Multiple sequence alignment - TraesCS6B01G334700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G334700 chr6B 100.000 5966 0 0 1 5966 588831264 588837229 0.000000e+00 11018.0
1 TraesCS6B01G334700 chr6B 97.536 487 12 0 5480 5966 394529946 394530432 0.000000e+00 833.0
2 TraesCS6B01G334700 chr6B 88.024 167 7 7 5198 5363 588905964 588906118 1.020000e-42 185.0
3 TraesCS6B01G334700 chr6B 95.495 111 4 1 5364 5474 588836314 588836423 6.150000e-40 176.0
4 TraesCS6B01G334700 chr6B 95.495 111 4 1 5051 5160 588836627 588836737 6.150000e-40 176.0
5 TraesCS6B01G334700 chr6B 87.500 64 7 1 3972 4034 613949810 613949873 8.290000e-09 73.1
6 TraesCS6B01G334700 chr6D 94.744 2968 107 19 2 2945 393651125 393654067 0.000000e+00 4571.0
7 TraesCS6B01G334700 chr6D 95.152 1980 80 10 3394 5363 393654571 393656544 0.000000e+00 3110.0
8 TraesCS6B01G334700 chr6D 97.331 487 13 0 5480 5966 214085613 214086099 0.000000e+00 828.0
9 TraesCS6B01G334700 chr6D 93.598 328 17 3 3025 3351 393654247 393654571 2.500000e-133 486.0
10 TraesCS6B01G334700 chr6D 87.500 64 7 1 3972 4034 416267244 416267307 8.290000e-09 73.1
11 TraesCS6B01G334700 chr6A 92.308 2366 114 31 3137 5483 540045643 540047959 0.000000e+00 3299.0
12 TraesCS6B01G334700 chr6A 92.223 2186 98 18 1 2167 540042114 540044246 0.000000e+00 3029.0
13 TraesCS6B01G334700 chr6A 90.769 455 37 4 2240 2690 540044254 540044707 2.380000e-168 603.0
14 TraesCS6B01G334700 chr6A 93.667 300 18 1 2647 2945 540044705 540045004 1.180000e-121 448.0
15 TraesCS6B01G334700 chr6A 92.195 205 13 2 5051 5255 540047841 540048042 2.720000e-73 287.0
16 TraesCS6B01G334700 chr6A 95.536 112 4 1 5363 5474 540047528 540047638 1.710000e-40 178.0
17 TraesCS6B01G334700 chr6A 89.011 91 6 4 5276 5363 540048030 540048119 6.320000e-20 110.0
18 TraesCS6B01G334700 chrUn 97.536 487 12 0 5480 5966 273322548 273322062 0.000000e+00 833.0
19 TraesCS6B01G334700 chrUn 97.331 487 13 0 5480 5966 250391612 250392098 0.000000e+00 828.0
20 TraesCS6B01G334700 chr3A 97.536 487 12 0 5480 5966 122224743 122224257 0.000000e+00 833.0
21 TraesCS6B01G334700 chr3A 87.500 64 7 1 3972 4034 105356559 105356622 8.290000e-09 73.1
22 TraesCS6B01G334700 chr7B 97.331 487 13 0 5480 5966 644481769 644482255 0.000000e+00 828.0
23 TraesCS6B01G334700 chr7A 97.331 487 13 0 5480 5966 60109244 60108758 0.000000e+00 828.0
24 TraesCS6B01G334700 chr7A 96.552 58 2 0 2158 2215 721264939 721264996 4.920000e-16 97.1
25 TraesCS6B01G334700 chr4D 97.331 487 13 0 5480 5966 123380821 123381307 0.000000e+00 828.0
26 TraesCS6B01G334700 chr4D 97.125 487 14 0 5480 5966 123591606 123592092 0.000000e+00 822.0
27 TraesCS6B01G334700 chr1A 87.324 213 24 2 4910 5119 504252651 504252439 2.150000e-59 241.0
28 TraesCS6B01G334700 chr1A 94.828 58 3 0 2158 2215 558377637 558377580 2.290000e-14 91.6
29 TraesCS6B01G334700 chr1A 88.312 77 3 2 2158 2228 66895531 66895607 2.960000e-13 87.9
30 TraesCS6B01G334700 chr1D 87.204 211 24 2 4912 5119 408251607 408251397 2.780000e-58 237.0
31 TraesCS6B01G334700 chr1D 90.647 139 11 2 5164 5301 408251388 408251251 3.670000e-42 183.0
32 TraesCS6B01G334700 chr2A 89.928 139 12 2 5164 5301 40831948 40832085 1.710000e-40 178.0
33 TraesCS6B01G334700 chr2A 97.143 70 2 0 5363 5432 40831870 40831939 1.050000e-22 119.0
34 TraesCS6B01G334700 chr2A 96.552 58 2 0 2158 2215 367831954 367832011 4.920000e-16 97.1
35 TraesCS6B01G334700 chr3D 95.000 60 2 1 2158 2217 391258107 391258049 6.370000e-15 93.5
36 TraesCS6B01G334700 chr3D 87.500 64 7 1 3972 4034 439590688 439590751 8.290000e-09 73.1
37 TraesCS6B01G334700 chr2D 98.113 53 1 0 2163 2215 186756029 186755977 6.370000e-15 93.5
38 TraesCS6B01G334700 chr2D 93.333 60 4 0 2156 2215 619321100 619321041 8.240000e-14 89.8
39 TraesCS6B01G334700 chr2D 85.714 70 9 1 3972 4040 365228402 365228333 8.290000e-09 73.1
40 TraesCS6B01G334700 chr1B 92.063 63 3 2 2154 2215 529474285 529474346 2.960000e-13 87.9
41 TraesCS6B01G334700 chr1B 85.714 70 9 1 3972 4040 559039118 559039049 8.290000e-09 73.1
42 TraesCS6B01G334700 chr5D 85.714 70 9 1 3972 4040 85500568 85500499 8.290000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G334700 chr6B 588831264 588837229 5965 False 3790.000000 11018 96.996667 1 5966 3 chr6B.!!$F4 5965
1 TraesCS6B01G334700 chr6D 393651125 393656544 5419 False 2722.333333 4571 94.498000 2 5363 3 chr6D.!!$F3 5361
2 TraesCS6B01G334700 chr6A 540042114 540048119 6005 False 1136.285714 3299 92.244143 1 5483 7 chr6A.!!$F1 5482

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
728 758 0.032540 CTTTTGCTTTCTTGGGCGCT 59.967 50.0 7.64 0.0 0.00 5.92 F
2235 2274 0.333993 ACGGAGGGAGTAGTAGGCAA 59.666 55.0 0.00 0.0 0.00 4.52 F
3484 4034 1.031571 CCCGCCTTGCAAATAGCTGA 61.032 55.0 0.00 0.0 45.94 4.26 F
3997 4563 0.173029 CGCCAGGCATTAATTGTGCA 59.827 50.0 13.30 0.0 44.25 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2437 2477 1.006337 TGGCGCAAAAAGGCATGAC 60.006 52.632 10.83 0.00 39.30 3.06 R
3653 4203 0.182775 GGGGCCGTTTGGATCATAGT 59.817 55.000 0.00 0.00 37.49 2.12 R
4603 5171 1.066573 CATCTTTCTGCCTCCTGTCGT 60.067 52.381 0.00 0.00 0.00 4.34 R
5676 6246 0.107312 AGCAACATAGCCTGGCAGAG 60.107 55.000 22.65 11.88 34.23 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 2.048409 CAGCACGCACTCTCAGCT 60.048 61.111 0.00 0.00 35.63 4.24
68 69 1.115467 CTCATACCTCCTGAACGGCT 58.885 55.000 0.00 0.00 0.00 5.52
79 80 0.173481 TGAACGGCTCAGATCTTCCG 59.827 55.000 20.23 20.23 46.61 4.30
104 106 2.287188 ACACTCGCAGCACATTTTTCTG 60.287 45.455 0.00 0.00 0.00 3.02
119 121 0.386476 TTCTGCGTCCACGTGTAACT 59.614 50.000 15.65 0.00 42.22 2.24
237 246 4.023291 ACCACATCGCCTCCATTTTTATT 58.977 39.130 0.00 0.00 0.00 1.40
429 444 0.600255 CGCGAGATAAAATCCGCCCT 60.600 55.000 0.00 0.00 42.16 5.19
626 656 2.811431 CCGCCGATATTTATTTCCTGCA 59.189 45.455 0.00 0.00 0.00 4.41
639 669 2.549064 TCCTGCATCGGTATCCATTG 57.451 50.000 0.00 0.00 0.00 2.82
655 685 5.499139 TCCATTGCCGTTGATAGATTTTC 57.501 39.130 0.00 0.00 0.00 2.29
724 754 7.547019 GGATATTTCTTCTTTTGCTTTCTTGGG 59.453 37.037 0.00 0.00 0.00 4.12
728 758 0.032540 CTTTTGCTTTCTTGGGCGCT 59.967 50.000 7.64 0.00 0.00 5.92
731 761 3.050275 GCTTTCTTGGGCGCTCGT 61.050 61.111 7.64 0.00 0.00 4.18
733 763 2.358247 TTTCTTGGGCGCTCGTCC 60.358 61.111 7.64 5.89 41.01 4.79
813 850 2.225491 TCTTGTTTTTCCGATTCTGGCG 59.775 45.455 0.00 0.00 0.00 5.69
948 985 4.080863 AGTTCGTGAATAGGAAGGCTGATT 60.081 41.667 0.00 0.00 31.92 2.57
1081 1119 2.988839 GCTGCTGGGGAATCTGGGT 61.989 63.158 0.00 0.00 0.00 4.51
1149 1187 3.211963 GCAATAGCCCCTGCCACG 61.212 66.667 0.00 0.00 38.69 4.94
1150 1188 2.516930 CAATAGCCCCTGCCACGG 60.517 66.667 0.00 0.00 38.69 4.94
1389 1427 1.548582 CCAGAAAATGAGGGGTGTGCT 60.549 52.381 0.00 0.00 0.00 4.40
1405 1443 1.532868 GTGCTGATGGTGGCGATAATC 59.467 52.381 0.00 0.00 0.00 1.75
1407 1445 1.532868 GCTGATGGTGGCGATAATCAC 59.467 52.381 0.00 0.00 0.00 3.06
1419 1457 4.130118 GCGATAATCACAAGGGAGTTCAT 58.870 43.478 0.00 0.00 0.00 2.57
1713 1751 4.178545 ACTTAATCAATTGTGCAGGCAC 57.821 40.909 17.11 17.11 46.33 5.01
1905 1943 4.777463 AGTTGGCGGTTTATGCTTATAGT 58.223 39.130 0.00 0.00 0.00 2.12
2129 2168 6.491383 ACAAATACTAGGACAGAGTAGGACA 58.509 40.000 0.00 0.00 33.03 4.02
2142 2181 9.469807 GACAGAGTAGGACATATAGTTTGATTG 57.530 37.037 0.00 0.00 0.00 2.67
2172 2211 7.249147 CGGAAGTATCATAAATACTACCTCCG 58.751 42.308 16.32 16.32 41.74 4.63
2235 2274 0.333993 ACGGAGGGAGTAGTAGGCAA 59.666 55.000 0.00 0.00 0.00 4.52
2236 2275 1.063114 ACGGAGGGAGTAGTAGGCAAT 60.063 52.381 0.00 0.00 0.00 3.56
2319 2358 9.535878 TTTCGTTAAAAGAAAATGCCAGTTTAT 57.464 25.926 0.00 0.00 35.00 1.40
2335 2374 5.278561 CCAGTTTATTGGCGGTTTCTTTGTA 60.279 40.000 0.00 0.00 0.00 2.41
2396 2436 3.728845 AGTACTGTGTCGTTTCTGCATT 58.271 40.909 0.00 0.00 0.00 3.56
2400 2440 3.565482 ACTGTGTCGTTTCTGCATTTCAT 59.435 39.130 0.00 0.00 0.00 2.57
2498 2538 6.973474 GGTAGTTAGTAGTGCTGACATTACAG 59.027 42.308 5.95 0.00 40.47 2.74
2570 2612 2.803956 ACCGACTCAACATAGGTCTCA 58.196 47.619 0.00 0.00 0.00 3.27
2786 2871 9.521841 ACTATCTTCTATTCGACATGAGGATAA 57.478 33.333 0.00 0.00 30.78 1.75
2797 2882 9.463443 TTCGACATGAGGATAATATATTATGCG 57.537 33.333 23.41 15.31 43.28 4.73
2921 3007 2.224426 ACACAAACCGGACTAGAATGCA 60.224 45.455 9.46 0.00 0.00 3.96
2945 3031 6.579666 AAGAAAATTTAGCTGTCAGATGCA 57.420 33.333 3.32 0.00 0.00 3.96
2946 3032 6.770746 AGAAAATTTAGCTGTCAGATGCAT 57.229 33.333 0.00 0.00 0.00 3.96
2983 3108 3.689347 AGTGAGCACCTGAATTTGCATA 58.311 40.909 2.88 0.00 41.48 3.14
3009 3137 5.388654 AGGAAGAATCATGTCCTGTTTGTT 58.611 37.500 1.16 0.00 40.37 2.83
3057 3244 4.349636 TCTGGAGTTTTGTGTCCCATAAGA 59.650 41.667 0.00 0.00 31.04 2.10
3062 3249 4.766891 AGTTTTGTGTCCCATAAGACCATG 59.233 41.667 0.00 0.00 35.83 3.66
3064 3251 1.632920 TGTGTCCCATAAGACCATGCA 59.367 47.619 0.00 0.00 35.83 3.96
3100 3287 3.119637 CCGAACAATTAGCCGGTCAAATT 60.120 43.478 1.90 4.13 37.40 1.82
3135 3322 8.734386 ACTGATTTACTGGTCAAAGATCAATTC 58.266 33.333 0.00 0.00 0.00 2.17
3307 3841 1.338200 GCAGTGTGTCTCCCTTTCGAT 60.338 52.381 0.00 0.00 0.00 3.59
3311 3845 3.118956 AGTGTGTCTCCCTTTCGATCATC 60.119 47.826 0.00 0.00 0.00 2.92
3312 3846 2.831526 TGTGTCTCCCTTTCGATCATCA 59.168 45.455 0.00 0.00 0.00 3.07
3313 3847 3.452264 TGTGTCTCCCTTTCGATCATCAT 59.548 43.478 0.00 0.00 0.00 2.45
3462 4012 2.354729 CTGTTTGGATCCCGCCCA 59.645 61.111 9.90 0.00 0.00 5.36
3464 4014 2.034999 GTTTGGATCCCGCCCACA 59.965 61.111 9.90 0.00 32.58 4.17
3484 4034 1.031571 CCCGCCTTGCAAATAGCTGA 61.032 55.000 0.00 0.00 45.94 4.26
3567 4117 3.431922 CTGAACTGCCAGCCAATATTG 57.568 47.619 8.58 8.58 0.00 1.90
3607 4157 1.832167 GCTTCCAACCAAGTGGCCA 60.832 57.895 0.00 0.00 38.68 5.36
3649 4199 2.727544 TTTTTGGTGCGGCAGCTC 59.272 55.556 29.51 6.35 45.42 4.09
3650 4200 1.827789 TTTTTGGTGCGGCAGCTCT 60.828 52.632 29.51 0.00 45.42 4.09
3651 4201 1.391157 TTTTTGGTGCGGCAGCTCTT 61.391 50.000 29.51 0.00 45.42 2.85
3652 4202 2.074230 TTTTGGTGCGGCAGCTCTTG 62.074 55.000 29.51 0.00 45.42 3.02
3653 4203 2.956799 TTTGGTGCGGCAGCTCTTGA 62.957 55.000 29.51 9.25 45.42 3.02
3679 4239 2.312424 TCCAAACGGCCCCTTAAATT 57.688 45.000 0.00 0.00 0.00 1.82
3943 4509 8.903820 GGTAAGCATTATTTATTTCAGTCCTGT 58.096 33.333 0.00 0.00 30.46 4.00
3997 4563 0.173029 CGCCAGGCATTAATTGTGCA 59.827 50.000 13.30 0.00 44.25 4.57
4075 4641 1.962306 GCGTTCCGTTGTGGCCTAA 60.962 57.895 3.32 0.00 37.80 2.69
4093 4659 1.289160 AAGGCCTAAGGATCTGTGCA 58.711 50.000 5.16 0.00 0.00 4.57
4227 4793 4.547406 ACAAAGCTGAACTTTTCGGTAC 57.453 40.909 0.00 0.00 46.73 3.34
4251 4818 6.089417 ACGTTTTTCTCTCTTGTTTTTGCTTG 59.911 34.615 0.00 0.00 0.00 4.01
4293 4860 7.134362 ACAAGTGGATCTCATGAGTCAATAT 57.866 36.000 21.92 8.04 0.00 1.28
4322 4889 5.931146 CCAGATTTCGGAATATGAGAAGGAG 59.069 44.000 12.71 0.00 36.76 3.69
4337 4904 1.227380 GGAGCTGGCGGACATACAG 60.227 63.158 0.00 0.00 35.40 2.74
4420 4987 5.076182 TCAGACTCTTCAGATCAGTGTTCT 58.924 41.667 0.00 0.00 0.00 3.01
4437 5004 6.751425 CAGTGTTCTAGTGAGATGATGACTTC 59.249 42.308 0.00 0.00 30.94 3.01
4519 5086 0.608640 AGAGGAGTTACAAGGTGGCG 59.391 55.000 0.00 0.00 0.00 5.69
4527 5094 0.606604 TACAAGGTGGCGTCTCCTTC 59.393 55.000 19.97 0.00 42.91 3.46
4732 5301 2.716217 CCCCCTTGAACTCTCATCAAC 58.284 52.381 0.00 0.00 33.47 3.18
4742 5311 5.013079 TGAACTCTCATCAACAGTTACCCAT 59.987 40.000 0.00 0.00 30.32 4.00
4747 5316 7.040409 ACTCTCATCAACAGTTACCCATTTTTC 60.040 37.037 0.00 0.00 0.00 2.29
4777 5346 4.996788 AGACAGCATCCCATTTCAATTC 57.003 40.909 0.00 0.00 0.00 2.17
5007 5576 2.079170 TGAACAGATTTGGTTGGCCA 57.921 45.000 0.00 0.00 44.38 5.36
5065 5634 1.065491 TGGTCGCAGCCTGTCATTATT 60.065 47.619 0.00 0.00 0.00 1.40
5196 5765 3.186613 GTGTTTGTAGGCTAGAGTTGCAC 59.813 47.826 0.00 0.00 0.00 4.57
5391 5961 5.280654 TGTCATTATCTGCTGCTGTATGA 57.719 39.130 0.00 8.90 0.00 2.15
5400 5970 4.161001 TCTGCTGCTGTATGATTCTTCAGA 59.839 41.667 0.00 0.00 34.73 3.27
5432 6002 6.799926 AGTTCTTTCAGAGAGAATTTCAGC 57.200 37.500 6.67 0.00 35.74 4.26
5468 6038 6.978080 GCTTTTGTGTCCAGAACAAGATTTTA 59.022 34.615 0.00 0.00 40.31 1.52
5469 6039 7.491048 GCTTTTGTGTCCAGAACAAGATTTTAA 59.509 33.333 0.00 0.00 40.31 1.52
5474 6044 7.721842 TGTGTCCAGAACAAGATTTTAACCATA 59.278 33.333 0.00 0.00 40.31 2.74
5484 6054 9.420118 ACAAGATTTTAACCATATATTGCTGGA 57.580 29.630 5.85 0.00 36.35 3.86
5493 6063 7.756395 ACCATATATTGCTGGATTTCTTCTG 57.244 36.000 5.85 0.00 36.35 3.02
5494 6064 7.293073 ACCATATATTGCTGGATTTCTTCTGT 58.707 34.615 5.85 0.00 36.35 3.41
5495 6065 7.230108 ACCATATATTGCTGGATTTCTTCTGTG 59.770 37.037 5.85 0.00 36.35 3.66
5496 6066 7.309012 CCATATATTGCTGGATTTCTTCTGTGG 60.309 40.741 0.00 0.00 34.24 4.17
5497 6067 1.538047 TGCTGGATTTCTTCTGTGGC 58.462 50.000 0.00 0.00 0.00 5.01
5498 6068 1.074405 TGCTGGATTTCTTCTGTGGCT 59.926 47.619 0.00 0.00 0.00 4.75
5500 6070 2.163211 GCTGGATTTCTTCTGTGGCTTC 59.837 50.000 0.00 0.00 0.00 3.86
5501 6071 3.683802 CTGGATTTCTTCTGTGGCTTCT 58.316 45.455 0.00 0.00 0.00 2.85
5502 6072 4.077822 CTGGATTTCTTCTGTGGCTTCTT 58.922 43.478 0.00 0.00 0.00 2.52
5503 6073 4.473444 TGGATTTCTTCTGTGGCTTCTTT 58.527 39.130 0.00 0.00 0.00 2.52
5504 6074 5.630121 TGGATTTCTTCTGTGGCTTCTTTA 58.370 37.500 0.00 0.00 0.00 1.85
5507 6077 6.151817 GGATTTCTTCTGTGGCTTCTTTATGT 59.848 38.462 0.00 0.00 0.00 2.29
5508 6078 6.959639 TTTCTTCTGTGGCTTCTTTATGTT 57.040 33.333 0.00 0.00 0.00 2.71
5509 6079 6.959639 TTCTTCTGTGGCTTCTTTATGTTT 57.040 33.333 0.00 0.00 0.00 2.83
5510 6080 8.458573 TTTCTTCTGTGGCTTCTTTATGTTTA 57.541 30.769 0.00 0.00 0.00 2.01
5511 6081 7.435068 TCTTCTGTGGCTTCTTTATGTTTAC 57.565 36.000 0.00 0.00 0.00 2.01
5512 6082 6.430000 TCTTCTGTGGCTTCTTTATGTTTACC 59.570 38.462 0.00 0.00 0.00 2.85
5513 6083 5.007682 TCTGTGGCTTCTTTATGTTTACCC 58.992 41.667 0.00 0.00 0.00 3.69
5515 6085 4.521256 TGTGGCTTCTTTATGTTTACCCAC 59.479 41.667 0.00 0.00 40.33 4.61
5516 6086 3.754323 TGGCTTCTTTATGTTTACCCACG 59.246 43.478 0.00 0.00 0.00 4.94
5517 6087 3.427098 GGCTTCTTTATGTTTACCCACGC 60.427 47.826 0.00 0.00 0.00 5.34
5518 6088 3.427098 GCTTCTTTATGTTTACCCACGCC 60.427 47.826 0.00 0.00 0.00 5.68
5519 6089 2.348660 TCTTTATGTTTACCCACGCCG 58.651 47.619 0.00 0.00 0.00 6.46
5520 6090 0.803740 TTTATGTTTACCCACGCCGC 59.196 50.000 0.00 0.00 0.00 6.53
5530 6100 3.192230 CACGCCGCGGCTATTCAA 61.192 61.111 43.60 0.00 39.32 2.69
5531 6101 2.203015 ACGCCGCGGCTATTCAAT 60.203 55.556 43.60 19.53 39.32 2.57
5532 6102 1.068417 ACGCCGCGGCTATTCAATA 59.932 52.632 43.60 0.00 39.32 1.90
5534 6104 0.584396 CGCCGCGGCTATTCAATAAA 59.416 50.000 43.60 0.00 39.32 1.40
5535 6105 1.003331 CGCCGCGGCTATTCAATAAAA 60.003 47.619 43.60 0.00 39.32 1.52
5536 6106 2.650608 GCCGCGGCTATTCAATAAAAG 58.349 47.619 41.71 2.82 38.26 2.27
5537 6107 2.604614 GCCGCGGCTATTCAATAAAAGG 60.605 50.000 41.71 2.38 38.26 3.11
5538 6108 2.031157 CCGCGGCTATTCAATAAAAGGG 60.031 50.000 14.67 0.00 0.00 3.95
5539 6109 2.616842 CGCGGCTATTCAATAAAAGGGT 59.383 45.455 0.00 0.00 0.00 4.34
5540 6110 3.066203 CGCGGCTATTCAATAAAAGGGTT 59.934 43.478 0.00 0.00 0.00 4.11
5541 6111 4.359706 GCGGCTATTCAATAAAAGGGTTG 58.640 43.478 0.00 0.00 0.00 3.77
5542 6112 4.736464 GCGGCTATTCAATAAAAGGGTTGG 60.736 45.833 0.00 0.00 0.00 3.77
5543 6113 4.401202 CGGCTATTCAATAAAAGGGTTGGT 59.599 41.667 0.00 0.00 0.00 3.67
5544 6114 5.591067 CGGCTATTCAATAAAAGGGTTGGTA 59.409 40.000 0.00 0.00 0.00 3.25
5546 6116 6.605995 GGCTATTCAATAAAAGGGTTGGTAGT 59.394 38.462 0.00 0.00 0.00 2.73
5547 6117 7.123697 GGCTATTCAATAAAAGGGTTGGTAGTT 59.876 37.037 0.00 0.00 0.00 2.24
5551 6121 8.999905 TTCAATAAAAGGGTTGGTAGTTAGTT 57.000 30.769 0.00 0.00 0.00 2.24
5552 6122 8.398878 TCAATAAAAGGGTTGGTAGTTAGTTG 57.601 34.615 0.00 0.00 0.00 3.16
5553 6123 6.829229 ATAAAAGGGTTGGTAGTTAGTTGC 57.171 37.500 0.00 0.00 0.00 4.17
5554 6124 2.873094 AGGGTTGGTAGTTAGTTGCC 57.127 50.000 0.00 0.00 0.00 4.52
5556 6126 2.305052 AGGGTTGGTAGTTAGTTGCCTC 59.695 50.000 0.00 0.00 0.00 4.70
5557 6127 2.039348 GGGTTGGTAGTTAGTTGCCTCA 59.961 50.000 0.00 0.00 0.00 3.86
5558 6128 3.072211 GGTTGGTAGTTAGTTGCCTCAC 58.928 50.000 0.00 0.00 0.00 3.51
5559 6129 3.072211 GTTGGTAGTTAGTTGCCTCACC 58.928 50.000 0.00 0.00 0.00 4.02
5563 6133 3.710165 GGTAGTTAGTTGCCTCACCCTAT 59.290 47.826 0.00 0.00 0.00 2.57
5564 6134 4.163649 GGTAGTTAGTTGCCTCACCCTATT 59.836 45.833 0.00 0.00 0.00 1.73
5565 6135 4.222124 AGTTAGTTGCCTCACCCTATTG 57.778 45.455 0.00 0.00 0.00 1.90
5580 6150 5.545063 CCCTATTGGTTGTTGGTTTTCTT 57.455 39.130 0.00 0.00 0.00 2.52
5581 6151 5.924356 CCCTATTGGTTGTTGGTTTTCTTT 58.076 37.500 0.00 0.00 0.00 2.52
5583 6153 6.183360 CCCTATTGGTTGTTGGTTTTCTTTCT 60.183 38.462 0.00 0.00 0.00 2.52
5584 6154 6.923508 CCTATTGGTTGTTGGTTTTCTTTCTC 59.076 38.462 0.00 0.00 0.00 2.87
5587 6157 4.401202 TGGTTGTTGGTTTTCTTTCTCCTC 59.599 41.667 0.00 0.00 0.00 3.71
5588 6158 4.645136 GGTTGTTGGTTTTCTTTCTCCTCT 59.355 41.667 0.00 0.00 0.00 3.69
5589 6159 5.450550 GGTTGTTGGTTTTCTTTCTCCTCTG 60.451 44.000 0.00 0.00 0.00 3.35
5590 6160 3.632145 TGTTGGTTTTCTTTCTCCTCTGC 59.368 43.478 0.00 0.00 0.00 4.26
5591 6161 2.494059 TGGTTTTCTTTCTCCTCTGCG 58.506 47.619 0.00 0.00 0.00 5.18
5592 6162 2.158813 TGGTTTTCTTTCTCCTCTGCGT 60.159 45.455 0.00 0.00 0.00 5.24
5593 6163 2.879026 GGTTTTCTTTCTCCTCTGCGTT 59.121 45.455 0.00 0.00 0.00 4.84
5594 6164 3.058846 GGTTTTCTTTCTCCTCTGCGTTC 60.059 47.826 0.00 0.00 0.00 3.95
5595 6165 2.065993 TTCTTTCTCCTCTGCGTTCG 57.934 50.000 0.00 0.00 0.00 3.95
5596 6166 0.959553 TCTTTCTCCTCTGCGTTCGT 59.040 50.000 0.00 0.00 0.00 3.85
5597 6167 1.063806 CTTTCTCCTCTGCGTTCGTG 58.936 55.000 0.00 0.00 0.00 4.35
5598 6168 0.671796 TTTCTCCTCTGCGTTCGTGA 59.328 50.000 0.00 0.00 0.00 4.35
5599 6169 0.671796 TTCTCCTCTGCGTTCGTGAA 59.328 50.000 0.00 0.00 0.00 3.18
5600 6170 0.671796 TCTCCTCTGCGTTCGTGAAA 59.328 50.000 0.00 0.00 0.00 2.69
5601 6171 1.067974 TCTCCTCTGCGTTCGTGAAAA 59.932 47.619 0.00 0.00 0.00 2.29
5602 6172 1.457303 CTCCTCTGCGTTCGTGAAAAG 59.543 52.381 0.00 0.00 0.00 2.27
5605 6175 2.058798 CTCTGCGTTCGTGAAAAGCTA 58.941 47.619 11.02 2.00 42.15 3.32
5606 6176 2.058798 TCTGCGTTCGTGAAAAGCTAG 58.941 47.619 11.02 0.00 42.15 3.42
5607 6177 1.792949 CTGCGTTCGTGAAAAGCTAGT 59.207 47.619 11.02 0.00 42.15 2.57
5608 6178 2.984471 CTGCGTTCGTGAAAAGCTAGTA 59.016 45.455 11.02 0.00 42.15 1.82
5610 6180 3.366724 TGCGTTCGTGAAAAGCTAGTATG 59.633 43.478 11.02 0.00 42.15 2.39
5611 6181 3.781280 GCGTTCGTGAAAAGCTAGTATGC 60.781 47.826 0.00 0.00 39.04 3.14
5612 6182 3.612860 CGTTCGTGAAAAGCTAGTATGCT 59.387 43.478 0.00 0.00 46.40 3.79
5613 6183 4.259451 CGTTCGTGAAAAGCTAGTATGCTC 60.259 45.833 0.00 0.00 43.24 4.26
5614 6184 3.435566 TCGTGAAAAGCTAGTATGCTCG 58.564 45.455 0.00 0.00 43.24 5.03
5615 6185 2.034507 CGTGAAAAGCTAGTATGCTCGC 60.035 50.000 0.00 0.00 43.24 5.03
5616 6186 2.034507 GTGAAAAGCTAGTATGCTCGCG 60.035 50.000 0.00 0.00 43.24 5.87
5617 6187 1.523095 GAAAAGCTAGTATGCTCGCGG 59.477 52.381 6.13 0.00 43.24 6.46
5618 6188 0.744874 AAAGCTAGTATGCTCGCGGA 59.255 50.000 6.13 0.00 43.24 5.54
5620 6190 0.744874 AGCTAGTATGCTCGCGGAAA 59.255 50.000 6.13 0.00 39.34 3.13
5622 6192 1.721926 GCTAGTATGCTCGCGGAAATC 59.278 52.381 6.13 0.00 0.00 2.17
5623 6193 2.862530 GCTAGTATGCTCGCGGAAATCA 60.863 50.000 6.13 0.00 0.00 2.57
5624 6194 2.533266 AGTATGCTCGCGGAAATCAT 57.467 45.000 6.13 5.55 0.00 2.45
5626 6196 2.036475 AGTATGCTCGCGGAAATCATCT 59.964 45.455 6.13 0.93 0.00 2.90
5627 6197 2.820059 ATGCTCGCGGAAATCATCTA 57.180 45.000 6.13 0.00 0.00 1.98
5628 6198 2.595124 TGCTCGCGGAAATCATCTAA 57.405 45.000 6.13 0.00 0.00 2.10
5630 6200 2.866156 TGCTCGCGGAAATCATCTAAAG 59.134 45.455 6.13 0.00 0.00 1.85
5631 6201 2.221981 GCTCGCGGAAATCATCTAAAGG 59.778 50.000 6.13 0.00 0.00 3.11
5632 6202 3.717707 CTCGCGGAAATCATCTAAAGGA 58.282 45.455 6.13 0.00 0.00 3.36
5633 6203 4.119862 CTCGCGGAAATCATCTAAAGGAA 58.880 43.478 6.13 0.00 0.00 3.36
5635 6205 4.331717 TCGCGGAAATCATCTAAAGGAAAC 59.668 41.667 6.13 0.00 0.00 2.78
5639 6209 6.539103 GCGGAAATCATCTAAAGGAAACTACT 59.461 38.462 0.00 0.00 42.68 2.57
5642 6212 8.184848 GGAAATCATCTAAAGGAAACTACTTGC 58.815 37.037 0.00 0.00 42.68 4.01
5643 6213 8.870075 AAATCATCTAAAGGAAACTACTTGCT 57.130 30.769 0.00 0.00 42.68 3.91
5644 6214 9.959721 AAATCATCTAAAGGAAACTACTTGCTA 57.040 29.630 0.00 0.00 42.68 3.49
5645 6215 9.959721 AATCATCTAAAGGAAACTACTTGCTAA 57.040 29.630 0.00 0.00 42.68 3.09
5646 6216 8.773404 TCATCTAAAGGAAACTACTTGCTAAC 57.227 34.615 0.00 0.00 42.68 2.34
5647 6217 8.594550 TCATCTAAAGGAAACTACTTGCTAACT 58.405 33.333 0.00 0.00 42.68 2.24
5648 6218 8.874816 CATCTAAAGGAAACTACTTGCTAACTC 58.125 37.037 0.00 0.00 42.68 3.01
5649 6219 7.088905 TCTAAAGGAAACTACTTGCTAACTCG 58.911 38.462 0.00 0.00 42.68 4.18
5650 6220 3.586892 AGGAAACTACTTGCTAACTCGC 58.413 45.455 0.00 0.00 40.61 5.03
5651 6221 2.671888 GGAAACTACTTGCTAACTCGCC 59.328 50.000 0.00 0.00 0.00 5.54
5652 6222 3.323243 GAAACTACTTGCTAACTCGCCA 58.677 45.455 0.00 0.00 0.00 5.69
5653 6223 3.396260 AACTACTTGCTAACTCGCCAA 57.604 42.857 0.00 0.00 0.00 4.52
5654 6224 2.685100 ACTACTTGCTAACTCGCCAAC 58.315 47.619 0.00 0.00 0.00 3.77
5655 6225 2.036733 ACTACTTGCTAACTCGCCAACA 59.963 45.455 0.00 0.00 0.00 3.33
5656 6226 1.961793 ACTTGCTAACTCGCCAACAA 58.038 45.000 0.00 0.00 0.00 2.83
5657 6227 1.873591 ACTTGCTAACTCGCCAACAAG 59.126 47.619 0.00 0.00 40.19 3.16
5658 6228 2.143122 CTTGCTAACTCGCCAACAAGA 58.857 47.619 0.00 0.00 37.32 3.02
5659 6229 1.508632 TGCTAACTCGCCAACAAGAC 58.491 50.000 0.00 0.00 0.00 3.01
5660 6230 0.438830 GCTAACTCGCCAACAAGACG 59.561 55.000 0.00 0.00 0.00 4.18
5661 6231 1.068474 CTAACTCGCCAACAAGACGG 58.932 55.000 0.00 0.00 0.00 4.79
5662 6232 0.675083 TAACTCGCCAACAAGACGGA 59.325 50.000 0.00 0.00 0.00 4.69
5663 6233 0.878961 AACTCGCCAACAAGACGGAC 60.879 55.000 0.00 0.00 0.00 4.79
5664 6234 1.006102 CTCGCCAACAAGACGGACT 60.006 57.895 0.00 0.00 0.00 3.85
5665 6235 0.600255 CTCGCCAACAAGACGGACTT 60.600 55.000 0.00 0.00 39.70 3.01
5666 6236 0.599204 TCGCCAACAAGACGGACTTC 60.599 55.000 0.00 0.00 36.61 3.01
5667 6237 0.600255 CGCCAACAAGACGGACTTCT 60.600 55.000 0.00 0.00 36.61 2.85
5668 6238 1.594331 GCCAACAAGACGGACTTCTT 58.406 50.000 0.00 0.00 36.61 2.52
5669 6239 1.531578 GCCAACAAGACGGACTTCTTC 59.468 52.381 0.00 0.00 36.61 2.87
5670 6240 2.143925 CCAACAAGACGGACTTCTTCC 58.856 52.381 0.00 0.00 41.75 3.46
5671 6241 2.224305 CCAACAAGACGGACTTCTTCCT 60.224 50.000 0.00 0.00 43.25 3.36
5672 6242 3.060602 CAACAAGACGGACTTCTTCCTC 58.939 50.000 0.00 0.00 43.25 3.71
5673 6243 2.599677 ACAAGACGGACTTCTTCCTCT 58.400 47.619 0.00 0.00 43.25 3.69
5674 6244 2.297597 ACAAGACGGACTTCTTCCTCTG 59.702 50.000 0.00 0.00 43.25 3.35
5675 6245 1.551452 AGACGGACTTCTTCCTCTGG 58.449 55.000 0.00 0.00 43.25 3.86
5676 6246 0.108567 GACGGACTTCTTCCTCTGGC 60.109 60.000 0.00 0.00 43.25 4.85
5677 6247 0.543174 ACGGACTTCTTCCTCTGGCT 60.543 55.000 0.00 0.00 43.25 4.75
5678 6248 0.174617 CGGACTTCTTCCTCTGGCTC 59.825 60.000 0.00 0.00 43.25 4.70
5679 6249 1.567357 GGACTTCTTCCTCTGGCTCT 58.433 55.000 0.00 0.00 41.95 4.09
5680 6250 1.206849 GGACTTCTTCCTCTGGCTCTG 59.793 57.143 0.00 0.00 41.95 3.35
5681 6251 0.612744 ACTTCTTCCTCTGGCTCTGC 59.387 55.000 0.00 0.00 0.00 4.26
5692 6262 4.972875 GCTCTGCCAGGCTATGTT 57.027 55.556 14.15 0.00 0.00 2.71
5693 6263 2.401967 GCTCTGCCAGGCTATGTTG 58.598 57.895 14.15 0.00 0.00 3.33
5694 6264 1.722636 GCTCTGCCAGGCTATGTTGC 61.723 60.000 14.15 4.92 0.00 4.17
5695 6265 0.107312 CTCTGCCAGGCTATGTTGCT 60.107 55.000 14.15 0.00 0.00 3.91
5696 6266 0.107508 TCTGCCAGGCTATGTTGCTC 60.108 55.000 14.15 0.00 0.00 4.26
5697 6267 1.434622 CTGCCAGGCTATGTTGCTCG 61.435 60.000 14.15 0.00 0.00 5.03
5698 6268 2.828128 GCCAGGCTATGTTGCTCGC 61.828 63.158 3.29 0.00 0.00 5.03
5699 6269 2.182842 CCAGGCTATGTTGCTCGCC 61.183 63.158 0.00 0.00 42.79 5.54
5702 6272 3.379650 GGCTATGTTGCTCGCCTAA 57.620 52.632 0.00 0.00 39.42 2.69
5703 6273 1.663695 GGCTATGTTGCTCGCCTAAA 58.336 50.000 0.00 0.00 39.42 1.85
5704 6274 2.222027 GGCTATGTTGCTCGCCTAAAT 58.778 47.619 0.00 0.00 39.42 1.40
5705 6275 2.224314 GGCTATGTTGCTCGCCTAAATC 59.776 50.000 0.00 0.00 39.42 2.17
5706 6276 2.096713 GCTATGTTGCTCGCCTAAATCG 60.097 50.000 0.00 0.00 0.00 3.34
5707 6277 1.299541 ATGTTGCTCGCCTAAATCGG 58.700 50.000 0.00 0.00 0.00 4.18
5708 6278 1.352056 GTTGCTCGCCTAAATCGGC 59.648 57.895 0.00 0.00 46.68 5.54
5721 6291 6.867662 CCTAAATCGGCATCAATAACTTCT 57.132 37.500 0.00 0.00 0.00 2.85
5722 6292 7.962964 CCTAAATCGGCATCAATAACTTCTA 57.037 36.000 0.00 0.00 0.00 2.10
5723 6293 8.553459 CCTAAATCGGCATCAATAACTTCTAT 57.447 34.615 0.00 0.00 0.00 1.98
5724 6294 8.660373 CCTAAATCGGCATCAATAACTTCTATC 58.340 37.037 0.00 0.00 0.00 2.08
5725 6295 6.712241 AATCGGCATCAATAACTTCTATCG 57.288 37.500 0.00 0.00 0.00 2.92
5726 6296 5.196341 TCGGCATCAATAACTTCTATCGT 57.804 39.130 0.00 0.00 0.00 3.73
5727 6297 6.321848 TCGGCATCAATAACTTCTATCGTA 57.678 37.500 0.00 0.00 0.00 3.43
5728 6298 6.147581 TCGGCATCAATAACTTCTATCGTAC 58.852 40.000 0.00 0.00 0.00 3.67
5729 6299 6.016527 TCGGCATCAATAACTTCTATCGTACT 60.017 38.462 0.00 0.00 0.00 2.73
5730 6300 6.641314 CGGCATCAATAACTTCTATCGTACTT 59.359 38.462 0.00 0.00 0.00 2.24
5731 6301 7.148950 CGGCATCAATAACTTCTATCGTACTTC 60.149 40.741 0.00 0.00 0.00 3.01
5732 6302 7.148950 GGCATCAATAACTTCTATCGTACTTCG 60.149 40.741 0.00 0.00 41.41 3.79
5743 6313 3.759527 TCGTACTTCGACCTCTCATTG 57.240 47.619 0.00 0.00 44.01 2.82
5744 6314 2.422479 TCGTACTTCGACCTCTCATTGG 59.578 50.000 0.00 0.00 44.01 3.16
5745 6315 2.422479 CGTACTTCGACCTCTCATTGGA 59.578 50.000 0.00 0.00 42.86 3.53
5746 6316 3.119602 CGTACTTCGACCTCTCATTGGAA 60.120 47.826 0.00 0.00 42.86 3.53
5747 6317 4.440250 CGTACTTCGACCTCTCATTGGAAT 60.440 45.833 0.00 0.00 42.86 3.01
5748 6318 3.866651 ACTTCGACCTCTCATTGGAATG 58.133 45.455 0.00 0.00 37.75 2.67
5749 6319 3.515502 ACTTCGACCTCTCATTGGAATGA 59.484 43.478 2.19 2.19 42.78 2.57
5750 6320 3.526931 TCGACCTCTCATTGGAATGAC 57.473 47.619 0.00 0.00 40.32 3.06
5751 6321 2.831526 TCGACCTCTCATTGGAATGACA 59.168 45.455 0.00 0.00 40.32 3.58
5752 6322 3.260632 TCGACCTCTCATTGGAATGACAA 59.739 43.478 0.00 0.00 40.32 3.18
5753 6323 3.620374 CGACCTCTCATTGGAATGACAAG 59.380 47.826 0.00 0.34 40.32 3.16
5754 6324 4.583871 GACCTCTCATTGGAATGACAAGT 58.416 43.478 0.00 0.00 40.32 3.16
5755 6325 4.990526 ACCTCTCATTGGAATGACAAGTT 58.009 39.130 0.00 0.00 40.32 2.66
5756 6326 4.763793 ACCTCTCATTGGAATGACAAGTTG 59.236 41.667 0.00 0.00 40.32 3.16
5757 6327 4.157289 CCTCTCATTGGAATGACAAGTTGG 59.843 45.833 7.96 0.00 40.32 3.77
5758 6328 3.507233 TCTCATTGGAATGACAAGTTGGC 59.493 43.478 7.96 4.40 40.32 4.52
5759 6329 3.499338 TCATTGGAATGACAAGTTGGCT 58.501 40.909 10.75 0.00 40.32 4.75
5760 6330 4.661222 TCATTGGAATGACAAGTTGGCTA 58.339 39.130 10.75 0.00 40.32 3.93
5761 6331 4.458989 TCATTGGAATGACAAGTTGGCTAC 59.541 41.667 10.75 1.24 40.32 3.58
5762 6332 3.500448 TGGAATGACAAGTTGGCTACA 57.500 42.857 10.75 0.00 0.00 2.74
5763 6333 3.826524 TGGAATGACAAGTTGGCTACAA 58.173 40.909 10.75 0.00 0.00 2.41
5764 6334 7.280031 CATTGGAATGACAAGTTGGCTACAAC 61.280 42.308 10.75 2.55 46.12 3.32
5776 6346 6.716898 GTTGGCTACAACGAACTAATAAGT 57.283 37.500 0.00 0.00 46.50 2.24
5777 6347 7.125536 GTTGGCTACAACGAACTAATAAGTT 57.874 36.000 0.00 0.00 46.31 2.66
5778 6348 7.578852 GTTGGCTACAACGAACTAATAAGTTT 58.421 34.615 0.00 0.00 45.07 2.66
5779 6349 7.355332 TGGCTACAACGAACTAATAAGTTTC 57.645 36.000 0.00 0.00 46.09 2.78
5780 6350 7.156673 TGGCTACAACGAACTAATAAGTTTCT 58.843 34.615 0.00 0.00 46.09 2.52
5781 6351 7.330208 TGGCTACAACGAACTAATAAGTTTCTC 59.670 37.037 0.00 0.00 46.09 2.87
5782 6352 7.544915 GGCTACAACGAACTAATAAGTTTCTCT 59.455 37.037 0.00 0.00 46.09 3.10
5783 6353 8.923683 GCTACAACGAACTAATAAGTTTCTCTT 58.076 33.333 0.00 0.00 46.09 2.85
5786 6356 9.543783 ACAACGAACTAATAAGTTTCTCTTCTT 57.456 29.630 0.00 0.00 46.09 2.52
5787 6357 9.798885 CAACGAACTAATAAGTTTCTCTTCTTG 57.201 33.333 0.00 0.00 46.09 3.02
5788 6358 9.543783 AACGAACTAATAAGTTTCTCTTCTTGT 57.456 29.630 0.00 0.00 46.09 3.16
5789 6359 9.194271 ACGAACTAATAAGTTTCTCTTCTTGTC 57.806 33.333 0.00 0.00 46.09 3.18
5790 6360 9.193133 CGAACTAATAAGTTTCTCTTCTTGTCA 57.807 33.333 0.00 0.00 46.09 3.58
5792 6362 8.834749 ACTAATAAGTTTCTCTTCTTGTCACC 57.165 34.615 0.00 0.00 37.56 4.02
5793 6363 8.652290 ACTAATAAGTTTCTCTTCTTGTCACCT 58.348 33.333 0.00 0.00 37.56 4.00
5794 6364 9.495572 CTAATAAGTTTCTCTTCTTGTCACCTT 57.504 33.333 0.00 0.00 37.56 3.50
5795 6365 7.971183 ATAAGTTTCTCTTCTTGTCACCTTC 57.029 36.000 0.00 0.00 37.56 3.46
5796 6366 5.622346 AGTTTCTCTTCTTGTCACCTTCT 57.378 39.130 0.00 0.00 0.00 2.85
5797 6367 5.995446 AGTTTCTCTTCTTGTCACCTTCTT 58.005 37.500 0.00 0.00 0.00 2.52
5798 6368 6.418946 AGTTTCTCTTCTTGTCACCTTCTTT 58.581 36.000 0.00 0.00 0.00 2.52
5799 6369 7.565680 AGTTTCTCTTCTTGTCACCTTCTTTA 58.434 34.615 0.00 0.00 0.00 1.85
5800 6370 8.047310 AGTTTCTCTTCTTGTCACCTTCTTTAA 58.953 33.333 0.00 0.00 0.00 1.52
5801 6371 8.338986 GTTTCTCTTCTTGTCACCTTCTTTAAG 58.661 37.037 0.00 0.00 0.00 1.85
5802 6372 5.992217 TCTCTTCTTGTCACCTTCTTTAAGC 59.008 40.000 0.00 0.00 0.00 3.09
5803 6373 5.063880 TCTTCTTGTCACCTTCTTTAAGCC 58.936 41.667 0.00 0.00 0.00 4.35
5804 6374 4.706842 TCTTGTCACCTTCTTTAAGCCT 57.293 40.909 0.00 0.00 0.00 4.58
5805 6375 5.048846 TCTTGTCACCTTCTTTAAGCCTT 57.951 39.130 0.00 0.00 0.00 4.35
5806 6376 5.445964 TCTTGTCACCTTCTTTAAGCCTTT 58.554 37.500 0.00 0.00 0.00 3.11
5807 6377 5.531287 TCTTGTCACCTTCTTTAAGCCTTTC 59.469 40.000 0.00 0.00 0.00 2.62
5808 6378 4.142038 TGTCACCTTCTTTAAGCCTTTCC 58.858 43.478 0.00 0.00 0.00 3.13
5809 6379 4.141251 TGTCACCTTCTTTAAGCCTTTCCT 60.141 41.667 0.00 0.00 0.00 3.36
5810 6380 4.827835 GTCACCTTCTTTAAGCCTTTCCTT 59.172 41.667 0.00 0.00 0.00 3.36
5811 6381 5.048643 GTCACCTTCTTTAAGCCTTTCCTTC 60.049 44.000 0.00 0.00 0.00 3.46
5812 6382 5.073428 CACCTTCTTTAAGCCTTTCCTTCT 58.927 41.667 0.00 0.00 0.00 2.85
5813 6383 5.048434 CACCTTCTTTAAGCCTTTCCTTCTG 60.048 44.000 0.00 0.00 0.00 3.02
5814 6384 4.082517 CCTTCTTTAAGCCTTTCCTTCTGC 60.083 45.833 0.00 0.00 0.00 4.26
5815 6385 4.373156 TCTTTAAGCCTTTCCTTCTGCT 57.627 40.909 0.00 0.00 35.08 4.24
5816 6386 4.729868 TCTTTAAGCCTTTCCTTCTGCTT 58.270 39.130 0.00 0.00 45.37 3.91
5817 6387 4.762251 TCTTTAAGCCTTTCCTTCTGCTTC 59.238 41.667 0.00 0.00 42.66 3.86
5818 6388 1.916506 AAGCCTTTCCTTCTGCTTCC 58.083 50.000 0.00 0.00 39.76 3.46
5819 6389 0.773644 AGCCTTTCCTTCTGCTTCCA 59.226 50.000 0.00 0.00 0.00 3.53
5820 6390 1.357079 AGCCTTTCCTTCTGCTTCCAT 59.643 47.619 0.00 0.00 0.00 3.41
5821 6391 1.747924 GCCTTTCCTTCTGCTTCCATC 59.252 52.381 0.00 0.00 0.00 3.51
5822 6392 2.012673 CCTTTCCTTCTGCTTCCATCG 58.987 52.381 0.00 0.00 0.00 3.84
5823 6393 2.355108 CCTTTCCTTCTGCTTCCATCGA 60.355 50.000 0.00 0.00 0.00 3.59
5824 6394 2.680312 TTCCTTCTGCTTCCATCGAG 57.320 50.000 0.00 0.00 0.00 4.04
5825 6395 1.852633 TCCTTCTGCTTCCATCGAGA 58.147 50.000 0.00 0.00 0.00 4.04
5826 6396 2.179427 TCCTTCTGCTTCCATCGAGAA 58.821 47.619 0.00 0.00 0.00 2.87
5827 6397 2.567169 TCCTTCTGCTTCCATCGAGAAA 59.433 45.455 0.00 0.00 0.00 2.52
5828 6398 3.198635 TCCTTCTGCTTCCATCGAGAAAT 59.801 43.478 0.00 0.00 0.00 2.17
5829 6399 4.405680 TCCTTCTGCTTCCATCGAGAAATA 59.594 41.667 0.00 0.00 0.00 1.40
5830 6400 5.070981 TCCTTCTGCTTCCATCGAGAAATAT 59.929 40.000 0.00 0.00 0.00 1.28
5831 6401 6.267699 TCCTTCTGCTTCCATCGAGAAATATA 59.732 38.462 0.00 0.00 0.00 0.86
5832 6402 7.038729 TCCTTCTGCTTCCATCGAGAAATATAT 60.039 37.037 0.00 0.00 0.00 0.86
5833 6403 8.253810 CCTTCTGCTTCCATCGAGAAATATATA 58.746 37.037 0.00 0.00 0.00 0.86
5834 6404 9.814899 CTTCTGCTTCCATCGAGAAATATATAT 57.185 33.333 0.00 0.00 0.00 0.86
5859 6429 7.778470 AGATAAGTTTGGAGAAGCGATTAAG 57.222 36.000 0.00 0.00 0.00 1.85
5860 6430 6.763610 AGATAAGTTTGGAGAAGCGATTAAGG 59.236 38.462 0.00 0.00 0.00 2.69
5861 6431 4.287766 AGTTTGGAGAAGCGATTAAGGT 57.712 40.909 0.00 0.00 0.00 3.50
5862 6432 4.003648 AGTTTGGAGAAGCGATTAAGGTG 58.996 43.478 0.00 0.00 0.00 4.00
5863 6433 3.695830 TTGGAGAAGCGATTAAGGTGT 57.304 42.857 0.00 0.00 0.00 4.16
5864 6434 3.695830 TGGAGAAGCGATTAAGGTGTT 57.304 42.857 0.00 0.00 0.00 3.32
5865 6435 4.015872 TGGAGAAGCGATTAAGGTGTTT 57.984 40.909 0.00 0.00 0.00 2.83
5866 6436 4.000988 TGGAGAAGCGATTAAGGTGTTTC 58.999 43.478 0.00 0.00 0.00 2.78
5867 6437 3.374367 GGAGAAGCGATTAAGGTGTTTCC 59.626 47.826 0.00 0.00 0.00 3.13
5868 6438 4.000988 GAGAAGCGATTAAGGTGTTTCCA 58.999 43.478 0.00 0.00 39.02 3.53
5869 6439 3.751698 AGAAGCGATTAAGGTGTTTCCAC 59.248 43.478 0.00 0.00 41.06 4.02
5870 6440 3.418684 AGCGATTAAGGTGTTTCCACT 57.581 42.857 0.00 0.00 41.53 4.00
5871 6441 3.335579 AGCGATTAAGGTGTTTCCACTC 58.664 45.455 0.00 0.00 41.53 3.51
5872 6442 3.008049 AGCGATTAAGGTGTTTCCACTCT 59.992 43.478 0.00 0.00 41.53 3.24
5873 6443 3.751698 GCGATTAAGGTGTTTCCACTCTT 59.248 43.478 0.00 0.00 41.53 2.85
5874 6444 4.933400 GCGATTAAGGTGTTTCCACTCTTA 59.067 41.667 0.00 0.00 41.53 2.10
5875 6445 5.063564 GCGATTAAGGTGTTTCCACTCTTAG 59.936 44.000 0.00 0.00 41.53 2.18
5876 6446 5.581085 CGATTAAGGTGTTTCCACTCTTAGG 59.419 44.000 0.00 0.00 41.53 2.69
5877 6447 5.899631 TTAAGGTGTTTCCACTCTTAGGT 57.100 39.130 0.00 0.00 41.53 3.08
5878 6448 4.790718 AAGGTGTTTCCACTCTTAGGTT 57.209 40.909 0.00 0.00 41.53 3.50
5879 6449 4.086706 AGGTGTTTCCACTCTTAGGTTG 57.913 45.455 0.00 0.00 41.53 3.77
5880 6450 3.458487 AGGTGTTTCCACTCTTAGGTTGT 59.542 43.478 0.00 0.00 41.53 3.32
5881 6451 4.079958 AGGTGTTTCCACTCTTAGGTTGTT 60.080 41.667 0.00 0.00 41.53 2.83
5882 6452 4.275196 GGTGTTTCCACTCTTAGGTTGTTC 59.725 45.833 0.00 0.00 41.53 3.18
5883 6453 4.879545 GTGTTTCCACTCTTAGGTTGTTCA 59.120 41.667 0.00 0.00 38.61 3.18
5884 6454 5.355910 GTGTTTCCACTCTTAGGTTGTTCAA 59.644 40.000 0.00 0.00 38.61 2.69
5885 6455 6.039382 GTGTTTCCACTCTTAGGTTGTTCAAT 59.961 38.462 0.00 0.00 38.61 2.57
5886 6456 7.227910 GTGTTTCCACTCTTAGGTTGTTCAATA 59.772 37.037 0.00 0.00 38.61 1.90
5887 6457 7.942341 TGTTTCCACTCTTAGGTTGTTCAATAT 59.058 33.333 0.00 0.00 0.00 1.28
5888 6458 7.921786 TTCCACTCTTAGGTTGTTCAATATG 57.078 36.000 0.00 0.00 0.00 1.78
5889 6459 5.880332 TCCACTCTTAGGTTGTTCAATATGC 59.120 40.000 0.00 0.00 0.00 3.14
5890 6460 5.647658 CCACTCTTAGGTTGTTCAATATGCA 59.352 40.000 0.00 0.00 0.00 3.96
5891 6461 6.150976 CCACTCTTAGGTTGTTCAATATGCAA 59.849 38.462 0.00 0.00 0.00 4.08
5892 6462 7.309133 CCACTCTTAGGTTGTTCAATATGCAAA 60.309 37.037 0.00 0.00 0.00 3.68
5893 6463 7.752239 CACTCTTAGGTTGTTCAATATGCAAAG 59.248 37.037 0.00 0.00 0.00 2.77
5894 6464 7.665559 ACTCTTAGGTTGTTCAATATGCAAAGA 59.334 33.333 0.00 0.00 0.00 2.52
5895 6465 7.816640 TCTTAGGTTGTTCAATATGCAAAGAC 58.183 34.615 0.00 0.00 0.00 3.01
5896 6466 5.391312 AGGTTGTTCAATATGCAAAGACC 57.609 39.130 0.00 0.00 0.00 3.85
5897 6467 4.082787 AGGTTGTTCAATATGCAAAGACCG 60.083 41.667 0.00 0.00 0.00 4.79
5898 6468 4.320935 GGTTGTTCAATATGCAAAGACCGT 60.321 41.667 0.00 0.00 0.00 4.83
5899 6469 4.418013 TGTTCAATATGCAAAGACCGTG 57.582 40.909 0.00 0.00 0.00 4.94
5900 6470 3.818210 TGTTCAATATGCAAAGACCGTGT 59.182 39.130 0.00 0.00 0.00 4.49
5901 6471 4.083537 TGTTCAATATGCAAAGACCGTGTC 60.084 41.667 0.00 0.00 0.00 3.67
5902 6472 3.669536 TCAATATGCAAAGACCGTGTCA 58.330 40.909 0.00 0.00 34.60 3.58
5903 6473 4.068599 TCAATATGCAAAGACCGTGTCAA 58.931 39.130 0.00 0.00 34.60 3.18
5904 6474 4.699735 TCAATATGCAAAGACCGTGTCAAT 59.300 37.500 0.00 0.00 34.60 2.57
5905 6475 4.882671 ATATGCAAAGACCGTGTCAATC 57.117 40.909 0.00 0.00 34.60 2.67
5906 6476 1.960417 TGCAAAGACCGTGTCAATCA 58.040 45.000 6.78 0.00 34.60 2.57
5907 6477 1.601903 TGCAAAGACCGTGTCAATCAC 59.398 47.619 6.78 0.00 43.03 3.06
5908 6478 1.873591 GCAAAGACCGTGTCAATCACT 59.126 47.619 6.78 0.00 44.16 3.41
5909 6479 3.064207 GCAAAGACCGTGTCAATCACTA 58.936 45.455 6.78 0.00 44.16 2.74
5910 6480 3.120649 GCAAAGACCGTGTCAATCACTAC 60.121 47.826 6.78 0.00 44.16 2.73
5911 6481 4.055360 CAAAGACCGTGTCAATCACTACA 58.945 43.478 6.78 0.00 44.16 2.74
5912 6482 3.299340 AGACCGTGTCAATCACTACAC 57.701 47.619 6.78 0.00 44.16 2.90
5913 6483 2.029290 AGACCGTGTCAATCACTACACC 60.029 50.000 6.78 0.00 42.39 4.16
5914 6484 1.689813 ACCGTGTCAATCACTACACCA 59.310 47.619 0.00 0.00 42.39 4.17
5915 6485 2.288825 ACCGTGTCAATCACTACACCAG 60.289 50.000 0.00 0.00 42.39 4.00
5916 6486 2.288825 CCGTGTCAATCACTACACCAGT 60.289 50.000 0.00 0.00 42.39 4.00
5928 6498 4.243270 ACTACACCAGTGATACGAAAAGC 58.757 43.478 4.48 0.00 35.62 3.51
5929 6499 3.120321 ACACCAGTGATACGAAAAGCA 57.880 42.857 4.48 0.00 0.00 3.91
5930 6500 3.472652 ACACCAGTGATACGAAAAGCAA 58.527 40.909 4.48 0.00 0.00 3.91
5931 6501 3.498397 ACACCAGTGATACGAAAAGCAAG 59.502 43.478 4.48 0.00 0.00 4.01
5932 6502 2.484264 ACCAGTGATACGAAAAGCAAGC 59.516 45.455 0.00 0.00 0.00 4.01
5933 6503 2.483877 CCAGTGATACGAAAAGCAAGCA 59.516 45.455 0.00 0.00 0.00 3.91
5934 6504 3.127548 CCAGTGATACGAAAAGCAAGCAT 59.872 43.478 0.00 0.00 0.00 3.79
5935 6505 4.379813 CCAGTGATACGAAAAGCAAGCATT 60.380 41.667 0.00 0.00 0.00 3.56
5936 6506 4.790140 CAGTGATACGAAAAGCAAGCATTC 59.210 41.667 0.00 0.00 0.00 2.67
5937 6507 4.697352 AGTGATACGAAAAGCAAGCATTCT 59.303 37.500 0.00 0.00 0.00 2.40
5938 6508 5.182001 AGTGATACGAAAAGCAAGCATTCTT 59.818 36.000 0.00 0.00 0.00 2.52
5939 6509 5.509622 GTGATACGAAAAGCAAGCATTCTTC 59.490 40.000 0.00 0.00 0.00 2.87
5940 6510 5.412594 TGATACGAAAAGCAAGCATTCTTCT 59.587 36.000 0.00 0.00 0.00 2.85
5941 6511 4.152607 ACGAAAAGCAAGCATTCTTCTC 57.847 40.909 0.00 0.00 0.00 2.87
5942 6512 3.057946 ACGAAAAGCAAGCATTCTTCTCC 60.058 43.478 0.00 0.00 0.00 3.71
5943 6513 3.058016 CGAAAAGCAAGCATTCTTCTCCA 60.058 43.478 0.00 0.00 0.00 3.86
5944 6514 4.483311 GAAAAGCAAGCATTCTTCTCCAG 58.517 43.478 0.00 0.00 0.00 3.86
5945 6515 1.461559 AGCAAGCATTCTTCTCCAGC 58.538 50.000 0.00 0.00 0.00 4.85
5946 6516 1.004511 AGCAAGCATTCTTCTCCAGCT 59.995 47.619 0.00 0.00 37.08 4.24
5947 6517 1.132643 GCAAGCATTCTTCTCCAGCTG 59.867 52.381 6.78 6.78 35.42 4.24
5948 6518 2.708051 CAAGCATTCTTCTCCAGCTGA 58.292 47.619 17.39 0.00 35.42 4.26
5949 6519 2.399916 AGCATTCTTCTCCAGCTGAC 57.600 50.000 17.39 0.00 33.67 3.51
5950 6520 1.005340 GCATTCTTCTCCAGCTGACG 58.995 55.000 17.39 5.51 0.00 4.35
5951 6521 1.674221 GCATTCTTCTCCAGCTGACGT 60.674 52.381 17.39 0.00 0.00 4.34
5952 6522 2.417379 GCATTCTTCTCCAGCTGACGTA 60.417 50.000 17.39 0.00 0.00 3.57
5953 6523 3.182967 CATTCTTCTCCAGCTGACGTAC 58.817 50.000 17.39 0.00 0.00 3.67
5954 6524 0.803117 TCTTCTCCAGCTGACGTACG 59.197 55.000 17.39 15.01 0.00 3.67
5955 6525 0.179161 CTTCTCCAGCTGACGTACGG 60.179 60.000 21.06 2.64 0.00 4.02
5956 6526 0.607217 TTCTCCAGCTGACGTACGGA 60.607 55.000 21.06 4.56 0.00 4.69
5957 6527 1.136984 CTCCAGCTGACGTACGGAC 59.863 63.158 21.06 13.48 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 0.933509 CGTTCTAGCGGATGTACGGC 60.934 60.000 0.00 0.00 43.63 5.68
48 49 1.112113 GCCGTTCAGGAGGTATGAGA 58.888 55.000 0.00 0.00 45.00 3.27
68 69 1.819288 GAGTGTGGACGGAAGATCTGA 59.181 52.381 0.00 0.00 0.00 3.27
78 79 3.406361 GTGCTGCGAGTGTGGACG 61.406 66.667 0.00 0.00 0.00 4.79
79 80 1.230635 AATGTGCTGCGAGTGTGGAC 61.231 55.000 0.00 0.00 0.00 4.02
104 106 2.664436 GGCAGTTACACGTGGACGC 61.664 63.158 21.57 21.15 44.43 5.19
191 199 0.821711 TGGGAGTTTTGCTTCGTGGG 60.822 55.000 0.00 0.00 0.00 4.61
237 246 2.938428 AAATGGGGGATTTGCTGGTA 57.062 45.000 0.00 0.00 32.69 3.25
342 351 7.577303 TGGATATTTGCTGGATCTTTTACTCT 58.423 34.615 0.00 0.00 0.00 3.24
343 352 7.807977 TGGATATTTGCTGGATCTTTTACTC 57.192 36.000 0.00 0.00 0.00 2.59
429 444 2.530958 GAAGTGGGGGAAATCGCGGA 62.531 60.000 6.13 0.00 0.00 5.54
506 528 1.608590 AGTGATGCCGGAAACAACAAG 59.391 47.619 5.05 0.00 0.00 3.16
639 669 2.033424 GCTGGGAAAATCTATCAACGGC 59.967 50.000 0.00 0.00 0.00 5.68
655 685 2.968206 GAGGCAGCAAAAGCTGGG 59.032 61.111 17.97 0.00 38.18 4.45
682 712 1.267121 ATCCCAGCGCGGATATTAGT 58.733 50.000 14.36 0.00 41.04 2.24
813 850 2.166270 CAGAACTTCTTCTGCCGCC 58.834 57.895 0.00 0.00 45.43 6.13
822 859 0.392193 CATCGCCCAGCAGAACTTCT 60.392 55.000 0.00 0.00 0.00 2.85
948 985 4.856765 TCCCAAAACCCTAATAACCTACCA 59.143 41.667 0.00 0.00 0.00 3.25
1081 1119 2.105993 TCCTCTCGATCTTCCGACCATA 59.894 50.000 0.00 0.00 34.56 2.74
1149 1187 1.648467 GCAAGACACCAATCTCCGCC 61.648 60.000 0.00 0.00 0.00 6.13
1150 1188 0.955428 TGCAAGACACCAATCTCCGC 60.955 55.000 0.00 0.00 0.00 5.54
1389 1427 2.998316 TGTGATTATCGCCACCATCA 57.002 45.000 3.14 0.00 32.61 3.07
1405 1443 3.743521 TGAGAACATGAACTCCCTTGTG 58.256 45.455 16.46 0.00 32.84 3.33
1407 1445 2.746362 GCTGAGAACATGAACTCCCTTG 59.254 50.000 16.46 8.78 32.84 3.61
1419 1457 4.644234 TCCTTTTTGACAATGCTGAGAACA 59.356 37.500 0.00 0.00 0.00 3.18
1479 1517 0.462789 CTCTATACCCCGCAACGGTT 59.537 55.000 5.17 0.00 46.80 4.44
1482 1520 0.314302 CCTCTCTATACCCCGCAACG 59.686 60.000 0.00 0.00 0.00 4.10
1680 1718 7.867403 CACAATTGATTAAGTTTGGTAAGCAGT 59.133 33.333 13.59 0.00 29.34 4.40
1713 1751 3.931907 TCATATTTCCCACTCCACCTG 57.068 47.619 0.00 0.00 0.00 4.00
1905 1943 4.047059 GGACCGCCGACAACGAGA 62.047 66.667 0.00 0.00 42.66 4.04
1959 1997 1.986757 GGCTGTGGCTCTCTCCTGA 60.987 63.158 0.00 0.00 38.73 3.86
2025 2063 5.053978 AGGTCTCCATCAAAAGTGAAAGT 57.946 39.130 0.00 0.00 37.30 2.66
2026 2064 5.766222 CAAGGTCTCCATCAAAAGTGAAAG 58.234 41.667 0.00 0.00 37.30 2.62
2027 2065 4.037923 GCAAGGTCTCCATCAAAAGTGAAA 59.962 41.667 0.00 0.00 37.30 2.69
2030 2068 3.152341 AGCAAGGTCTCCATCAAAAGTG 58.848 45.455 0.00 0.00 0.00 3.16
2031 2069 3.515602 AGCAAGGTCTCCATCAAAAGT 57.484 42.857 0.00 0.00 0.00 2.66
2033 2071 6.064060 CCATATAGCAAGGTCTCCATCAAAA 58.936 40.000 0.00 0.00 0.00 2.44
2069 2108 4.443063 CAGCCGAATTGCACATCATTAATG 59.557 41.667 9.29 9.29 41.48 1.90
2129 2168 4.974645 TCCGGAGCCAATCAAACTATAT 57.025 40.909 0.00 0.00 0.00 0.86
2142 2181 6.038997 AGTATTTATGATACTTCCGGAGCC 57.961 41.667 3.34 0.00 31.28 4.70
2172 2211 9.899226 GTCAAAAATGCTCTTATATTATGGGAC 57.101 33.333 0.00 0.00 0.00 4.46
2205 2244 2.168496 CTCCCTCCGTCTTGACACTAA 58.832 52.381 1.59 0.00 0.00 2.24
2319 2358 2.015587 ACGTTACAAAGAAACCGCCAA 58.984 42.857 0.00 0.00 0.00 4.52
2396 2436 8.040132 ACTTGGACAAACAGAAAATTTCATGAA 58.960 29.630 3.38 3.38 0.00 2.57
2400 2440 9.883142 ATAAACTTGGACAAACAGAAAATTTCA 57.117 25.926 8.55 0.00 0.00 2.69
2437 2477 1.006337 TGGCGCAAAAAGGCATGAC 60.006 52.632 10.83 0.00 39.30 3.06
2570 2612 2.037772 AGAGTGGAGTTCGAAGTTGCAT 59.962 45.455 6.99 0.00 0.00 3.96
2623 2666 4.330074 ACAATTCCTTCGAAAGCTATGTCG 59.670 41.667 0.00 7.80 38.62 4.35
2636 2679 2.277084 ACGCACGGATACAATTCCTTC 58.723 47.619 0.00 0.00 33.30 3.46
2853 2939 2.566833 AGCACCATGTACTCAGCAAA 57.433 45.000 0.00 0.00 0.00 3.68
2921 3007 6.985117 TGCATCTGACAGCTAAATTTTCTTT 58.015 32.000 0.00 0.00 0.00 2.52
2969 3094 5.324409 TCTTCCTGTTATGCAAATTCAGGT 58.676 37.500 21.29 0.00 44.00 4.00
3057 3244 4.987912 CGGTTTGAGTTTTAAATGCATGGT 59.012 37.500 0.00 0.00 0.00 3.55
3062 3249 6.576551 TTGTTCGGTTTGAGTTTTAAATGC 57.423 33.333 0.00 0.00 0.00 3.56
3064 3251 8.974408 GCTAATTGTTCGGTTTGAGTTTTAAAT 58.026 29.630 0.00 0.00 0.00 1.40
3124 3311 6.669125 TGGTCAACCATTGAATTGATCTTT 57.331 33.333 12.35 0.00 42.01 2.52
3192 3726 5.536161 ACCACTTGACATCTTTAGCAATTGT 59.464 36.000 7.40 0.00 0.00 2.71
3204 3738 8.542497 TGTTACAACTATTACCACTTGACATC 57.458 34.615 0.00 0.00 0.00 3.06
3462 4012 1.595093 GCTATTTGCAAGGCGGGTGT 61.595 55.000 0.00 0.00 42.31 4.16
3464 4014 1.000896 AGCTATTTGCAAGGCGGGT 60.001 52.632 0.00 0.00 45.94 5.28
3471 4021 5.840243 ATTAGCACATCAGCTATTTGCAA 57.160 34.783 0.00 0.00 45.72 4.08
3475 4025 8.680903 GCCAATATATTAGCACATCAGCTATTT 58.319 33.333 10.53 0.00 45.72 1.40
3484 4034 5.891198 TCCCTTGCCAATATATTAGCACAT 58.109 37.500 16.71 0.00 34.30 3.21
3490 4040 4.947388 GCGGATTCCCTTGCCAATATATTA 59.053 41.667 0.00 0.00 0.00 0.98
3502 4052 4.489771 CTGGCGGCGGATTCCCTT 62.490 66.667 13.52 0.00 0.00 3.95
3520 4070 4.383602 CCACGAGCGGGCAAAACG 62.384 66.667 0.00 0.00 0.00 3.60
3567 4117 3.058085 CCAAAATTTTGAAGCCATGCCAC 60.058 43.478 28.44 0.00 40.55 5.01
3644 4194 4.269603 CGTTTGGATCATAGTCAAGAGCTG 59.730 45.833 0.00 0.00 0.00 4.24
3645 4195 4.437239 CGTTTGGATCATAGTCAAGAGCT 58.563 43.478 0.00 0.00 0.00 4.09
3646 4196 3.557595 CCGTTTGGATCATAGTCAAGAGC 59.442 47.826 0.00 0.00 37.49 4.09
3647 4197 3.557595 GCCGTTTGGATCATAGTCAAGAG 59.442 47.826 0.00 0.00 37.49 2.85
3648 4198 3.531538 GCCGTTTGGATCATAGTCAAGA 58.468 45.455 0.00 0.00 37.49 3.02
3649 4199 2.614057 GGCCGTTTGGATCATAGTCAAG 59.386 50.000 0.00 0.00 37.49 3.02
3650 4200 2.639065 GGCCGTTTGGATCATAGTCAA 58.361 47.619 0.00 0.00 37.49 3.18
3651 4201 1.134220 GGGCCGTTTGGATCATAGTCA 60.134 52.381 0.00 0.00 37.49 3.41
3652 4202 1.594331 GGGCCGTTTGGATCATAGTC 58.406 55.000 0.00 0.00 37.49 2.59
3653 4203 0.182775 GGGGCCGTTTGGATCATAGT 59.817 55.000 0.00 0.00 37.49 2.12
3679 4239 7.147966 TGCTAAGAGATAACGTCCAAGACATAA 60.148 37.037 0.00 0.00 32.09 1.90
3790 4354 9.807921 AGGAAATAACAAAGATACCAGAAAAGA 57.192 29.630 0.00 0.00 0.00 2.52
3976 4542 0.457035 CACAATTAATGCCTGGCGCT 59.543 50.000 14.98 5.85 38.78 5.92
3981 4547 4.654015 GCAAAATGCACAATTAATGCCTG 58.346 39.130 10.50 5.26 44.26 4.85
3997 4563 3.603365 GCTAGGCGGTGGCAAAAT 58.397 55.556 0.00 0.00 42.47 1.82
4075 4641 1.516110 ATGCACAGATCCTTAGGCCT 58.484 50.000 11.78 11.78 0.00 5.19
4093 4659 7.443302 TGGAGAGAAAACAATCAGATCCTAT 57.557 36.000 0.00 0.00 0.00 2.57
4128 4694 5.507482 GCTCAGTATCATAACTTCCTGCGTA 60.507 44.000 0.00 0.00 0.00 4.42
4227 4793 6.460987 CAAGCAAAAACAAGAGAGAAAAACG 58.539 36.000 0.00 0.00 0.00 3.60
4236 4803 1.854126 CGGTGCAAGCAAAAACAAGAG 59.146 47.619 0.00 0.00 0.00 2.85
4251 4818 5.405571 CACTTGTCCATAACTATATCGGTGC 59.594 44.000 0.00 0.00 0.00 5.01
4322 4889 1.521681 GTCCTGTATGTCCGCCAGC 60.522 63.158 0.00 0.00 0.00 4.85
4337 4904 2.503356 ACATTCCTCTGGAGACATGTCC 59.497 50.000 22.21 13.24 41.51 4.02
4437 5004 5.580691 TGCAGGACAAATCGACTTGTTATAG 59.419 40.000 14.12 5.97 39.63 1.31
4519 5086 4.322567 AGCTGAACAAATGAGAAGGAGAC 58.677 43.478 0.00 0.00 0.00 3.36
4527 5094 6.890663 TTTTGAACAAGCTGAACAAATGAG 57.109 33.333 0.00 0.00 31.32 2.90
4554 5122 4.047142 GCTGGTTTGAAGAAGAAAAGCTG 58.953 43.478 0.00 0.00 35.38 4.24
4603 5171 1.066573 CATCTTTCTGCCTCCTGTCGT 60.067 52.381 0.00 0.00 0.00 4.34
4604 5172 1.649664 CATCTTTCTGCCTCCTGTCG 58.350 55.000 0.00 0.00 0.00 4.35
4742 5311 6.016276 GGGATGCTGTCTTTCAGTTAGAAAAA 60.016 38.462 0.00 0.00 45.11 1.94
4747 5316 3.942829 TGGGATGCTGTCTTTCAGTTAG 58.057 45.455 0.00 0.00 45.23 2.34
4777 5346 2.878406 ACACGAAAACAGAACATCAGGG 59.122 45.455 0.00 0.00 0.00 4.45
4860 5429 2.719354 GTCACCGCGTTTTTGCCT 59.281 55.556 4.92 0.00 0.00 4.75
5007 5576 5.968676 TGTACCACTAGGCTCCAAAATAT 57.031 39.130 0.00 0.00 39.06 1.28
5065 5634 4.835678 TCTGAAGAATCATACAGCAGCAA 58.164 39.130 0.00 0.00 34.37 3.91
5196 5765 5.159209 GTGAAATGAAGCAACATCTTCCAG 58.841 41.667 1.63 0.00 41.23 3.86
5407 5977 7.386299 TGCTGAAATTCTCTCTGAAAGAACTAC 59.614 37.037 0.00 0.00 46.34 2.73
5419 5989 6.198591 GCATGCTAAATTGCTGAAATTCTCTC 59.801 38.462 11.37 0.00 37.51 3.20
5432 6002 4.989797 TGGACACAAAAGCATGCTAAATTG 59.010 37.500 26.55 26.55 0.00 2.32
5448 6018 5.888724 TGGTTAAAATCTTGTTCTGGACACA 59.111 36.000 0.00 0.00 38.18 3.72
5468 6038 7.781693 ACAGAAGAAATCCAGCAATATATGGTT 59.218 33.333 0.00 0.00 37.77 3.67
5469 6039 7.230108 CACAGAAGAAATCCAGCAATATATGGT 59.770 37.037 0.00 0.00 41.41 3.55
5474 6044 4.340381 GCCACAGAAGAAATCCAGCAATAT 59.660 41.667 0.00 0.00 0.00 1.28
5479 6049 1.831580 AGCCACAGAAGAAATCCAGC 58.168 50.000 0.00 0.00 0.00 4.85
5483 6053 7.150783 ACATAAAGAAGCCACAGAAGAAATC 57.849 36.000 0.00 0.00 0.00 2.17
5484 6054 7.530426 AACATAAAGAAGCCACAGAAGAAAT 57.470 32.000 0.00 0.00 0.00 2.17
5485 6055 6.959639 AACATAAAGAAGCCACAGAAGAAA 57.040 33.333 0.00 0.00 0.00 2.52
5487 6057 6.430000 GGTAAACATAAAGAAGCCACAGAAGA 59.570 38.462 0.00 0.00 0.00 2.87
5488 6058 6.349363 GGGTAAACATAAAGAAGCCACAGAAG 60.349 42.308 0.00 0.00 0.00 2.85
5490 6060 5.007682 GGGTAAACATAAAGAAGCCACAGA 58.992 41.667 0.00 0.00 0.00 3.41
5491 6061 4.764823 TGGGTAAACATAAAGAAGCCACAG 59.235 41.667 0.00 0.00 33.04 3.66
5494 6064 3.754323 CGTGGGTAAACATAAAGAAGCCA 59.246 43.478 0.00 0.00 35.47 4.75
5495 6065 3.427098 GCGTGGGTAAACATAAAGAAGCC 60.427 47.826 0.00 0.00 0.00 4.35
5496 6066 3.427098 GGCGTGGGTAAACATAAAGAAGC 60.427 47.826 0.00 0.00 0.00 3.86
5497 6067 3.181514 CGGCGTGGGTAAACATAAAGAAG 60.182 47.826 0.00 0.00 0.00 2.85
5498 6068 2.743126 CGGCGTGGGTAAACATAAAGAA 59.257 45.455 0.00 0.00 0.00 2.52
5500 6070 1.202098 GCGGCGTGGGTAAACATAAAG 60.202 52.381 9.37 0.00 0.00 1.85
5501 6071 0.803740 GCGGCGTGGGTAAACATAAA 59.196 50.000 9.37 0.00 0.00 1.40
5502 6072 1.360194 CGCGGCGTGGGTAAACATAA 61.360 55.000 15.36 0.00 0.00 1.90
5503 6073 1.810441 CGCGGCGTGGGTAAACATA 60.810 57.895 15.36 0.00 0.00 2.29
5504 6074 3.122323 CGCGGCGTGGGTAAACAT 61.122 61.111 15.36 0.00 0.00 2.71
5516 6086 2.604614 CCTTTTATTGAATAGCCGCGGC 60.605 50.000 42.34 42.34 42.33 6.53
5517 6087 2.031157 CCCTTTTATTGAATAGCCGCGG 60.031 50.000 24.05 24.05 0.00 6.46
5518 6088 2.616842 ACCCTTTTATTGAATAGCCGCG 59.383 45.455 0.00 0.00 0.00 6.46
5519 6089 4.359706 CAACCCTTTTATTGAATAGCCGC 58.640 43.478 0.00 0.00 0.00 6.53
5520 6090 4.401202 ACCAACCCTTTTATTGAATAGCCG 59.599 41.667 0.00 0.00 0.00 5.52
5522 6092 7.640597 ACTACCAACCCTTTTATTGAATAGC 57.359 36.000 0.00 0.00 0.00 2.97
5525 6095 9.596308 AACTAACTACCAACCCTTTTATTGAAT 57.404 29.630 0.00 0.00 0.00 2.57
5526 6096 8.852135 CAACTAACTACCAACCCTTTTATTGAA 58.148 33.333 0.00 0.00 0.00 2.69
5528 6098 7.088272 GCAACTAACTACCAACCCTTTTATTG 58.912 38.462 0.00 0.00 0.00 1.90
5529 6099 6.209986 GGCAACTAACTACCAACCCTTTTATT 59.790 38.462 0.00 0.00 0.00 1.40
5530 6100 5.713389 GGCAACTAACTACCAACCCTTTTAT 59.287 40.000 0.00 0.00 0.00 1.40
5531 6101 5.072055 GGCAACTAACTACCAACCCTTTTA 58.928 41.667 0.00 0.00 0.00 1.52
5532 6102 3.893200 GGCAACTAACTACCAACCCTTTT 59.107 43.478 0.00 0.00 0.00 2.27
5534 6104 3.150458 GGCAACTAACTACCAACCCTT 57.850 47.619 0.00 0.00 0.00 3.95
5535 6105 2.873094 GGCAACTAACTACCAACCCT 57.127 50.000 0.00 0.00 0.00 4.34
5558 6128 5.545063 AAGAAAACCAACAACCAATAGGG 57.455 39.130 0.00 0.00 44.81 3.53
5559 6129 6.816136 AGAAAGAAAACCAACAACCAATAGG 58.184 36.000 0.00 0.00 42.21 2.57
5563 6133 4.775253 AGGAGAAAGAAAACCAACAACCAA 59.225 37.500 0.00 0.00 0.00 3.67
5564 6134 4.349365 AGGAGAAAGAAAACCAACAACCA 58.651 39.130 0.00 0.00 0.00 3.67
5565 6135 4.645136 AGAGGAGAAAGAAAACCAACAACC 59.355 41.667 0.00 0.00 0.00 3.77
5568 6138 3.632145 GCAGAGGAGAAAGAAAACCAACA 59.368 43.478 0.00 0.00 0.00 3.33
5569 6139 3.304057 CGCAGAGGAGAAAGAAAACCAAC 60.304 47.826 0.00 0.00 0.00 3.77
5570 6140 2.878406 CGCAGAGGAGAAAGAAAACCAA 59.122 45.455 0.00 0.00 0.00 3.67
5572 6142 2.495084 ACGCAGAGGAGAAAGAAAACC 58.505 47.619 0.00 0.00 0.00 3.27
5573 6143 3.363084 CGAACGCAGAGGAGAAAGAAAAC 60.363 47.826 0.00 0.00 0.00 2.43
5574 6144 2.800544 CGAACGCAGAGGAGAAAGAAAA 59.199 45.455 0.00 0.00 0.00 2.29
5575 6145 2.223971 ACGAACGCAGAGGAGAAAGAAA 60.224 45.455 0.00 0.00 0.00 2.52
5576 6146 1.340248 ACGAACGCAGAGGAGAAAGAA 59.660 47.619 0.00 0.00 0.00 2.52
5578 6148 1.063806 CACGAACGCAGAGGAGAAAG 58.936 55.000 0.00 0.00 0.00 2.62
5579 6149 0.671796 TCACGAACGCAGAGGAGAAA 59.328 50.000 0.00 0.00 0.00 2.52
5580 6150 0.671796 TTCACGAACGCAGAGGAGAA 59.328 50.000 0.00 0.00 0.00 2.87
5581 6151 0.671796 TTTCACGAACGCAGAGGAGA 59.328 50.000 0.00 0.00 0.00 3.71
5583 6153 1.497991 CTTTTCACGAACGCAGAGGA 58.502 50.000 0.00 0.00 0.00 3.71
5584 6154 0.110644 GCTTTTCACGAACGCAGAGG 60.111 55.000 0.00 0.00 0.00 3.69
5587 6157 1.792949 ACTAGCTTTTCACGAACGCAG 59.207 47.619 0.00 0.00 0.00 5.18
5588 6158 1.860676 ACTAGCTTTTCACGAACGCA 58.139 45.000 0.00 0.00 0.00 5.24
5589 6159 3.781280 GCATACTAGCTTTTCACGAACGC 60.781 47.826 0.00 0.00 0.00 4.84
5590 6160 3.612860 AGCATACTAGCTTTTCACGAACG 59.387 43.478 0.00 0.00 43.70 3.95
5591 6161 4.259451 CGAGCATACTAGCTTTTCACGAAC 60.259 45.833 0.00 0.00 46.75 3.95
5592 6162 3.857665 CGAGCATACTAGCTTTTCACGAA 59.142 43.478 0.00 0.00 46.75 3.85
5593 6163 3.435566 CGAGCATACTAGCTTTTCACGA 58.564 45.455 0.00 0.00 46.75 4.35
5594 6164 2.034507 GCGAGCATACTAGCTTTTCACG 60.035 50.000 0.00 0.00 46.75 4.35
5595 6165 2.034507 CGCGAGCATACTAGCTTTTCAC 60.035 50.000 0.00 0.00 46.75 3.18
5596 6166 2.193447 CGCGAGCATACTAGCTTTTCA 58.807 47.619 0.00 0.00 46.75 2.69
5597 6167 1.523095 CCGCGAGCATACTAGCTTTTC 59.477 52.381 8.23 0.00 46.75 2.29
5598 6168 1.136305 TCCGCGAGCATACTAGCTTTT 59.864 47.619 8.23 0.00 46.75 2.27
5599 6169 0.744874 TCCGCGAGCATACTAGCTTT 59.255 50.000 8.23 0.00 46.75 3.51
5600 6170 0.744874 TTCCGCGAGCATACTAGCTT 59.255 50.000 8.23 0.00 46.75 3.74
5602 6172 1.721926 GATTTCCGCGAGCATACTAGC 59.278 52.381 8.23 0.00 40.78 3.42
5605 6175 2.036475 AGATGATTTCCGCGAGCATACT 59.964 45.455 8.23 0.00 0.00 2.12
5606 6176 2.408050 AGATGATTTCCGCGAGCATAC 58.592 47.619 8.23 0.00 0.00 2.39
5607 6177 2.820059 AGATGATTTCCGCGAGCATA 57.180 45.000 8.23 0.00 0.00 3.14
5608 6178 2.820059 TAGATGATTTCCGCGAGCAT 57.180 45.000 8.23 1.03 0.00 3.79
5610 6180 2.221981 CCTTTAGATGATTTCCGCGAGC 59.778 50.000 8.23 0.00 0.00 5.03
5611 6181 3.717707 TCCTTTAGATGATTTCCGCGAG 58.282 45.455 8.23 0.00 0.00 5.03
5612 6182 3.812156 TCCTTTAGATGATTTCCGCGA 57.188 42.857 8.23 0.00 0.00 5.87
5613 6183 4.332819 AGTTTCCTTTAGATGATTTCCGCG 59.667 41.667 0.00 0.00 0.00 6.46
5614 6184 5.819825 AGTTTCCTTTAGATGATTTCCGC 57.180 39.130 0.00 0.00 0.00 5.54
5615 6185 8.391106 CAAGTAGTTTCCTTTAGATGATTTCCG 58.609 37.037 0.00 0.00 0.00 4.30
5616 6186 8.184848 GCAAGTAGTTTCCTTTAGATGATTTCC 58.815 37.037 0.00 0.00 0.00 3.13
5617 6187 8.951243 AGCAAGTAGTTTCCTTTAGATGATTTC 58.049 33.333 0.00 0.00 0.00 2.17
5618 6188 8.870075 AGCAAGTAGTTTCCTTTAGATGATTT 57.130 30.769 0.00 0.00 0.00 2.17
5620 6190 9.384764 GTTAGCAAGTAGTTTCCTTTAGATGAT 57.615 33.333 0.00 0.00 0.00 2.45
5622 6192 8.779354 AGTTAGCAAGTAGTTTCCTTTAGATG 57.221 34.615 0.00 0.00 0.00 2.90
5623 6193 7.760340 CGAGTTAGCAAGTAGTTTCCTTTAGAT 59.240 37.037 0.00 0.00 0.00 1.98
5624 6194 7.088905 CGAGTTAGCAAGTAGTTTCCTTTAGA 58.911 38.462 0.00 0.00 0.00 2.10
5626 6196 5.636543 GCGAGTTAGCAAGTAGTTTCCTTTA 59.363 40.000 0.00 0.00 37.05 1.85
5627 6197 4.451435 GCGAGTTAGCAAGTAGTTTCCTTT 59.549 41.667 0.00 0.00 37.05 3.11
5628 6198 3.995048 GCGAGTTAGCAAGTAGTTTCCTT 59.005 43.478 0.00 0.00 37.05 3.36
5630 6200 2.671888 GGCGAGTTAGCAAGTAGTTTCC 59.328 50.000 0.00 0.00 39.27 3.13
5631 6201 3.323243 TGGCGAGTTAGCAAGTAGTTTC 58.677 45.455 0.00 0.00 39.27 2.78
5632 6202 3.396260 TGGCGAGTTAGCAAGTAGTTT 57.604 42.857 0.00 0.00 39.27 2.66
5633 6203 3.064931 GTTGGCGAGTTAGCAAGTAGTT 58.935 45.455 0.00 0.00 39.27 2.24
5635 6205 2.683968 TGTTGGCGAGTTAGCAAGTAG 58.316 47.619 0.00 0.00 39.27 2.57
5636 6206 2.823924 TGTTGGCGAGTTAGCAAGTA 57.176 45.000 0.00 0.00 39.27 2.24
5639 6209 1.871039 GTCTTGTTGGCGAGTTAGCAA 59.129 47.619 0.00 0.00 39.27 3.91
5648 6218 0.600255 AGAAGTCCGTCTTGTTGGCG 60.600 55.000 0.00 0.00 44.42 5.69
5649 6219 1.531578 GAAGAAGTCCGTCTTGTTGGC 59.468 52.381 0.14 0.00 39.28 4.52
5650 6220 2.143925 GGAAGAAGTCCGTCTTGTTGG 58.856 52.381 0.14 0.00 39.28 3.77
5661 6231 1.405391 GCAGAGCCAGAGGAAGAAGTC 60.405 57.143 0.00 0.00 0.00 3.01
5662 6232 0.612744 GCAGAGCCAGAGGAAGAAGT 59.387 55.000 0.00 0.00 0.00 3.01
5663 6233 3.457099 GCAGAGCCAGAGGAAGAAG 57.543 57.895 0.00 0.00 0.00 2.85
5675 6245 1.722636 GCAACATAGCCTGGCAGAGC 61.723 60.000 22.65 17.37 0.00 4.09
5676 6246 0.107312 AGCAACATAGCCTGGCAGAG 60.107 55.000 22.65 11.88 34.23 3.35
5677 6247 0.107508 GAGCAACATAGCCTGGCAGA 60.108 55.000 22.65 8.75 34.23 4.26
5678 6248 1.434622 CGAGCAACATAGCCTGGCAG 61.435 60.000 22.65 7.75 34.23 4.85
5679 6249 1.450134 CGAGCAACATAGCCTGGCA 60.450 57.895 22.65 7.39 34.23 4.92
5680 6250 2.828128 GCGAGCAACATAGCCTGGC 61.828 63.158 11.65 11.65 34.23 4.85
5681 6251 2.182842 GGCGAGCAACATAGCCTGG 61.183 63.158 0.00 0.00 45.67 4.45
5682 6252 3.414272 GGCGAGCAACATAGCCTG 58.586 61.111 0.00 0.00 45.67 4.85
5685 6255 2.096713 CGATTTAGGCGAGCAACATAGC 60.097 50.000 0.00 0.00 0.00 2.97
5686 6256 2.476619 CCGATTTAGGCGAGCAACATAG 59.523 50.000 0.00 0.00 0.00 2.23
5687 6257 2.479837 CCGATTTAGGCGAGCAACATA 58.520 47.619 0.00 0.00 0.00 2.29
5688 6258 1.299541 CCGATTTAGGCGAGCAACAT 58.700 50.000 0.00 0.00 0.00 2.71
5689 6259 2.762360 CCGATTTAGGCGAGCAACA 58.238 52.632 0.00 0.00 0.00 3.33
5698 6268 6.867662 AGAAGTTATTGATGCCGATTTAGG 57.132 37.500 0.00 0.00 0.00 2.69
5699 6269 8.376203 CGATAGAAGTTATTGATGCCGATTTAG 58.624 37.037 0.00 0.00 39.76 1.85
5700 6270 7.870954 ACGATAGAAGTTATTGATGCCGATTTA 59.129 33.333 0.00 0.00 41.38 1.40
5701 6271 6.706270 ACGATAGAAGTTATTGATGCCGATTT 59.294 34.615 0.00 0.00 41.38 2.17
5702 6272 6.223852 ACGATAGAAGTTATTGATGCCGATT 58.776 36.000 0.00 0.00 41.38 3.34
5703 6273 5.784177 ACGATAGAAGTTATTGATGCCGAT 58.216 37.500 0.00 0.00 41.38 4.18
5704 6274 5.196341 ACGATAGAAGTTATTGATGCCGA 57.804 39.130 0.00 0.00 41.38 5.54
5705 6275 6.150318 AGTACGATAGAAGTTATTGATGCCG 58.850 40.000 0.00 0.00 41.38 5.69
5706 6276 7.148950 CGAAGTACGATAGAAGTTATTGATGCC 60.149 40.741 0.00 0.00 45.77 4.40
5707 6277 7.590322 TCGAAGTACGATAGAAGTTATTGATGC 59.410 37.037 0.00 0.00 46.45 3.91
5722 6292 9.753591 CATTCCAATGAGAGGTCGAAGTACGAT 62.754 44.444 0.00 0.00 44.68 3.73
5723 6293 8.548987 CATTCCAATGAGAGGTCGAAGTACGA 62.549 46.154 0.00 0.00 42.68 3.43
5724 6294 2.422479 TCCAATGAGAGGTCGAAGTACG 59.578 50.000 0.00 0.00 44.09 3.67
5725 6295 4.451629 TTCCAATGAGAGGTCGAAGTAC 57.548 45.455 0.00 0.00 0.00 2.73
5726 6296 4.709886 TCATTCCAATGAGAGGTCGAAGTA 59.290 41.667 0.00 0.00 40.32 2.24
5727 6297 3.515502 TCATTCCAATGAGAGGTCGAAGT 59.484 43.478 0.00 0.00 40.32 3.01
5728 6298 3.868077 GTCATTCCAATGAGAGGTCGAAG 59.132 47.826 2.07 0.00 45.38 3.79
5729 6299 3.260632 TGTCATTCCAATGAGAGGTCGAA 59.739 43.478 2.07 0.00 45.38 3.71
5730 6300 2.831526 TGTCATTCCAATGAGAGGTCGA 59.168 45.455 2.07 0.00 45.38 4.20
5731 6301 3.251479 TGTCATTCCAATGAGAGGTCG 57.749 47.619 2.07 0.00 45.38 4.79
5732 6302 4.583871 ACTTGTCATTCCAATGAGAGGTC 58.416 43.478 8.01 0.00 42.62 3.85
5733 6303 4.647564 ACTTGTCATTCCAATGAGAGGT 57.352 40.909 8.01 8.01 45.38 3.85
5734 6304 4.157289 CCAACTTGTCATTCCAATGAGAGG 59.843 45.833 2.07 4.83 45.38 3.69
5735 6305 4.380233 GCCAACTTGTCATTCCAATGAGAG 60.380 45.833 2.07 6.64 45.38 3.20
5736 6306 3.507233 GCCAACTTGTCATTCCAATGAGA 59.493 43.478 2.07 0.00 45.38 3.27
5737 6307 3.508793 AGCCAACTTGTCATTCCAATGAG 59.491 43.478 2.07 0.00 45.38 2.90
5738 6308 3.499338 AGCCAACTTGTCATTCCAATGA 58.501 40.909 0.00 0.00 42.78 2.57
5739 6309 3.947910 AGCCAACTTGTCATTCCAATG 57.052 42.857 0.00 0.00 37.75 2.82
5740 6310 4.406456 TGTAGCCAACTTGTCATTCCAAT 58.594 39.130 0.00 0.00 0.00 3.16
5741 6311 3.826524 TGTAGCCAACTTGTCATTCCAA 58.173 40.909 0.00 0.00 0.00 3.53
5742 6312 3.500448 TGTAGCCAACTTGTCATTCCA 57.500 42.857 0.00 0.00 0.00 3.53
5743 6313 4.160736 GTTGTAGCCAACTTGTCATTCC 57.839 45.455 0.00 0.00 46.07 3.01
5751 6321 7.443272 AACTTATTAGTTCGTTGTAGCCAACTT 59.557 33.333 4.63 0.00 42.70 2.66
5752 6322 6.932960 AACTTATTAGTTCGTTGTAGCCAACT 59.067 34.615 4.63 0.00 42.70 3.16
5753 6323 6.716898 ACTTATTAGTTCGTTGTAGCCAAC 57.283 37.500 0.00 0.00 46.09 3.77
5754 6324 7.658575 AGAAACTTATTAGTTCGTTGTAGCCAA 59.341 33.333 0.00 0.00 43.74 4.52
5755 6325 7.156673 AGAAACTTATTAGTTCGTTGTAGCCA 58.843 34.615 0.00 0.00 43.74 4.75
5756 6326 7.544915 AGAGAAACTTATTAGTTCGTTGTAGCC 59.455 37.037 0.00 0.00 43.74 3.93
5757 6327 8.463456 AGAGAAACTTATTAGTTCGTTGTAGC 57.537 34.615 0.00 0.00 43.74 3.58
5760 6330 9.543783 AAGAAGAGAAACTTATTAGTTCGTTGT 57.456 29.630 0.00 0.00 43.74 3.32
5761 6331 9.798885 CAAGAAGAGAAACTTATTAGTTCGTTG 57.201 33.333 0.00 0.00 43.74 4.10
5762 6332 9.543783 ACAAGAAGAGAAACTTATTAGTTCGTT 57.456 29.630 0.00 0.00 43.74 3.85
5763 6333 9.194271 GACAAGAAGAGAAACTTATTAGTTCGT 57.806 33.333 0.00 0.00 43.74 3.85
5764 6334 9.193133 TGACAAGAAGAGAAACTTATTAGTTCG 57.807 33.333 0.00 0.00 43.74 3.95
5766 6336 9.274206 GGTGACAAGAAGAGAAACTTATTAGTT 57.726 33.333 0.00 0.00 46.44 2.24
5767 6337 8.652290 AGGTGACAAGAAGAGAAACTTATTAGT 58.348 33.333 0.00 0.00 37.86 2.24
5768 6338 9.495572 AAGGTGACAAGAAGAGAAACTTATTAG 57.504 33.333 0.00 0.00 37.86 1.73
5769 6339 9.490379 GAAGGTGACAAGAAGAGAAACTTATTA 57.510 33.333 0.00 0.00 37.86 0.98
5770 6340 8.214364 AGAAGGTGACAAGAAGAGAAACTTATT 58.786 33.333 0.00 0.00 40.11 1.40
5771 6341 7.740805 AGAAGGTGACAAGAAGAGAAACTTAT 58.259 34.615 0.00 0.00 39.13 1.73
5772 6342 7.125792 AGAAGGTGACAAGAAGAGAAACTTA 57.874 36.000 0.00 0.00 39.13 2.24
5773 6343 5.995446 AGAAGGTGACAAGAAGAGAAACTT 58.005 37.500 0.00 0.00 42.03 2.66
5774 6344 5.622346 AGAAGGTGACAAGAAGAGAAACT 57.378 39.130 0.00 0.00 0.00 2.66
5775 6345 6.685527 AAAGAAGGTGACAAGAAGAGAAAC 57.314 37.500 0.00 0.00 0.00 2.78
5776 6346 7.012421 GCTTAAAGAAGGTGACAAGAAGAGAAA 59.988 37.037 0.00 0.00 32.84 2.52
5777 6347 6.483640 GCTTAAAGAAGGTGACAAGAAGAGAA 59.516 38.462 0.00 0.00 32.84 2.87
5778 6348 5.992217 GCTTAAAGAAGGTGACAAGAAGAGA 59.008 40.000 0.00 0.00 32.84 3.10
5779 6349 5.180304 GGCTTAAAGAAGGTGACAAGAAGAG 59.820 44.000 0.00 0.00 32.84 2.85
5780 6350 5.063880 GGCTTAAAGAAGGTGACAAGAAGA 58.936 41.667 0.00 0.00 32.84 2.87
5781 6351 5.066593 AGGCTTAAAGAAGGTGACAAGAAG 58.933 41.667 0.00 0.00 32.84 2.85
5782 6352 5.048846 AGGCTTAAAGAAGGTGACAAGAA 57.951 39.130 0.00 0.00 32.84 2.52
5783 6353 4.706842 AGGCTTAAAGAAGGTGACAAGA 57.293 40.909 0.00 0.00 32.84 3.02
5784 6354 5.278512 GGAAAGGCTTAAAGAAGGTGACAAG 60.279 44.000 0.00 0.00 32.84 3.16
5785 6355 4.583073 GGAAAGGCTTAAAGAAGGTGACAA 59.417 41.667 0.00 0.00 32.84 3.18
5786 6356 4.141251 AGGAAAGGCTTAAAGAAGGTGACA 60.141 41.667 0.00 0.00 32.84 3.58
5787 6357 4.399219 AGGAAAGGCTTAAAGAAGGTGAC 58.601 43.478 0.00 0.00 32.84 3.67
5788 6358 4.724279 AGGAAAGGCTTAAAGAAGGTGA 57.276 40.909 0.00 0.00 32.84 4.02
5789 6359 5.048434 CAGAAGGAAAGGCTTAAAGAAGGTG 60.048 44.000 0.00 0.00 32.84 4.00
5790 6360 5.073428 CAGAAGGAAAGGCTTAAAGAAGGT 58.927 41.667 0.00 0.00 32.84 3.50
5791 6361 4.082517 GCAGAAGGAAAGGCTTAAAGAAGG 60.083 45.833 0.00 0.00 32.84 3.46
5792 6362 4.764308 AGCAGAAGGAAAGGCTTAAAGAAG 59.236 41.667 0.00 0.00 31.34 2.85
5793 6363 4.729868 AGCAGAAGGAAAGGCTTAAAGAA 58.270 39.130 0.00 0.00 31.34 2.52
5794 6364 4.373156 AGCAGAAGGAAAGGCTTAAAGA 57.627 40.909 0.00 0.00 31.34 2.52
5795 6365 4.082517 GGAAGCAGAAGGAAAGGCTTAAAG 60.083 45.833 0.00 0.00 45.81 1.85
5796 6366 3.826729 GGAAGCAGAAGGAAAGGCTTAAA 59.173 43.478 0.00 0.00 45.81 1.52
5797 6367 3.181434 TGGAAGCAGAAGGAAAGGCTTAA 60.181 43.478 0.00 0.00 45.81 1.85
5798 6368 2.375174 TGGAAGCAGAAGGAAAGGCTTA 59.625 45.455 0.00 0.00 45.81 3.09
5800 6370 0.773644 TGGAAGCAGAAGGAAAGGCT 59.226 50.000 0.00 0.00 38.45 4.58
5801 6371 1.747924 GATGGAAGCAGAAGGAAAGGC 59.252 52.381 0.00 0.00 0.00 4.35
5802 6372 2.012673 CGATGGAAGCAGAAGGAAAGG 58.987 52.381 0.00 0.00 0.00 3.11
5803 6373 2.935201 CTCGATGGAAGCAGAAGGAAAG 59.065 50.000 0.00 0.00 0.00 2.62
5804 6374 2.567169 TCTCGATGGAAGCAGAAGGAAA 59.433 45.455 0.00 0.00 0.00 3.13
5805 6375 2.179427 TCTCGATGGAAGCAGAAGGAA 58.821 47.619 0.00 0.00 0.00 3.36
5806 6376 1.852633 TCTCGATGGAAGCAGAAGGA 58.147 50.000 0.00 0.00 0.00 3.36
5807 6377 2.680312 TTCTCGATGGAAGCAGAAGG 57.320 50.000 0.00 0.00 0.00 3.46
5808 6378 9.814899 ATATATATTTCTCGATGGAAGCAGAAG 57.185 33.333 0.00 0.00 0.00 2.85
5833 6403 9.482627 CTTAATCGCTTCTCCAAACTTATCTAT 57.517 33.333 0.00 0.00 0.00 1.98
5834 6404 7.926555 CCTTAATCGCTTCTCCAAACTTATCTA 59.073 37.037 0.00 0.00 0.00 1.98
5835 6405 6.763610 CCTTAATCGCTTCTCCAAACTTATCT 59.236 38.462 0.00 0.00 0.00 1.98
5836 6406 6.539103 ACCTTAATCGCTTCTCCAAACTTATC 59.461 38.462 0.00 0.00 0.00 1.75
5837 6407 6.316390 CACCTTAATCGCTTCTCCAAACTTAT 59.684 38.462 0.00 0.00 0.00 1.73
5838 6408 5.642063 CACCTTAATCGCTTCTCCAAACTTA 59.358 40.000 0.00 0.00 0.00 2.24
5839 6409 4.455877 CACCTTAATCGCTTCTCCAAACTT 59.544 41.667 0.00 0.00 0.00 2.66
5840 6410 4.003648 CACCTTAATCGCTTCTCCAAACT 58.996 43.478 0.00 0.00 0.00 2.66
5841 6411 3.751698 ACACCTTAATCGCTTCTCCAAAC 59.248 43.478 0.00 0.00 0.00 2.93
5842 6412 4.015872 ACACCTTAATCGCTTCTCCAAA 57.984 40.909 0.00 0.00 0.00 3.28
5843 6413 3.695830 ACACCTTAATCGCTTCTCCAA 57.304 42.857 0.00 0.00 0.00 3.53
5844 6414 3.695830 AACACCTTAATCGCTTCTCCA 57.304 42.857 0.00 0.00 0.00 3.86
5845 6415 3.374367 GGAAACACCTTAATCGCTTCTCC 59.626 47.826 0.00 0.00 35.41 3.71
5846 6416 4.000988 TGGAAACACCTTAATCGCTTCTC 58.999 43.478 0.00 0.00 39.86 2.87
5847 6417 4.015872 TGGAAACACCTTAATCGCTTCT 57.984 40.909 0.00 0.00 39.86 2.85
5861 6431 5.105567 TGAACAACCTAAGAGTGGAAACA 57.894 39.130 0.00 0.00 38.70 2.83
5862 6432 6.635030 ATTGAACAACCTAAGAGTGGAAAC 57.365 37.500 0.00 0.00 0.00 2.78
5863 6433 7.094377 GCATATTGAACAACCTAAGAGTGGAAA 60.094 37.037 0.00 0.00 0.00 3.13
5864 6434 6.374333 GCATATTGAACAACCTAAGAGTGGAA 59.626 38.462 0.00 0.00 0.00 3.53
5865 6435 5.880332 GCATATTGAACAACCTAAGAGTGGA 59.120 40.000 0.00 0.00 0.00 4.02
5866 6436 5.647658 TGCATATTGAACAACCTAAGAGTGG 59.352 40.000 0.00 0.00 0.00 4.00
5867 6437 6.741992 TGCATATTGAACAACCTAAGAGTG 57.258 37.500 0.00 0.00 0.00 3.51
5868 6438 7.665559 TCTTTGCATATTGAACAACCTAAGAGT 59.334 33.333 0.00 0.00 0.00 3.24
5869 6439 7.965107 GTCTTTGCATATTGAACAACCTAAGAG 59.035 37.037 0.00 0.00 0.00 2.85
5870 6440 7.094377 GGTCTTTGCATATTGAACAACCTAAGA 60.094 37.037 0.00 0.00 0.00 2.10
5871 6441 7.029563 GGTCTTTGCATATTGAACAACCTAAG 58.970 38.462 0.00 0.00 0.00 2.18
5872 6442 6.348950 CGGTCTTTGCATATTGAACAACCTAA 60.349 38.462 0.00 0.00 0.00 2.69
5873 6443 5.123186 CGGTCTTTGCATATTGAACAACCTA 59.877 40.000 0.00 0.00 0.00 3.08
5874 6444 4.082787 CGGTCTTTGCATATTGAACAACCT 60.083 41.667 0.00 0.00 0.00 3.50
5875 6445 4.165779 CGGTCTTTGCATATTGAACAACC 58.834 43.478 0.00 0.00 0.00 3.77
5876 6446 4.616802 CACGGTCTTTGCATATTGAACAAC 59.383 41.667 0.00 0.00 0.00 3.32
5877 6447 4.277174 ACACGGTCTTTGCATATTGAACAA 59.723 37.500 0.00 0.00 0.00 2.83
5878 6448 3.818210 ACACGGTCTTTGCATATTGAACA 59.182 39.130 0.00 0.00 0.00 3.18
5879 6449 4.083537 TGACACGGTCTTTGCATATTGAAC 60.084 41.667 0.00 0.00 33.15 3.18
5880 6450 4.068599 TGACACGGTCTTTGCATATTGAA 58.931 39.130 0.00 0.00 33.15 2.69
5881 6451 3.669536 TGACACGGTCTTTGCATATTGA 58.330 40.909 0.00 0.00 33.15 2.57
5882 6452 4.418013 TTGACACGGTCTTTGCATATTG 57.582 40.909 0.00 0.00 33.15 1.90
5883 6453 4.699735 TGATTGACACGGTCTTTGCATATT 59.300 37.500 0.00 0.00 33.15 1.28
5884 6454 4.094887 GTGATTGACACGGTCTTTGCATAT 59.905 41.667 0.00 0.00 39.78 1.78
5885 6455 3.435327 GTGATTGACACGGTCTTTGCATA 59.565 43.478 0.00 0.00 39.78 3.14
5886 6456 2.226437 GTGATTGACACGGTCTTTGCAT 59.774 45.455 0.00 0.00 39.78 3.96
5887 6457 1.601903 GTGATTGACACGGTCTTTGCA 59.398 47.619 5.77 0.00 39.78 4.08
5888 6458 2.316119 GTGATTGACACGGTCTTTGC 57.684 50.000 5.77 0.00 39.78 3.68
5906 6476 4.243270 GCTTTTCGTATCACTGGTGTAGT 58.757 43.478 0.53 0.00 41.36 2.73
5907 6477 4.242475 TGCTTTTCGTATCACTGGTGTAG 58.758 43.478 0.53 0.00 0.00 2.74
5908 6478 4.260139 TGCTTTTCGTATCACTGGTGTA 57.740 40.909 0.53 0.00 0.00 2.90
5909 6479 3.120321 TGCTTTTCGTATCACTGGTGT 57.880 42.857 0.53 0.00 0.00 4.16
5910 6480 3.667960 GCTTGCTTTTCGTATCACTGGTG 60.668 47.826 0.00 0.00 0.00 4.17
5911 6481 2.484264 GCTTGCTTTTCGTATCACTGGT 59.516 45.455 0.00 0.00 0.00 4.00
5912 6482 2.483877 TGCTTGCTTTTCGTATCACTGG 59.516 45.455 0.00 0.00 0.00 4.00
5913 6483 3.811722 TGCTTGCTTTTCGTATCACTG 57.188 42.857 0.00 0.00 0.00 3.66
5914 6484 4.697352 AGAATGCTTGCTTTTCGTATCACT 59.303 37.500 0.00 0.00 0.00 3.41
5915 6485 4.974591 AGAATGCTTGCTTTTCGTATCAC 58.025 39.130 0.00 0.00 0.00 3.06
5916 6486 5.412594 AGAAGAATGCTTGCTTTTCGTATCA 59.587 36.000 0.00 0.00 33.61 2.15
5917 6487 5.873732 AGAAGAATGCTTGCTTTTCGTATC 58.126 37.500 0.00 1.12 33.61 2.24
5918 6488 5.163713 GGAGAAGAATGCTTGCTTTTCGTAT 60.164 40.000 0.00 0.00 33.61 3.06
5919 6489 4.154195 GGAGAAGAATGCTTGCTTTTCGTA 59.846 41.667 0.00 0.00 33.61 3.43
5920 6490 3.057946 GGAGAAGAATGCTTGCTTTTCGT 60.058 43.478 0.00 0.00 33.61 3.85
5921 6491 3.058016 TGGAGAAGAATGCTTGCTTTTCG 60.058 43.478 0.00 0.00 33.61 3.46
5922 6492 4.483311 CTGGAGAAGAATGCTTGCTTTTC 58.517 43.478 0.00 2.95 33.61 2.29
5923 6493 3.305881 GCTGGAGAAGAATGCTTGCTTTT 60.306 43.478 0.00 0.00 33.61 2.27
5924 6494 2.230750 GCTGGAGAAGAATGCTTGCTTT 59.769 45.455 0.00 0.00 33.61 3.51
5925 6495 1.817447 GCTGGAGAAGAATGCTTGCTT 59.183 47.619 0.00 0.00 33.61 3.91
5926 6496 1.004511 AGCTGGAGAAGAATGCTTGCT 59.995 47.619 0.00 0.00 33.61 3.91
5927 6497 1.132643 CAGCTGGAGAAGAATGCTTGC 59.867 52.381 5.57 0.00 33.61 4.01
5928 6498 2.419324 GTCAGCTGGAGAAGAATGCTTG 59.581 50.000 15.13 0.00 33.61 4.01
5929 6499 2.709213 GTCAGCTGGAGAAGAATGCTT 58.291 47.619 15.13 0.00 36.96 3.91
5930 6500 1.405256 CGTCAGCTGGAGAAGAATGCT 60.405 52.381 15.13 0.00 0.00 3.79
5931 6501 1.005340 CGTCAGCTGGAGAAGAATGC 58.995 55.000 15.13 0.00 0.00 3.56
5932 6502 2.376808 ACGTCAGCTGGAGAAGAATG 57.623 50.000 15.13 0.06 0.00 2.67
5933 6503 2.159366 CGTACGTCAGCTGGAGAAGAAT 60.159 50.000 15.13 0.00 0.00 2.40
5934 6504 1.199327 CGTACGTCAGCTGGAGAAGAA 59.801 52.381 15.13 0.00 0.00 2.52
5935 6505 0.803117 CGTACGTCAGCTGGAGAAGA 59.197 55.000 15.13 0.00 0.00 2.87
5936 6506 0.179161 CCGTACGTCAGCTGGAGAAG 60.179 60.000 15.13 0.00 0.00 2.85
5937 6507 0.607217 TCCGTACGTCAGCTGGAGAA 60.607 55.000 15.13 0.00 0.00 2.87
5938 6508 1.002990 TCCGTACGTCAGCTGGAGA 60.003 57.895 15.13 0.00 0.00 3.71
5939 6509 1.136984 GTCCGTACGTCAGCTGGAG 59.863 63.158 15.13 10.77 0.00 3.86
5940 6510 2.683859 CGTCCGTACGTCAGCTGGA 61.684 63.158 15.13 0.00 44.21 3.86
5941 6511 2.202440 CGTCCGTACGTCAGCTGG 60.202 66.667 15.13 0.36 44.21 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.