Multiple sequence alignment - TraesCS6B01G335200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G335200 chr6B 100.000 4023 0 0 978 5000 590444854 590448876 0.000000e+00 7430.0
1 TraesCS6B01G335200 chr6B 100.000 404 0 0 1 404 590443877 590444280 0.000000e+00 747.0
2 TraesCS6B01G335200 chr6B 97.674 172 3 1 4537 4707 545253910 545254081 1.360000e-75 294.0
3 TraesCS6B01G335200 chr6D 96.526 3569 101 12 987 4545 394555663 394559218 0.000000e+00 5882.0
4 TraesCS6B01G335200 chr6D 87.541 305 27 7 4702 5000 394559212 394559511 4.790000e-90 342.0
5 TraesCS6B01G335200 chr6D 86.256 211 5 9 208 404 394555291 394555491 1.820000e-49 207.0
6 TraesCS6B01G335200 chr6D 90.756 119 4 6 288 404 394548168 394548281 8.670000e-33 152.0
7 TraesCS6B01G335200 chr6A 95.240 2647 99 19 1908 4545 540602588 540605216 0.000000e+00 4165.0
8 TraesCS6B01G335200 chr6A 92.626 895 59 3 987 1874 540601539 540602433 0.000000e+00 1280.0
9 TraesCS6B01G335200 chrUn 95.210 167 8 0 4545 4711 361712986 361712820 1.070000e-66 265.0
10 TraesCS6B01G335200 chr4A 94.706 170 9 0 4542 4711 619565479 619565648 1.070000e-66 265.0
11 TraesCS6B01G335200 chr4A 87.209 172 22 0 4543 4714 572702928 572702757 3.950000e-46 196.0
12 TraesCS6B01G335200 chr4B 94.643 168 9 0 4542 4709 179776701 179776868 1.380000e-65 261.0
13 TraesCS6B01G335200 chr3D 94.152 171 10 0 4541 4711 213682819 213682989 1.380000e-65 261.0
14 TraesCS6B01G335200 chr3B 92.169 166 11 2 4545 4710 206341869 206341706 3.010000e-57 233.0
15 TraesCS6B01G335200 chr3B 83.544 79 9 4 4875 4949 150098557 150098479 2.500000e-08 71.3
16 TraesCS6B01G335200 chr3B 81.013 79 11 2 4875 4949 328545486 328545564 5.410000e-05 60.2
17 TraesCS6B01G335200 chr1B 90.751 173 15 1 4545 4716 242744170 242744342 3.890000e-56 230.0
18 TraesCS6B01G335200 chr1B 85.567 97 8 4 4903 4999 486565085 486564995 4.120000e-16 97.1
19 TraesCS6B01G335200 chr4D 87.574 169 21 0 4543 4711 30278251 30278419 3.950000e-46 196.0
20 TraesCS6B01G335200 chr2D 82.222 180 27 5 1023 1198 611163931 611163753 3.120000e-32 150.0
21 TraesCS6B01G335200 chr2B 83.750 160 25 1 1023 1181 746041283 746041124 3.120000e-32 150.0
22 TraesCS6B01G335200 chr2A 84.667 150 23 0 1023 1172 743392016 743391867 3.120000e-32 150.0
23 TraesCS6B01G335200 chr7B 83.544 79 9 2 4875 4949 7207314 7207392 2.500000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G335200 chr6B 590443877 590448876 4999 False 4088.500000 7430 100.000000 1 5000 2 chr6B.!!$F2 4999
1 TraesCS6B01G335200 chr6D 394555291 394559511 4220 False 2143.666667 5882 90.107667 208 5000 3 chr6D.!!$F2 4792
2 TraesCS6B01G335200 chr6A 540601539 540605216 3677 False 2722.500000 4165 93.933000 987 4545 2 chr6A.!!$F1 3558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
189 190 0.519519 CGCCAATTTTACGTCCTGCA 59.480 50.000 0.00 0.0 0.00 4.41 F
1300 1319 0.171231 GAGAAAATGCGGTTCCAGGC 59.829 55.000 0.00 0.0 0.00 4.85 F
1477 1498 0.472471 TTTTGTGGCCGAAGACCTCT 59.528 50.000 0.00 0.0 0.00 3.69 F
2370 2516 1.951209 TGGATCTTGGTCCTGCTGTA 58.049 50.000 1.33 0.0 39.12 2.74 F
3533 3679 1.737793 CAACACTTCCGATGGGCTTAC 59.262 52.381 0.00 0.0 0.00 2.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1315 1334 0.179121 ATCACGCGCCAGTTCGAATA 60.179 50.000 5.73 0.0 0.00 1.75 R
3285 3431 0.250467 GCCAAGAGCCAGTTGTGAGA 60.250 55.000 0.00 0.0 34.35 3.27 R
3480 3626 3.685139 ACACACATCTGGTAAGTGGAG 57.315 47.619 0.00 0.0 37.58 3.86 R
3774 3920 1.271434 GGTTTCCTGTCCTCCTCAACC 60.271 57.143 0.00 0.0 0.00 3.77 R
4641 4795 0.029300 TACGCGTGTATCTTACCGGC 59.971 55.000 24.59 0.0 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.902705 ACTCCTTAAGAACGTGCACA 57.097 45.000 18.64 0.00 0.00 4.57
20 21 2.480845 ACTCCTTAAGAACGTGCACAC 58.519 47.619 18.64 7.59 0.00 3.82
21 22 2.159014 ACTCCTTAAGAACGTGCACACA 60.159 45.455 18.64 0.00 0.00 3.72
22 23 3.067106 CTCCTTAAGAACGTGCACACAT 58.933 45.455 18.64 1.11 0.00 3.21
23 24 4.242475 CTCCTTAAGAACGTGCACACATA 58.758 43.478 18.64 2.33 0.00 2.29
24 25 3.991773 TCCTTAAGAACGTGCACACATAC 59.008 43.478 18.64 3.15 0.00 2.39
25 26 3.994392 CCTTAAGAACGTGCACACATACT 59.006 43.478 18.64 5.49 0.00 2.12
26 27 5.047872 TCCTTAAGAACGTGCACACATACTA 60.048 40.000 18.64 0.00 0.00 1.82
27 28 5.810587 CCTTAAGAACGTGCACACATACTAT 59.189 40.000 18.64 0.00 0.00 2.12
28 29 6.312918 CCTTAAGAACGTGCACACATACTATT 59.687 38.462 18.64 2.85 0.00 1.73
29 30 7.148474 CCTTAAGAACGTGCACACATACTATTT 60.148 37.037 18.64 1.13 0.00 1.40
30 31 8.760103 TTAAGAACGTGCACACATACTATTTA 57.240 30.769 18.64 0.23 0.00 1.40
31 32 7.843490 AAGAACGTGCACACATACTATTTAT 57.157 32.000 18.64 0.00 0.00 1.40
32 33 7.464830 AGAACGTGCACACATACTATTTATC 57.535 36.000 18.64 0.00 0.00 1.75
33 34 6.479001 AGAACGTGCACACATACTATTTATCC 59.521 38.462 18.64 0.00 0.00 2.59
34 35 5.054477 ACGTGCACACATACTATTTATCCC 58.946 41.667 18.64 0.00 0.00 3.85
35 36 5.163343 ACGTGCACACATACTATTTATCCCT 60.163 40.000 18.64 0.00 0.00 4.20
36 37 6.041182 ACGTGCACACATACTATTTATCCCTA 59.959 38.462 18.64 0.00 0.00 3.53
37 38 6.365247 CGTGCACACATACTATTTATCCCTAC 59.635 42.308 18.64 0.00 0.00 3.18
38 39 6.365247 GTGCACACATACTATTTATCCCTACG 59.635 42.308 13.17 0.00 0.00 3.51
39 40 6.265876 TGCACACATACTATTTATCCCTACGA 59.734 38.462 0.00 0.00 0.00 3.43
40 41 6.807230 GCACACATACTATTTATCCCTACGAG 59.193 42.308 0.00 0.00 0.00 4.18
41 42 7.523380 GCACACATACTATTTATCCCTACGAGT 60.523 40.741 0.00 0.00 0.00 4.18
42 43 9.006839 CACACATACTATTTATCCCTACGAGTA 57.993 37.037 0.00 0.00 0.00 2.59
43 44 9.750783 ACACATACTATTTATCCCTACGAGTAT 57.249 33.333 0.00 0.00 0.00 2.12
52 53 9.597681 ATTTATCCCTACGAGTATTTAGGAAGA 57.402 33.333 0.00 0.00 37.64 2.87
53 54 9.597681 TTTATCCCTACGAGTATTTAGGAAGAT 57.402 33.333 0.00 0.00 37.64 2.40
54 55 9.597681 TTATCCCTACGAGTATTTAGGAAGATT 57.402 33.333 0.00 0.00 37.64 2.40
55 56 7.286215 TCCCTACGAGTATTTAGGAAGATTG 57.714 40.000 0.00 0.00 37.64 2.67
56 57 7.064866 TCCCTACGAGTATTTAGGAAGATTGA 58.935 38.462 0.00 0.00 37.64 2.57
57 58 7.230913 TCCCTACGAGTATTTAGGAAGATTGAG 59.769 40.741 0.00 0.00 37.64 3.02
58 59 7.014422 CCCTACGAGTATTTAGGAAGATTGAGT 59.986 40.741 0.00 0.00 37.64 3.41
59 60 8.077386 CCTACGAGTATTTAGGAAGATTGAGTC 58.923 40.741 0.00 0.00 37.64 3.36
60 61 6.807789 ACGAGTATTTAGGAAGATTGAGTCC 58.192 40.000 0.00 0.00 0.00 3.85
61 62 5.915758 CGAGTATTTAGGAAGATTGAGTCCG 59.084 44.000 0.00 0.00 39.06 4.79
62 63 5.602628 AGTATTTAGGAAGATTGAGTCCGC 58.397 41.667 0.00 0.00 39.06 5.54
63 64 3.973206 TTTAGGAAGATTGAGTCCGCA 57.027 42.857 0.00 0.00 39.06 5.69
64 65 2.961526 TAGGAAGATTGAGTCCGCAC 57.038 50.000 0.00 0.00 39.06 5.34
65 66 0.976641 AGGAAGATTGAGTCCGCACA 59.023 50.000 0.00 0.00 39.06 4.57
66 67 1.556911 AGGAAGATTGAGTCCGCACAT 59.443 47.619 0.00 0.00 39.06 3.21
67 68 2.026822 AGGAAGATTGAGTCCGCACATT 60.027 45.455 0.00 0.00 39.06 2.71
68 69 2.749621 GGAAGATTGAGTCCGCACATTT 59.250 45.455 0.00 0.00 0.00 2.32
69 70 3.191371 GGAAGATTGAGTCCGCACATTTT 59.809 43.478 0.00 0.00 0.00 1.82
70 71 4.394920 GGAAGATTGAGTCCGCACATTTTA 59.605 41.667 0.00 0.00 0.00 1.52
71 72 5.106317 GGAAGATTGAGTCCGCACATTTTAA 60.106 40.000 0.00 0.00 0.00 1.52
72 73 5.957842 AGATTGAGTCCGCACATTTTAAA 57.042 34.783 0.00 0.00 0.00 1.52
73 74 6.325919 AGATTGAGTCCGCACATTTTAAAA 57.674 33.333 2.51 2.51 0.00 1.52
74 75 6.924111 AGATTGAGTCCGCACATTTTAAAAT 58.076 32.000 7.64 7.64 0.00 1.82
75 76 7.378181 AGATTGAGTCCGCACATTTTAAAATT 58.622 30.769 10.77 0.97 0.00 1.82
76 77 6.761731 TTGAGTCCGCACATTTTAAAATTG 57.238 33.333 10.77 12.77 0.00 2.32
77 78 6.078202 TGAGTCCGCACATTTTAAAATTGA 57.922 33.333 10.77 1.26 0.00 2.57
78 79 6.686630 TGAGTCCGCACATTTTAAAATTGAT 58.313 32.000 10.77 0.00 0.00 2.57
79 80 6.585702 TGAGTCCGCACATTTTAAAATTGATG 59.414 34.615 10.77 10.51 0.00 3.07
80 81 6.686630 AGTCCGCACATTTTAAAATTGATGA 58.313 32.000 10.77 9.49 0.00 2.92
81 82 7.151308 AGTCCGCACATTTTAAAATTGATGAA 58.849 30.769 10.77 0.00 0.00 2.57
82 83 7.655328 AGTCCGCACATTTTAAAATTGATGAAA 59.345 29.630 10.77 0.00 0.00 2.69
83 84 8.442384 GTCCGCACATTTTAAAATTGATGAAAT 58.558 29.630 10.77 0.00 0.00 2.17
84 85 9.645059 TCCGCACATTTTAAAATTGATGAAATA 57.355 25.926 10.77 0.00 0.00 1.40
85 86 9.904647 CCGCACATTTTAAAATTGATGAAATAG 57.095 29.630 10.77 0.00 0.00 1.73
102 103 7.905604 TGAAATAGTCATAAACACACCAGAG 57.094 36.000 0.00 0.00 0.00 3.35
103 104 7.450074 TGAAATAGTCATAAACACACCAGAGT 58.550 34.615 0.00 0.00 0.00 3.24
104 105 7.936847 TGAAATAGTCATAAACACACCAGAGTT 59.063 33.333 0.00 0.00 0.00 3.01
105 106 7.672983 AATAGTCATAAACACACCAGAGTTG 57.327 36.000 0.00 0.00 0.00 3.16
106 107 5.290493 AGTCATAAACACACCAGAGTTGA 57.710 39.130 0.00 0.00 0.00 3.18
107 108 5.057149 AGTCATAAACACACCAGAGTTGAC 58.943 41.667 0.00 0.00 0.00 3.18
108 109 4.814234 GTCATAAACACACCAGAGTTGACA 59.186 41.667 0.00 0.00 0.00 3.58
109 110 5.295787 GTCATAAACACACCAGAGTTGACAA 59.704 40.000 0.00 0.00 0.00 3.18
110 111 5.883115 TCATAAACACACCAGAGTTGACAAA 59.117 36.000 0.00 0.00 0.00 2.83
111 112 4.434713 AAACACACCAGAGTTGACAAAC 57.565 40.909 0.00 0.00 36.47 2.93
112 113 3.066291 ACACACCAGAGTTGACAAACA 57.934 42.857 0.00 0.00 38.88 2.83
113 114 2.747446 ACACACCAGAGTTGACAAACAC 59.253 45.455 0.00 0.00 38.88 3.32
114 115 2.746904 CACACCAGAGTTGACAAACACA 59.253 45.455 0.00 0.00 38.88 3.72
115 116 3.378112 CACACCAGAGTTGACAAACACAT 59.622 43.478 0.00 0.00 38.88 3.21
116 117 3.627577 ACACCAGAGTTGACAAACACATC 59.372 43.478 0.00 0.00 38.88 3.06
117 118 2.872245 ACCAGAGTTGACAAACACATCG 59.128 45.455 0.00 0.00 38.88 3.84
118 119 2.872245 CCAGAGTTGACAAACACATCGT 59.128 45.455 0.00 0.00 38.88 3.73
119 120 4.055360 CCAGAGTTGACAAACACATCGTA 58.945 43.478 0.00 0.00 38.88 3.43
120 121 4.084537 CCAGAGTTGACAAACACATCGTAC 60.085 45.833 0.00 0.00 38.88 3.67
121 122 4.056050 AGAGTTGACAAACACATCGTACC 58.944 43.478 0.00 0.00 38.88 3.34
122 123 3.799366 AGTTGACAAACACATCGTACCA 58.201 40.909 0.00 0.00 38.88 3.25
123 124 4.385825 AGTTGACAAACACATCGTACCAT 58.614 39.130 0.00 0.00 38.88 3.55
124 125 4.819630 AGTTGACAAACACATCGTACCATT 59.180 37.500 0.00 0.00 38.88 3.16
125 126 4.740741 TGACAAACACATCGTACCATTG 57.259 40.909 0.00 0.00 0.00 2.82
126 127 4.381411 TGACAAACACATCGTACCATTGA 58.619 39.130 0.00 0.00 0.00 2.57
127 128 4.816925 TGACAAACACATCGTACCATTGAA 59.183 37.500 0.00 0.00 0.00 2.69
128 129 5.297029 TGACAAACACATCGTACCATTGAAA 59.703 36.000 0.00 0.00 0.00 2.69
129 130 6.137794 ACAAACACATCGTACCATTGAAAA 57.862 33.333 0.00 0.00 0.00 2.29
130 131 6.565234 ACAAACACATCGTACCATTGAAAAA 58.435 32.000 0.00 0.00 0.00 1.94
152 153 8.962884 AAAAATAGCACCAGAAAACTTGAAAT 57.037 26.923 0.00 0.00 0.00 2.17
158 159 8.593492 AGCACCAGAAAACTTGAAATAAATTC 57.407 30.769 0.00 0.00 38.60 2.17
159 160 8.203485 AGCACCAGAAAACTTGAAATAAATTCA 58.797 29.630 0.00 0.00 46.22 2.57
185 186 2.251869 GGAACGCCAATTTTACGTCC 57.748 50.000 0.00 0.00 39.49 4.79
186 187 1.808343 GGAACGCCAATTTTACGTCCT 59.192 47.619 0.00 0.00 39.49 3.85
187 188 2.413634 GGAACGCCAATTTTACGTCCTG 60.414 50.000 0.00 0.00 39.49 3.86
188 189 0.519961 ACGCCAATTTTACGTCCTGC 59.480 50.000 0.00 0.00 34.35 4.85
189 190 0.519519 CGCCAATTTTACGTCCTGCA 59.480 50.000 0.00 0.00 0.00 4.41
190 191 1.465689 CGCCAATTTTACGTCCTGCAG 60.466 52.381 6.78 6.78 0.00 4.41
191 192 1.732405 GCCAATTTTACGTCCTGCAGC 60.732 52.381 8.66 0.00 0.00 5.25
192 193 1.812571 CCAATTTTACGTCCTGCAGCT 59.187 47.619 8.66 0.00 0.00 4.24
193 194 3.006940 CCAATTTTACGTCCTGCAGCTA 58.993 45.455 8.66 0.00 0.00 3.32
194 195 3.181510 CCAATTTTACGTCCTGCAGCTAC 60.182 47.826 8.66 7.79 0.00 3.58
195 196 2.823924 TTTTACGTCCTGCAGCTACA 57.176 45.000 8.66 0.00 0.00 2.74
196 197 2.823924 TTTACGTCCTGCAGCTACAA 57.176 45.000 8.66 0.00 0.00 2.41
197 198 2.823924 TTACGTCCTGCAGCTACAAA 57.176 45.000 8.66 3.49 0.00 2.83
198 199 3.328382 TTACGTCCTGCAGCTACAAAT 57.672 42.857 8.66 0.25 0.00 2.32
199 200 1.442769 ACGTCCTGCAGCTACAAATG 58.557 50.000 8.66 0.00 0.00 2.32
200 201 1.270839 ACGTCCTGCAGCTACAAATGT 60.271 47.619 8.66 0.00 0.00 2.71
201 202 1.394917 CGTCCTGCAGCTACAAATGTC 59.605 52.381 8.66 0.00 0.00 3.06
202 203 2.704572 GTCCTGCAGCTACAAATGTCT 58.295 47.619 8.66 0.00 0.00 3.41
203 204 3.077359 GTCCTGCAGCTACAAATGTCTT 58.923 45.455 8.66 0.00 0.00 3.01
204 205 3.076621 TCCTGCAGCTACAAATGTCTTG 58.923 45.455 8.66 0.00 0.00 3.02
205 206 2.415090 CCTGCAGCTACAAATGTCTTGC 60.415 50.000 8.66 8.85 32.78 4.01
206 207 2.486982 CTGCAGCTACAAATGTCTTGCT 59.513 45.455 0.00 9.33 33.11 3.91
217 218 5.244626 ACAAATGTCTTGCTAATTTCAGCCT 59.755 36.000 0.00 0.00 41.04 4.58
237 238 3.989817 CCTGAAACAAAATAAGCTGTGCC 59.010 43.478 0.00 0.00 0.00 5.01
280 295 1.066430 GCTGTCAGGTTCGGTGGATTA 60.066 52.381 1.14 0.00 0.00 1.75
291 306 5.065602 GGTTCGGTGGATTAGGTAAAATCAC 59.934 44.000 0.00 0.00 37.56 3.06
319 334 4.530710 TCATGGGTGCGTATAGGATTAC 57.469 45.455 0.00 0.00 0.00 1.89
350 365 6.915349 GTCTGTAATAACTGACTGACTGACT 58.085 40.000 7.92 0.00 45.88 3.41
351 366 6.804295 GTCTGTAATAACTGACTGACTGACTG 59.196 42.308 7.92 0.00 45.88 3.51
352 367 6.025749 TGTAATAACTGACTGACTGACTGG 57.974 41.667 0.00 0.00 0.00 4.00
402 417 2.361865 AAAACCCACCGTCCCTTCCC 62.362 60.000 0.00 0.00 0.00 3.97
403 418 3.805151 AACCCACCGTCCCTTCCCT 62.805 63.158 0.00 0.00 0.00 4.20
1215 1234 1.202746 CCCTAAGCCAGCCTGATCTTC 60.203 57.143 0.00 0.00 0.00 2.87
1248 1267 1.079405 CGCTCCCGCTTGGTTAGAA 60.079 57.895 0.00 0.00 34.77 2.10
1266 1285 6.151312 GGTTAGAAGATATGCATCCGTCTCTA 59.849 42.308 16.48 9.74 31.63 2.43
1300 1319 0.171231 GAGAAAATGCGGTTCCAGGC 59.829 55.000 0.00 0.00 0.00 4.85
1315 1334 2.046892 GGCCAGATCGTGTGTGCT 60.047 61.111 0.00 0.00 0.00 4.40
1350 1369 4.316446 CGCGTGATAGTATCGTGTGAAAAG 60.316 45.833 0.00 0.00 0.00 2.27
1410 1431 6.418057 AAGCGATCTATCAGAGAGGATTTT 57.582 37.500 0.00 0.00 37.70 1.82
1446 1467 2.498481 TGTCCTACCAATGTTACGGGAG 59.502 50.000 0.00 0.00 32.40 4.30
1447 1468 1.483415 TCCTACCAATGTTACGGGAGC 59.517 52.381 0.00 0.00 31.07 4.70
1477 1498 0.472471 TTTTGTGGCCGAAGACCTCT 59.528 50.000 0.00 0.00 0.00 3.69
1485 1506 2.494870 GGCCGAAGACCTCTGTTAACTA 59.505 50.000 7.22 0.00 0.00 2.24
1635 1657 7.433425 GTCTTTCATTTTTGTTCTTCACCAGAG 59.567 37.037 0.00 0.00 31.12 3.35
1725 1747 5.039333 GCAAGGCAGATTGAATCAACATAC 58.961 41.667 8.03 0.00 31.55 2.39
1746 1768 7.928706 ACATACTGTTAGAACTTGATAGATGCC 59.071 37.037 0.00 0.00 0.00 4.40
1797 1819 6.949352 ATCCCTTGTCATATGAATGTTGAC 57.051 37.500 7.07 0.00 40.10 3.18
1919 2065 2.017049 CACTAAGGGCTATTGTGGTGC 58.983 52.381 0.00 0.00 0.00 5.01
2067 2213 4.825546 ATCAAAATCAATAGAGGCTGCG 57.174 40.909 0.00 0.00 0.00 5.18
2370 2516 1.951209 TGGATCTTGGTCCTGCTGTA 58.049 50.000 1.33 0.00 39.12 2.74
2445 2591 4.290722 AGTGGGGAATCTCAAGAGTTCATT 59.709 41.667 11.62 0.53 0.00 2.57
2754 2900 2.062636 AGGGAAACAGGGAAGCACTTA 58.937 47.619 0.00 0.00 0.00 2.24
2766 2912 3.055819 GGAAGCACTTAGTGACAGATCCA 60.056 47.826 17.40 0.00 35.23 3.41
2961 3107 3.435327 TGTATGTTGATGACAAACTCCGC 59.565 43.478 0.00 0.00 42.62 5.54
2968 3114 5.287492 TTGATGACAAACTCCGCAAAGGAT 61.287 41.667 0.00 0.00 39.68 3.24
3150 3296 7.397476 AGGAGTATGATAGTCAAACTCAAGACA 59.603 37.037 9.33 0.00 37.23 3.41
3285 3431 3.873801 GCCCTACACTTGATGTCCACATT 60.874 47.826 0.00 0.00 42.09 2.71
3513 3659 5.446709 CAGATGTGTGTTCTGATGTTGTTC 58.553 41.667 0.00 0.00 42.63 3.18
3522 3668 5.163663 TGTTCTGATGTTGTTCAACACTTCC 60.164 40.000 18.52 10.06 35.22 3.46
3528 3674 1.890876 TGTTCAACACTTCCGATGGG 58.109 50.000 0.00 0.00 0.00 4.00
3533 3679 1.737793 CAACACTTCCGATGGGCTTAC 59.262 52.381 0.00 0.00 0.00 2.34
3558 3704 2.301577 AAGACATCGAGCAAGCTACC 57.698 50.000 0.00 0.00 0.00 3.18
3675 3821 8.433249 ACATATCAGAGGATGACACATTCTAT 57.567 34.615 2.70 0.00 41.91 1.98
3888 4034 2.289010 GGTTACCAAGCAATTGCAAGCT 60.289 45.455 30.89 13.12 45.16 3.74
3942 4088 4.837896 ACGCATAGAATCTCTGATCGAA 57.162 40.909 0.00 0.00 0.00 3.71
4123 4269 3.366679 GGCACTGTCCACTGAAATCAATG 60.367 47.826 0.00 0.00 0.00 2.82
4198 4344 5.974108 TCCCTGCAACAATTCTACTACTAC 58.026 41.667 0.00 0.00 0.00 2.73
4200 4346 5.338056 CCCTGCAACAATTCTACTACTACCA 60.338 44.000 0.00 0.00 0.00 3.25
4213 4359 9.953565 TTCTACTACTACCAAAGCATTTATGTT 57.046 29.630 0.00 0.00 35.03 2.71
4306 4457 5.869344 GCTTTTCTTGGATGTTGTATTTCCC 59.131 40.000 0.00 0.00 0.00 3.97
4364 4516 4.222336 TGTTCCCACAATCATTTCACCTT 58.778 39.130 0.00 0.00 0.00 3.50
4377 4529 6.656902 TCATTTCACCTTGAAGATCTGCTAT 58.343 36.000 1.43 0.00 37.70 2.97
4415 4567 4.172796 CAATTCTGCATGTAAATTGCGC 57.827 40.909 0.00 0.00 43.10 6.09
4418 4570 2.799871 TCTGCATGTAAATTGCGCATG 58.200 42.857 12.75 5.59 43.10 4.06
4419 4571 2.164017 TCTGCATGTAAATTGCGCATGT 59.836 40.909 12.75 0.00 43.10 3.21
4420 4572 2.924926 CTGCATGTAAATTGCGCATGTT 59.075 40.909 12.75 11.33 43.10 2.71
4421 4573 2.922387 TGCATGTAAATTGCGCATGTTC 59.078 40.909 12.75 1.82 43.10 3.18
4422 4574 2.282290 GCATGTAAATTGCGCATGTTCC 59.718 45.455 12.75 0.00 41.27 3.62
4423 4575 3.772932 CATGTAAATTGCGCATGTTCCT 58.227 40.909 12.75 0.00 36.28 3.36
4424 4576 3.214697 TGTAAATTGCGCATGTTCCTG 57.785 42.857 12.75 0.00 0.00 3.86
4425 4577 2.816672 TGTAAATTGCGCATGTTCCTGA 59.183 40.909 12.75 0.00 0.00 3.86
4426 4578 3.254411 TGTAAATTGCGCATGTTCCTGAA 59.746 39.130 12.75 0.00 0.00 3.02
4431 4583 2.431454 TGCGCATGTTCCTGAATGTAA 58.569 42.857 5.66 0.00 0.00 2.41
4446 4598 6.066054 TGAATGTAAATGCAACTTTGACGA 57.934 33.333 0.00 0.00 0.00 4.20
4456 4608 2.549754 CAACTTTGACGAGCCTGAATGT 59.450 45.455 0.00 0.00 0.00 2.71
4463 4615 3.126858 TGACGAGCCTGAATGTAAATTGC 59.873 43.478 0.00 0.00 0.00 3.56
4469 4621 4.640201 AGCCTGAATGTAAATTGCGTATGT 59.360 37.500 0.00 0.00 0.00 2.29
4477 4629 4.397730 TGTAAATTGCGTATGTTCCTGCAT 59.602 37.500 0.00 0.00 37.17 3.96
4488 4640 0.815213 TTCCTGCATGCTACGATGCC 60.815 55.000 20.33 0.00 46.98 4.40
4489 4641 1.227764 CCTGCATGCTACGATGCCT 60.228 57.895 20.33 0.00 46.98 4.75
4492 4644 0.752658 TGCATGCTACGATGCCTACT 59.247 50.000 20.33 0.00 46.98 2.57
4516 4670 2.587473 TGCGCACGCTTCTGTTCA 60.587 55.556 16.77 0.00 42.51 3.18
4517 4671 1.960763 TGCGCACGCTTCTGTTCAT 60.961 52.632 16.77 0.00 42.51 2.57
4533 4687 3.996363 TGTTCATCCTGTGTCAAGATTCG 59.004 43.478 0.00 0.00 0.00 3.34
4537 4691 1.967779 TCCTGTGTCAAGATTCGTCCA 59.032 47.619 0.00 0.00 0.00 4.02
4545 4699 3.614616 GTCAAGATTCGTCCACAGCTTAG 59.385 47.826 0.00 0.00 0.00 2.18
4546 4700 2.932614 CAAGATTCGTCCACAGCTTAGG 59.067 50.000 0.00 0.00 0.00 2.69
4547 4701 1.134670 AGATTCGTCCACAGCTTAGGC 60.135 52.381 0.00 0.00 39.06 3.93
4561 4715 4.257267 GCTTAGGCTTTGTTTGGAATGT 57.743 40.909 0.00 0.00 35.22 2.71
4562 4716 4.237724 GCTTAGGCTTTGTTTGGAATGTC 58.762 43.478 0.00 0.00 35.22 3.06
4563 4717 4.475944 CTTAGGCTTTGTTTGGAATGTCG 58.524 43.478 0.00 0.00 0.00 4.35
4564 4718 2.306847 AGGCTTTGTTTGGAATGTCGT 58.693 42.857 0.00 0.00 0.00 4.34
4565 4719 2.693074 AGGCTTTGTTTGGAATGTCGTT 59.307 40.909 0.00 0.00 0.00 3.85
4566 4720 3.132111 AGGCTTTGTTTGGAATGTCGTTT 59.868 39.130 0.00 0.00 0.00 3.60
4567 4721 3.489416 GGCTTTGTTTGGAATGTCGTTTC 59.511 43.478 0.00 0.00 0.00 2.78
4568 4722 4.109050 GCTTTGTTTGGAATGTCGTTTCA 58.891 39.130 0.00 0.00 0.00 2.69
4569 4723 4.744631 GCTTTGTTTGGAATGTCGTTTCAT 59.255 37.500 0.00 0.00 0.00 2.57
4570 4724 5.107875 GCTTTGTTTGGAATGTCGTTTCATC 60.108 40.000 0.00 0.00 0.00 2.92
4571 4725 5.766150 TTGTTTGGAATGTCGTTTCATCT 57.234 34.783 0.00 0.00 0.00 2.90
4572 4726 5.356882 TGTTTGGAATGTCGTTTCATCTC 57.643 39.130 0.00 0.00 0.00 2.75
4573 4727 4.819088 TGTTTGGAATGTCGTTTCATCTCA 59.181 37.500 0.00 0.00 0.00 3.27
4574 4728 5.298026 TGTTTGGAATGTCGTTTCATCTCAA 59.702 36.000 0.00 0.00 0.00 3.02
4575 4729 6.183360 TGTTTGGAATGTCGTTTCATCTCAAA 60.183 34.615 0.00 0.00 32.75 2.69
4576 4730 6.573664 TTGGAATGTCGTTTCATCTCAAAT 57.426 33.333 0.00 0.00 0.00 2.32
4577 4731 7.680442 TTGGAATGTCGTTTCATCTCAAATA 57.320 32.000 0.00 0.00 0.00 1.40
4578 4732 7.072177 TGGAATGTCGTTTCATCTCAAATAC 57.928 36.000 0.00 0.00 0.00 1.89
4579 4733 6.652900 TGGAATGTCGTTTCATCTCAAATACA 59.347 34.615 0.00 0.00 0.00 2.29
4580 4734 6.961554 GGAATGTCGTTTCATCTCAAATACAC 59.038 38.462 0.00 0.00 0.00 2.90
4581 4735 5.856126 TGTCGTTTCATCTCAAATACACC 57.144 39.130 0.00 0.00 0.00 4.16
4582 4736 5.547465 TGTCGTTTCATCTCAAATACACCT 58.453 37.500 0.00 0.00 0.00 4.00
4583 4737 5.408299 TGTCGTTTCATCTCAAATACACCTG 59.592 40.000 0.00 0.00 0.00 4.00
4584 4738 5.408604 GTCGTTTCATCTCAAATACACCTGT 59.591 40.000 0.00 0.00 0.00 4.00
4585 4739 6.588756 GTCGTTTCATCTCAAATACACCTGTA 59.411 38.462 0.00 0.00 34.67 2.74
4586 4740 6.811665 TCGTTTCATCTCAAATACACCTGTAG 59.188 38.462 0.00 0.00 33.52 2.74
4587 4741 6.811665 CGTTTCATCTCAAATACACCTGTAGA 59.188 38.462 0.00 0.00 33.52 2.59
4588 4742 7.330946 CGTTTCATCTCAAATACACCTGTAGAA 59.669 37.037 0.00 0.00 33.52 2.10
4589 4743 8.999431 GTTTCATCTCAAATACACCTGTAGAAA 58.001 33.333 0.00 0.00 33.52 2.52
4590 4744 9.567776 TTTCATCTCAAATACACCTGTAGAAAA 57.432 29.630 0.00 0.00 33.52 2.29
4591 4745 8.777865 TCATCTCAAATACACCTGTAGAAAAG 57.222 34.615 0.00 0.00 33.52 2.27
4592 4746 8.593679 TCATCTCAAATACACCTGTAGAAAAGA 58.406 33.333 0.00 0.00 33.52 2.52
4593 4747 9.388506 CATCTCAAATACACCTGTAGAAAAGAT 57.611 33.333 0.00 0.00 33.52 2.40
4595 4749 9.871238 TCTCAAATACACCTGTAGAAAAGATAC 57.129 33.333 0.00 0.00 33.52 2.24
4596 4750 9.653287 CTCAAATACACCTGTAGAAAAGATACA 57.347 33.333 0.00 0.00 33.52 2.29
4597 4751 9.653287 TCAAATACACCTGTAGAAAAGATACAG 57.347 33.333 6.21 6.21 46.36 2.74
4605 4759 5.833082 TGTAGAAAAGATACAGATCTCCGC 58.167 41.667 0.00 0.00 41.87 5.54
4606 4760 4.329462 AGAAAAGATACAGATCTCCGCC 57.671 45.455 0.00 0.00 41.87 6.13
4607 4761 3.070302 AGAAAAGATACAGATCTCCGCCC 59.930 47.826 0.00 0.00 41.87 6.13
4608 4762 2.088104 AAGATACAGATCTCCGCCCA 57.912 50.000 0.00 0.00 41.87 5.36
4609 4763 2.317371 AGATACAGATCTCCGCCCAT 57.683 50.000 0.00 0.00 38.01 4.00
4610 4764 2.175202 AGATACAGATCTCCGCCCATC 58.825 52.381 0.00 0.00 38.01 3.51
4611 4765 0.891373 ATACAGATCTCCGCCCATCG 59.109 55.000 0.00 0.00 38.08 3.84
4612 4766 0.467474 TACAGATCTCCGCCCATCGT 60.467 55.000 0.00 0.00 36.19 3.73
4613 4767 1.330655 ACAGATCTCCGCCCATCGTT 61.331 55.000 0.00 0.00 36.19 3.85
4614 4768 0.179073 CAGATCTCCGCCCATCGTTT 60.179 55.000 0.00 0.00 36.19 3.60
4615 4769 0.541863 AGATCTCCGCCCATCGTTTT 59.458 50.000 0.00 0.00 36.19 2.43
4616 4770 0.657840 GATCTCCGCCCATCGTTTTG 59.342 55.000 0.00 0.00 36.19 2.44
4617 4771 0.251916 ATCTCCGCCCATCGTTTTGA 59.748 50.000 0.00 0.00 36.19 2.69
4618 4772 0.251916 TCTCCGCCCATCGTTTTGAT 59.748 50.000 0.00 0.00 38.01 2.57
4619 4773 1.094785 CTCCGCCCATCGTTTTGATT 58.905 50.000 0.00 0.00 34.13 2.57
4620 4774 1.064060 CTCCGCCCATCGTTTTGATTC 59.936 52.381 0.00 0.00 34.13 2.52
4621 4775 0.100503 CCGCCCATCGTTTTGATTCC 59.899 55.000 0.00 0.00 34.13 3.01
4622 4776 0.248054 CGCCCATCGTTTTGATTCCG 60.248 55.000 0.00 0.00 34.13 4.30
4623 4777 0.100503 GCCCATCGTTTTGATTCCGG 59.899 55.000 0.00 0.00 34.13 5.14
4624 4778 0.100503 CCCATCGTTTTGATTCCGGC 59.899 55.000 0.00 0.00 34.13 6.13
4625 4779 1.094785 CCATCGTTTTGATTCCGGCT 58.905 50.000 0.00 0.00 34.13 5.52
4626 4780 1.202177 CCATCGTTTTGATTCCGGCTG 60.202 52.381 0.00 0.00 34.13 4.85
4627 4781 1.737236 CATCGTTTTGATTCCGGCTGA 59.263 47.619 0.00 0.00 34.13 4.26
4628 4782 1.885560 TCGTTTTGATTCCGGCTGAA 58.114 45.000 0.00 0.00 37.38 3.02
4629 4783 2.222886 TCGTTTTGATTCCGGCTGAAA 58.777 42.857 0.00 0.00 36.33 2.69
4630 4784 2.619177 TCGTTTTGATTCCGGCTGAAAA 59.381 40.909 0.00 0.00 36.33 2.29
4631 4785 3.254657 TCGTTTTGATTCCGGCTGAAAAT 59.745 39.130 0.00 0.00 36.33 1.82
4632 4786 3.608073 CGTTTTGATTCCGGCTGAAAATC 59.392 43.478 0.00 0.54 36.33 2.17
4633 4787 4.615912 CGTTTTGATTCCGGCTGAAAATCT 60.616 41.667 16.69 0.00 36.33 2.40
4634 4788 5.391523 CGTTTTGATTCCGGCTGAAAATCTA 60.392 40.000 16.69 9.88 36.33 1.98
4635 4789 5.560966 TTTGATTCCGGCTGAAAATCTAC 57.439 39.130 16.69 0.00 36.33 2.59
4636 4790 4.487714 TGATTCCGGCTGAAAATCTACT 57.512 40.909 16.69 0.00 36.33 2.57
4637 4791 4.191544 TGATTCCGGCTGAAAATCTACTG 58.808 43.478 16.69 0.00 36.33 2.74
4638 4792 2.691409 TCCGGCTGAAAATCTACTGG 57.309 50.000 0.00 0.00 0.00 4.00
4639 4793 1.906574 TCCGGCTGAAAATCTACTGGT 59.093 47.619 0.00 0.00 0.00 4.00
4640 4794 2.009774 CCGGCTGAAAATCTACTGGTG 58.990 52.381 0.00 0.00 0.00 4.17
4641 4795 2.009774 CGGCTGAAAATCTACTGGTGG 58.990 52.381 0.00 0.00 0.00 4.61
4642 4796 1.745653 GGCTGAAAATCTACTGGTGGC 59.254 52.381 0.00 0.00 0.00 5.01
4643 4797 1.745653 GCTGAAAATCTACTGGTGGCC 59.254 52.381 0.00 0.00 0.00 5.36
4644 4798 2.009774 CTGAAAATCTACTGGTGGCCG 58.990 52.381 0.00 0.00 0.00 6.13
4645 4799 1.339631 TGAAAATCTACTGGTGGCCGG 60.340 52.381 0.00 0.00 35.68 6.13
4646 4800 0.696501 AAAATCTACTGGTGGCCGGT 59.303 50.000 1.90 4.92 46.08 5.28
4647 4801 1.575419 AAATCTACTGGTGGCCGGTA 58.425 50.000 1.90 6.67 41.98 4.02
4648 4802 1.575419 AATCTACTGGTGGCCGGTAA 58.425 50.000 1.90 0.00 43.78 2.85
4649 4803 1.120530 ATCTACTGGTGGCCGGTAAG 58.879 55.000 1.90 0.00 43.78 2.34
4650 4804 0.040058 TCTACTGGTGGCCGGTAAGA 59.960 55.000 1.90 5.61 43.78 2.10
4651 4805 1.120530 CTACTGGTGGCCGGTAAGAT 58.879 55.000 1.90 0.00 43.78 2.40
4652 4806 2.091720 TCTACTGGTGGCCGGTAAGATA 60.092 50.000 1.90 0.00 43.78 1.98
4653 4807 0.828677 ACTGGTGGCCGGTAAGATAC 59.171 55.000 1.90 0.00 41.98 2.24
4654 4808 0.828022 CTGGTGGCCGGTAAGATACA 59.172 55.000 1.90 0.00 0.00 2.29
4655 4809 0.538118 TGGTGGCCGGTAAGATACAC 59.462 55.000 1.90 1.44 0.00 2.90
4656 4810 0.529119 GGTGGCCGGTAAGATACACG 60.529 60.000 1.90 0.00 0.00 4.49
4657 4811 1.142314 TGGCCGGTAAGATACACGC 59.858 57.895 1.90 0.00 0.00 5.34
4658 4812 1.947642 GGCCGGTAAGATACACGCG 60.948 63.158 3.53 3.53 0.00 6.01
4659 4813 1.226773 GCCGGTAAGATACACGCGT 60.227 57.895 5.58 5.58 0.00 6.01
4660 4814 0.029300 GCCGGTAAGATACACGCGTA 59.971 55.000 13.44 0.00 0.00 4.42
4661 4815 1.533756 GCCGGTAAGATACACGCGTAA 60.534 52.381 13.44 3.02 0.00 3.18
4662 4816 2.796304 CCGGTAAGATACACGCGTAAA 58.204 47.619 13.44 2.56 0.00 2.01
4663 4817 2.531508 CCGGTAAGATACACGCGTAAAC 59.468 50.000 13.44 1.65 0.00 2.01
4664 4818 3.429085 CGGTAAGATACACGCGTAAACT 58.571 45.455 13.44 4.39 0.00 2.66
4665 4819 4.495679 CCGGTAAGATACACGCGTAAACTA 60.496 45.833 13.44 0.00 0.00 2.24
4666 4820 5.027737 CGGTAAGATACACGCGTAAACTAA 58.972 41.667 13.44 0.00 0.00 2.24
4667 4821 5.511377 CGGTAAGATACACGCGTAAACTAAA 59.489 40.000 13.44 0.00 0.00 1.85
4668 4822 6.197096 CGGTAAGATACACGCGTAAACTAAAT 59.803 38.462 13.44 0.00 0.00 1.40
4669 4823 7.375808 CGGTAAGATACACGCGTAAACTAAATA 59.624 37.037 13.44 0.00 0.00 1.40
4670 4824 8.472236 GGTAAGATACACGCGTAAACTAAATAC 58.528 37.037 13.44 8.87 0.00 1.89
4671 4825 6.722972 AGATACACGCGTAAACTAAATACG 57.277 37.500 13.44 0.00 46.64 3.06
4672 4826 6.258160 AGATACACGCGTAAACTAAATACGT 58.742 36.000 13.44 3.21 45.87 3.57
4673 4827 4.806056 ACACGCGTAAACTAAATACGTC 57.194 40.909 13.44 0.75 45.87 4.34
4674 4828 4.475944 ACACGCGTAAACTAAATACGTCT 58.524 39.130 13.44 0.00 45.87 4.18
4675 4829 4.321745 ACACGCGTAAACTAAATACGTCTG 59.678 41.667 13.44 0.00 45.87 3.51
4676 4830 4.321745 CACGCGTAAACTAAATACGTCTGT 59.678 41.667 13.44 2.60 45.87 3.41
4677 4831 5.507876 CACGCGTAAACTAAATACGTCTGTA 59.492 40.000 13.44 0.00 45.87 2.74
4678 4832 6.195244 CACGCGTAAACTAAATACGTCTGTAT 59.805 38.462 13.44 0.00 45.87 2.29
4690 4844 7.459394 AATACGTCTGTATTTGATTACACCG 57.541 36.000 0.00 0.00 46.61 4.94
4691 4845 3.615496 ACGTCTGTATTTGATTACACCGC 59.385 43.478 0.00 0.00 30.36 5.68
4692 4846 3.615056 CGTCTGTATTTGATTACACCGCA 59.385 43.478 0.00 0.00 0.00 5.69
4693 4847 4.270084 CGTCTGTATTTGATTACACCGCAT 59.730 41.667 0.00 0.00 0.00 4.73
4694 4848 5.556382 CGTCTGTATTTGATTACACCGCATC 60.556 44.000 0.00 0.00 0.00 3.91
4695 4849 4.814234 TCTGTATTTGATTACACCGCATCC 59.186 41.667 0.00 0.00 0.00 3.51
4696 4850 4.518249 TGTATTTGATTACACCGCATCCA 58.482 39.130 0.00 0.00 0.00 3.41
4697 4851 4.944317 TGTATTTGATTACACCGCATCCAA 59.056 37.500 0.00 0.00 0.00 3.53
4698 4852 4.637483 ATTTGATTACACCGCATCCAAG 57.363 40.909 0.00 0.00 0.00 3.61
4699 4853 1.378531 TGATTACACCGCATCCAAGC 58.621 50.000 0.00 0.00 0.00 4.01
4718 4872 1.630148 CGCAGCCTTAGTAGTGTCAC 58.370 55.000 0.00 0.00 0.00 3.67
4719 4873 1.630148 GCAGCCTTAGTAGTGTCACG 58.370 55.000 0.00 0.00 0.00 4.35
4720 4874 1.736032 GCAGCCTTAGTAGTGTCACGG 60.736 57.143 0.00 0.00 0.00 4.94
4730 4884 1.266178 AGTGTCACGGATGATGTGGA 58.734 50.000 0.00 0.00 37.14 4.02
4733 4887 2.352651 GTGTCACGGATGATGTGGAATG 59.647 50.000 0.00 0.00 37.14 2.67
4741 4895 3.181483 GGATGATGTGGAATGTTTCTGCC 60.181 47.826 0.00 0.00 0.00 4.85
4749 4903 4.815846 GTGGAATGTTTCTGCCAATTTGTT 59.184 37.500 0.00 0.00 31.18 2.83
4757 4911 7.669427 TGTTTCTGCCAATTTGTTGAAGATAT 58.331 30.769 0.00 0.00 0.00 1.63
4759 4913 9.807649 GTTTCTGCCAATTTGTTGAAGATATAT 57.192 29.630 0.00 0.00 0.00 0.86
4760 4914 9.806203 TTTCTGCCAATTTGTTGAAGATATATG 57.194 29.630 0.00 0.00 0.00 1.78
4761 4915 8.750515 TCTGCCAATTTGTTGAAGATATATGA 57.249 30.769 0.00 0.00 0.00 2.15
4762 4916 8.623903 TCTGCCAATTTGTTGAAGATATATGAC 58.376 33.333 0.00 0.00 0.00 3.06
4763 4917 7.715657 TGCCAATTTGTTGAAGATATATGACC 58.284 34.615 0.00 0.00 0.00 4.02
4764 4918 7.341512 TGCCAATTTGTTGAAGATATATGACCA 59.658 33.333 0.00 0.00 0.00 4.02
4766 4920 8.906867 CCAATTTGTTGAAGATATATGACCAGT 58.093 33.333 0.00 0.00 0.00 4.00
4767 4921 9.726232 CAATTTGTTGAAGATATATGACCAGTG 57.274 33.333 0.00 0.00 0.00 3.66
4768 4922 6.925610 TTGTTGAAGATATATGACCAGTGC 57.074 37.500 0.00 0.00 0.00 4.40
4769 4923 5.049828 TGTTGAAGATATATGACCAGTGCG 58.950 41.667 0.00 0.00 0.00 5.34
4770 4924 4.937201 TGAAGATATATGACCAGTGCGT 57.063 40.909 0.00 0.00 0.00 5.24
4771 4925 5.276461 TGAAGATATATGACCAGTGCGTT 57.724 39.130 0.00 0.00 0.00 4.84
4784 4938 3.070018 CAGTGCGTTTGGATTCTTCTCT 58.930 45.455 0.00 0.00 0.00 3.10
4802 4956 6.710744 TCTTCTCTAAACATTTCCCAGTTGTC 59.289 38.462 0.00 0.00 0.00 3.18
4804 4958 5.997746 TCTCTAAACATTTCCCAGTTGTCAG 59.002 40.000 0.00 0.00 0.00 3.51
4814 4968 0.464036 CAGTTGTCAGCGCCCCTATA 59.536 55.000 2.29 0.00 0.00 1.31
4834 4988 3.631145 AGTGCTTGTGTTGCTGTTATG 57.369 42.857 0.00 0.00 0.00 1.90
4855 5009 8.784043 GTTATGTTCTGAACCATAAAGAACTGT 58.216 33.333 17.26 7.18 46.44 3.55
4865 5019 4.274459 CCATAAAGAACTGTATCAGGCTGC 59.726 45.833 10.34 0.00 35.51 5.25
4872 5026 3.347216 ACTGTATCAGGCTGCGATTTTT 58.653 40.909 10.34 0.00 35.51 1.94
4875 5029 4.009675 TGTATCAGGCTGCGATTTTTCTT 58.990 39.130 10.34 0.00 0.00 2.52
4876 5030 3.772060 ATCAGGCTGCGATTTTTCTTC 57.228 42.857 10.34 0.00 0.00 2.87
4878 5032 0.804989 AGGCTGCGATTTTTCTTCCG 59.195 50.000 0.00 0.00 0.00 4.30
4882 5036 2.911102 GCTGCGATTTTTCTTCCGAAAG 59.089 45.455 0.00 0.00 40.04 2.62
4898 5052 3.325870 CGAAAGGAAATGAAAAAGGGCC 58.674 45.455 0.00 0.00 0.00 5.80
4905 5064 3.769739 AATGAAAAAGGGCCAAGTTCC 57.230 42.857 6.18 0.00 0.00 3.62
4940 5099 7.677454 TCATATTCACAATGCCATCTACATC 57.323 36.000 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.159014 TGTGTGCACGTTCTTAAGGAGT 60.159 45.455 13.13 0.00 0.00 3.85
1 2 2.479837 TGTGTGCACGTTCTTAAGGAG 58.520 47.619 13.13 0.00 0.00 3.69
2 3 2.605837 TGTGTGCACGTTCTTAAGGA 57.394 45.000 13.13 0.00 0.00 3.36
3 4 3.994392 AGTATGTGTGCACGTTCTTAAGG 59.006 43.478 13.13 0.00 0.00 2.69
4 5 6.887376 ATAGTATGTGTGCACGTTCTTAAG 57.113 37.500 13.13 0.00 31.72 1.85
5 6 7.661127 AAATAGTATGTGTGCACGTTCTTAA 57.339 32.000 13.13 0.00 31.72 1.85
6 7 8.936070 ATAAATAGTATGTGTGCACGTTCTTA 57.064 30.769 13.13 5.36 31.72 2.10
7 8 7.011109 GGATAAATAGTATGTGTGCACGTTCTT 59.989 37.037 13.13 6.29 31.72 2.52
8 9 6.479001 GGATAAATAGTATGTGTGCACGTTCT 59.521 38.462 13.13 8.47 33.47 3.01
9 10 6.292703 GGGATAAATAGTATGTGTGCACGTTC 60.293 42.308 13.13 5.97 0.00 3.95
10 11 5.526111 GGGATAAATAGTATGTGTGCACGTT 59.474 40.000 13.13 1.60 0.00 3.99
11 12 5.054477 GGGATAAATAGTATGTGTGCACGT 58.946 41.667 13.13 3.31 0.00 4.49
12 13 5.297547 AGGGATAAATAGTATGTGTGCACG 58.702 41.667 13.13 0.00 0.00 5.34
13 14 6.365247 CGTAGGGATAAATAGTATGTGTGCAC 59.635 42.308 10.75 10.75 0.00 4.57
14 15 6.265876 TCGTAGGGATAAATAGTATGTGTGCA 59.734 38.462 0.00 0.00 0.00 4.57
15 16 6.684686 TCGTAGGGATAAATAGTATGTGTGC 58.315 40.000 0.00 0.00 0.00 4.57
16 17 7.883217 ACTCGTAGGGATAAATAGTATGTGTG 58.117 38.462 0.00 0.00 0.00 3.82
17 18 9.750783 ATACTCGTAGGGATAAATAGTATGTGT 57.249 33.333 0.00 0.00 29.84 3.72
26 27 9.597681 TCTTCCTAAATACTCGTAGGGATAAAT 57.402 33.333 0.00 0.00 37.96 1.40
27 28 9.597681 ATCTTCCTAAATACTCGTAGGGATAAA 57.402 33.333 0.00 0.00 37.96 1.40
28 29 9.597681 AATCTTCCTAAATACTCGTAGGGATAA 57.402 33.333 0.00 0.00 37.96 1.75
29 30 9.021807 CAATCTTCCTAAATACTCGTAGGGATA 57.978 37.037 0.00 0.00 37.96 2.59
30 31 7.728981 TCAATCTTCCTAAATACTCGTAGGGAT 59.271 37.037 0.00 0.00 37.96 3.85
31 32 7.064866 TCAATCTTCCTAAATACTCGTAGGGA 58.935 38.462 0.00 0.00 37.96 4.20
32 33 7.014422 ACTCAATCTTCCTAAATACTCGTAGGG 59.986 40.741 0.00 0.00 37.96 3.53
33 34 7.942990 ACTCAATCTTCCTAAATACTCGTAGG 58.057 38.462 0.00 0.00 38.64 3.18
34 35 8.077386 GGACTCAATCTTCCTAAATACTCGTAG 58.923 40.741 0.00 0.00 0.00 3.51
35 36 7.255035 CGGACTCAATCTTCCTAAATACTCGTA 60.255 40.741 0.00 0.00 0.00 3.43
36 37 6.459848 CGGACTCAATCTTCCTAAATACTCGT 60.460 42.308 0.00 0.00 0.00 4.18
37 38 5.915758 CGGACTCAATCTTCCTAAATACTCG 59.084 44.000 0.00 0.00 0.00 4.18
38 39 5.692654 GCGGACTCAATCTTCCTAAATACTC 59.307 44.000 0.00 0.00 0.00 2.59
39 40 5.128827 TGCGGACTCAATCTTCCTAAATACT 59.871 40.000 0.00 0.00 0.00 2.12
40 41 5.234543 GTGCGGACTCAATCTTCCTAAATAC 59.765 44.000 0.00 0.00 0.00 1.89
41 42 5.105106 TGTGCGGACTCAATCTTCCTAAATA 60.105 40.000 8.99 0.00 0.00 1.40
42 43 4.192317 GTGCGGACTCAATCTTCCTAAAT 58.808 43.478 0.00 0.00 0.00 1.40
43 44 3.007506 TGTGCGGACTCAATCTTCCTAAA 59.992 43.478 8.99 0.00 0.00 1.85
44 45 2.565391 TGTGCGGACTCAATCTTCCTAA 59.435 45.455 8.99 0.00 0.00 2.69
45 46 2.176045 TGTGCGGACTCAATCTTCCTA 58.824 47.619 8.99 0.00 0.00 2.94
46 47 0.976641 TGTGCGGACTCAATCTTCCT 59.023 50.000 8.99 0.00 0.00 3.36
47 48 2.029838 ATGTGCGGACTCAATCTTCC 57.970 50.000 8.99 0.00 0.00 3.46
48 49 4.425577 AAAATGTGCGGACTCAATCTTC 57.574 40.909 8.99 0.00 0.00 2.87
49 50 5.957842 TTAAAATGTGCGGACTCAATCTT 57.042 34.783 8.99 0.00 0.00 2.40
50 51 5.957842 TTTAAAATGTGCGGACTCAATCT 57.042 34.783 8.99 0.00 0.00 2.40
51 52 7.328249 TCAATTTTAAAATGTGCGGACTCAATC 59.672 33.333 14.04 0.00 0.00 2.67
52 53 7.151308 TCAATTTTAAAATGTGCGGACTCAAT 58.849 30.769 14.04 0.00 0.00 2.57
53 54 6.507900 TCAATTTTAAAATGTGCGGACTCAA 58.492 32.000 14.04 0.00 0.00 3.02
54 55 6.078202 TCAATTTTAAAATGTGCGGACTCA 57.922 33.333 14.04 0.00 0.00 3.41
55 56 6.806249 TCATCAATTTTAAAATGTGCGGACTC 59.194 34.615 14.04 0.00 0.00 3.36
56 57 6.686630 TCATCAATTTTAAAATGTGCGGACT 58.313 32.000 14.04 0.00 0.00 3.85
57 58 6.942886 TCATCAATTTTAAAATGTGCGGAC 57.057 33.333 14.04 0.00 0.00 4.79
58 59 7.953158 TTTCATCAATTTTAAAATGTGCGGA 57.047 28.000 14.04 11.10 0.00 5.54
59 60 9.904647 CTATTTCATCAATTTTAAAATGTGCGG 57.095 29.630 14.04 9.49 0.00 5.69
73 74 9.241919 TGGTGTGTTTATGACTATTTCATCAAT 57.758 29.630 0.00 0.00 41.53 2.57
74 75 8.628630 TGGTGTGTTTATGACTATTTCATCAA 57.371 30.769 0.00 0.00 41.53 2.57
75 76 8.100164 TCTGGTGTGTTTATGACTATTTCATCA 58.900 33.333 0.00 0.00 41.53 3.07
76 77 8.492673 TCTGGTGTGTTTATGACTATTTCATC 57.507 34.615 0.00 0.00 41.53 2.92
78 79 7.450074 ACTCTGGTGTGTTTATGACTATTTCA 58.550 34.615 0.00 0.00 39.11 2.69
79 80 7.907214 ACTCTGGTGTGTTTATGACTATTTC 57.093 36.000 0.00 0.00 0.00 2.17
80 81 7.936847 TCAACTCTGGTGTGTTTATGACTATTT 59.063 33.333 0.00 0.00 0.00 1.40
81 82 7.387948 GTCAACTCTGGTGTGTTTATGACTATT 59.612 37.037 0.00 0.00 0.00 1.73
82 83 6.874134 GTCAACTCTGGTGTGTTTATGACTAT 59.126 38.462 0.00 0.00 0.00 2.12
83 84 6.183360 TGTCAACTCTGGTGTGTTTATGACTA 60.183 38.462 0.00 0.00 0.00 2.59
84 85 5.057149 GTCAACTCTGGTGTGTTTATGACT 58.943 41.667 0.00 0.00 0.00 3.41
85 86 4.814234 TGTCAACTCTGGTGTGTTTATGAC 59.186 41.667 0.00 0.00 0.00 3.06
86 87 5.029807 TGTCAACTCTGGTGTGTTTATGA 57.970 39.130 0.00 0.00 0.00 2.15
87 88 5.749596 TTGTCAACTCTGGTGTGTTTATG 57.250 39.130 0.00 0.00 0.00 1.90
88 89 5.650266 TGTTTGTCAACTCTGGTGTGTTTAT 59.350 36.000 0.00 0.00 33.58 1.40
89 90 5.004448 TGTTTGTCAACTCTGGTGTGTTTA 58.996 37.500 0.00 0.00 33.58 2.01
90 91 3.823873 TGTTTGTCAACTCTGGTGTGTTT 59.176 39.130 0.00 0.00 33.58 2.83
91 92 3.190535 GTGTTTGTCAACTCTGGTGTGTT 59.809 43.478 0.00 0.00 33.58 3.32
92 93 2.747446 GTGTTTGTCAACTCTGGTGTGT 59.253 45.455 0.00 0.00 33.58 3.72
93 94 2.746904 TGTGTTTGTCAACTCTGGTGTG 59.253 45.455 0.00 0.00 33.58 3.82
94 95 3.066291 TGTGTTTGTCAACTCTGGTGT 57.934 42.857 0.00 0.00 33.58 4.16
95 96 3.303329 CGATGTGTTTGTCAACTCTGGTG 60.303 47.826 0.00 0.00 33.58 4.17
96 97 2.872245 CGATGTGTTTGTCAACTCTGGT 59.128 45.455 0.00 0.00 33.58 4.00
97 98 2.872245 ACGATGTGTTTGTCAACTCTGG 59.128 45.455 0.00 0.00 33.58 3.86
98 99 4.084537 GGTACGATGTGTTTGTCAACTCTG 60.085 45.833 0.00 0.00 33.58 3.35
99 100 4.056050 GGTACGATGTGTTTGTCAACTCT 58.944 43.478 0.00 0.00 33.58 3.24
100 101 3.805422 TGGTACGATGTGTTTGTCAACTC 59.195 43.478 0.00 0.00 33.58 3.01
101 102 3.799366 TGGTACGATGTGTTTGTCAACT 58.201 40.909 0.00 0.00 33.58 3.16
102 103 4.742438 ATGGTACGATGTGTTTGTCAAC 57.258 40.909 0.00 0.00 0.00 3.18
103 104 4.816925 TCAATGGTACGATGTGTTTGTCAA 59.183 37.500 0.00 0.00 0.00 3.18
104 105 4.381411 TCAATGGTACGATGTGTTTGTCA 58.619 39.130 0.00 0.00 0.00 3.58
105 106 5.351233 TTCAATGGTACGATGTGTTTGTC 57.649 39.130 0.00 0.00 0.00 3.18
106 107 5.759506 TTTCAATGGTACGATGTGTTTGT 57.240 34.783 0.00 0.00 0.00 2.83
127 128 8.962884 ATTTCAAGTTTTCTGGTGCTATTTTT 57.037 26.923 0.00 0.00 0.00 1.94
132 133 9.691362 GAATTTATTTCAAGTTTTCTGGTGCTA 57.309 29.630 0.00 0.00 34.27 3.49
133 134 8.203485 TGAATTTATTTCAAGTTTTCTGGTGCT 58.797 29.630 0.00 0.00 41.38 4.40
134 135 8.364129 TGAATTTATTTCAAGTTTTCTGGTGC 57.636 30.769 0.00 0.00 41.38 5.01
135 136 8.981647 CCTGAATTTATTTCAAGTTTTCTGGTG 58.018 33.333 0.00 0.00 43.64 4.17
136 137 8.923270 TCCTGAATTTATTTCAAGTTTTCTGGT 58.077 29.630 0.00 0.00 43.64 4.00
137 138 9.415544 CTCCTGAATTTATTTCAAGTTTTCTGG 57.584 33.333 0.00 0.00 43.64 3.86
140 141 9.118236 CGTCTCCTGAATTTATTTCAAGTTTTC 57.882 33.333 0.00 0.00 43.64 2.29
141 142 8.082242 CCGTCTCCTGAATTTATTTCAAGTTTT 58.918 33.333 0.00 0.00 43.64 2.43
142 143 7.447238 TCCGTCTCCTGAATTTATTTCAAGTTT 59.553 33.333 0.00 0.00 43.64 2.66
143 144 6.940298 TCCGTCTCCTGAATTTATTTCAAGTT 59.060 34.615 0.00 0.00 43.64 2.66
144 145 6.472887 TCCGTCTCCTGAATTTATTTCAAGT 58.527 36.000 0.00 0.00 43.64 3.16
145 146 6.985188 TCCGTCTCCTGAATTTATTTCAAG 57.015 37.500 0.00 0.00 43.64 3.02
146 147 6.128391 CGTTCCGTCTCCTGAATTTATTTCAA 60.128 38.462 0.00 0.00 43.64 2.69
147 148 5.350365 CGTTCCGTCTCCTGAATTTATTTCA 59.650 40.000 0.00 0.00 42.09 2.69
148 149 5.726963 GCGTTCCGTCTCCTGAATTTATTTC 60.727 44.000 0.00 0.00 34.72 2.17
149 150 4.094442 GCGTTCCGTCTCCTGAATTTATTT 59.906 41.667 0.00 0.00 0.00 1.40
150 151 3.621715 GCGTTCCGTCTCCTGAATTTATT 59.378 43.478 0.00 0.00 0.00 1.40
151 152 3.195661 GCGTTCCGTCTCCTGAATTTAT 58.804 45.455 0.00 0.00 0.00 1.40
152 153 2.613691 GCGTTCCGTCTCCTGAATTTA 58.386 47.619 0.00 0.00 0.00 1.40
153 154 1.439679 GCGTTCCGTCTCCTGAATTT 58.560 50.000 0.00 0.00 0.00 1.82
154 155 0.391263 GGCGTTCCGTCTCCTGAATT 60.391 55.000 0.00 0.00 0.00 2.17
155 156 1.218316 GGCGTTCCGTCTCCTGAAT 59.782 57.895 0.00 0.00 0.00 2.57
156 157 1.750341 TTGGCGTTCCGTCTCCTGAA 61.750 55.000 0.00 0.00 34.14 3.02
157 158 1.541310 ATTGGCGTTCCGTCTCCTGA 61.541 55.000 0.00 0.00 34.14 3.86
158 159 0.673644 AATTGGCGTTCCGTCTCCTG 60.674 55.000 0.00 0.00 34.14 3.86
159 160 0.036306 AAATTGGCGTTCCGTCTCCT 59.964 50.000 0.00 0.00 34.14 3.69
160 161 0.879090 AAAATTGGCGTTCCGTCTCC 59.121 50.000 0.00 0.00 34.14 3.71
161 162 2.473376 CGTAAAATTGGCGTTCCGTCTC 60.473 50.000 0.00 0.00 34.14 3.36
162 163 1.461897 CGTAAAATTGGCGTTCCGTCT 59.538 47.619 0.00 0.00 34.14 4.18
163 164 1.195222 ACGTAAAATTGGCGTTCCGTC 59.805 47.619 0.00 0.00 35.11 4.79
164 165 1.195222 GACGTAAAATTGGCGTTCCGT 59.805 47.619 0.00 0.00 39.06 4.69
165 166 1.464521 GGACGTAAAATTGGCGTTCCG 60.465 52.381 0.00 0.00 39.06 4.30
166 167 1.808343 AGGACGTAAAATTGGCGTTCC 59.192 47.619 0.00 6.78 39.06 3.62
167 168 2.846693 CAGGACGTAAAATTGGCGTTC 58.153 47.619 0.00 2.69 39.06 3.95
168 169 1.068816 GCAGGACGTAAAATTGGCGTT 60.069 47.619 0.00 0.00 39.06 4.84
169 170 0.519961 GCAGGACGTAAAATTGGCGT 59.480 50.000 0.00 2.54 41.81 5.68
170 171 0.519519 TGCAGGACGTAAAATTGGCG 59.480 50.000 0.00 0.00 0.00 5.69
171 172 1.732405 GCTGCAGGACGTAAAATTGGC 60.732 52.381 17.12 0.00 0.00 4.52
172 173 1.812571 AGCTGCAGGACGTAAAATTGG 59.187 47.619 17.12 0.00 0.00 3.16
173 174 3.435327 TGTAGCTGCAGGACGTAAAATTG 59.565 43.478 17.12 0.00 0.00 2.32
174 175 3.670625 TGTAGCTGCAGGACGTAAAATT 58.329 40.909 17.12 0.00 0.00 1.82
175 176 3.328382 TGTAGCTGCAGGACGTAAAAT 57.672 42.857 17.12 0.00 0.00 1.82
176 177 2.823924 TGTAGCTGCAGGACGTAAAA 57.176 45.000 17.12 0.00 0.00 1.52
177 178 2.823924 TTGTAGCTGCAGGACGTAAA 57.176 45.000 17.12 0.00 0.00 2.01
178 179 2.823924 TTTGTAGCTGCAGGACGTAA 57.176 45.000 17.12 0.00 0.00 3.18
179 180 2.028476 ACATTTGTAGCTGCAGGACGTA 60.028 45.455 17.12 0.00 0.00 3.57
180 181 1.270839 ACATTTGTAGCTGCAGGACGT 60.271 47.619 17.12 0.00 0.00 4.34
181 182 1.394917 GACATTTGTAGCTGCAGGACG 59.605 52.381 17.12 0.00 0.00 4.79
182 183 2.704572 AGACATTTGTAGCTGCAGGAC 58.295 47.619 17.12 0.00 0.00 3.85
183 184 3.076621 CAAGACATTTGTAGCTGCAGGA 58.923 45.455 17.12 0.00 0.00 3.86
184 185 2.415090 GCAAGACATTTGTAGCTGCAGG 60.415 50.000 17.12 1.76 31.32 4.85
185 186 2.486982 AGCAAGACATTTGTAGCTGCAG 59.513 45.455 10.11 10.11 32.17 4.41
186 187 2.507484 AGCAAGACATTTGTAGCTGCA 58.493 42.857 0.00 0.00 32.17 4.41
187 188 4.685169 TTAGCAAGACATTTGTAGCTGC 57.315 40.909 0.00 0.00 34.26 5.25
188 189 7.307694 TGAAATTAGCAAGACATTTGTAGCTG 58.692 34.615 0.00 0.44 34.26 4.24
189 190 7.452880 TGAAATTAGCAAGACATTTGTAGCT 57.547 32.000 0.00 0.00 35.73 3.32
190 191 6.252228 GCTGAAATTAGCAAGACATTTGTAGC 59.748 38.462 0.00 0.00 43.17 3.58
191 192 6.749118 GGCTGAAATTAGCAAGACATTTGTAG 59.251 38.462 2.76 0.00 45.46 2.74
192 193 6.434028 AGGCTGAAATTAGCAAGACATTTGTA 59.566 34.615 2.76 0.00 45.46 2.41
193 194 5.244626 AGGCTGAAATTAGCAAGACATTTGT 59.755 36.000 2.76 0.00 45.46 2.83
194 195 5.575606 CAGGCTGAAATTAGCAAGACATTTG 59.424 40.000 9.42 0.00 45.46 2.32
195 196 5.477984 TCAGGCTGAAATTAGCAAGACATTT 59.522 36.000 16.28 0.00 45.46 2.32
196 197 5.012239 TCAGGCTGAAATTAGCAAGACATT 58.988 37.500 16.28 0.00 45.46 2.71
197 198 4.592942 TCAGGCTGAAATTAGCAAGACAT 58.407 39.130 16.28 0.00 45.46 3.06
198 199 4.019792 TCAGGCTGAAATTAGCAAGACA 57.980 40.909 16.28 0.00 45.46 3.41
199 200 5.157067 GTTTCAGGCTGAAATTAGCAAGAC 58.843 41.667 36.92 22.09 46.55 3.01
200 201 4.826733 TGTTTCAGGCTGAAATTAGCAAGA 59.173 37.500 36.92 15.61 46.55 3.02
201 202 5.125100 TGTTTCAGGCTGAAATTAGCAAG 57.875 39.130 36.92 0.00 46.55 4.01
202 203 5.528043 TTGTTTCAGGCTGAAATTAGCAA 57.472 34.783 36.92 31.21 46.55 3.91
203 204 5.528043 TTTGTTTCAGGCTGAAATTAGCA 57.472 34.783 36.92 28.31 46.55 3.49
204 205 8.532977 TTATTTTGTTTCAGGCTGAAATTAGC 57.467 30.769 36.92 26.45 46.55 3.09
205 206 8.650714 GCTTATTTTGTTTCAGGCTGAAATTAG 58.349 33.333 36.92 25.63 46.55 1.73
206 207 8.367156 AGCTTATTTTGTTTCAGGCTGAAATTA 58.633 29.630 36.92 27.62 46.55 1.40
217 218 4.584325 AGAGGCACAGCTTATTTTGTTTCA 59.416 37.500 0.00 0.00 0.00 2.69
237 238 8.229137 CAGCAGTAGAGAAAAATCTCAAAAGAG 58.771 37.037 8.42 0.00 39.12 2.85
247 248 5.234466 ACCTGACAGCAGTAGAGAAAAAT 57.766 39.130 0.00 0.00 40.63 1.82
259 260 1.480212 ATCCACCGAACCTGACAGCA 61.480 55.000 0.00 0.00 0.00 4.41
280 295 6.125029 CCCATGATGAGAAGTGATTTTACCT 58.875 40.000 0.00 0.00 0.00 3.08
291 306 2.602257 TACGCACCCATGATGAGAAG 57.398 50.000 7.48 0.00 0.00 2.85
319 334 6.929049 TCAGTCAGTTATTACAGACAGTTTGG 59.071 38.462 9.61 0.00 41.69 3.28
344 359 2.040412 GGGGATTTTCACTCCAGTCAGT 59.960 50.000 0.00 0.00 34.24 3.41
345 360 2.619074 GGGGGATTTTCACTCCAGTCAG 60.619 54.545 0.00 0.00 34.24 3.51
346 361 1.354368 GGGGGATTTTCACTCCAGTCA 59.646 52.381 0.00 0.00 34.24 3.41
347 362 1.636003 AGGGGGATTTTCACTCCAGTC 59.364 52.381 0.00 0.00 34.24 3.51
348 363 1.636003 GAGGGGGATTTTCACTCCAGT 59.364 52.381 0.00 0.00 34.24 4.00
349 364 1.064389 GGAGGGGGATTTTCACTCCAG 60.064 57.143 7.44 0.00 45.45 3.86
350 365 0.999712 GGAGGGGGATTTTCACTCCA 59.000 55.000 7.44 0.00 45.45 3.86
351 366 1.299939 AGGAGGGGGATTTTCACTCC 58.700 55.000 4.33 4.33 46.27 3.85
352 367 2.357257 GGAAGGAGGGGGATTTTCACTC 60.357 54.545 0.00 0.00 0.00 3.51
1203 1218 2.203126 GCCGGGAAGATCAGGCTG 60.203 66.667 8.58 8.58 45.67 4.85
1248 1267 3.761218 CAGGTAGAGACGGATGCATATCT 59.239 47.826 0.00 2.92 33.68 1.98
1266 1285 0.320374 TTCTCGGAATTCACGCAGGT 59.680 50.000 7.93 0.00 0.00 4.00
1300 1319 1.854743 CGAATAGCACACACGATCTGG 59.145 52.381 0.00 0.00 0.00 3.86
1315 1334 0.179121 ATCACGCGCCAGTTCGAATA 60.179 50.000 5.73 0.00 0.00 1.75
1350 1369 2.872858 GGATACGAACATCCAGCCTTTC 59.127 50.000 9.57 0.00 43.52 2.62
1410 1431 3.080300 AGGACAACAAACACTGGAACA 57.920 42.857 0.00 0.00 0.00 3.18
1446 1467 2.995939 GGCCACAAAAGAAGCTAATTGC 59.004 45.455 0.00 0.00 43.29 3.56
1447 1468 3.057596 TCGGCCACAAAAGAAGCTAATTG 60.058 43.478 2.24 0.00 0.00 2.32
1477 1498 7.067859 AGTGGAGTATAGCGTCAATAGTTAACA 59.932 37.037 8.61 0.00 0.00 2.41
1485 1506 6.004574 TCATCTAGTGGAGTATAGCGTCAAT 58.995 40.000 0.00 0.00 0.00 2.57
1594 1615 9.750125 AAAATGAAAGACTAGAAAACCATGTTC 57.250 29.630 0.00 0.00 0.00 3.18
1614 1635 4.644234 TGCTCTGGTGAAGAACAAAAATGA 59.356 37.500 0.00 0.00 33.37 2.57
1629 1651 6.711277 TGTCTGTTCTATTTTATGCTCTGGT 58.289 36.000 0.00 0.00 0.00 4.00
1635 1657 9.282247 CAGAAACATGTCTGTTCTATTTTATGC 57.718 33.333 10.24 0.00 44.83 3.14
1725 1747 7.856145 AAAGGCATCTATCAAGTTCTAACAG 57.144 36.000 0.00 0.00 0.00 3.16
1777 1799 6.990341 TGAGTCAACATTCATATGACAAGG 57.010 37.500 4.48 0.00 44.55 3.61
1797 1819 7.840342 ATAAGAGTTCAACAAGCACTATGAG 57.160 36.000 0.00 0.00 0.00 2.90
1899 1925 2.017049 GCACCACAATAGCCCTTAGTG 58.983 52.381 0.00 0.00 33.66 2.74
1919 2065 8.567285 AGAATTCACAAATTAGAGTAAGGTGG 57.433 34.615 8.44 0.00 35.21 4.61
2067 2213 1.208293 TCCAAAAACAAACCACCCTGC 59.792 47.619 0.00 0.00 0.00 4.85
2370 2516 8.599624 ATGGTTTCTCAAAATCATCTTGGTAT 57.400 30.769 0.00 0.00 41.37 2.73
2445 2591 3.138304 GTTACCACAATCACAGCACTCA 58.862 45.455 0.00 0.00 0.00 3.41
2733 2879 0.853530 AGTGCTTCCCTGTTTCCCTT 59.146 50.000 0.00 0.00 0.00 3.95
2754 2900 4.608269 TCAATCTCTCTGGATCTGTCACT 58.392 43.478 0.00 0.00 0.00 3.41
2766 2912 3.262915 CCACTGGGTCTTTCAATCTCTCT 59.737 47.826 0.00 0.00 0.00 3.10
2961 3107 2.368221 TGTTGCCCCTTTCAATCCTTTG 59.632 45.455 0.00 0.00 0.00 2.77
2968 3114 2.586425 CTCTTCTGTTGCCCCTTTCAA 58.414 47.619 0.00 0.00 0.00 2.69
3081 3227 1.609208 TGCCAGACAGAAGCCTTTTC 58.391 50.000 0.00 0.00 0.00 2.29
3150 3296 2.039879 GGTGAACTGGTACCCACATTCT 59.960 50.000 17.46 0.00 29.64 2.40
3186 3332 6.939622 AGATGTCTTCATGTCAGTGAACATA 58.060 36.000 0.00 0.00 37.78 2.29
3249 3395 0.623723 TAGGGCCATCACCAAGTTCC 59.376 55.000 6.18 0.00 0.00 3.62
3285 3431 0.250467 GCCAAGAGCCAGTTGTGAGA 60.250 55.000 0.00 0.00 34.35 3.27
3480 3626 3.685139 ACACACATCTGGTAAGTGGAG 57.315 47.619 0.00 0.00 37.58 3.86
3513 3659 1.737793 GTAAGCCCATCGGAAGTGTTG 59.262 52.381 0.00 0.00 0.00 3.33
3522 3668 3.195661 GTCTTTGTAGGTAAGCCCATCG 58.804 50.000 0.00 0.00 34.66 3.84
3528 3674 3.552294 GCTCGATGTCTTTGTAGGTAAGC 59.448 47.826 0.00 0.00 0.00 3.09
3533 3679 2.349886 GCTTGCTCGATGTCTTTGTAGG 59.650 50.000 0.00 0.00 0.00 3.18
3558 3704 2.379972 AGGTCTGTGGAAGGTATCTCG 58.620 52.381 0.00 0.00 0.00 4.04
3675 3821 5.321959 TGCTTGTGAACTTGTCATTGAAA 57.678 34.783 0.00 0.00 38.90 2.69
3774 3920 1.271434 GGTTTCCTGTCCTCCTCAACC 60.271 57.143 0.00 0.00 0.00 3.77
3942 4088 2.099427 GTCCCTCTCTAAGAATTCGCGT 59.901 50.000 5.77 0.00 0.00 6.01
3984 4130 3.944650 TGGCTTTTTATGCAAGATAGCGA 59.055 39.130 0.00 0.00 37.31 4.93
4123 4269 7.181143 TCGATAACCGAATTTAATAACTGCC 57.819 36.000 0.00 0.00 45.43 4.85
4150 4296 3.132824 GGGGTAAAGCCTCCATTTCAATG 59.867 47.826 0.00 0.00 37.43 2.82
4253 4404 5.697082 AAATGCAACATCCAATACCCAAT 57.303 34.783 0.00 0.00 0.00 3.16
4306 4457 7.914346 GCCTCTTTGATTCAAATGACTTCTATG 59.086 37.037 12.04 0.00 32.70 2.23
4405 4557 3.485947 TCAGGAACATGCGCAATTTAC 57.514 42.857 17.11 11.67 0.00 2.01
4408 4560 2.231964 ACATTCAGGAACATGCGCAATT 59.768 40.909 17.11 12.77 0.00 2.32
4409 4561 1.820519 ACATTCAGGAACATGCGCAAT 59.179 42.857 17.11 1.94 0.00 3.56
4410 4562 1.246649 ACATTCAGGAACATGCGCAA 58.753 45.000 17.11 0.00 0.00 4.85
4412 4564 3.485947 TTTACATTCAGGAACATGCGC 57.514 42.857 0.00 0.00 0.00 6.09
4413 4565 3.792956 GCATTTACATTCAGGAACATGCG 59.207 43.478 0.00 0.00 0.00 4.73
4415 4567 6.392354 AGTTGCATTTACATTCAGGAACATG 58.608 36.000 0.00 0.00 33.70 3.21
4418 4570 6.922957 TCAAAGTTGCATTTACATTCAGGAAC 59.077 34.615 0.00 0.00 0.00 3.62
4419 4571 6.922957 GTCAAAGTTGCATTTACATTCAGGAA 59.077 34.615 0.00 0.00 0.00 3.36
4420 4572 6.446318 GTCAAAGTTGCATTTACATTCAGGA 58.554 36.000 0.00 0.00 0.00 3.86
4421 4573 5.343058 CGTCAAAGTTGCATTTACATTCAGG 59.657 40.000 0.00 0.00 0.00 3.86
4422 4574 6.142139 TCGTCAAAGTTGCATTTACATTCAG 58.858 36.000 0.00 0.00 0.00 3.02
4423 4575 6.066054 TCGTCAAAGTTGCATTTACATTCA 57.934 33.333 0.00 0.00 0.00 2.57
4424 4576 5.059710 GCTCGTCAAAGTTGCATTTACATTC 59.940 40.000 0.00 0.00 0.00 2.67
4425 4577 4.917415 GCTCGTCAAAGTTGCATTTACATT 59.083 37.500 0.00 0.00 0.00 2.71
4426 4578 4.475944 GCTCGTCAAAGTTGCATTTACAT 58.524 39.130 0.00 0.00 0.00 2.29
4431 4583 1.267806 CAGGCTCGTCAAAGTTGCATT 59.732 47.619 0.00 0.00 0.00 3.56
4446 4598 4.640201 ACATACGCAATTTACATTCAGGCT 59.360 37.500 0.00 0.00 0.00 4.58
4456 4608 4.733230 GCATGCAGGAACATACGCAATTTA 60.733 41.667 14.21 0.00 38.01 1.40
4463 4615 1.522676 CGTAGCATGCAGGAACATACG 59.477 52.381 21.98 18.31 0.00 3.06
4477 4629 3.118775 ACAAATGAGTAGGCATCGTAGCA 60.119 43.478 4.43 0.00 35.83 3.49
4488 4640 0.519175 GCGTGCGCACAAATGAGTAG 60.519 55.000 37.03 19.79 41.49 2.57
4489 4641 0.948623 AGCGTGCGCACAAATGAGTA 60.949 50.000 37.03 0.00 44.88 2.59
4492 4644 1.082169 GAAGCGTGCGCACAAATGA 60.082 52.632 37.03 0.00 44.88 2.57
4516 4670 2.567169 TGGACGAATCTTGACACAGGAT 59.433 45.455 0.00 0.00 31.52 3.24
4517 4671 1.967779 TGGACGAATCTTGACACAGGA 59.032 47.619 0.00 0.00 0.00 3.86
4545 4699 2.793278 ACGACATTCCAAACAAAGCC 57.207 45.000 0.00 0.00 0.00 4.35
4546 4700 4.109050 TGAAACGACATTCCAAACAAAGC 58.891 39.130 0.00 0.00 0.00 3.51
4547 4701 6.208644 AGATGAAACGACATTCCAAACAAAG 58.791 36.000 0.00 0.00 0.00 2.77
4548 4702 6.142818 AGATGAAACGACATTCCAAACAAA 57.857 33.333 0.00 0.00 0.00 2.83
4550 4704 4.819088 TGAGATGAAACGACATTCCAAACA 59.181 37.500 0.00 0.00 0.00 2.83
4551 4705 5.356882 TGAGATGAAACGACATTCCAAAC 57.643 39.130 0.00 0.00 0.00 2.93
4552 4706 6.384258 TTTGAGATGAAACGACATTCCAAA 57.616 33.333 0.00 4.53 33.82 3.28
4553 4707 6.573664 ATTTGAGATGAAACGACATTCCAA 57.426 33.333 0.00 0.00 0.00 3.53
4554 4708 6.652900 TGTATTTGAGATGAAACGACATTCCA 59.347 34.615 0.00 0.00 0.00 3.53
4555 4709 6.961554 GTGTATTTGAGATGAAACGACATTCC 59.038 38.462 0.00 0.00 0.00 3.01
4556 4710 6.961554 GGTGTATTTGAGATGAAACGACATTC 59.038 38.462 0.00 0.00 0.00 2.67
4557 4711 6.655003 AGGTGTATTTGAGATGAAACGACATT 59.345 34.615 0.00 0.00 0.00 2.71
4558 4712 6.092670 CAGGTGTATTTGAGATGAAACGACAT 59.907 38.462 0.00 0.00 0.00 3.06
4559 4713 5.408299 CAGGTGTATTTGAGATGAAACGACA 59.592 40.000 0.00 0.00 0.00 4.35
4560 4714 5.408604 ACAGGTGTATTTGAGATGAAACGAC 59.591 40.000 0.00 0.00 0.00 4.34
4561 4715 5.547465 ACAGGTGTATTTGAGATGAAACGA 58.453 37.500 0.00 0.00 0.00 3.85
4562 4716 5.862924 ACAGGTGTATTTGAGATGAAACG 57.137 39.130 0.00 0.00 0.00 3.60
4563 4717 8.547967 TTCTACAGGTGTATTTGAGATGAAAC 57.452 34.615 0.00 0.00 0.00 2.78
4564 4718 9.567776 TTTTCTACAGGTGTATTTGAGATGAAA 57.432 29.630 0.00 0.00 0.00 2.69
4565 4719 9.219603 CTTTTCTACAGGTGTATTTGAGATGAA 57.780 33.333 0.00 0.00 0.00 2.57
4566 4720 8.593679 TCTTTTCTACAGGTGTATTTGAGATGA 58.406 33.333 0.00 0.00 0.00 2.92
4567 4721 8.777865 TCTTTTCTACAGGTGTATTTGAGATG 57.222 34.615 0.00 0.00 0.00 2.90
4569 4723 9.871238 GTATCTTTTCTACAGGTGTATTTGAGA 57.129 33.333 0.00 0.00 0.00 3.27
4570 4724 9.653287 TGTATCTTTTCTACAGGTGTATTTGAG 57.347 33.333 0.00 0.00 0.00 3.02
4571 4725 9.653287 CTGTATCTTTTCTACAGGTGTATTTGA 57.347 33.333 3.15 0.00 41.46 2.69
4572 4726 9.653287 TCTGTATCTTTTCTACAGGTGTATTTG 57.347 33.333 9.81 0.00 44.01 2.32
4575 4729 9.427821 AGATCTGTATCTTTTCTACAGGTGTAT 57.572 33.333 9.81 0.00 44.01 2.29
4576 4730 8.824756 AGATCTGTATCTTTTCTACAGGTGTA 57.175 34.615 9.81 0.00 44.01 2.90
4577 4731 7.147811 GGAGATCTGTATCTTTTCTACAGGTGT 60.148 40.741 0.00 2.53 42.73 4.16
4578 4732 7.206687 GGAGATCTGTATCTTTTCTACAGGTG 58.793 42.308 0.00 0.00 42.73 4.00
4579 4733 6.039941 CGGAGATCTGTATCTTTTCTACAGGT 59.960 42.308 0.00 3.69 42.73 4.00
4580 4734 6.442952 CGGAGATCTGTATCTTTTCTACAGG 58.557 44.000 0.00 0.00 42.73 4.00
4581 4735 5.918011 GCGGAGATCTGTATCTTTTCTACAG 59.082 44.000 0.00 4.48 42.73 2.74
4582 4736 5.221263 GGCGGAGATCTGTATCTTTTCTACA 60.221 44.000 0.00 0.00 42.73 2.74
4583 4737 5.224135 GGCGGAGATCTGTATCTTTTCTAC 58.776 45.833 0.00 0.00 42.73 2.59
4584 4738 4.281182 GGGCGGAGATCTGTATCTTTTCTA 59.719 45.833 0.00 0.00 42.73 2.10
4585 4739 3.070302 GGGCGGAGATCTGTATCTTTTCT 59.930 47.826 0.00 0.00 42.73 2.52
4586 4740 3.181465 TGGGCGGAGATCTGTATCTTTTC 60.181 47.826 0.00 0.00 42.73 2.29
4587 4741 2.771943 TGGGCGGAGATCTGTATCTTTT 59.228 45.455 0.00 0.00 42.73 2.27
4588 4742 2.398588 TGGGCGGAGATCTGTATCTTT 58.601 47.619 0.00 0.00 42.73 2.52
4589 4743 2.088104 TGGGCGGAGATCTGTATCTT 57.912 50.000 0.00 0.00 42.73 2.40
4590 4744 2.175202 GATGGGCGGAGATCTGTATCT 58.825 52.381 0.00 0.00 45.46 1.98
4591 4745 1.135257 CGATGGGCGGAGATCTGTATC 60.135 57.143 0.00 0.00 36.03 2.24
4592 4746 0.891373 CGATGGGCGGAGATCTGTAT 59.109 55.000 0.00 0.00 36.03 2.29
4593 4747 0.467474 ACGATGGGCGGAGATCTGTA 60.467 55.000 0.00 0.00 46.49 2.74
4594 4748 1.330655 AACGATGGGCGGAGATCTGT 61.331 55.000 0.00 0.00 46.49 3.41
4595 4749 0.179073 AAACGATGGGCGGAGATCTG 60.179 55.000 0.00 0.00 46.49 2.90
4596 4750 0.541863 AAAACGATGGGCGGAGATCT 59.458 50.000 0.00 0.00 46.49 2.75
4597 4751 0.657840 CAAAACGATGGGCGGAGATC 59.342 55.000 0.00 0.00 46.49 2.75
4598 4752 0.251916 TCAAAACGATGGGCGGAGAT 59.748 50.000 0.00 0.00 46.49 2.75
4599 4753 0.251916 ATCAAAACGATGGGCGGAGA 59.748 50.000 0.00 0.00 46.49 3.71
4600 4754 1.064060 GAATCAAAACGATGGGCGGAG 59.936 52.381 0.00 0.00 46.49 4.63
4601 4755 1.091537 GAATCAAAACGATGGGCGGA 58.908 50.000 0.00 0.00 46.49 5.54
4602 4756 0.100503 GGAATCAAAACGATGGGCGG 59.899 55.000 0.00 0.00 46.49 6.13
4604 4758 0.100503 CCGGAATCAAAACGATGGGC 59.899 55.000 0.00 0.00 33.40 5.36
4605 4759 0.100503 GCCGGAATCAAAACGATGGG 59.899 55.000 5.05 0.00 33.40 4.00
4606 4760 1.094785 AGCCGGAATCAAAACGATGG 58.905 50.000 5.05 0.00 33.40 3.51
4607 4761 1.737236 TCAGCCGGAATCAAAACGATG 59.263 47.619 5.05 0.00 33.40 3.84
4608 4762 2.107950 TCAGCCGGAATCAAAACGAT 57.892 45.000 5.05 0.00 35.12 3.73
4609 4763 1.885560 TTCAGCCGGAATCAAAACGA 58.114 45.000 5.05 0.00 0.00 3.85
4610 4764 2.697431 TTTCAGCCGGAATCAAAACG 57.303 45.000 5.05 0.00 34.91 3.60
4611 4765 4.809673 AGATTTTCAGCCGGAATCAAAAC 58.190 39.130 5.05 0.00 34.91 2.43
4612 4766 5.710099 AGTAGATTTTCAGCCGGAATCAAAA 59.290 36.000 5.05 4.48 34.91 2.44
4613 4767 5.123820 CAGTAGATTTTCAGCCGGAATCAAA 59.876 40.000 5.05 0.00 34.91 2.69
4614 4768 4.635765 CAGTAGATTTTCAGCCGGAATCAA 59.364 41.667 5.05 0.00 34.91 2.57
4615 4769 4.191544 CAGTAGATTTTCAGCCGGAATCA 58.808 43.478 5.05 0.00 34.91 2.57
4616 4770 3.561725 CCAGTAGATTTTCAGCCGGAATC 59.438 47.826 5.05 5.00 34.91 2.52
4617 4771 3.054361 ACCAGTAGATTTTCAGCCGGAAT 60.054 43.478 5.05 0.00 34.91 3.01
4618 4772 2.304761 ACCAGTAGATTTTCAGCCGGAA 59.695 45.455 5.05 0.00 0.00 4.30
4619 4773 1.906574 ACCAGTAGATTTTCAGCCGGA 59.093 47.619 5.05 0.00 0.00 5.14
4620 4774 2.009774 CACCAGTAGATTTTCAGCCGG 58.990 52.381 0.00 0.00 0.00 6.13
4621 4775 2.009774 CCACCAGTAGATTTTCAGCCG 58.990 52.381 0.00 0.00 0.00 5.52
4622 4776 1.745653 GCCACCAGTAGATTTTCAGCC 59.254 52.381 0.00 0.00 0.00 4.85
4623 4777 1.745653 GGCCACCAGTAGATTTTCAGC 59.254 52.381 0.00 0.00 0.00 4.26
4624 4778 2.009774 CGGCCACCAGTAGATTTTCAG 58.990 52.381 2.24 0.00 0.00 3.02
4625 4779 1.339631 CCGGCCACCAGTAGATTTTCA 60.340 52.381 2.24 0.00 0.00 2.69
4626 4780 1.339727 ACCGGCCACCAGTAGATTTTC 60.340 52.381 0.00 0.00 0.00 2.29
4627 4781 0.696501 ACCGGCCACCAGTAGATTTT 59.303 50.000 0.00 0.00 0.00 1.82
4628 4782 1.575419 TACCGGCCACCAGTAGATTT 58.425 50.000 0.00 0.00 0.00 2.17
4629 4783 1.485066 CTTACCGGCCACCAGTAGATT 59.515 52.381 0.00 0.00 0.00 2.40
4630 4784 1.120530 CTTACCGGCCACCAGTAGAT 58.879 55.000 0.00 0.00 0.00 1.98
4631 4785 0.040058 TCTTACCGGCCACCAGTAGA 59.960 55.000 0.00 0.00 0.00 2.59
4632 4786 1.120530 ATCTTACCGGCCACCAGTAG 58.879 55.000 0.00 0.00 0.00 2.57
4633 4787 2.034124 GTATCTTACCGGCCACCAGTA 58.966 52.381 0.00 0.00 0.00 2.74
4634 4788 0.828677 GTATCTTACCGGCCACCAGT 59.171 55.000 0.00 0.00 0.00 4.00
4635 4789 0.828022 TGTATCTTACCGGCCACCAG 59.172 55.000 0.00 0.00 0.00 4.00
4636 4790 0.538118 GTGTATCTTACCGGCCACCA 59.462 55.000 0.00 0.00 0.00 4.17
4637 4791 0.529119 CGTGTATCTTACCGGCCACC 60.529 60.000 0.00 0.00 0.00 4.61
4638 4792 1.149964 GCGTGTATCTTACCGGCCAC 61.150 60.000 0.00 0.00 0.00 5.01
4639 4793 1.142314 GCGTGTATCTTACCGGCCA 59.858 57.895 0.00 0.00 0.00 5.36
4640 4794 1.947642 CGCGTGTATCTTACCGGCC 60.948 63.158 0.00 0.00 0.00 6.13
4641 4795 0.029300 TACGCGTGTATCTTACCGGC 59.971 55.000 24.59 0.00 0.00 6.13
4642 4796 2.473530 TTACGCGTGTATCTTACCGG 57.526 50.000 24.59 0.00 0.00 5.28
4643 4797 3.429085 AGTTTACGCGTGTATCTTACCG 58.571 45.455 24.59 0.00 0.00 4.02
4644 4798 6.869421 TTTAGTTTACGCGTGTATCTTACC 57.131 37.500 24.59 0.00 0.00 2.85
4645 4799 8.194957 CGTATTTAGTTTACGCGTGTATCTTAC 58.805 37.037 24.59 12.43 36.40 2.34
4646 4800 7.908082 ACGTATTTAGTTTACGCGTGTATCTTA 59.092 33.333 24.59 6.12 44.73 2.10
4647 4801 6.747280 ACGTATTTAGTTTACGCGTGTATCTT 59.253 34.615 24.59 5.03 44.73 2.40
4648 4802 6.258160 ACGTATTTAGTTTACGCGTGTATCT 58.742 36.000 24.59 16.32 44.73 1.98
4649 4803 6.412072 AGACGTATTTAGTTTACGCGTGTATC 59.588 38.462 24.59 9.63 44.73 2.24
4650 4804 6.195244 CAGACGTATTTAGTTTACGCGTGTAT 59.805 38.462 24.59 7.68 44.73 2.29
4651 4805 5.507876 CAGACGTATTTAGTTTACGCGTGTA 59.492 40.000 24.59 4.34 44.73 2.90
4652 4806 4.321745 CAGACGTATTTAGTTTACGCGTGT 59.678 41.667 24.59 6.91 44.73 4.49
4653 4807 4.321745 ACAGACGTATTTAGTTTACGCGTG 59.678 41.667 24.59 2.15 44.73 5.34
4654 4808 4.475944 ACAGACGTATTTAGTTTACGCGT 58.524 39.130 19.17 19.17 44.73 6.01
4655 4809 6.722972 ATACAGACGTATTTAGTTTACGCG 57.277 37.500 3.53 3.53 44.73 6.01
4667 4821 5.461078 GCGGTGTAATCAAATACAGACGTAT 59.539 40.000 0.00 0.00 40.15 3.06
4668 4822 4.799949 GCGGTGTAATCAAATACAGACGTA 59.200 41.667 0.00 0.00 38.53 3.57
4669 4823 3.615496 GCGGTGTAATCAAATACAGACGT 59.385 43.478 0.00 0.00 38.53 4.34
4670 4824 3.615056 TGCGGTGTAATCAAATACAGACG 59.385 43.478 0.00 0.00 38.93 4.18
4671 4825 5.277345 GGATGCGGTGTAATCAAATACAGAC 60.277 44.000 0.00 0.00 36.51 3.51
4672 4826 4.814234 GGATGCGGTGTAATCAAATACAGA 59.186 41.667 0.00 0.00 36.51 3.41
4673 4827 4.574421 TGGATGCGGTGTAATCAAATACAG 59.426 41.667 0.00 0.00 36.51 2.74
4674 4828 4.518249 TGGATGCGGTGTAATCAAATACA 58.482 39.130 0.00 0.00 33.52 2.29
4675 4829 5.493133 TTGGATGCGGTGTAATCAAATAC 57.507 39.130 0.00 0.00 0.00 1.89
4676 4830 4.036262 GCTTGGATGCGGTGTAATCAAATA 59.964 41.667 0.00 0.00 0.00 1.40
4677 4831 3.181487 GCTTGGATGCGGTGTAATCAAAT 60.181 43.478 0.00 0.00 0.00 2.32
4678 4832 2.163412 GCTTGGATGCGGTGTAATCAAA 59.837 45.455 0.00 0.00 0.00 2.69
4679 4833 1.742831 GCTTGGATGCGGTGTAATCAA 59.257 47.619 0.00 0.00 0.00 2.57
4680 4834 1.378531 GCTTGGATGCGGTGTAATCA 58.621 50.000 0.00 0.00 0.00 2.57
4690 4844 2.056481 CTAAGGCTGCGCTTGGATGC 62.056 60.000 9.73 3.28 0.00 3.91
4691 4845 0.745845 ACTAAGGCTGCGCTTGGATG 60.746 55.000 9.73 0.00 0.00 3.51
4692 4846 0.830648 TACTAAGGCTGCGCTTGGAT 59.169 50.000 9.73 0.00 0.00 3.41
4693 4847 0.175760 CTACTAAGGCTGCGCTTGGA 59.824 55.000 9.73 0.00 0.00 3.53
4694 4848 0.108138 ACTACTAAGGCTGCGCTTGG 60.108 55.000 9.73 11.38 0.00 3.61
4695 4849 1.002366 CACTACTAAGGCTGCGCTTG 58.998 55.000 9.73 2.28 0.00 4.01
4696 4850 0.608640 ACACTACTAAGGCTGCGCTT 59.391 50.000 9.73 8.15 0.00 4.68
4697 4851 0.173708 GACACTACTAAGGCTGCGCT 59.826 55.000 9.73 0.00 0.00 5.92
4698 4852 0.108804 TGACACTACTAAGGCTGCGC 60.109 55.000 0.00 0.00 0.00 6.09
4699 4853 1.630148 GTGACACTACTAAGGCTGCG 58.370 55.000 0.00 0.00 0.00 5.18
4700 4854 1.630148 CGTGACACTACTAAGGCTGC 58.370 55.000 3.68 0.00 0.00 5.25
4701 4855 1.816835 TCCGTGACACTACTAAGGCTG 59.183 52.381 3.68 0.00 0.00 4.85
4702 4856 2.211250 TCCGTGACACTACTAAGGCT 57.789 50.000 3.68 0.00 0.00 4.58
4703 4857 2.426024 TCATCCGTGACACTACTAAGGC 59.574 50.000 3.68 0.00 0.00 4.35
4704 4858 4.098044 ACATCATCCGTGACACTACTAAGG 59.902 45.833 3.68 0.00 37.14 2.69
4705 4859 5.037385 CACATCATCCGTGACACTACTAAG 58.963 45.833 3.68 0.00 37.14 2.18
4706 4860 4.142249 CCACATCATCCGTGACACTACTAA 60.142 45.833 3.68 0.00 37.14 2.24
4707 4861 3.380320 CCACATCATCCGTGACACTACTA 59.620 47.826 3.68 0.00 37.14 1.82
4708 4862 2.166459 CCACATCATCCGTGACACTACT 59.834 50.000 3.68 0.00 37.14 2.57
4709 4863 2.165641 TCCACATCATCCGTGACACTAC 59.834 50.000 3.68 0.00 37.14 2.73
4710 4864 2.452505 TCCACATCATCCGTGACACTA 58.547 47.619 3.68 0.00 37.14 2.74
4711 4865 1.266178 TCCACATCATCCGTGACACT 58.734 50.000 3.68 0.00 37.14 3.55
4712 4866 2.093306 TTCCACATCATCCGTGACAC 57.907 50.000 0.00 0.00 37.14 3.67
4713 4867 2.027285 ACATTCCACATCATCCGTGACA 60.027 45.455 0.00 0.00 37.14 3.58
4714 4868 2.632377 ACATTCCACATCATCCGTGAC 58.368 47.619 0.00 0.00 37.14 3.67
4715 4869 3.348647 AACATTCCACATCATCCGTGA 57.651 42.857 0.00 0.00 36.43 4.35
4716 4870 3.691118 AGAAACATTCCACATCATCCGTG 59.309 43.478 0.00 0.00 0.00 4.94
4717 4871 3.691118 CAGAAACATTCCACATCATCCGT 59.309 43.478 0.00 0.00 0.00 4.69
4718 4872 3.488047 GCAGAAACATTCCACATCATCCG 60.488 47.826 0.00 0.00 0.00 4.18
4719 4873 3.181483 GGCAGAAACATTCCACATCATCC 60.181 47.826 0.00 0.00 0.00 3.51
4720 4874 3.444742 TGGCAGAAACATTCCACATCATC 59.555 43.478 0.00 0.00 0.00 2.92
4730 4884 6.347696 TCTTCAACAAATTGGCAGAAACATT 58.652 32.000 0.00 0.00 36.39 2.71
4733 4887 9.807649 ATATATCTTCAACAAATTGGCAGAAAC 57.192 29.630 0.00 0.00 36.39 2.78
4741 4895 9.726232 CACTGGTCATATATCTTCAACAAATTG 57.274 33.333 0.00 0.00 37.14 2.32
4749 4903 4.937201 ACGCACTGGTCATATATCTTCA 57.063 40.909 0.00 0.00 0.00 3.02
4757 4911 2.779755 ATCCAAACGCACTGGTCATA 57.220 45.000 0.00 0.00 35.30 2.15
4759 4913 1.202758 AGAATCCAAACGCACTGGTCA 60.203 47.619 0.00 0.00 35.30 4.02
4760 4914 1.523758 AGAATCCAAACGCACTGGTC 58.476 50.000 0.00 0.00 35.30 4.02
4761 4915 1.880027 GAAGAATCCAAACGCACTGGT 59.120 47.619 0.00 0.00 35.30 4.00
4762 4916 2.154462 AGAAGAATCCAAACGCACTGG 58.846 47.619 0.00 0.00 35.05 4.00
4763 4917 3.070018 AGAGAAGAATCCAAACGCACTG 58.930 45.455 0.00 0.00 0.00 3.66
4764 4918 3.409026 AGAGAAGAATCCAAACGCACT 57.591 42.857 0.00 0.00 0.00 4.40
4766 4920 5.060506 TGTTTAGAGAAGAATCCAAACGCA 58.939 37.500 0.00 0.00 0.00 5.24
4767 4921 5.607119 TGTTTAGAGAAGAATCCAAACGC 57.393 39.130 0.00 0.00 0.00 4.84
4768 4922 7.750903 GGAAATGTTTAGAGAAGAATCCAAACG 59.249 37.037 0.00 0.00 0.00 3.60
4769 4923 8.029522 GGGAAATGTTTAGAGAAGAATCCAAAC 58.970 37.037 0.00 0.00 0.00 2.93
4770 4924 7.728083 TGGGAAATGTTTAGAGAAGAATCCAAA 59.272 33.333 0.00 0.00 0.00 3.28
4771 4925 7.237982 TGGGAAATGTTTAGAGAAGAATCCAA 58.762 34.615 0.00 0.00 0.00 3.53
4784 4938 3.252215 CGCTGACAACTGGGAAATGTTTA 59.748 43.478 0.00 0.00 0.00 2.01
4802 4956 0.882042 CAAGCACTATAGGGGCGCTG 60.882 60.000 15.11 6.74 32.14 5.18
4804 4958 1.146263 ACAAGCACTATAGGGGCGC 59.854 57.895 3.68 0.00 0.00 6.53
4814 4968 2.951642 ACATAACAGCAACACAAGCACT 59.048 40.909 0.00 0.00 0.00 4.40
4834 4988 8.547967 TGATACAGTTCTTTATGGTTCAGAAC 57.452 34.615 4.52 4.52 44.61 3.01
4855 5009 3.627577 GGAAGAAAAATCGCAGCCTGATA 59.372 43.478 0.00 0.00 0.00 2.15
4875 5029 3.006430 GCCCTTTTTCATTTCCTTTCGGA 59.994 43.478 0.00 0.00 37.60 4.55
4876 5030 3.325870 GCCCTTTTTCATTTCCTTTCGG 58.674 45.455 0.00 0.00 0.00 4.30
4878 5032 4.350368 TGGCCCTTTTTCATTTCCTTTC 57.650 40.909 0.00 0.00 0.00 2.62
4882 5036 3.769739 ACTTGGCCCTTTTTCATTTCC 57.230 42.857 0.00 0.00 0.00 3.13
4894 5048 1.001393 TGAATCCGGAACTTGGCCC 60.001 57.895 9.01 0.00 0.00 5.80
4895 5049 0.322546 ACTGAATCCGGAACTTGGCC 60.323 55.000 9.01 0.00 0.00 5.36
4896 5050 1.534729 AACTGAATCCGGAACTTGGC 58.465 50.000 9.01 0.00 0.00 4.52
4897 5051 3.146066 TGAAACTGAATCCGGAACTTGG 58.854 45.455 9.01 0.31 0.00 3.61
4898 5052 6.683974 ATATGAAACTGAATCCGGAACTTG 57.316 37.500 9.01 1.90 0.00 3.16
4905 5064 6.415867 GCATTGTGAATATGAAACTGAATCCG 59.584 38.462 0.00 0.00 0.00 4.18
4940 5099 1.616865 TCCTGTTCCTGTACCAGTTCG 59.383 52.381 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.