTGTTCGATTTCTTTATCG 59.463 33.333 0.00 0.00 46.63 2.92
474 476 8.742554 ACACCAAATTGTTCGATTTCTTTATC 57.257 30.769 0.00 0.00 0.00 1.75
475 477 9.541143 AAACACCAAATTGTTCGATTTCTTTAT 57.459 25.926 0.00 0.00 38.82 1.40
476 478 8.934507 AAACACCAAATTGTTCGATTTCTTTA 57.065 26.923 0.00 0.00 38.82 1.85
477 479 7.841915 AAACACCAAATTGTTCGATTTCTTT 57.158 28.000 0.00 0.00 38.82 2.52
480 482 7.460296 ACAAAAACACCAAATTGTTCGATTTC 58.540 30.769 0.00 0.00 38.82 2.17
486 488 5.182190 ACCCAACAAAAACACCAAATTGTTC 59.818 36.000 0.00 0.00 42.36 3.18
516 519 7.496529 TCTGGAAACTCAAACTTATGTTGAG 57.503 36.000 11.60 11.60 37.36 3.02
521 524 5.770162 ACCCTTCTGGAAACTCAAACTTATG 59.230 40.000 0.00 0.00 38.00 1.90
523 526 5.104277 TGACCCTTCTGGAAACTCAAACTTA 60.104 40.000 0.00 0.00 38.00 2.24
589 608 1.614241 GGACAGGTACACCATCGCCT 61.614 60.000 0.38 0.00 38.89 5.52
590 609 1.153429 GGACAGGTACACCATCGCC 60.153 63.158 0.38 0.00 38.89 5.54
591 610 1.153429 GGGACAGGTACACCATCGC 60.153 63.158 0.38 2.96 38.89 4.58
592 611 1.261938 TGGGGACAGGTACACCATCG 61.262 60.000 0.38 0.00 35.76 3.84
593 612 2.691663 TGGGGACAGGTACACCATC 58.308 57.895 0.38 0.00 35.76 3.51
652 672 3.961588 GGGGGTGGTATGGAGAGTA 57.038 57.895 0.00 0.00 0.00 2.59
691 711 2.081425 GAGGAGACTGCGATGCGGAT 62.081 60.000 4.35 0.00 44.43 4.18
692 712 2.755876 AGGAGACTGCGATGCGGA 60.756 61.111 4.35 0.00 41.13 5.54
881 937 0.037882 CTCAGCTCAGTCTTTGCGGA 60.038 55.000 0.00 0.00 0.00 5.54
891 947 2.806929 CTCTCGGCCTCAGCTCAG 59.193 66.667 0.00 0.00 39.73 3.35
910 966 3.839642 GATCCTCTGGCTCGCTCGC 62.840 68.421 0.00 0.00 0.00 5.03
911 967 2.334653 GATCCTCTGGCTCGCTCG 59.665 66.667 0.00 0.00 0.00 5.03
917 973 4.390341 GGAGTGGATCCTCTGGCT 57.610 61.111 20.85 7.02 45.64 4.75
925 981 1.017387 GTTCGCCAATGGAGTGGATC 58.983 55.000 2.05 0.00 41.65 3.36
926 982 0.744414 CGTTCGCCAATGGAGTGGAT 60.744 55.000 2.05 0.00 41.65 3.41
927 983 1.375396 CGTTCGCCAATGGAGTGGA 60.375 57.895 2.05 0.00 41.65 4.02
928 984 1.361668 CTCGTTCGCCAATGGAGTGG 61.362 60.000 2.05 0.00 42.05 4.00
929 985 1.970917 GCTCGTTCGCCAATGGAGTG 61.971 60.000 2.05 0.00 0.00 3.51
930 986 1.741770 GCTCGTTCGCCAATGGAGT 60.742 57.895 2.05 0.00 0.00 3.85
931 987 3.093278 GCTCGTTCGCCAATGGAG 58.907 61.111 2.05 0.00 0.00 3.86
939 995 1.807573 CTTCCTCTGGCTCGTTCGC 60.808 63.158 0.00 0.00 0.00 4.70
940 996 0.243907 TTCTTCCTCTGGCTCGTTCG 59.756 55.000 0.00 0.00 0.00 3.95
941 997 2.003196 CTTCTTCCTCTGGCTCGTTC 57.997 55.000 0.00 0.00 0.00 3.95
942 998 0.036858 GCTTCTTCCTCTGGCTCGTT 60.037 55.000 0.00 0.00 0.00 3.85
943 999 1.188219 TGCTTCTTCCTCTGGCTCGT 61.188 55.000 0.00 0.00 0.00 4.18
944 1000 0.459934 CTGCTTCTTCCTCTGGCTCG 60.460 60.000 0.00 0.00 0.00 5.03
945 1001 0.901124 TCTGCTTCTTCCTCTGGCTC 59.099 55.000 0.00 0.00 0.00 4.70
946 1002 0.903942 CTCTGCTTCTTCCTCTGGCT 59.096 55.000 0.00 0.00 0.00 4.75
947 1003 0.744057 GCTCTGCTTCTTCCTCTGGC 60.744 60.000 0.00 0.00 0.00 4.85
948 1004 0.903942 AGCTCTGCTTCTTCCTCTGG 59.096 55.000 0.00 0.00 33.89 3.86
949 1005 2.101249 CCTAGCTCTGCTTCTTCCTCTG 59.899 54.545 0.00 0.00 40.44 3.35
989 1045 1.153086 GTGATCATCTTGCCCGCCT 60.153 57.895 0.00 0.00 0.00 5.52
991 1047 2.537560 CCGTGATCATCTTGCCCGC 61.538 63.158 0.00 0.00 0.00 6.13
1155 1211 1.944177 TGAAGTGGAAGGAGAGGAGG 58.056 55.000 0.00 0.00 0.00 4.30
1569 1631 2.439701 TCGGCCTCGGTCTCGATT 60.440 61.111 0.00 0.00 45.04 3.34
1578 1643 3.068691 TCCTTGACCTCGGCCTCG 61.069 66.667 0.00 0.00 37.82 4.63
1959 2039 2.597510 GTGGCCGGCTTCTTTGGT 60.598 61.111 28.56 0.00 0.00 3.67
1962 2042 2.112297 TTCGTGGCCGGCTTCTTT 59.888 55.556 28.56 0.00 33.95 2.52
1975 2055 2.030562 CTTGGCCTGTCCGTTCGT 59.969 61.111 3.32 0.00 37.80 3.85
2120 2234 2.108157 TGCGTGGTGACTGGTGAC 59.892 61.111 0.00 0.00 0.00 3.67
2140 2254 3.701241 GAAACCAACAACAAATCGAGCA 58.299 40.909 0.00 0.00 0.00 4.26
2154 2268 4.456566 GGACAAATTAGCCTACGAAACCAA 59.543 41.667 0.00 0.00 0.00 3.67
2164 2278 1.904287 TTGTGCGGACAAATTAGCCT 58.096 45.000 20.84 0.00 39.20 4.58
2218 2335 1.306482 CTCCCTCTCCTTGGCTCCA 60.306 63.158 0.00 0.00 0.00 3.86
2236 2353 0.456312 CTCGCTCCACGTTGTAGTCC 60.456 60.000 0.00 0.00 44.19 3.85
2578 2719 0.819259 GTGAAGTTCCACCTGCAGCA 60.819 55.000 8.66 0.00 0.00 4.41
2693 2838 4.016444 GGAAGGAAGCATGGAATACAACA 58.984 43.478 0.00 0.00 0.00 3.33
2782 2939 2.430921 GACCTGCACGTCCACGAG 60.431 66.667 6.03 0.00 43.02 4.18
2783 2940 2.910479 AGACCTGCACGTCCACGA 60.910 61.111 11.61 0.00 43.02 4.35
2784 2941 2.734723 CAGACCTGCACGTCCACG 60.735 66.667 11.61 0.00 46.33 4.94
2786 2943 1.069090 GAACAGACCTGCACGTCCA 59.931 57.895 11.61 0.00 32.91 4.02
2787 2944 0.320771 ATGAACAGACCTGCACGTCC 60.321 55.000 11.61 0.00 32.91 4.79
2987 3145 0.629058 TATCCCCTGCTTTTCACCCC 59.371 55.000 0.00 0.00 0.00 4.95
2988 3146 2.496070 GTTTATCCCCTGCTTTTCACCC 59.504 50.000 0.00 0.00 0.00 4.61
2990 3148 4.864704 TTGTTTATCCCCTGCTTTTCAC 57.135 40.909 0.00 0.00 0.00 3.18
3056 3224 4.704103 AGCAGGAGCACGAGGGGA 62.704 66.667 0.00 0.00 45.49 4.81
3101 3269 0.702316 GTTAGAGGAAGGGGGCCAAA 59.298 55.000 4.39 0.00 0.00 3.28
3102 3270 1.212250 GGTTAGAGGAAGGGGGCCAA 61.212 60.000 4.39 0.00 0.00 4.52
3103 3271 1.618447 GGTTAGAGGAAGGGGGCCA 60.618 63.158 4.39 0.00 0.00 5.36
3202 3468 2.927856 AGGATGTCGGGGTGCACA 60.928 61.111 20.43 0.00 0.00 4.57
3226 3492 2.159282 CGAGAATGGTGGTACTTACGCT 60.159 50.000 0.00 0.00 0.00 5.07
3274 3568 0.598065 AAGCGGAAAATGGTGAGCAC 59.402 50.000 0.00 0.00 0.00 4.40
3380 3711 3.804325 CGAAGCGATGGATCTTTACATGT 59.196 43.478 2.69 2.69 0.00 3.21
3496 3834 2.370189 GCTAGGAGCACCACCATTATCT 59.630 50.000 2.07 0.00 41.89 1.98
3505 3843 1.133450 CCTACCTAGCTAGGAGCACCA 60.133 57.143 40.40 18.76 46.63 4.17
3612 3958 2.125673 ATTCCGCGACCTGAACCG 60.126 61.111 8.23 0.00 0.00 4.44
3689 4040 5.468072 GGTCAGTTACTATCAGAATGGCATG 59.532 44.000 0.00 0.00 36.16 4.06
3695 4046 8.543774 ACAATCAAGGTCAGTTACTATCAGAAT 58.456 33.333 0.00 0.00 0.00 2.40
3732 4083 1.818674 GGTCAGGAACGCCATGAAATT 59.181 47.619 0.00 0.00 36.29 1.82
3827 4187 5.163571 TGCACACTTGTAAGAAATGAAAGCA 60.164 36.000 0.00 0.00 0.00 3.91
3891 4252 1.708341 AAAAAGCTGCCCATCACTGT 58.292 45.000 0.00 0.00 0.00 3.55
3914 4275 5.188327 TCACTGTTGTGTTGTGTCAAAAA 57.812 34.783 0.00 0.00 44.14 1.94
3915 4276 4.837896 TCACTGTTGTGTTGTGTCAAAA 57.162 36.364 0.00 0.00 44.14 2.44
3916 4277 4.380339 CCATCACTGTTGTGTTGTGTCAAA 60.380 41.667 0.00 0.00 44.14 2.69
3917 4278 3.128415 CCATCACTGTTGTGTTGTGTCAA 59.872 43.478 0.00 0.00 44.14 3.18
3918 4279 2.682352 CCATCACTGTTGTGTTGTGTCA 59.318 45.455 0.00 0.00 44.14 3.58
3919 4280 2.033299 CCCATCACTGTTGTGTTGTGTC 59.967 50.000 0.00 0.00 44.14 3.67
3920 4281 2.023673 CCCATCACTGTTGTGTTGTGT 58.976 47.619 0.00 0.00 44.14 3.72
3921 4282 1.269206 GCCCATCACTGTTGTGTTGTG 60.269 52.381 0.00 0.00 44.14 3.33
3922 4283 1.032014 GCCCATCACTGTTGTGTTGT 58.968 50.000 0.00 0.00 44.14 3.32
3923 4284 1.001048 CTGCCCATCACTGTTGTGTTG 60.001 52.381 0.00 0.00 44.14 3.33
3924 4285 1.321474 CTGCCCATCACTGTTGTGTT 58.679 50.000 0.00 0.00 44.14 3.32
3925 4286 1.174712 GCTGCCCATCACTGTTGTGT 61.175 55.000 0.00 0.00 44.14 3.72
3926 4287 0.892358 AGCTGCCCATCACTGTTGTG 60.892 55.000 0.00 0.00 45.07 3.33
3927 4288 0.892358 CAGCTGCCCATCACTGTTGT 60.892 55.000 0.00 0.00 0.00 3.32
3928 4289 0.892358 ACAGCTGCCCATCACTGTTG 60.892 55.000 15.27 0.00 40.35 3.33
3947 4308 5.709631 TCAACTTAATCAAGCACAGCCATAA 59.290 36.000 0.00 0.00 34.94 1.90
3948 4309 5.252547 TCAACTTAATCAAGCACAGCCATA 58.747 37.500 0.00 0.00 34.94 2.74
3969 4330 1.071987 CTGTGGCCTCAACAGCTCA 59.928 57.895 9.14 0.00 0.00 4.26
3970 4331 0.250467 TTCTGTGGCCTCAACAGCTC 60.250 55.000 15.27 0.00 0.00 4.09
3971 4332 0.183492 TTTCTGTGGCCTCAACAGCT 59.817 50.000 15.27 0.00 0.00 4.24
3972 4333 0.312102 GTTTCTGTGGCCTCAACAGC 59.688 55.000 15.27 1.21 0.00 4.40
3973 4334 0.588252 CGTTTCTGTGGCCTCAACAG 59.412 55.000 14.17 14.17 0.00 3.16
3974 4335 1.444119 GCGTTTCTGTGGCCTCAACA 61.444 55.000 9.14 1.22 0.00 3.33
3975 4336 1.282875 GCGTTTCTGTGGCCTCAAC 59.717 57.895 9.14 3.60 0.00 3.18
3976 4337 0.537143 ATGCGTTTCTGTGGCCTCAA 60.537 50.000 9.14 0.00 0.00 3.02
4024 4385 2.150390 CACGTCATGTCAAACCATGGA 58.850 47.619 21.47 0.00 42.02 3.41
4027 4388 0.881118 GGCACGTCATGTCAAACCAT 59.119 50.000 0.00 0.00 31.05 3.55
4074 4442 1.274167 TGCAACTTAAGTCGTCCGGAT 59.726 47.619 7.81 0.00 0.00 4.18
4142 4510 4.794648 TCGCCCCAAATCCAGCCG 62.795 66.667 0.00 0.00 0.00 5.52
4143 4511 1.738346 GATTCGCCCCAAATCCAGCC 61.738 60.000 0.00 0.00 0.00 4.85
4144 4512 1.735973 GATTCGCCCCAAATCCAGC 59.264 57.895 0.00 0.00 0.00 4.85
4147 4515 2.193536 CCGGATTCGCCCCAAATCC 61.194 63.158 0.00 5.05 45.81 3.01
4148 4516 1.444917 GACCGGATTCGCCCCAAATC 61.445 60.000 9.46 0.00 34.56 2.17
4149 4517 1.453197 GACCGGATTCGCCCCAAAT 60.453 57.895 9.46 0.00 34.56 2.32
4150 4518 2.045731 GACCGGATTCGCCCCAAA 60.046 61.111 9.46 0.00 34.56 3.28
4151 4519 4.460683 CGACCGGATTCGCCCCAA 62.461 66.667 9.46 0.00 34.56 4.12
4154 4522 4.886121 GACCGACCGGATTCGCCC 62.886 72.222 16.07 0.00 37.70 6.13
4155 4523 3.366739 AAGACCGACCGGATTCGCC 62.367 63.158 16.07 2.65 37.70 5.54
4156 4524 2.165301 CAAGACCGACCGGATTCGC 61.165 63.158 16.07 0.00 37.70 4.70
4157 4525 0.525668 CTCAAGACCGACCGGATTCG 60.526 60.000 16.07 8.23 38.96 3.34
4158 4526 0.806492 GCTCAAGACCGACCGGATTC 60.806 60.000 16.07 3.20 38.96 2.52
4159 4527 1.218316 GCTCAAGACCGACCGGATT 59.782 57.895 16.07 6.65 38.96 3.01
4160 4528 1.668101 GAGCTCAAGACCGACCGGAT 61.668 60.000 16.07 0.20 38.96 4.18
4161 4529 2.282958 AGCTCAAGACCGACCGGA 60.283 61.111 16.07 0.00 38.96 5.14
4162 4530 1.949847 ATGAGCTCAAGACCGACCGG 61.950 60.000 22.50 6.94 42.03 5.28
4163 4531 0.526524 GATGAGCTCAAGACCGACCG 60.527 60.000 22.50 0.00 0.00 4.79
4164 4532 0.179097 GGATGAGCTCAAGACCGACC 60.179 60.000 22.50 11.35 0.00 4.79
4165 4533 0.526524 CGGATGAGCTCAAGACCGAC 60.527 60.000 35.14 16.95 40.58 4.79
4166 4534 1.667154 CCGGATGAGCTCAAGACCGA 61.667 60.000 37.58 14.14 40.58 4.69
4167 4535 1.227089 CCGGATGAGCTCAAGACCG 60.227 63.158 33.29 33.29 39.17 4.79
4168 4536 1.522580 GCCGGATGAGCTCAAGACC 60.523 63.158 22.50 21.36 0.00 3.85
4169 4537 0.809241 CAGCCGGATGAGCTCAAGAC 60.809 60.000 22.50 14.63 38.95 3.01
4170 4538 1.260538 ACAGCCGGATGAGCTCAAGA 61.261 55.000 29.47 0.00 38.95 3.02
4171 4539 1.088340 CACAGCCGGATGAGCTCAAG 61.088 60.000 29.47 14.73 38.95 3.02
4172 4540 1.078918 CACAGCCGGATGAGCTCAA 60.079 57.895 29.47 4.23 38.95 3.02
4173 4541 2.580815 CACAGCCGGATGAGCTCA 59.419 61.111 29.47 20.79 38.95 4.26
4174 4542 2.202987 CCACAGCCGGATGAGCTC 60.203 66.667 29.47 6.82 38.95 4.09
4175 4543 3.790437 CCCACAGCCGGATGAGCT 61.790 66.667 29.47 0.00 42.70 4.09
4176 4544 3.746949 CTCCCACAGCCGGATGAGC 62.747 68.421 29.47 0.00 0.00 4.26
4177 4545 2.060383 TCTCCCACAGCCGGATGAG 61.060 63.158 29.47 19.66 0.00 2.90
4178 4546 2.038813 TCTCCCACAGCCGGATGA 59.961 61.111 29.47 1.89 0.00 2.92
4179 4547 2.187946 GTCTCCCACAGCCGGATG 59.812 66.667 20.26 20.26 0.00 3.51
4180 4548 3.083997 GGTCTCCCACAGCCGGAT 61.084 66.667 5.05 0.00 0.00 4.18
4207 4575 2.824041 GTGCCCGGCCAGTACATG 60.824 66.667 7.03 0.00 0.00 3.21
4208 4576 4.109675 GGTGCCCGGCCAGTACAT 62.110 66.667 7.03 0.00 0.00 2.29
4210 4578 4.468689 GAGGTGCCCGGCCAGTAC 62.469 72.222 7.03 2.54 0.00 2.73
4248 4616 4.124351 CTGCATGTGGCCTTGCGG 62.124 66.667 16.70 16.70 42.91 5.69
4249 4617 4.124351 CCTGCATGTGGCCTTGCG 62.124 66.667 17.24 12.86 42.91 4.85
4250 4618 4.446413 GCCTGCATGTGGCCTTGC 62.446 66.667 17.42 16.07 44.32 4.01
4257 4625 2.675423 AGCCACTGCCTGCATGTG 60.675 61.111 12.03 12.03 38.69 3.21
4258 4626 2.360852 GAGCCACTGCCTGCATGT 60.361 61.111 0.00 0.00 38.69 3.21
4259 4627 3.138798 GGAGCCACTGCCTGCATG 61.139 66.667 0.00 0.00 38.69 4.06
4260 4628 3.336568 AGGAGCCACTGCCTGCAT 61.337 61.111 0.00 0.00 38.69 3.96
4261 4629 4.025858 GAGGAGCCACTGCCTGCA 62.026 66.667 0.00 0.00 38.69 4.41
4262 4630 4.792804 GGAGGAGCCACTGCCTGC 62.793 72.222 0.00 0.00 38.69 4.85
4263 4631 3.007920 AGGAGGAGCCACTGCCTG 61.008 66.667 0.00 0.00 40.02 4.85
4264 4632 1.879927 TAGAGGAGGAGCCACTGCCT 61.880 60.000 0.00 0.00 38.15 4.75
4265 4633 1.381872 TAGAGGAGGAGCCACTGCC 60.382 63.158 0.00 0.00 38.15 4.85
4266 4634 2.026945 GCTAGAGGAGGAGCCACTGC 62.027 65.000 0.00 0.00 38.15 4.40
4267 4635 2.123409 GCTAGAGGAGGAGCCACTG 58.877 63.158 0.00 0.00 38.15 3.66
4268 4636 4.697102 GCTAGAGGAGGAGCCACT 57.303 61.111 0.00 0.00 40.89 4.00
4272 4640 1.737201 GAACGGCTAGAGGAGGAGC 59.263 63.158 0.00 0.00 38.00 4.70
4273 4641 1.448922 CCGAACGGCTAGAGGAGGAG 61.449 65.000 0.00 0.00 0.00 3.69
4274 4642 1.453379 CCGAACGGCTAGAGGAGGA 60.453 63.158 0.00 0.00 0.00 3.71
4275 4643 0.824182 ATCCGAACGGCTAGAGGAGG 60.824 60.000 8.48 0.00 34.14 4.30
4276 4644 0.594110 GATCCGAACGGCTAGAGGAG 59.406 60.000 8.48 0.00 34.14 3.69
4277 4645 0.183014 AGATCCGAACGGCTAGAGGA 59.817 55.000 8.48 0.00 35.24 3.71
4278 4646 0.312416 CAGATCCGAACGGCTAGAGG 59.688 60.000 8.48 0.00 34.68 3.69
4279 4647 0.318275 GCAGATCCGAACGGCTAGAG 60.318 60.000 8.48 0.00 34.68 2.43
4280 4648 1.035385 TGCAGATCCGAACGGCTAGA 61.035 55.000 8.48 0.00 34.68 2.43
4281 4649 0.032678 ATGCAGATCCGAACGGCTAG 59.967 55.000 8.48 0.18 34.68 3.42
4282 4650 0.032130 GATGCAGATCCGAACGGCTA 59.968 55.000 8.48 0.00 34.68 3.93
4283 4651 1.227380 GATGCAGATCCGAACGGCT 60.227 57.895 8.48 0.00 34.68 5.52
4284 4652 2.589492 CGATGCAGATCCGAACGGC 61.589 63.158 8.48 0.00 34.68 5.68
4285 4653 1.209275 GACGATGCAGATCCGAACGG 61.209 60.000 6.94 6.94 0.00 4.44
4286 4654 1.532343 CGACGATGCAGATCCGAACG 61.532 60.000 7.42 8.28 0.00 3.95
4287 4655 1.209275 CCGACGATGCAGATCCGAAC 61.209 60.000 0.00 1.92 0.00 3.95
4288 4656 1.065764 CCGACGATGCAGATCCGAA 59.934 57.895 0.00 0.00 0.00 4.30
4289 4657 2.119029 ACCGACGATGCAGATCCGA 61.119 57.895 0.00 0.00 0.00 4.55
4290 4658 1.946156 CACCGACGATGCAGATCCG 60.946 63.158 0.00 0.00 0.00 4.18
4291 4659 1.592669 CCACCGACGATGCAGATCC 60.593 63.158 0.00 0.00 0.00 3.36
4292 4660 0.872021 GACCACCGACGATGCAGATC 60.872 60.000 0.00 0.00 0.00 2.75
4293 4661 1.141881 GACCACCGACGATGCAGAT 59.858 57.895 0.00 0.00 0.00 2.90
4294 4662 2.571757 GACCACCGACGATGCAGA 59.428 61.111 0.00 0.00 0.00 4.26
4295 4663 2.509336 GGACCACCGACGATGCAG 60.509 66.667 0.00 0.00 0.00 4.41
4306 4674 1.812686 TATATCTGCCGGCGGACCAC 61.813 60.000 39.38 12.81 33.73 4.16
4307 4675 1.532078 TATATCTGCCGGCGGACCA 60.532 57.895 39.38 29.07 33.73 4.02
4308 4676 1.080025 GTATATCTGCCGGCGGACC 60.080 63.158 39.38 22.73 33.73 4.46
4309 4677 1.443872 CGTATATCTGCCGGCGGAC 60.444 63.158 39.38 25.47 33.73 4.79
4310 4678 1.174078 TTCGTATATCTGCCGGCGGA 61.174 55.000 38.68 38.68 35.60 5.54
4311 4679 0.108804 ATTCGTATATCTGCCGGCGG 60.109 55.000 30.18 30.18 0.00 6.13
4312 4680 0.992072 CATTCGTATATCTGCCGGCG 59.008 55.000 23.90 16.91 0.00 6.46
4313 4681 1.359848 CCATTCGTATATCTGCCGGC 58.640 55.000 22.73 22.73 0.00 6.13
4314 4682 1.337728 TGCCATTCGTATATCTGCCGG 60.338 52.381 0.00 0.00 0.00 6.13
4315 4683 1.995484 CTGCCATTCGTATATCTGCCG 59.005 52.381 0.00 0.00 0.00 5.69
4316 4684 2.996621 GACTGCCATTCGTATATCTGCC 59.003 50.000 0.00 0.00 0.00 4.85
4317 4685 2.663602 CGACTGCCATTCGTATATCTGC 59.336 50.000 0.00 0.00 0.00 4.26
4318 4686 3.245797 CCGACTGCCATTCGTATATCTG 58.754 50.000 3.72 0.00 34.56 2.90
4319 4687 2.352814 GCCGACTGCCATTCGTATATCT 60.353 50.000 3.72 0.00 34.56 1.98
4320 4688 1.993370 GCCGACTGCCATTCGTATATC 59.007 52.381 3.72 0.00 34.56 1.63
4321 4689 2.080286 GCCGACTGCCATTCGTATAT 57.920 50.000 3.72 0.00 34.56 0.86
4322 4690 3.580904 GCCGACTGCCATTCGTATA 57.419 52.632 3.72 0.00 34.56 1.47
4323 4691 4.438346 GCCGACTGCCATTCGTAT 57.562 55.556 3.72 0.00 34.56 3.06
4344 4712 3.273080 CTTTGGGCAAGCACCGAGC 62.273 63.158 0.00 0.00 46.19 5.03
4345 4713 2.956987 CTTTGGGCAAGCACCGAG 59.043 61.111 0.00 0.00 0.00 4.63
4352 4720 2.680913 CCGACGAGCTTTGGGCAAG 61.681 63.158 0.00 0.00 44.79 4.01
4353 4721 2.668212 CCGACGAGCTTTGGGCAA 60.668 61.111 0.00 0.00 44.79 4.52
4354 4722 3.936203 ACCGACGAGCTTTGGGCA 61.936 61.111 0.00 0.00 44.79 5.36
4355 4723 3.423154 CACCGACGAGCTTTGGGC 61.423 66.667 0.00 0.00 42.19 5.36
4356 4724 3.423154 GCACCGACGAGCTTTGGG 61.423 66.667 0.00 0.00 0.00 4.12
4357 4725 2.664851 TGCACCGACGAGCTTTGG 60.665 61.111 12.30 0.00 0.00 3.28
4358 4726 2.551270 GTGCACCGACGAGCTTTG 59.449 61.111 5.22 0.00 0.00 2.77
4359 4727 2.665185 GGTGCACCGACGAGCTTT 60.665 61.111 22.49 0.00 0.00 3.51
4360 4728 2.731691 AATGGTGCACCGACGAGCTT 62.732 55.000 30.07 11.77 39.43 3.74
4361 4729 3.240134 AATGGTGCACCGACGAGCT 62.240 57.895 30.07 6.83 39.43 4.09
4362 4730 2.742372 AATGGTGCACCGACGAGC 60.742 61.111 30.07 5.71 39.43 5.03
4363 4731 3.168271 CAATGGTGCACCGACGAG 58.832 61.111 30.07 14.42 39.43 4.18
4373 4741 1.745087 ACTTAATGAGCGGCAATGGTG 59.255 47.619 1.45 0.00 0.00 4.17
4374 4742 1.745087 CACTTAATGAGCGGCAATGGT 59.255 47.619 1.45 0.00 0.00 3.55
4375 4743 1.534595 GCACTTAATGAGCGGCAATGG 60.535 52.381 1.45 0.00 0.00 3.16
4376 4744 1.831343 GCACTTAATGAGCGGCAATG 58.169 50.000 1.45 0.00 0.00 2.82
4383 4751 1.394917 CAGTGGTCGCACTTAATGAGC 59.605 52.381 0.00 0.00 32.26 4.26
4384 4752 1.394917 GCAGTGGTCGCACTTAATGAG 59.605 52.381 0.00 0.00 32.26 2.90
4385 4753 1.438651 GCAGTGGTCGCACTTAATGA 58.561 50.000 0.00 0.00 32.26 2.57
4386 4754 0.447801 GGCAGTGGTCGCACTTAATG 59.552 55.000 0.00 0.00 32.26 1.90
4387 4755 0.676782 GGGCAGTGGTCGCACTTAAT 60.677 55.000 0.00 0.00 32.26 1.40
4388 4756 1.302192 GGGCAGTGGTCGCACTTAA 60.302 57.895 0.00 0.00 32.26 1.85
4389 4757 2.046009 TTGGGCAGTGGTCGCACTTA 62.046 55.000 0.00 0.00 32.55 2.24
4390 4758 2.902423 TTTGGGCAGTGGTCGCACTT 62.902 55.000 0.00 0.00 32.55 3.16
4391 4759 3.414136 TTTGGGCAGTGGTCGCACT 62.414 57.895 0.00 0.00 32.55 4.40
4392 4760 2.904866 TTTGGGCAGTGGTCGCAC 60.905 61.111 0.00 0.00 0.00 5.34
4393 4761 2.594303 CTTTGGGCAGTGGTCGCA 60.594 61.111 0.00 0.00 0.00 5.10
4394 4762 1.452145 TTTCTTTGGGCAGTGGTCGC 61.452 55.000 0.00 0.00 0.00 5.19
4395 4763 0.593128 CTTTCTTTGGGCAGTGGTCG 59.407 55.000 0.00 0.00 0.00 4.79
4396 4764 1.609072 GACTTTCTTTGGGCAGTGGTC 59.391 52.381 0.00 0.00 0.00 4.02
4397 4765 1.064017 TGACTTTCTTTGGGCAGTGGT 60.064 47.619 0.00 0.00 0.00 4.16
4398 4766 1.691196 TGACTTTCTTTGGGCAGTGG 58.309 50.000 0.00 0.00 0.00 4.00
4399 4767 2.608752 GCATGACTTTCTTTGGGCAGTG 60.609 50.000 0.00 0.00 0.00 3.66
4400 4768 1.615392 GCATGACTTTCTTTGGGCAGT 59.385 47.619 0.00 0.00 0.00 4.40
4401 4769 1.401931 CGCATGACTTTCTTTGGGCAG 60.402 52.381 0.00 0.00 0.00 4.85
4402 4770 0.597568 CGCATGACTTTCTTTGGGCA 59.402 50.000 0.00 0.00 0.00 5.36
4403 4771 0.733909 GCGCATGACTTTCTTTGGGC 60.734 55.000 0.30 0.00 0.00 5.36
4404 4772 0.109132 GGCGCATGACTTTCTTTGGG 60.109 55.000 10.83 0.00 0.00 4.12
4405 4773 0.454957 CGGCGCATGACTTTCTTTGG 60.455 55.000 10.83 0.00 0.00 3.28
4406 4774 1.067199 GCGGCGCATGACTTTCTTTG 61.067 55.000 29.21 0.00 0.00 2.77
4407 4775 1.210155 GCGGCGCATGACTTTCTTT 59.790 52.632 29.21 0.00 0.00 2.52
4408 4776 2.870372 GCGGCGCATGACTTTCTT 59.130 55.556 29.21 0.00 0.00 2.52
4409 4777 3.490759 CGCGGCGCATGACTTTCT 61.491 61.111 32.61 0.00 0.00 2.52
4410 4778 3.788766 ACGCGGCGCATGACTTTC 61.789 61.111 32.61 0.00 0.00 2.62
4411 4779 4.088762 CACGCGGCGCATGACTTT 62.089 61.111 32.61 3.00 0.00 2.66
4415 4783 4.123009 TAGACACGCGGCGCATGA 62.123 61.111 35.26 9.69 0.00 3.07
4416 4784 3.913573 GTAGACACGCGGCGCATG 61.914 66.667 32.61 30.02 0.00 4.06
4417 4785 3.925362 TTGTAGACACGCGGCGCAT 62.925 57.895 32.61 15.66 0.00 4.73
4418 4786 4.649310 TTGTAGACACGCGGCGCA 62.649 61.111 32.61 8.16 0.00 6.09
4419 4787 4.130281 GTTGTAGACACGCGGCGC 62.130 66.667 24.21 24.21 0.00 6.53
4420 4788 3.823421 CGTTGTAGACACGCGGCG 61.823 66.667 22.36 22.36 0.00 6.46
4421 4789 4.130281 GCGTTGTAGACACGCGGC 62.130 66.667 12.47 0.00 42.90 6.53
4425 4793 1.372004 TTCCGGCGTTGTAGACACG 60.372 57.895 6.01 0.00 0.00 4.49
4426 4794 0.598158 TGTTCCGGCGTTGTAGACAC 60.598 55.000 6.01 0.00 0.00 3.67
4427 4795 0.319083 ATGTTCCGGCGTTGTAGACA 59.681 50.000 6.01 1.51 0.00 3.41
4428 4796 0.997196 GATGTTCCGGCGTTGTAGAC 59.003 55.000 6.01 0.00 0.00 2.59
4429 4797 0.108520 GGATGTTCCGGCGTTGTAGA 60.109 55.000 6.01 0.00 0.00 2.59
4430 4798 1.087771 GGGATGTTCCGGCGTTGTAG 61.088 60.000 6.01 0.00 37.43 2.74
4431 4799 1.078988 GGGATGTTCCGGCGTTGTA 60.079 57.895 6.01 0.00 37.43 2.41
4432 4800 2.359478 GGGATGTTCCGGCGTTGT 60.359 61.111 6.01 0.00 37.43 3.32
4433 4801 3.496131 CGGGATGTTCCGGCGTTG 61.496 66.667 6.01 0.00 45.78 4.10
4448 4816 2.162208 CACTTGATGAACACCCATTCGG 59.838 50.000 0.00 0.00 37.81 4.30
4449 4817 2.813754 ACACTTGATGAACACCCATTCG 59.186 45.455 0.00 0.00 0.00 3.34
4450 4818 4.853924 AACACTTGATGAACACCCATTC 57.146 40.909 0.00 0.00 0.00 2.67
4451 4819 6.723298 TTAAACACTTGATGAACACCCATT 57.277 33.333 0.00 0.00 0.00 3.16
4452 4820 6.723298 TTTAAACACTTGATGAACACCCAT 57.277 33.333 0.00 0.00 0.00 4.00
4453 4821 6.322456 TCATTTAAACACTTGATGAACACCCA 59.678 34.615 0.00 0.00 0.00 4.51
4454 4822 6.744112 TCATTTAAACACTTGATGAACACCC 58.256 36.000 0.00 0.00 0.00 4.61
4455 4823 7.329226 CCATCATTTAAACACTTGATGAACACC 59.671 37.037 22.48 0.00 45.25 4.16
4456 4824 7.329226 CCCATCATTTAAACACTTGATGAACAC 59.671 37.037 22.48 0.00 45.25 3.32
4457 4825 7.377398 CCCATCATTTAAACACTTGATGAACA 58.623 34.615 22.48 0.00 45.25 3.18
4458 4826 6.813152 CCCCATCATTTAAACACTTGATGAAC 59.187 38.462 22.48 0.00 45.25 3.18
4459 4827 6.496565 ACCCCATCATTTAAACACTTGATGAA 59.503 34.615 22.48 0.00 45.25 2.57
4460 4828 6.015918 ACCCCATCATTTAAACACTTGATGA 58.984 36.000 22.48 8.83 45.25 2.92
4461 4829 6.284891 ACCCCATCATTTAAACACTTGATG 57.715 37.500 17.16 17.16 43.17 3.07
4462 4830 7.619302 ACATACCCCATCATTTAAACACTTGAT 59.381 33.333 0.00 0.00 0.00 2.57
4463 4831 6.951198 ACATACCCCATCATTTAAACACTTGA 59.049 34.615 0.00 0.00 0.00 3.02
4464 4832 7.035004 CACATACCCCATCATTTAAACACTTG 58.965 38.462 0.00 0.00 0.00 3.16
4465 4833 6.350949 GCACATACCCCATCATTTAAACACTT 60.351 38.462 0.00 0.00 0.00 3.16
4466 4834 5.127031 GCACATACCCCATCATTTAAACACT 59.873 40.000 0.00 0.00 0.00 3.55
4467 4835 5.127031 AGCACATACCCCATCATTTAAACAC 59.873 40.000 0.00 0.00 0.00 3.32
4468 4836 5.268387 AGCACATACCCCATCATTTAAACA 58.732 37.500 0.00 0.00 0.00 2.83
4469 4837 5.852282 AGCACATACCCCATCATTTAAAC 57.148 39.130 0.00 0.00 0.00 2.01
4470 4838 6.865834 AAAGCACATACCCCATCATTTAAA 57.134 33.333 0.00 0.00 0.00 1.52
4471 4839 6.865834 AAAAGCACATACCCCATCATTTAA 57.134 33.333 0.00 0.00 0.00 1.52
4472 4840 6.865834 AAAAAGCACATACCCCATCATTTA 57.134 33.333 0.00 0.00 0.00 1.40
4473 4841 5.760484 AAAAAGCACATACCCCATCATTT 57.240 34.783 0.00 0.00 0.00 2.32
4493 4861 9.672673 ATCTAGAGCATAAACTGAAGCTAAAAA 57.327 29.630 0.00 0.00 37.48 1.94
4494 4862 9.672673 AATCTAGAGCATAAACTGAAGCTAAAA 57.327 29.630 0.00 0.00 37.48 1.52
4495 4863 9.672673 AAATCTAGAGCATAAACTGAAGCTAAA 57.327 29.630 0.00 0.00 37.48 1.85
4496 4864 9.102757 CAAATCTAGAGCATAAACTGAAGCTAA 57.897 33.333 0.00 0.00 37.48 3.09
4497 4865 8.478066 TCAAATCTAGAGCATAAACTGAAGCTA 58.522 33.333 0.00 0.00 37.48 3.32
4498 4866 7.279758 GTCAAATCTAGAGCATAAACTGAAGCT 59.720 37.037 0.00 0.00 40.60 3.74
4499 4867 7.405769 GTCAAATCTAGAGCATAAACTGAAGC 58.594 38.462 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.