Multiple sequence alignment - TraesCS6B01G330900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G330900 chr6B 100.000 3425 0 0 2287 5711 581081249 581077825 0.000000e+00 6325.0
1 TraesCS6B01G330900 chr6B 100.000 1993 0 0 1 1993 581083535 581081543 0.000000e+00 3681.0
2 TraesCS6B01G330900 chr6B 93.134 335 21 2 1 334 581189918 581189585 1.850000e-134 490.0
3 TraesCS6B01G330900 chr6B 91.071 336 25 5 1 334 276981562 276981894 3.140000e-122 449.0
4 TraesCS6B01G330900 chr6D 89.201 2102 78 56 2287 4297 388539668 388537625 0.000000e+00 2486.0
5 TraesCS6B01G330900 chr6D 93.176 1612 61 22 392 1980 388541247 388539662 0.000000e+00 2322.0
6 TraesCS6B01G330900 chr6D 85.656 1478 63 42 4286 5711 388537607 388536227 0.000000e+00 1417.0
7 TraesCS6B01G330900 chr6A 93.762 1571 69 18 438 1993 535155421 535153865 0.000000e+00 2331.0
8 TraesCS6B01G330900 chr6A 90.688 1729 71 29 2287 3962 535153836 535152145 0.000000e+00 2218.0
9 TraesCS6B01G330900 chr6A 87.802 1738 81 53 4038 5711 535143305 535141635 0.000000e+00 1914.0
10 TraesCS6B01G330900 chr3B 91.642 335 27 1 1 334 249294807 249295141 4.030000e-126 462.0
11 TraesCS6B01G330900 chr3B 91.071 336 28 2 1 334 425332416 425332081 2.430000e-123 453.0
12 TraesCS6B01G330900 chr2B 91.642 335 27 1 1 334 527511028 527511362 4.030000e-126 462.0
13 TraesCS6B01G330900 chr3D 91.343 335 28 1 1 334 238027454 238027788 1.880000e-124 457.0
14 TraesCS6B01G330900 chr5B 90.828 338 28 3 1 335 244415524 244415187 3.140000e-122 449.0
15 TraesCS6B01G330900 chr5B 91.045 335 25 3 1 334 503180530 503180200 1.130000e-121 448.0
16 TraesCS6B01G330900 chr5B 86.432 199 27 0 3424 3622 348448560 348448362 9.630000e-53 219.0
17 TraesCS6B01G330900 chr5B 85.350 157 23 0 1609 1765 348449877 348449721 4.580000e-36 163.0
18 TraesCS6B01G330900 chr5B 90.000 80 8 0 1874 1953 348449619 348449540 2.810000e-18 104.0
19 TraesCS6B01G330900 chr5B 95.652 46 2 0 2389 2434 348449417 348449372 2.210000e-09 75.0
20 TraesCS6B01G330900 chr5B 100.000 31 0 0 5681 5711 710457370 710457400 2.220000e-04 58.4
21 TraesCS6B01G330900 chr7B 90.560 339 30 2 1 337 231132216 231131878 1.130000e-121 448.0
22 TraesCS6B01G330900 chr7B 85.185 108 16 0 2728 2835 97973878 97973771 1.680000e-20 111.0
23 TraesCS6B01G330900 chr5D 85.930 199 28 0 3424 3622 303759417 303759219 4.480000e-51 213.0
24 TraesCS6B01G330900 chr5D 85.350 157 23 0 1609 1765 303760733 303760577 4.580000e-36 163.0
25 TraesCS6B01G330900 chr5D 93.750 48 2 1 2389 2436 303760269 303760223 2.850000e-08 71.3
26 TraesCS6B01G330900 chr5A 85.427 199 29 0 3424 3622 394181648 394181450 2.090000e-49 207.0
27 TraesCS6B01G330900 chr5A 86.076 158 21 1 1606 1762 394182970 394182813 9.840000e-38 169.0
28 TraesCS6B01G330900 chr5A 93.750 48 2 1 2389 2436 394182517 394182471 2.850000e-08 71.3
29 TraesCS6B01G330900 chr2D 83.495 103 17 0 1649 1751 112180685 112180583 4.710000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G330900 chr6B 581077825 581083535 5710 True 5003.0 6325 100.000000 1 5711 2 chr6B.!!$R2 5710
1 TraesCS6B01G330900 chr6D 388536227 388541247 5020 True 2075.0 2486 89.344333 392 5711 3 chr6D.!!$R1 5319
2 TraesCS6B01G330900 chr6A 535152145 535155421 3276 True 2274.5 2331 92.225000 438 3962 2 chr6A.!!$R2 3524
3 TraesCS6B01G330900 chr6A 535141635 535143305 1670 True 1914.0 1914 87.802000 4038 5711 1 chr6A.!!$R1 1673

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
80 81 0.033504 TCACCCGAGCTCAAGAACAC 59.966 55.0 15.40 0.00 0.00 3.32 F
195 196 0.034863 GTGGCCCGAACCAGGATAAA 60.035 55.0 0.00 0.00 41.46 1.40 F
196 197 0.034863 TGGCCCGAACCAGGATAAAC 60.035 55.0 0.00 0.00 33.75 2.01 F
285 286 0.037326 GGTTGAGATCTCCACACGCA 60.037 55.0 24.00 1.92 0.00 5.24 F
371 372 0.104855 GGGATGAGCGTATGTGAGCA 59.895 55.0 0.00 0.00 35.48 4.26 F
2333 2361 0.247419 GTGAGTGCGCGTGATGATTG 60.247 55.0 8.43 0.00 0.00 2.67 F
3335 3440 0.034337 TCGGTCCCGGTTTCTTTCTG 59.966 55.0 5.80 0.00 40.25 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1961 1989 0.534873 GAGAGAGAGGTGAAGTGGCC 59.465 60.000 0.00 0.00 0.00 5.36 R
2296 2324 0.179108 ACGGGCTAGTCGCTTGATTC 60.179 55.000 7.38 0.00 39.13 2.52 R
2297 2325 0.460284 CACGGGCTAGTCGCTTGATT 60.460 55.000 7.38 0.00 39.13 2.57 R
2333 2361 1.195674 GCGAGAACAAAGCCAGAGTTC 59.804 52.381 0.00 0.00 41.37 3.01 R
2429 2457 1.458639 GGCATACATTGGAGCCTGGC 61.459 60.000 11.65 11.65 43.70 4.85 R
3689 3800 0.175760 GGCGTCTTGGATCTGTGCTA 59.824 55.000 0.00 0.00 0.00 3.49 R
4900 5119 0.178767 ACACTGTCACTGAGCAGCAA 59.821 50.000 0.00 0.00 36.26 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.859165 TAGCCACCACCAAAGAAGAG 57.141 50.000 0.00 0.00 0.00 2.85
20 21 0.111253 AGCCACCACCAAAGAAGAGG 59.889 55.000 0.00 0.00 0.00 3.69
21 22 0.110486 GCCACCACCAAAGAAGAGGA 59.890 55.000 0.00 0.00 0.00 3.71
22 23 1.897560 CCACCACCAAAGAAGAGGAC 58.102 55.000 0.00 0.00 0.00 3.85
23 24 1.512926 CACCACCAAAGAAGAGGACG 58.487 55.000 0.00 0.00 0.00 4.79
24 25 0.396811 ACCACCAAAGAAGAGGACGG 59.603 55.000 0.00 0.00 0.00 4.79
25 26 0.685097 CCACCAAAGAAGAGGACGGA 59.315 55.000 0.00 0.00 0.00 4.69
26 27 1.279271 CCACCAAAGAAGAGGACGGAT 59.721 52.381 0.00 0.00 0.00 4.18
27 28 2.622436 CACCAAAGAAGAGGACGGATC 58.378 52.381 0.00 0.00 0.00 3.36
28 29 1.555533 ACCAAAGAAGAGGACGGATCC 59.444 52.381 0.00 0.00 46.69 3.36
55 56 3.861341 CGAAGCCATTCCTCCTTCA 57.139 52.632 0.00 0.00 35.80 3.02
56 57 1.373570 CGAAGCCATTCCTCCTTCAC 58.626 55.000 0.00 0.00 35.80 3.18
57 58 1.756430 GAAGCCATTCCTCCTTCACC 58.244 55.000 0.00 0.00 36.03 4.02
58 59 1.004745 GAAGCCATTCCTCCTTCACCA 59.995 52.381 0.00 0.00 36.03 4.17
59 60 0.622665 AGCCATTCCTCCTTCACCAG 59.377 55.000 0.00 0.00 0.00 4.00
60 61 1.034292 GCCATTCCTCCTTCACCAGC 61.034 60.000 0.00 0.00 0.00 4.85
61 62 0.622665 CCATTCCTCCTTCACCAGCT 59.377 55.000 0.00 0.00 0.00 4.24
62 63 1.407989 CCATTCCTCCTTCACCAGCTC 60.408 57.143 0.00 0.00 0.00 4.09
63 64 1.280133 CATTCCTCCTTCACCAGCTCA 59.720 52.381 0.00 0.00 0.00 4.26
64 65 0.687354 TTCCTCCTTCACCAGCTCAC 59.313 55.000 0.00 0.00 0.00 3.51
65 66 1.194781 TCCTCCTTCACCAGCTCACC 61.195 60.000 0.00 0.00 0.00 4.02
66 67 1.298014 CTCCTTCACCAGCTCACCC 59.702 63.158 0.00 0.00 0.00 4.61
67 68 2.046892 CCTTCACCAGCTCACCCG 60.047 66.667 0.00 0.00 0.00 5.28
68 69 2.583441 CCTTCACCAGCTCACCCGA 61.583 63.158 0.00 0.00 0.00 5.14
69 70 1.079543 CTTCACCAGCTCACCCGAG 60.080 63.158 0.00 0.00 42.66 4.63
78 79 3.129792 CTCACCCGAGCTCAAGAAC 57.870 57.895 15.40 0.00 31.00 3.01
79 80 0.318441 CTCACCCGAGCTCAAGAACA 59.682 55.000 15.40 0.00 31.00 3.18
80 81 0.033504 TCACCCGAGCTCAAGAACAC 59.966 55.000 15.40 0.00 0.00 3.32
81 82 0.951040 CACCCGAGCTCAAGAACACC 60.951 60.000 15.40 0.00 0.00 4.16
82 83 1.122019 ACCCGAGCTCAAGAACACCT 61.122 55.000 15.40 0.00 0.00 4.00
83 84 0.390472 CCCGAGCTCAAGAACACCTC 60.390 60.000 15.40 0.00 0.00 3.85
84 85 0.318441 CCGAGCTCAAGAACACCTCA 59.682 55.000 15.40 0.00 0.00 3.86
85 86 1.066573 CCGAGCTCAAGAACACCTCAT 60.067 52.381 15.40 0.00 0.00 2.90
86 87 2.266554 CGAGCTCAAGAACACCTCATC 58.733 52.381 15.40 0.00 0.00 2.92
87 88 2.094286 CGAGCTCAAGAACACCTCATCT 60.094 50.000 15.40 0.00 0.00 2.90
88 89 3.520569 GAGCTCAAGAACACCTCATCTC 58.479 50.000 9.40 0.00 0.00 2.75
89 90 3.172339 AGCTCAAGAACACCTCATCTCT 58.828 45.455 0.00 0.00 0.00 3.10
90 91 3.582208 AGCTCAAGAACACCTCATCTCTT 59.418 43.478 0.00 0.00 0.00 2.85
91 92 3.683822 GCTCAAGAACACCTCATCTCTTG 59.316 47.826 4.63 4.63 43.97 3.02
101 102 3.606595 CTCATCTCTTGAGGCTGTTCA 57.393 47.619 0.00 0.00 46.89 3.18
102 103 4.139859 CTCATCTCTTGAGGCTGTTCAT 57.860 45.455 0.00 0.00 46.89 2.57
103 104 4.121317 CTCATCTCTTGAGGCTGTTCATC 58.879 47.826 0.00 0.00 46.89 2.92
104 105 3.118482 TCATCTCTTGAGGCTGTTCATCC 60.118 47.826 0.00 0.00 0.00 3.51
105 106 2.259917 TCTCTTGAGGCTGTTCATCCA 58.740 47.619 0.00 0.00 0.00 3.41
106 107 2.027745 TCTCTTGAGGCTGTTCATCCAC 60.028 50.000 0.00 0.00 0.00 4.02
107 108 1.980765 TCTTGAGGCTGTTCATCCACT 59.019 47.619 0.00 0.00 0.00 4.00
108 109 2.082231 CTTGAGGCTGTTCATCCACTG 58.918 52.381 0.00 0.00 0.00 3.66
109 110 1.059098 TGAGGCTGTTCATCCACTGT 58.941 50.000 0.00 0.00 0.00 3.55
110 111 2.256306 TGAGGCTGTTCATCCACTGTA 58.744 47.619 0.00 0.00 0.00 2.74
111 112 2.028112 TGAGGCTGTTCATCCACTGTAC 60.028 50.000 0.00 0.00 0.00 2.90
112 113 2.234908 GAGGCTGTTCATCCACTGTACT 59.765 50.000 0.00 0.00 0.00 2.73
113 114 3.441101 AGGCTGTTCATCCACTGTACTA 58.559 45.455 0.00 0.00 0.00 1.82
114 115 3.449018 AGGCTGTTCATCCACTGTACTAG 59.551 47.826 0.00 0.00 0.00 2.57
115 116 3.195825 GGCTGTTCATCCACTGTACTAGT 59.804 47.826 0.00 0.00 41.36 2.57
116 117 4.322801 GGCTGTTCATCCACTGTACTAGTT 60.323 45.833 0.00 0.00 37.60 2.24
117 118 4.865365 GCTGTTCATCCACTGTACTAGTTC 59.135 45.833 0.00 0.00 37.60 3.01
118 119 5.566826 GCTGTTCATCCACTGTACTAGTTCA 60.567 44.000 0.00 0.29 37.60 3.18
119 120 6.605471 TGTTCATCCACTGTACTAGTTCAT 57.395 37.500 0.00 0.00 37.60 2.57
120 121 6.631016 TGTTCATCCACTGTACTAGTTCATC 58.369 40.000 0.00 0.00 37.60 2.92
121 122 5.854010 TCATCCACTGTACTAGTTCATCC 57.146 43.478 0.00 0.00 37.60 3.51
122 123 5.519808 TCATCCACTGTACTAGTTCATCCT 58.480 41.667 0.00 0.00 37.60 3.24
123 124 5.594725 TCATCCACTGTACTAGTTCATCCTC 59.405 44.000 0.00 0.00 37.60 3.71
124 125 4.930696 TCCACTGTACTAGTTCATCCTCA 58.069 43.478 0.00 0.00 37.60 3.86
125 126 4.950475 TCCACTGTACTAGTTCATCCTCAG 59.050 45.833 0.00 2.24 37.60 3.35
126 127 4.440802 CCACTGTACTAGTTCATCCTCAGC 60.441 50.000 0.00 0.00 37.60 4.26
127 128 3.702045 ACTGTACTAGTTCATCCTCAGCC 59.298 47.826 0.00 0.00 35.67 4.85
128 129 3.031736 TGTACTAGTTCATCCTCAGCCC 58.968 50.000 0.00 0.00 0.00 5.19
129 130 1.501582 ACTAGTTCATCCTCAGCCCC 58.498 55.000 0.00 0.00 0.00 5.80
130 131 1.008938 ACTAGTTCATCCTCAGCCCCT 59.991 52.381 0.00 0.00 0.00 4.79
131 132 1.691434 CTAGTTCATCCTCAGCCCCTC 59.309 57.143 0.00 0.00 0.00 4.30
132 133 1.144936 GTTCATCCTCAGCCCCTCG 59.855 63.158 0.00 0.00 0.00 4.63
133 134 1.001631 TTCATCCTCAGCCCCTCGA 59.998 57.895 0.00 0.00 0.00 4.04
134 135 1.045350 TTCATCCTCAGCCCCTCGAG 61.045 60.000 5.13 5.13 0.00 4.04
143 144 2.190578 CCCCTCGAGGCAATCCAC 59.809 66.667 26.87 0.00 33.74 4.02
144 145 2.190578 CCCTCGAGGCAATCCACC 59.809 66.667 26.87 0.00 33.74 4.61
145 146 2.669133 CCCTCGAGGCAATCCACCA 61.669 63.158 26.87 0.00 33.74 4.17
146 147 1.299648 CCTCGAGGCAATCCACCAA 59.700 57.895 20.67 0.00 33.74 3.67
147 148 0.322456 CCTCGAGGCAATCCACCAAA 60.322 55.000 20.67 0.00 33.74 3.28
148 149 1.533625 CTCGAGGCAATCCACCAAAA 58.466 50.000 3.91 0.00 33.74 2.44
149 150 1.470098 CTCGAGGCAATCCACCAAAAG 59.530 52.381 3.91 0.00 33.74 2.27
150 151 0.527565 CGAGGCAATCCACCAAAAGG 59.472 55.000 0.00 0.00 33.74 3.11
151 152 0.247460 GAGGCAATCCACCAAAAGGC 59.753 55.000 0.00 0.00 33.74 4.35
152 153 0.178924 AGGCAATCCACCAAAAGGCT 60.179 50.000 0.00 0.00 33.74 4.58
153 154 0.037046 GGCAATCCACCAAAAGGCTG 60.037 55.000 0.00 0.00 0.00 4.85
154 155 0.037046 GCAATCCACCAAAAGGCTGG 60.037 55.000 0.00 0.00 42.68 4.85
155 156 1.631405 CAATCCACCAAAAGGCTGGA 58.369 50.000 0.00 7.82 38.96 3.86
156 157 1.547372 CAATCCACCAAAAGGCTGGAG 59.453 52.381 0.00 0.00 38.96 3.86
157 158 0.779997 ATCCACCAAAAGGCTGGAGT 59.220 50.000 0.00 0.00 38.96 3.85
158 159 1.440618 TCCACCAAAAGGCTGGAGTA 58.559 50.000 0.00 0.00 38.96 2.59
159 160 1.351017 TCCACCAAAAGGCTGGAGTAG 59.649 52.381 0.00 0.00 38.96 2.57
160 161 1.614317 CCACCAAAAGGCTGGAGTAGG 60.614 57.143 0.00 0.00 38.96 3.18
161 162 0.698818 ACCAAAAGGCTGGAGTAGGG 59.301 55.000 0.00 0.00 38.96 3.53
162 163 0.698818 CCAAAAGGCTGGAGTAGGGT 59.301 55.000 0.00 0.00 38.96 4.34
163 164 1.913419 CCAAAAGGCTGGAGTAGGGTA 59.087 52.381 0.00 0.00 38.96 3.69
164 165 2.509964 CCAAAAGGCTGGAGTAGGGTAT 59.490 50.000 0.00 0.00 38.96 2.73
165 166 3.053619 CCAAAAGGCTGGAGTAGGGTATT 60.054 47.826 0.00 0.00 38.96 1.89
166 167 4.165372 CCAAAAGGCTGGAGTAGGGTATTA 59.835 45.833 0.00 0.00 38.96 0.98
167 168 5.123936 CAAAAGGCTGGAGTAGGGTATTAC 58.876 45.833 0.00 0.00 0.00 1.89
168 169 3.700863 AGGCTGGAGTAGGGTATTACA 57.299 47.619 0.00 0.00 0.00 2.41
169 170 3.306613 AGGCTGGAGTAGGGTATTACAC 58.693 50.000 0.00 0.00 0.00 2.90
188 189 4.966787 GCAAGGTGGCCCGAACCA 62.967 66.667 12.97 0.00 40.40 3.67
189 190 2.672996 CAAGGTGGCCCGAACCAG 60.673 66.667 12.97 1.71 41.46 4.00
190 191 3.966543 AAGGTGGCCCGAACCAGG 61.967 66.667 12.97 0.00 41.46 4.45
191 192 4.974438 AGGTGGCCCGAACCAGGA 62.974 66.667 12.97 0.00 41.46 3.86
192 193 3.728373 GGTGGCCCGAACCAGGAT 61.728 66.667 0.00 0.00 41.46 3.24
193 194 2.372074 GGTGGCCCGAACCAGGATA 61.372 63.158 0.00 0.00 41.46 2.59
194 195 1.605453 GTGGCCCGAACCAGGATAA 59.395 57.895 0.00 0.00 41.46 1.75
195 196 0.034863 GTGGCCCGAACCAGGATAAA 60.035 55.000 0.00 0.00 41.46 1.40
196 197 0.034863 TGGCCCGAACCAGGATAAAC 60.035 55.000 0.00 0.00 33.75 2.01
197 198 0.255033 GGCCCGAACCAGGATAAACT 59.745 55.000 0.00 0.00 0.00 2.66
198 199 1.379527 GCCCGAACCAGGATAAACTG 58.620 55.000 0.00 0.00 38.21 3.16
199 200 1.339727 GCCCGAACCAGGATAAACTGT 60.340 52.381 0.00 0.00 36.75 3.55
200 201 2.878526 GCCCGAACCAGGATAAACTGTT 60.879 50.000 0.00 0.00 36.75 3.16
201 202 2.747446 CCCGAACCAGGATAAACTGTTG 59.253 50.000 0.00 0.00 36.75 3.33
202 203 3.408634 CCGAACCAGGATAAACTGTTGT 58.591 45.455 0.00 0.00 36.75 3.32
203 204 3.188460 CCGAACCAGGATAAACTGTTGTG 59.812 47.826 0.00 0.00 36.75 3.33
204 205 3.813166 CGAACCAGGATAAACTGTTGTGT 59.187 43.478 0.00 0.00 36.75 3.72
205 206 4.084013 CGAACCAGGATAAACTGTTGTGTC 60.084 45.833 0.00 0.00 36.75 3.67
206 207 4.706842 ACCAGGATAAACTGTTGTGTCT 57.293 40.909 0.00 0.00 36.75 3.41
207 208 4.642429 ACCAGGATAAACTGTTGTGTCTC 58.358 43.478 0.00 0.00 36.75 3.36
208 209 4.348168 ACCAGGATAAACTGTTGTGTCTCT 59.652 41.667 0.00 0.00 36.75 3.10
209 210 4.932200 CCAGGATAAACTGTTGTGTCTCTC 59.068 45.833 0.00 0.00 36.75 3.20
210 211 5.279708 CCAGGATAAACTGTTGTGTCTCTCT 60.280 44.000 0.00 0.00 36.75 3.10
211 212 5.636965 CAGGATAAACTGTTGTGTCTCTCTG 59.363 44.000 0.00 0.00 33.81 3.35
212 213 5.305644 AGGATAAACTGTTGTGTCTCTCTGT 59.694 40.000 0.00 0.00 0.00 3.41
213 214 5.635700 GGATAAACTGTTGTGTCTCTCTGTC 59.364 44.000 0.00 0.00 0.00 3.51
214 215 4.744795 AAACTGTTGTGTCTCTCTGTCT 57.255 40.909 0.00 0.00 0.00 3.41
215 216 4.314740 AACTGTTGTGTCTCTCTGTCTC 57.685 45.455 0.00 0.00 0.00 3.36
216 217 3.561143 ACTGTTGTGTCTCTCTGTCTCT 58.439 45.455 0.00 0.00 0.00 3.10
217 218 3.957497 ACTGTTGTGTCTCTCTGTCTCTT 59.043 43.478 0.00 0.00 0.00 2.85
218 219 4.404073 ACTGTTGTGTCTCTCTGTCTCTTT 59.596 41.667 0.00 0.00 0.00 2.52
219 220 4.686972 TGTTGTGTCTCTCTGTCTCTTTG 58.313 43.478 0.00 0.00 0.00 2.77
220 221 4.402474 TGTTGTGTCTCTCTGTCTCTTTGA 59.598 41.667 0.00 0.00 0.00 2.69
221 222 4.844998 TGTGTCTCTCTGTCTCTTTGAG 57.155 45.455 0.00 0.00 0.00 3.02
222 223 3.005261 TGTGTCTCTCTGTCTCTTTGAGC 59.995 47.826 0.00 0.00 0.00 4.26
223 224 3.255642 GTGTCTCTCTGTCTCTTTGAGCT 59.744 47.826 0.00 0.00 0.00 4.09
224 225 3.505680 TGTCTCTCTGTCTCTTTGAGCTC 59.494 47.826 6.82 6.82 0.00 4.09
225 226 3.505680 GTCTCTCTGTCTCTTTGAGCTCA 59.494 47.826 13.74 13.74 0.00 4.26
226 227 3.505680 TCTCTCTGTCTCTTTGAGCTCAC 59.494 47.826 18.03 4.16 0.00 3.51
227 228 2.227626 TCTCTGTCTCTTTGAGCTCACG 59.772 50.000 18.03 10.95 0.00 4.35
228 229 1.066914 CTGTCTCTTTGAGCTCACGC 58.933 55.000 18.03 3.82 0.00 5.34
229 230 0.664466 TGTCTCTTTGAGCTCACGCG 60.664 55.000 18.03 3.53 42.32 6.01
230 231 1.734477 TCTCTTTGAGCTCACGCGC 60.734 57.895 18.03 0.00 42.32 6.86
231 232 1.735920 CTCTTTGAGCTCACGCGCT 60.736 57.895 18.03 0.00 44.33 5.92
232 233 0.456824 CTCTTTGAGCTCACGCGCTA 60.457 55.000 18.03 0.00 41.08 4.26
233 234 0.456824 TCTTTGAGCTCACGCGCTAG 60.457 55.000 18.03 4.70 41.08 3.42
234 235 1.416813 CTTTGAGCTCACGCGCTAGG 61.417 60.000 18.03 0.00 41.08 3.02
235 236 3.989698 TTGAGCTCACGCGCTAGGC 62.990 63.158 18.03 5.87 41.08 3.93
236 237 4.200283 GAGCTCACGCGCTAGGCT 62.200 66.667 9.40 11.35 41.08 4.58
237 238 4.504916 AGCTCACGCGCTAGGCTG 62.505 66.667 5.73 0.00 42.32 4.85
238 239 4.803426 GCTCACGCGCTAGGCTGT 62.803 66.667 5.73 0.00 40.44 4.40
239 240 2.882777 CTCACGCGCTAGGCTGTG 60.883 66.667 5.73 5.04 43.06 3.66
240 241 3.342370 CTCACGCGCTAGGCTGTGA 62.342 63.158 5.73 9.63 45.76 3.58
241 242 2.882777 CACGCGCTAGGCTGTGAG 60.883 66.667 5.73 0.00 43.82 3.51
242 243 4.135153 ACGCGCTAGGCTGTGAGG 62.135 66.667 5.73 0.00 40.44 3.86
243 244 3.826754 CGCGCTAGGCTGTGAGGA 61.827 66.667 5.56 0.00 40.44 3.71
244 245 2.818132 GCGCTAGGCTGTGAGGAT 59.182 61.111 0.00 0.00 39.11 3.24
245 246 1.300542 GCGCTAGGCTGTGAGGATC 60.301 63.158 0.00 0.00 39.11 3.36
246 247 1.007964 CGCTAGGCTGTGAGGATCG 60.008 63.158 0.00 0.00 38.61 3.69
255 256 1.008309 GTGAGGATCGCGAGTAGGC 60.008 63.158 16.66 3.31 38.61 3.93
256 257 1.453197 TGAGGATCGCGAGTAGGCA 60.453 57.895 16.66 6.15 38.61 4.75
257 258 1.284408 GAGGATCGCGAGTAGGCAG 59.716 63.158 16.66 0.00 0.00 4.85
258 259 2.136196 GAGGATCGCGAGTAGGCAGG 62.136 65.000 16.66 0.00 0.00 4.85
259 260 2.355244 GATCGCGAGTAGGCAGGC 60.355 66.667 16.66 0.00 0.00 4.85
260 261 2.835431 ATCGCGAGTAGGCAGGCT 60.835 61.111 16.66 0.38 0.00 4.58
261 262 3.144120 ATCGCGAGTAGGCAGGCTG 62.144 63.158 16.66 10.94 0.00 4.85
262 263 4.880537 CGCGAGTAGGCAGGCTGG 62.881 72.222 17.64 0.00 0.00 4.85
263 264 4.537433 GCGAGTAGGCAGGCTGGG 62.537 72.222 17.64 0.00 0.00 4.45
264 265 3.077556 CGAGTAGGCAGGCTGGGT 61.078 66.667 17.64 0.00 0.00 4.51
265 266 1.756950 CGAGTAGGCAGGCTGGGTA 60.757 63.158 17.64 0.00 0.00 3.69
266 267 1.739338 CGAGTAGGCAGGCTGGGTAG 61.739 65.000 17.64 0.00 0.00 3.18
267 268 1.383248 AGTAGGCAGGCTGGGTAGG 60.383 63.158 17.64 0.00 0.00 3.18
268 269 1.689582 GTAGGCAGGCTGGGTAGGT 60.690 63.158 17.64 0.00 0.00 3.08
269 270 1.082206 TAGGCAGGCTGGGTAGGTT 59.918 57.895 17.64 0.00 0.00 3.50
270 271 1.271840 TAGGCAGGCTGGGTAGGTTG 61.272 60.000 17.64 0.00 0.00 3.77
271 272 2.602676 GGCAGGCTGGGTAGGTTGA 61.603 63.158 17.64 0.00 0.00 3.18
272 273 1.078143 GCAGGCTGGGTAGGTTGAG 60.078 63.158 17.64 0.00 0.00 3.02
273 274 1.553690 GCAGGCTGGGTAGGTTGAGA 61.554 60.000 17.64 0.00 0.00 3.27
274 275 1.207791 CAGGCTGGGTAGGTTGAGAT 58.792 55.000 6.61 0.00 0.00 2.75
275 276 1.139853 CAGGCTGGGTAGGTTGAGATC 59.860 57.143 6.61 0.00 0.00 2.75
276 277 1.008938 AGGCTGGGTAGGTTGAGATCT 59.991 52.381 0.00 0.00 0.00 2.75
277 278 1.414550 GGCTGGGTAGGTTGAGATCTC 59.585 57.143 16.21 16.21 0.00 2.75
278 279 1.414550 GCTGGGTAGGTTGAGATCTCC 59.585 57.143 20.03 5.52 0.00 3.71
279 280 2.752030 CTGGGTAGGTTGAGATCTCCA 58.248 52.381 20.03 6.31 0.00 3.86
280 281 2.432510 CTGGGTAGGTTGAGATCTCCAC 59.567 54.545 20.03 18.28 0.00 4.02
281 282 2.225522 TGGGTAGGTTGAGATCTCCACA 60.226 50.000 24.00 11.36 0.00 4.17
282 283 2.168728 GGGTAGGTTGAGATCTCCACAC 59.831 54.545 24.00 15.88 0.00 3.82
283 284 2.159226 GGTAGGTTGAGATCTCCACACG 60.159 54.545 24.00 0.00 0.00 4.49
284 285 0.247736 AGGTTGAGATCTCCACACGC 59.752 55.000 24.00 10.39 0.00 5.34
285 286 0.037326 GGTTGAGATCTCCACACGCA 60.037 55.000 24.00 1.92 0.00 5.24
286 287 1.071605 GTTGAGATCTCCACACGCAC 58.928 55.000 20.03 2.18 0.00 5.34
287 288 0.037326 TTGAGATCTCCACACGCACC 60.037 55.000 20.03 0.00 0.00 5.01
288 289 1.153549 GAGATCTCCACACGCACCC 60.154 63.158 12.00 0.00 0.00 4.61
289 290 2.509336 GATCTCCACACGCACCCG 60.509 66.667 0.00 0.00 41.14 5.28
290 291 2.994995 ATCTCCACACGCACCCGA 60.995 61.111 0.00 0.00 38.29 5.14
291 292 2.890847 GATCTCCACACGCACCCGAG 62.891 65.000 0.00 0.00 38.29 4.63
292 293 3.991051 CTCCACACGCACCCGAGT 61.991 66.667 0.00 0.00 38.81 4.18
297 298 3.403057 CACGCACCCGAGTGTTCG 61.403 66.667 0.00 0.00 46.35 3.95
312 313 1.766496 TGTTCGAACCTCTGAAGGGTT 59.234 47.619 24.78 1.31 45.17 4.11
313 314 2.171870 TGTTCGAACCTCTGAAGGGTTT 59.828 45.455 24.78 0.00 45.17 3.27
314 315 2.543777 TCGAACCTCTGAAGGGTTTG 57.456 50.000 8.94 8.94 45.17 2.93
315 316 0.875059 CGAACCTCTGAAGGGTTTGC 59.125 55.000 3.20 0.00 45.17 3.68
316 317 0.875059 GAACCTCTGAAGGGTTTGCG 59.125 55.000 3.20 0.00 45.17 4.85
317 318 0.537371 AACCTCTGAAGGGTTTGCGG 60.537 55.000 0.00 0.00 40.97 5.69
318 319 1.374947 CCTCTGAAGGGTTTGCGGA 59.625 57.895 0.00 0.00 39.21 5.54
319 320 0.250727 CCTCTGAAGGGTTTGCGGAA 60.251 55.000 0.00 0.00 39.21 4.30
320 321 0.875059 CTCTGAAGGGTTTGCGGAAC 59.125 55.000 0.00 0.00 37.53 3.62
321 322 0.181587 TCTGAAGGGTTTGCGGAACA 59.818 50.000 0.00 0.00 40.13 3.18
322 323 0.310854 CTGAAGGGTTTGCGGAACAC 59.689 55.000 0.00 1.48 42.20 3.32
323 324 1.281656 GAAGGGTTTGCGGAACACG 59.718 57.895 0.00 0.00 46.56 4.49
324 325 1.153127 AAGGGTTTGCGGAACACGA 60.153 52.632 0.00 0.00 46.56 4.35
325 326 0.748729 AAGGGTTTGCGGAACACGAA 60.749 50.000 0.00 0.00 46.56 3.85
326 327 0.748729 AGGGTTTGCGGAACACGAAA 60.749 50.000 0.00 0.00 46.56 3.46
327 328 2.088494 AGGGTTTGCGGAACACGAAAT 61.088 47.619 0.00 0.00 46.56 2.17
328 329 3.957908 AGGGTTTGCGGAACACGAAATC 61.958 50.000 0.00 0.00 46.56 2.17
329 330 4.827627 GGGTTTGCGGAACACGAAATCC 62.828 54.545 0.00 0.00 45.45 3.01
335 336 1.792006 GGAACACGAAATCCGACAGT 58.208 50.000 0.00 0.00 41.76 3.55
336 337 2.950433 GGAACACGAAATCCGACAGTA 58.050 47.619 0.00 0.00 41.76 2.74
337 338 2.665052 GGAACACGAAATCCGACAGTAC 59.335 50.000 0.00 0.00 41.76 2.73
338 339 1.973138 ACACGAAATCCGACAGTACG 58.027 50.000 0.00 0.00 41.76 3.67
339 340 1.267806 ACACGAAATCCGACAGTACGT 59.732 47.619 0.00 0.00 41.76 3.57
340 341 1.647213 CACGAAATCCGACAGTACGTG 59.353 52.381 0.00 0.00 42.04 4.49
341 342 1.267806 ACGAAATCCGACAGTACGTGT 59.732 47.619 0.00 0.00 44.49 4.49
342 343 2.287788 ACGAAATCCGACAGTACGTGTT 60.288 45.455 0.00 0.00 40.56 3.32
343 344 2.090041 CGAAATCCGACAGTACGTGTTG 59.910 50.000 0.00 0.00 40.56 3.33
344 345 3.311106 GAAATCCGACAGTACGTGTTGA 58.689 45.455 0.00 7.31 42.69 3.18
345 346 2.631418 ATCCGACAGTACGTGTTGAG 57.369 50.000 0.00 0.00 42.69 3.02
346 347 1.311859 TCCGACAGTACGTGTTGAGT 58.688 50.000 0.00 0.00 42.69 3.41
347 348 1.677576 TCCGACAGTACGTGTTGAGTT 59.322 47.619 0.00 0.00 42.69 3.01
348 349 2.049228 CCGACAGTACGTGTTGAGTTC 58.951 52.381 0.00 0.00 42.69 3.01
349 350 2.542205 CCGACAGTACGTGTTGAGTTCA 60.542 50.000 0.00 0.00 42.69 3.18
350 351 3.305964 CGACAGTACGTGTTGAGTTCAT 58.694 45.455 0.00 0.00 42.69 2.57
351 352 4.469552 CGACAGTACGTGTTGAGTTCATA 58.530 43.478 0.00 0.00 42.69 2.15
352 353 4.553815 CGACAGTACGTGTTGAGTTCATAG 59.446 45.833 0.00 0.00 42.69 2.23
353 354 4.806330 ACAGTACGTGTTGAGTTCATAGG 58.194 43.478 0.00 0.00 34.94 2.57
354 355 4.174009 CAGTACGTGTTGAGTTCATAGGG 58.826 47.826 0.00 0.00 0.00 3.53
355 356 4.082408 CAGTACGTGTTGAGTTCATAGGGA 60.082 45.833 0.00 0.00 0.00 4.20
356 357 4.710375 AGTACGTGTTGAGTTCATAGGGAT 59.290 41.667 0.00 0.00 0.00 3.85
357 358 3.861840 ACGTGTTGAGTTCATAGGGATG 58.138 45.455 0.00 0.00 0.00 3.51
358 359 3.513912 ACGTGTTGAGTTCATAGGGATGA 59.486 43.478 0.00 0.00 40.45 2.92
359 360 4.115516 CGTGTTGAGTTCATAGGGATGAG 58.884 47.826 0.00 0.00 43.03 2.90
360 361 3.873952 GTGTTGAGTTCATAGGGATGAGC 59.126 47.826 0.00 0.00 43.03 4.26
361 362 3.126831 GTTGAGTTCATAGGGATGAGCG 58.873 50.000 0.00 0.00 45.32 5.03
362 363 2.388735 TGAGTTCATAGGGATGAGCGT 58.611 47.619 0.00 0.00 45.32 5.07
363 364 3.562182 TGAGTTCATAGGGATGAGCGTA 58.438 45.455 0.00 0.00 45.32 4.42
364 365 4.152647 TGAGTTCATAGGGATGAGCGTAT 58.847 43.478 0.00 0.00 45.32 3.06
365 366 4.021981 TGAGTTCATAGGGATGAGCGTATG 60.022 45.833 0.00 0.00 45.32 2.39
366 367 3.898123 AGTTCATAGGGATGAGCGTATGT 59.102 43.478 0.00 0.00 45.32 2.29
367 368 3.942130 TCATAGGGATGAGCGTATGTG 57.058 47.619 0.00 0.00 37.15 3.21
368 369 3.496331 TCATAGGGATGAGCGTATGTGA 58.504 45.455 0.00 0.00 37.15 3.58
369 370 3.507622 TCATAGGGATGAGCGTATGTGAG 59.492 47.826 0.00 0.00 37.15 3.51
370 371 0.390860 AGGGATGAGCGTATGTGAGC 59.609 55.000 0.00 0.00 0.00 4.26
371 372 0.104855 GGGATGAGCGTATGTGAGCA 59.895 55.000 0.00 0.00 35.48 4.26
372 373 1.270518 GGGATGAGCGTATGTGAGCAT 60.271 52.381 0.00 0.00 39.03 3.79
373 374 2.064762 GGATGAGCGTATGTGAGCATC 58.935 52.381 0.00 0.00 36.58 3.91
374 375 2.288702 GGATGAGCGTATGTGAGCATCT 60.289 50.000 0.00 0.00 36.58 2.90
375 376 3.057245 GGATGAGCGTATGTGAGCATCTA 60.057 47.826 0.00 0.00 36.58 1.98
376 377 3.355626 TGAGCGTATGTGAGCATCTAC 57.644 47.619 0.00 0.00 36.58 2.59
377 378 2.687935 TGAGCGTATGTGAGCATCTACA 59.312 45.455 0.00 0.00 36.58 2.74
378 379 3.319122 TGAGCGTATGTGAGCATCTACAT 59.681 43.478 0.00 0.00 39.19 2.29
379 380 4.202151 TGAGCGTATGTGAGCATCTACATT 60.202 41.667 0.00 0.00 37.75 2.71
380 381 4.697514 AGCGTATGTGAGCATCTACATTT 58.302 39.130 0.00 0.00 37.75 2.32
381 382 4.509230 AGCGTATGTGAGCATCTACATTTG 59.491 41.667 0.00 0.00 37.75 2.32
382 383 4.766007 CGTATGTGAGCATCTACATTTGC 58.234 43.478 0.00 0.00 37.75 3.68
383 384 4.270808 CGTATGTGAGCATCTACATTTGCA 59.729 41.667 0.00 0.00 41.35 4.08
384 385 4.627611 ATGTGAGCATCTACATTTGCAC 57.372 40.909 0.00 0.00 41.35 4.57
385 386 3.678289 TGTGAGCATCTACATTTGCACT 58.322 40.909 0.00 0.00 41.35 4.40
386 387 4.831107 TGTGAGCATCTACATTTGCACTA 58.169 39.130 0.00 0.00 41.35 2.74
387 388 5.244755 TGTGAGCATCTACATTTGCACTAA 58.755 37.500 0.00 0.00 41.35 2.24
388 389 5.882000 TGTGAGCATCTACATTTGCACTAAT 59.118 36.000 0.00 0.00 41.35 1.73
389 390 7.047271 TGTGAGCATCTACATTTGCACTAATA 58.953 34.615 0.00 0.00 41.35 0.98
390 391 7.011389 TGTGAGCATCTACATTTGCACTAATAC 59.989 37.037 0.00 0.00 41.35 1.89
419 420 8.468720 AAAAATACACAAGTTAGTTTTTGCGT 57.531 26.923 0.00 0.00 31.00 5.24
436 438 2.885266 TGCGTATGCCCTAACAAAACAA 59.115 40.909 4.05 0.00 41.78 2.83
441 443 6.403855 GCGTATGCCCTAACAAAACAATTAGA 60.404 38.462 0.00 0.00 30.81 2.10
591 597 9.682465 ACCTTTATATCCCTTCTTTTTACTGTC 57.318 33.333 0.00 0.00 0.00 3.51
607 613 1.871039 CTGTCACCCGTGTCGAAATTT 59.129 47.619 0.00 0.00 0.00 1.82
612 618 1.231221 CCCGTGTCGAAATTTCACCA 58.769 50.000 17.99 10.29 0.00 4.17
682 689 4.299155 CCTAAACTGCGTGTCGATGATAT 58.701 43.478 0.00 0.00 0.00 1.63
737 745 2.727798 GCGTACACGTACACTTCACAAT 59.272 45.455 8.02 0.00 42.22 2.71
761 769 1.029681 GTGCCAAAAAGACTCCCGTT 58.970 50.000 0.00 0.00 0.00 4.44
770 778 0.765510 AGACTCCCGTTGCCTCTTTT 59.234 50.000 0.00 0.00 0.00 2.27
824 836 1.673920 GTGAGGAAAGCACGAAAACCA 59.326 47.619 0.00 0.00 0.00 3.67
827 839 0.741915 GGAAAGCACGAAAACCACCA 59.258 50.000 0.00 0.00 0.00 4.17
833 845 0.596082 CACGAAAACCACCATGGACC 59.404 55.000 21.47 0.00 40.96 4.46
852 864 3.723348 GGCGCACACGGACCTTTC 61.723 66.667 10.83 0.00 40.57 2.62
853 865 3.723348 GCGCACACGGACCTTTCC 61.723 66.667 0.30 0.00 40.57 3.13
854 866 2.280524 CGCACACGGACCTTTCCA 60.281 61.111 0.00 0.00 43.00 3.53
855 867 2.604174 CGCACACGGACCTTTCCAC 61.604 63.158 0.00 0.00 43.00 4.02
856 868 2.604174 GCACACGGACCTTTCCACG 61.604 63.158 0.00 0.00 43.00 4.94
857 869 1.959226 CACACGGACCTTTCCACGG 60.959 63.158 0.00 0.00 43.00 4.94
858 870 3.047877 CACGGACCTTTCCACGGC 61.048 66.667 0.00 0.00 43.00 5.68
859 871 3.552384 ACGGACCTTTCCACGGCA 61.552 61.111 0.00 0.00 43.00 5.69
860 872 2.046314 CGGACCTTTCCACGGCAT 60.046 61.111 0.00 0.00 43.00 4.40
861 873 2.398554 CGGACCTTTCCACGGCATG 61.399 63.158 0.00 0.00 43.00 4.06
879 891 2.488355 GAGAACGATCGTCGGGCA 59.512 61.111 22.98 0.00 45.59 5.36
1027 1039 1.484653 AGAAGCTACCACACACACACA 59.515 47.619 0.00 0.00 0.00 3.72
1029 1041 0.539518 AGCTACCACACACACACACA 59.460 50.000 0.00 0.00 0.00 3.72
1031 1043 0.927537 CTACCACACACACACACACG 59.072 55.000 0.00 0.00 0.00 4.49
1149 1171 2.202466 CGGGCTTCGCGTACGTTA 60.202 61.111 17.90 2.06 41.18 3.18
1201 1224 4.263209 CTTGTTTGGCCGTGCGCA 62.263 61.111 5.66 5.66 40.31 6.09
1491 1514 1.997874 GGCCTGGATGGTCAGTCCT 60.998 63.158 0.00 0.00 40.97 3.85
1759 1783 2.183555 CGGTAAGTCACTCCCCGC 59.816 66.667 2.43 0.00 0.00 6.13
1771 1795 4.122149 CCCCGCCCCTGCAACATA 62.122 66.667 0.00 0.00 37.32 2.29
1826 1850 9.487790 TGAAAGAAAAATAAAACCAAGGCTATG 57.512 29.630 0.00 0.00 0.00 2.23
1961 1989 0.461339 CGACAAGGTACATTCCCCGG 60.461 60.000 0.00 0.00 0.00 5.73
1988 2016 3.912496 TCACCTCTCTCTCTCTCTCTG 57.088 52.381 0.00 0.00 0.00 3.35
2304 2332 3.748863 TCTCTCTGCCGAATCAAGC 57.251 52.632 0.00 0.00 0.00 4.01
2333 2361 0.247419 GTGAGTGCGCGTGATGATTG 60.247 55.000 8.43 0.00 0.00 2.67
2347 2375 4.217118 GTGATGATTGAACTCTGGCTTTGT 59.783 41.667 0.00 0.00 0.00 2.83
2429 2457 1.825191 CGGCATGGACATCAAGGGG 60.825 63.158 0.00 0.00 0.00 4.79
2457 2485 1.341080 CAATGTATGCCCATTCCCCC 58.659 55.000 0.00 0.00 32.81 5.40
2458 2486 1.133072 CAATGTATGCCCATTCCCCCT 60.133 52.381 0.00 0.00 32.81 4.79
2461 2489 0.555769 GTATGCCCATTCCCCCTTCA 59.444 55.000 0.00 0.00 0.00 3.02
2462 2490 1.147817 GTATGCCCATTCCCCCTTCAT 59.852 52.381 0.00 0.00 0.00 2.57
2463 2491 0.189327 ATGCCCATTCCCCCTTCATC 59.811 55.000 0.00 0.00 0.00 2.92
2464 2492 1.529244 GCCCATTCCCCCTTCATCG 60.529 63.158 0.00 0.00 0.00 3.84
2465 2493 1.529244 CCCATTCCCCCTTCATCGC 60.529 63.158 0.00 0.00 0.00 4.58
2467 2495 1.893808 CATTCCCCCTTCATCGCCG 60.894 63.158 0.00 0.00 0.00 6.46
2468 2496 2.375345 ATTCCCCCTTCATCGCCGT 61.375 57.895 0.00 0.00 0.00 5.68
2469 2497 1.052124 ATTCCCCCTTCATCGCCGTA 61.052 55.000 0.00 0.00 0.00 4.02
2470 2498 1.052124 TTCCCCCTTCATCGCCGTAT 61.052 55.000 0.00 0.00 0.00 3.06
2471 2499 0.178955 TCCCCCTTCATCGCCGTATA 60.179 55.000 0.00 0.00 0.00 1.47
2472 2500 0.902531 CCCCCTTCATCGCCGTATAT 59.097 55.000 0.00 0.00 0.00 0.86
2543 2616 2.060004 CTCATGCCAATCTGCAGCCG 62.060 60.000 9.47 0.00 45.93 5.52
2561 2634 1.227943 GGAGTCTGTGCTGTGCCAA 60.228 57.895 0.00 0.00 0.00 4.52
2564 2637 1.526917 GTCTGTGCTGTGCCAACCT 60.527 57.895 0.00 0.00 0.00 3.50
2591 2664 1.974236 GAGTTCCTCCCCATGATCGAT 59.026 52.381 0.00 0.00 0.00 3.59
2614 2687 7.591795 CGATGAGGTACTTAATTACACTAGCAG 59.408 40.741 5.46 0.00 41.55 4.24
2656 2729 5.997746 CCTTACAAATGAGGAGAAGAACACA 59.002 40.000 0.00 0.00 33.19 3.72
2669 2742 3.126001 AGAACACATGTCCATTCGTGT 57.874 42.857 0.00 0.00 44.17 4.49
2677 2750 6.535150 ACACATGTCCATTCGTGTTTATCTAG 59.465 38.462 0.00 0.00 39.49 2.43
2679 2752 4.439057 TGTCCATTCGTGTTTATCTAGCC 58.561 43.478 0.00 0.00 0.00 3.93
2680 2753 3.489785 GTCCATTCGTGTTTATCTAGCCG 59.510 47.826 0.00 0.00 0.00 5.52
2849 2941 0.259356 AGGTAGGCGAGCCTTACTCT 59.741 55.000 22.69 11.32 45.70 3.24
2921 3014 6.475207 CATCATGTGCGGTTAGTTTAGTTAC 58.525 40.000 0.00 0.00 0.00 2.50
2922 3015 4.931002 TCATGTGCGGTTAGTTTAGTTACC 59.069 41.667 0.00 0.00 0.00 2.85
2923 3016 4.333913 TGTGCGGTTAGTTTAGTTACCA 57.666 40.909 0.00 0.00 0.00 3.25
2924 3017 4.897140 TGTGCGGTTAGTTTAGTTACCAT 58.103 39.130 0.00 0.00 0.00 3.55
2925 3018 4.931002 TGTGCGGTTAGTTTAGTTACCATC 59.069 41.667 0.00 0.00 0.00 3.51
2926 3019 4.330894 GTGCGGTTAGTTTAGTTACCATCC 59.669 45.833 0.00 0.00 0.00 3.51
2927 3020 3.553105 GCGGTTAGTTTAGTTACCATCCG 59.447 47.826 0.00 0.00 37.71 4.18
2930 3023 5.111989 GGTTAGTTTAGTTACCATCCGTCC 58.888 45.833 0.00 0.00 0.00 4.79
2931 3024 5.105187 GGTTAGTTTAGTTACCATCCGTCCT 60.105 44.000 0.00 0.00 0.00 3.85
2932 3025 4.732672 AGTTTAGTTACCATCCGTCCTC 57.267 45.455 0.00 0.00 0.00 3.71
2933 3026 3.129988 AGTTTAGTTACCATCCGTCCTCG 59.870 47.826 0.00 0.00 0.00 4.63
2934 3027 2.715749 TAGTTACCATCCGTCCTCGA 57.284 50.000 0.00 0.00 39.71 4.04
2935 3028 2.068834 AGTTACCATCCGTCCTCGAT 57.931 50.000 0.00 0.00 39.71 3.59
2936 3029 1.955080 AGTTACCATCCGTCCTCGATC 59.045 52.381 0.00 0.00 39.71 3.69
2937 3030 0.949397 TTACCATCCGTCCTCGATCG 59.051 55.000 9.36 9.36 39.71 3.69
2938 3031 0.179037 TACCATCCGTCCTCGATCGT 60.179 55.000 15.94 0.00 39.71 3.73
2939 3032 1.283181 CCATCCGTCCTCGATCGTC 59.717 63.158 15.94 3.91 39.71 4.20
2940 3033 1.082692 CATCCGTCCTCGATCGTCG 60.083 63.158 15.94 14.64 42.10 5.12
2941 3034 1.523258 ATCCGTCCTCGATCGTCGT 60.523 57.895 15.94 0.00 41.35 4.34
2942 3035 1.497223 ATCCGTCCTCGATCGTCGTC 61.497 60.000 15.94 3.46 41.35 4.20
2943 3036 2.172372 CCGTCCTCGATCGTCGTCT 61.172 63.158 15.94 0.00 41.35 4.18
2944 3037 1.273300 CGTCCTCGATCGTCGTCTC 59.727 63.158 15.94 1.86 41.35 3.36
2945 3038 1.273300 GTCCTCGATCGTCGTCTCG 59.727 63.158 15.94 11.84 41.35 4.04
2946 3039 1.153686 TCCTCGATCGTCGTCTCGT 60.154 57.895 15.94 0.00 41.35 4.18
2947 3040 1.144565 TCCTCGATCGTCGTCTCGTC 61.145 60.000 15.94 0.00 41.35 4.20
2948 3041 1.146957 CCTCGATCGTCGTCTCGTCT 61.147 60.000 15.94 0.00 41.35 4.18
2949 3042 0.043737 CTCGATCGTCGTCTCGTCTG 60.044 60.000 15.94 7.45 41.35 3.51
2950 3043 0.457337 TCGATCGTCGTCTCGTCTGA 60.457 55.000 15.94 0.00 41.35 3.27
2951 3044 0.369248 CGATCGTCGTCTCGTCTGAA 59.631 55.000 7.03 0.00 34.72 3.02
2958 3051 2.223611 GTCGTCTCGTCTGAAGTCTGAA 59.776 50.000 0.00 0.00 0.00 3.02
2975 3068 2.498078 CTGAACTAACCACTCTCCTCCC 59.502 54.545 0.00 0.00 0.00 4.30
2976 3069 1.832366 GAACTAACCACTCTCCTCCCC 59.168 57.143 0.00 0.00 0.00 4.81
3174 3268 4.941873 AGATCGGAACCTCCATTTGTTTAC 59.058 41.667 0.00 0.00 35.91 2.01
3269 3368 2.354188 CACGCAACGACGACTCCA 60.354 61.111 0.00 0.00 36.70 3.86
3271 3370 2.354188 CGCAACGACGACTCCACA 60.354 61.111 0.00 0.00 34.06 4.17
3329 3434 0.879839 TCGTTTTCGGTCCCGGTTTC 60.880 55.000 5.80 0.00 44.25 2.78
3335 3440 0.034337 TCGGTCCCGGTTTCTTTCTG 59.966 55.000 5.80 0.00 40.25 3.02
3341 3446 2.171870 TCCCGGTTTCTTTCTGTTCACT 59.828 45.455 0.00 0.00 0.00 3.41
3364 3469 1.395608 CGTTTCACACCACTGTCGTTT 59.604 47.619 0.00 0.00 0.00 3.60
3365 3470 2.536130 CGTTTCACACCACTGTCGTTTC 60.536 50.000 0.00 0.00 0.00 2.78
3367 3472 0.173935 TCACACCACTGTCGTTTCGT 59.826 50.000 0.00 0.00 0.00 3.85
3372 3477 3.872771 ACACCACTGTCGTTTCGTAAATT 59.127 39.130 0.00 0.00 0.00 1.82
3373 3478 4.333372 ACACCACTGTCGTTTCGTAAATTT 59.667 37.500 0.00 0.00 0.00 1.82
3374 3479 5.163733 ACACCACTGTCGTTTCGTAAATTTT 60.164 36.000 0.00 0.00 0.00 1.82
3375 3480 5.740099 CACCACTGTCGTTTCGTAAATTTTT 59.260 36.000 0.00 0.00 0.00 1.94
3397 3502 1.092921 AAAGAAACCGTGCGCTGACA 61.093 50.000 9.73 0.00 0.00 3.58
3411 3516 3.249189 GACAGACACCCTGCCCCA 61.249 66.667 0.00 0.00 46.81 4.96
3614 3719 4.767255 CTGCTCCGGCTGGTGGAC 62.767 72.222 12.43 0.08 39.59 4.02
3685 3796 3.556306 GCCGGCCCACCAGCTATA 61.556 66.667 18.11 0.00 36.34 1.31
3686 3797 2.743718 CCGGCCCACCAGCTATAG 59.256 66.667 0.00 0.00 34.57 1.31
3687 3798 2.031163 CGGCCCACCAGCTATAGC 59.969 66.667 17.33 17.33 42.49 2.97
3689 3800 2.150051 GGCCCACCAGCTATAGCCT 61.150 63.158 21.17 6.01 43.38 4.58
3690 3801 0.836400 GGCCCACCAGCTATAGCCTA 60.836 60.000 21.17 0.00 43.38 3.93
3820 3935 4.457257 CCCAAGTTTTCTCTGATGGTTCTC 59.543 45.833 0.00 0.00 0.00 2.87
3932 4047 2.048222 CTCGCTTGCTCCCGAACA 60.048 61.111 0.00 0.00 32.56 3.18
3969 4085 3.108343 CTGCAGCAGCTACCATGC 58.892 61.111 10.14 0.00 44.18 4.06
3970 4086 1.747745 CTGCAGCAGCTACCATGCA 60.748 57.895 10.14 12.11 46.31 3.96
3971 4087 1.077285 TGCAGCAGCTACCATGCAT 60.077 52.632 1.76 0.00 46.31 3.96
3972 4088 0.180878 TGCAGCAGCTACCATGCATA 59.819 50.000 0.00 0.00 46.31 3.14
3973 4089 1.202842 TGCAGCAGCTACCATGCATAT 60.203 47.619 0.00 0.00 46.31 1.78
3974 4090 2.038820 TGCAGCAGCTACCATGCATATA 59.961 45.455 0.00 0.00 46.31 0.86
3975 4091 3.076621 GCAGCAGCTACCATGCATATAA 58.923 45.455 0.00 0.00 46.31 0.98
3986 4102 3.248363 CCATGCATATAACACAGTGACCG 59.752 47.826 7.81 0.00 0.00 4.79
3994 4110 3.667282 ACAGTGACCGACCGACCG 61.667 66.667 0.00 0.00 0.00 4.79
3995 4111 3.667282 CAGTGACCGACCGACCGT 61.667 66.667 0.00 0.00 0.00 4.83
3996 4112 3.667282 AGTGACCGACCGACCGTG 61.667 66.667 0.00 0.00 0.00 4.94
3997 4113 3.969802 GTGACCGACCGACCGTGT 61.970 66.667 0.00 0.00 0.00 4.49
3998 4114 3.663176 TGACCGACCGACCGTGTC 61.663 66.667 0.00 0.00 33.49 3.67
3999 4115 3.360340 GACCGACCGACCGTGTCT 61.360 66.667 8.54 0.00 31.67 3.41
4000 4116 2.032528 ACCGACCGACCGTGTCTA 59.967 61.111 8.54 0.00 0.00 2.59
4001 4117 2.245714 GACCGACCGACCGTGTCTAC 62.246 65.000 8.54 0.00 31.67 2.59
4002 4118 2.482374 CGACCGACCGTGTCTACC 59.518 66.667 8.54 0.00 0.00 3.18
4003 4119 2.037136 CGACCGACCGTGTCTACCT 61.037 63.158 8.54 0.00 0.00 3.08
4004 4120 0.740868 CGACCGACCGTGTCTACCTA 60.741 60.000 8.54 0.00 0.00 3.08
4005 4121 1.012841 GACCGACCGTGTCTACCTAG 58.987 60.000 3.15 0.00 0.00 3.02
4006 4122 1.028868 ACCGACCGTGTCTACCTAGC 61.029 60.000 3.15 0.00 0.00 3.42
4011 4135 1.283029 ACCGTGTCTACCTAGCCACTA 59.717 52.381 0.00 0.00 30.54 2.74
4036 4160 5.672503 TGCTGGTCTACTAGTACTCTACTG 58.327 45.833 0.00 0.00 39.81 2.74
4068 4198 4.167597 TTTTTGTCCCACGGGCTC 57.832 55.556 0.00 0.00 34.68 4.70
4096 4226 1.002134 ATGCAAAGCTACCTGCCGT 60.002 52.632 11.59 0.40 44.23 5.68
4135 4269 3.991121 CCTTGACGAGAAAGAAGGTTCTC 59.009 47.826 5.10 5.10 46.75 2.87
4181 4332 2.107953 GATCGCCCTCTGTCCAGC 59.892 66.667 0.00 0.00 0.00 4.85
4193 4344 0.865111 TGTCCAGCGTTCAATTGTCG 59.135 50.000 16.67 16.67 0.00 4.35
4194 4345 0.865769 GTCCAGCGTTCAATTGTCGT 59.134 50.000 19.89 9.59 0.00 4.34
4195 4346 1.136336 GTCCAGCGTTCAATTGTCGTC 60.136 52.381 19.89 14.54 0.00 4.20
4196 4347 1.148310 CCAGCGTTCAATTGTCGTCT 58.852 50.000 19.89 15.87 0.00 4.18
4197 4348 2.029739 TCCAGCGTTCAATTGTCGTCTA 60.030 45.455 19.89 7.42 0.00 2.59
4282 4437 3.055819 TGGGTGTCAGCTTGTCTAATCTC 60.056 47.826 1.41 0.00 0.00 2.75
4311 4495 3.729217 TGAATATGATCTCGTTCGTTCGC 59.271 43.478 0.00 0.00 0.00 4.70
4335 4519 6.345565 GCTGCGGTAAAGATATAAACTACACG 60.346 42.308 0.00 0.00 0.00 4.49
4336 4520 6.563422 TGCGGTAAAGATATAAACTACACGT 58.437 36.000 0.00 0.00 0.00 4.49
4363 4564 5.351189 ACACACATACGTACGTACACTGATA 59.649 40.000 28.99 8.02 33.01 2.15
4377 4578 5.273674 ACACTGATAGATGTGACCATGAG 57.726 43.478 0.00 0.00 37.59 2.90
4411 4616 2.335316 AAGAAAGGTTGCACCGTACA 57.665 45.000 0.00 0.00 44.90 2.90
4557 4762 1.674221 GCTCCTGATTCGTGTCAAGCT 60.674 52.381 8.31 0.00 32.06 3.74
4560 4765 0.445436 CTGATTCGTGTCAAGCTGCC 59.555 55.000 0.00 0.00 0.00 4.85
4583 4788 4.776322 TGCTTAGTGGCCGCGCAT 62.776 61.111 11.42 0.00 0.00 4.73
4584 4789 2.587753 GCTTAGTGGCCGCGCATA 60.588 61.111 11.42 0.00 0.00 3.14
4585 4790 2.177580 GCTTAGTGGCCGCGCATAA 61.178 57.895 11.42 3.44 0.00 1.90
4586 4791 1.641677 CTTAGTGGCCGCGCATAAC 59.358 57.895 11.42 0.00 0.00 1.89
4587 4792 1.772063 CTTAGTGGCCGCGCATAACC 61.772 60.000 11.42 2.74 0.00 2.85
4614 4819 2.507992 GTGCGAGCTCGTGATGCT 60.508 61.111 34.46 0.00 44.24 3.79
4619 4824 0.099613 CGAGCTCGTGATGCTACTGT 59.900 55.000 27.79 0.00 41.30 3.55
4630 4835 4.276183 GTGATGCTACTGTACAGCTAGCTA 59.724 45.833 33.11 25.96 39.83 3.32
4631 4836 4.517075 TGATGCTACTGTACAGCTAGCTAG 59.483 45.833 33.11 24.19 39.83 3.42
4642 4847 2.350738 CTAGCTAGCAGGGGAGAGC 58.649 63.158 18.83 0.00 35.07 4.09
4643 4848 0.178964 CTAGCTAGCAGGGGAGAGCT 60.179 60.000 18.83 0.42 46.69 4.09
4648 4853 0.545309 TAGCAGGGGAGAGCTTGTGT 60.545 55.000 0.00 0.00 42.05 3.72
4651 4856 1.242076 CAGGGGAGAGCTTGTGTTTG 58.758 55.000 0.00 0.00 0.00 2.93
4710 4915 5.740569 CAGCGAATAAAGATGGTCATTTGTG 59.259 40.000 0.00 0.00 0.00 3.33
4778 4989 2.033747 CGCAGCCACATATACAAACTCG 60.034 50.000 0.00 0.00 0.00 4.18
4795 5006 1.374125 CGTGCTGTGGATTCGTCCA 60.374 57.895 0.00 0.00 37.46 4.02
4878 5097 0.462759 GATGCTGTGGTCCTGGCTAC 60.463 60.000 0.00 0.00 0.00 3.58
4903 5122 0.243095 AGCTTAGCTTTGCTGCTTGC 59.757 50.000 0.00 2.60 43.74 4.01
4904 5123 0.243095 GCTTAGCTTTGCTGCTTGCT 59.757 50.000 15.78 15.78 43.74 3.91
4905 5124 1.978542 CTTAGCTTTGCTGCTTGCTG 58.021 50.000 19.00 0.00 43.74 4.41
4906 5125 0.038892 TTAGCTTTGCTGCTTGCTGC 60.039 50.000 19.00 15.80 43.74 5.25
4907 5126 0.892358 TAGCTTTGCTGCTTGCTGCT 60.892 50.000 21.38 14.44 43.74 4.24
4908 5127 1.733399 GCTTTGCTGCTTGCTGCTC 60.733 57.895 21.38 7.93 43.37 4.26
4909 5128 1.658114 CTTTGCTGCTTGCTGCTCA 59.342 52.632 21.38 8.80 43.37 4.26
4910 5129 0.387367 CTTTGCTGCTTGCTGCTCAG 60.387 55.000 21.38 14.36 43.37 3.35
4911 5130 1.105167 TTTGCTGCTTGCTGCTCAGT 61.105 50.000 21.38 0.00 43.37 3.41
4912 5131 1.792118 TTGCTGCTTGCTGCTCAGTG 61.792 55.000 21.38 0.00 43.37 3.66
4913 5132 1.964891 GCTGCTTGCTGCTCAGTGA 60.965 57.895 15.47 0.00 43.37 3.41
4926 5145 2.961721 AGTGACAGTGTGCACGCG 60.962 61.111 23.74 19.84 39.88 6.01
5012 5232 1.143183 CGGTAACCTGGCACGCTAT 59.857 57.895 0.00 0.00 0.00 2.97
5093 5313 2.158900 CCTTGGGCGATCACTCATTAGT 60.159 50.000 0.00 0.00 35.91 2.24
5094 5314 3.069586 CCTTGGGCGATCACTCATTAGTA 59.930 47.826 0.00 0.00 33.48 1.82
5204 5453 5.824429 CACAATGATTCGGTGCATATTCTT 58.176 37.500 0.00 0.00 0.00 2.52
5285 5534 1.687297 AAAGGGCCGCTAGCTAGGAC 61.687 60.000 22.10 9.71 43.05 3.85
5388 5637 2.562912 CGCCGGCATATCATTGGC 59.437 61.111 28.98 0.00 42.29 4.52
5495 5757 0.729116 AATCGAAGCACTGCCAATCG 59.271 50.000 12.75 12.75 33.29 3.34
5520 5799 2.111041 GCACAATAATGCGCCTTCTC 57.889 50.000 4.18 0.00 35.50 2.87
5521 5800 1.672881 GCACAATAATGCGCCTTCTCT 59.327 47.619 4.18 0.00 35.50 3.10
5522 5801 2.540361 GCACAATAATGCGCCTTCTCTG 60.540 50.000 4.18 2.44 35.50 3.35
5523 5802 2.032550 CACAATAATGCGCCTTCTCTGG 59.967 50.000 4.18 0.00 0.00 3.86
5524 5803 1.605710 CAATAATGCGCCTTCTCTGGG 59.394 52.381 4.18 0.00 0.00 4.45
5525 5804 0.839946 ATAATGCGCCTTCTCTGGGT 59.160 50.000 4.18 0.00 0.00 4.51
5526 5805 0.178068 TAATGCGCCTTCTCTGGGTC 59.822 55.000 4.18 0.00 0.00 4.46
5527 5806 1.557269 AATGCGCCTTCTCTGGGTCT 61.557 55.000 4.18 0.00 0.00 3.85
5528 5807 2.125350 GCGCCTTCTCTGGGTCTG 60.125 66.667 0.00 0.00 0.00 3.51
5529 5808 2.581354 CGCCTTCTCTGGGTCTGG 59.419 66.667 0.00 0.00 0.00 3.86
5530 5809 2.993853 GCCTTCTCTGGGTCTGGG 59.006 66.667 0.00 0.00 0.00 4.45
5531 5810 1.920835 GCCTTCTCTGGGTCTGGGT 60.921 63.158 0.00 0.00 0.00 4.51
5532 5811 1.904990 GCCTTCTCTGGGTCTGGGTC 61.905 65.000 0.00 0.00 0.00 4.46
5533 5812 0.252467 CCTTCTCTGGGTCTGGGTCT 60.252 60.000 0.00 0.00 0.00 3.85
5574 5853 2.495084 GTTCCTCACCTGTTTGTCCTC 58.505 52.381 0.00 0.00 0.00 3.71
5576 5855 1.059913 CCTCACCTGTTTGTCCTCCT 58.940 55.000 0.00 0.00 0.00 3.69
5577 5856 1.271054 CCTCACCTGTTTGTCCTCCTG 60.271 57.143 0.00 0.00 0.00 3.86
5578 5857 0.108585 TCACCTGTTTGTCCTCCTGC 59.891 55.000 0.00 0.00 0.00 4.85
5580 5859 0.773644 ACCTGTTTGTCCTCCTGCAT 59.226 50.000 0.00 0.00 0.00 3.96
5581 5860 1.171308 CCTGTTTGTCCTCCTGCATG 58.829 55.000 0.00 0.00 0.00 4.06
5582 5861 0.524862 CTGTTTGTCCTCCTGCATGC 59.475 55.000 11.82 11.82 0.00 4.06
5583 5862 0.178995 TGTTTGTCCTCCTGCATGCA 60.179 50.000 21.29 21.29 0.00 3.96
5584 5863 1.180029 GTTTGTCCTCCTGCATGCAT 58.820 50.000 22.97 0.00 0.00 3.96
5585 5864 1.135199 GTTTGTCCTCCTGCATGCATG 60.135 52.381 22.97 22.70 0.00 4.06
5638 5917 4.541973 ATCAGTGACTCTGCACACAATA 57.458 40.909 7.79 0.00 43.32 1.90
5659 5939 9.058174 ACAATAGAGTACTATACAGTAGTGCTG 57.942 37.037 6.69 6.69 40.36 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.351017 CCTCTTCTTTGGTGGTGGCTA 59.649 52.381 0.00 0.00 0.00 3.93
1 2 0.111253 CCTCTTCTTTGGTGGTGGCT 59.889 55.000 0.00 0.00 0.00 4.75
2 3 0.110486 TCCTCTTCTTTGGTGGTGGC 59.890 55.000 0.00 0.00 0.00 5.01
3 4 1.878102 CGTCCTCTTCTTTGGTGGTGG 60.878 57.143 0.00 0.00 0.00 4.61
4 5 1.512926 CGTCCTCTTCTTTGGTGGTG 58.487 55.000 0.00 0.00 0.00 4.17
5 6 0.396811 CCGTCCTCTTCTTTGGTGGT 59.603 55.000 0.00 0.00 0.00 4.16
6 7 0.685097 TCCGTCCTCTTCTTTGGTGG 59.315 55.000 0.00 0.00 0.00 4.61
7 8 2.622436 GATCCGTCCTCTTCTTTGGTG 58.378 52.381 0.00 0.00 0.00 4.17
8 9 1.555533 GGATCCGTCCTCTTCTTTGGT 59.444 52.381 0.00 0.00 41.60 3.67
9 10 1.471676 CGGATCCGTCCTCTTCTTTGG 60.472 57.143 26.35 0.00 42.73 3.28
10 11 1.476891 TCGGATCCGTCCTCTTCTTTG 59.523 52.381 32.15 0.87 42.73 2.77
11 12 1.848652 TCGGATCCGTCCTCTTCTTT 58.151 50.000 32.15 0.00 42.73 2.52
12 13 1.477295 GTTCGGATCCGTCCTCTTCTT 59.523 52.381 32.15 0.00 42.73 2.52
13 14 1.104630 GTTCGGATCCGTCCTCTTCT 58.895 55.000 32.15 0.00 42.73 2.85
14 15 0.248539 CGTTCGGATCCGTCCTCTTC 60.249 60.000 32.15 14.61 42.73 2.87
15 16 1.664321 CCGTTCGGATCCGTCCTCTT 61.664 60.000 32.15 0.00 42.73 2.85
16 17 2.119655 CCGTTCGGATCCGTCCTCT 61.120 63.158 32.15 0.00 42.73 3.69
17 18 2.061182 CTCCGTTCGGATCCGTCCTC 62.061 65.000 32.15 18.93 42.73 3.71
18 19 2.044650 TCCGTTCGGATCCGTCCT 60.045 61.111 32.15 0.00 42.73 3.85
19 20 2.412112 CTCCGTTCGGATCCGTCC 59.588 66.667 32.15 21.88 41.40 4.79
20 21 2.278661 GCTCCGTTCGGATCCGTC 60.279 66.667 32.15 23.71 40.74 4.79
21 22 4.189188 CGCTCCGTTCGGATCCGT 62.189 66.667 32.15 0.00 40.74 4.69
22 23 3.405592 TTCGCTCCGTTCGGATCCG 62.406 63.158 28.62 28.62 41.35 4.18
23 24 1.589196 CTTCGCTCCGTTCGGATCC 60.589 63.158 14.34 0.00 33.34 3.36
24 25 2.231618 GCTTCGCTCCGTTCGGATC 61.232 63.158 14.34 9.52 33.34 3.36
25 26 2.202756 GCTTCGCTCCGTTCGGAT 60.203 61.111 14.34 0.00 33.34 4.18
26 27 4.430765 GGCTTCGCTCCGTTCGGA 62.431 66.667 13.34 13.34 0.00 4.55
27 28 4.735132 TGGCTTCGCTCCGTTCGG 62.735 66.667 4.74 4.74 0.00 4.30
28 29 2.025359 GAATGGCTTCGCTCCGTTCG 62.025 60.000 6.62 0.00 39.12 3.95
29 30 1.706287 GGAATGGCTTCGCTCCGTTC 61.706 60.000 11.50 11.50 44.79 3.95
30 31 1.745489 GGAATGGCTTCGCTCCGTT 60.745 57.895 0.00 0.00 35.64 4.44
31 32 2.125106 GGAATGGCTTCGCTCCGT 60.125 61.111 0.00 0.00 31.75 4.69
32 33 1.884926 GAGGAATGGCTTCGCTCCG 60.885 63.158 0.00 0.00 32.91 4.63
33 34 1.524849 GGAGGAATGGCTTCGCTCC 60.525 63.158 13.09 13.09 39.51 4.70
34 35 0.107459 AAGGAGGAATGGCTTCGCTC 60.107 55.000 0.00 0.00 32.39 5.03
35 36 0.107459 GAAGGAGGAATGGCTTCGCT 60.107 55.000 0.00 0.00 31.75 4.93
36 37 0.392998 TGAAGGAGGAATGGCTTCGC 60.393 55.000 0.00 0.00 31.75 4.70
37 38 1.373570 GTGAAGGAGGAATGGCTTCG 58.626 55.000 0.00 0.00 31.75 3.79
38 39 1.004745 TGGTGAAGGAGGAATGGCTTC 59.995 52.381 0.00 0.00 0.00 3.86
39 40 1.005215 CTGGTGAAGGAGGAATGGCTT 59.995 52.381 0.00 0.00 0.00 4.35
40 41 0.622665 CTGGTGAAGGAGGAATGGCT 59.377 55.000 0.00 0.00 0.00 4.75
41 42 1.034292 GCTGGTGAAGGAGGAATGGC 61.034 60.000 0.00 0.00 0.00 4.40
42 43 0.622665 AGCTGGTGAAGGAGGAATGG 59.377 55.000 0.00 0.00 0.00 3.16
43 44 1.280133 TGAGCTGGTGAAGGAGGAATG 59.720 52.381 0.00 0.00 0.00 2.67
44 45 1.280421 GTGAGCTGGTGAAGGAGGAAT 59.720 52.381 0.00 0.00 0.00 3.01
45 46 0.687354 GTGAGCTGGTGAAGGAGGAA 59.313 55.000 0.00 0.00 0.00 3.36
46 47 1.194781 GGTGAGCTGGTGAAGGAGGA 61.195 60.000 0.00 0.00 0.00 3.71
47 48 1.298014 GGTGAGCTGGTGAAGGAGG 59.702 63.158 0.00 0.00 0.00 4.30
48 49 1.298014 GGGTGAGCTGGTGAAGGAG 59.702 63.158 0.00 0.00 0.00 3.69
49 50 2.583441 CGGGTGAGCTGGTGAAGGA 61.583 63.158 0.00 0.00 0.00 3.36
50 51 2.046892 CGGGTGAGCTGGTGAAGG 60.047 66.667 0.00 0.00 0.00 3.46
51 52 1.079543 CTCGGGTGAGCTGGTGAAG 60.080 63.158 0.00 0.00 34.96 3.02
52 53 3.059982 CTCGGGTGAGCTGGTGAA 58.940 61.111 0.00 0.00 34.96 3.18
60 61 0.318441 TGTTCTTGAGCTCGGGTGAG 59.682 55.000 9.64 2.15 45.49 3.51
61 62 0.033504 GTGTTCTTGAGCTCGGGTGA 59.966 55.000 9.64 1.52 0.00 4.02
62 63 0.951040 GGTGTTCTTGAGCTCGGGTG 60.951 60.000 9.64 0.00 0.00 4.61
63 64 1.122019 AGGTGTTCTTGAGCTCGGGT 61.122 55.000 9.64 0.00 0.00 5.28
64 65 0.390472 GAGGTGTTCTTGAGCTCGGG 60.390 60.000 9.64 4.27 0.00 5.14
65 66 0.318441 TGAGGTGTTCTTGAGCTCGG 59.682 55.000 9.64 4.66 40.21 4.63
66 67 2.094286 AGATGAGGTGTTCTTGAGCTCG 60.094 50.000 9.64 0.00 40.21 5.03
67 68 3.195396 AGAGATGAGGTGTTCTTGAGCTC 59.805 47.826 6.82 6.82 38.25 4.09
68 69 3.172339 AGAGATGAGGTGTTCTTGAGCT 58.828 45.455 0.00 0.00 0.00 4.09
69 70 3.608316 AGAGATGAGGTGTTCTTGAGC 57.392 47.619 0.00 0.00 0.00 4.26
70 71 5.144692 TCAAGAGATGAGGTGTTCTTGAG 57.855 43.478 10.70 0.00 46.22 3.02
82 83 3.118482 GGATGAACAGCCTCAAGAGATGA 60.118 47.826 1.61 0.00 33.23 2.92
83 84 3.204526 GGATGAACAGCCTCAAGAGATG 58.795 50.000 1.61 0.15 33.23 2.90
84 85 2.842496 TGGATGAACAGCCTCAAGAGAT 59.158 45.455 10.39 0.00 37.85 2.75
85 86 2.027745 GTGGATGAACAGCCTCAAGAGA 60.028 50.000 10.39 0.00 37.85 3.10
86 87 2.027377 AGTGGATGAACAGCCTCAAGAG 60.027 50.000 10.39 0.00 37.85 2.85
87 88 1.980765 AGTGGATGAACAGCCTCAAGA 59.019 47.619 10.39 0.00 37.85 3.02
88 89 2.082231 CAGTGGATGAACAGCCTCAAG 58.918 52.381 10.39 1.03 37.85 3.02
89 90 1.421268 ACAGTGGATGAACAGCCTCAA 59.579 47.619 10.39 0.00 37.85 3.02
90 91 1.059098 ACAGTGGATGAACAGCCTCA 58.941 50.000 10.39 0.00 37.85 3.86
91 92 2.234908 AGTACAGTGGATGAACAGCCTC 59.765 50.000 10.39 6.83 37.85 4.70
92 93 2.260822 AGTACAGTGGATGAACAGCCT 58.739 47.619 10.39 0.00 37.85 4.58
93 94 2.770164 AGTACAGTGGATGAACAGCC 57.230 50.000 1.88 1.88 37.40 4.85
94 95 4.457834 ACTAGTACAGTGGATGAACAGC 57.542 45.455 0.00 0.00 35.62 4.40
95 96 6.025749 TGAACTAGTACAGTGGATGAACAG 57.974 41.667 0.00 0.00 37.63 3.16
96 97 6.351033 GGATGAACTAGTACAGTGGATGAACA 60.351 42.308 0.00 0.00 37.63 3.18
97 98 6.043411 GGATGAACTAGTACAGTGGATGAAC 58.957 44.000 0.00 0.00 37.63 3.18
98 99 5.958380 AGGATGAACTAGTACAGTGGATGAA 59.042 40.000 0.00 0.00 37.63 2.57
99 100 5.519808 AGGATGAACTAGTACAGTGGATGA 58.480 41.667 0.00 0.00 37.63 2.92
100 101 5.360999 TGAGGATGAACTAGTACAGTGGATG 59.639 44.000 0.00 0.00 37.63 3.51
101 102 5.519808 TGAGGATGAACTAGTACAGTGGAT 58.480 41.667 0.00 0.00 37.63 3.41
102 103 4.930696 TGAGGATGAACTAGTACAGTGGA 58.069 43.478 0.00 0.00 37.63 4.02
103 104 4.440802 GCTGAGGATGAACTAGTACAGTGG 60.441 50.000 0.00 0.00 37.63 4.00
104 105 4.440802 GGCTGAGGATGAACTAGTACAGTG 60.441 50.000 0.00 0.00 37.63 3.66
105 106 3.702045 GGCTGAGGATGAACTAGTACAGT 59.298 47.826 0.00 0.00 40.05 3.55
106 107 3.068873 GGGCTGAGGATGAACTAGTACAG 59.931 52.174 0.00 0.00 0.00 2.74
107 108 3.031736 GGGCTGAGGATGAACTAGTACA 58.968 50.000 0.00 0.00 0.00 2.90
108 109 2.365941 GGGGCTGAGGATGAACTAGTAC 59.634 54.545 0.00 0.00 0.00 2.73
109 110 2.247635 AGGGGCTGAGGATGAACTAGTA 59.752 50.000 0.00 0.00 0.00 1.82
110 111 1.008938 AGGGGCTGAGGATGAACTAGT 59.991 52.381 0.00 0.00 0.00 2.57
111 112 1.691434 GAGGGGCTGAGGATGAACTAG 59.309 57.143 0.00 0.00 0.00 2.57
112 113 1.794714 GAGGGGCTGAGGATGAACTA 58.205 55.000 0.00 0.00 0.00 2.24
113 114 1.333636 CGAGGGGCTGAGGATGAACT 61.334 60.000 0.00 0.00 0.00 3.01
114 115 1.144936 CGAGGGGCTGAGGATGAAC 59.855 63.158 0.00 0.00 0.00 3.18
115 116 1.001631 TCGAGGGGCTGAGGATGAA 59.998 57.895 0.00 0.00 0.00 2.57
116 117 1.456518 CTCGAGGGGCTGAGGATGA 60.457 63.158 3.91 0.00 0.00 2.92
117 118 3.136750 CTCGAGGGGCTGAGGATG 58.863 66.667 3.91 0.00 0.00 3.51
126 127 2.190578 GTGGATTGCCTCGAGGGG 59.809 66.667 32.06 10.20 35.18 4.79
127 128 2.190578 GGTGGATTGCCTCGAGGG 59.809 66.667 32.06 14.53 35.18 4.30
128 129 0.322456 TTTGGTGGATTGCCTCGAGG 60.322 55.000 27.83 27.83 38.53 4.63
129 130 1.470098 CTTTTGGTGGATTGCCTCGAG 59.530 52.381 5.13 5.13 34.31 4.04
130 131 1.533625 CTTTTGGTGGATTGCCTCGA 58.466 50.000 0.00 0.00 34.31 4.04
131 132 0.527565 CCTTTTGGTGGATTGCCTCG 59.472 55.000 0.00 0.00 34.31 4.63
132 133 0.247460 GCCTTTTGGTGGATTGCCTC 59.753 55.000 0.00 0.00 42.99 4.70
133 134 0.178924 AGCCTTTTGGTGGATTGCCT 60.179 50.000 0.00 0.00 42.99 4.75
134 135 0.037046 CAGCCTTTTGGTGGATTGCC 60.037 55.000 0.00 0.00 42.99 4.52
135 136 3.520187 CAGCCTTTTGGTGGATTGC 57.480 52.632 0.00 0.00 42.99 3.56
141 142 1.614317 CCCTACTCCAGCCTTTTGGTG 60.614 57.143 0.00 0.00 42.99 4.17
142 143 0.698818 CCCTACTCCAGCCTTTTGGT 59.301 55.000 0.00 0.00 42.99 3.67
143 144 0.698818 ACCCTACTCCAGCCTTTTGG 59.301 55.000 0.00 0.00 44.18 3.28
144 145 3.933861 ATACCCTACTCCAGCCTTTTG 57.066 47.619 0.00 0.00 0.00 2.44
145 146 4.786454 TGTAATACCCTACTCCAGCCTTTT 59.214 41.667 0.00 0.00 0.00 2.27
146 147 4.163649 GTGTAATACCCTACTCCAGCCTTT 59.836 45.833 0.00 0.00 0.00 3.11
147 148 3.710165 GTGTAATACCCTACTCCAGCCTT 59.290 47.826 0.00 0.00 0.00 4.35
148 149 3.306613 GTGTAATACCCTACTCCAGCCT 58.693 50.000 0.00 0.00 0.00 4.58
149 150 2.367894 GGTGTAATACCCTACTCCAGCC 59.632 54.545 0.00 0.00 44.15 4.85
150 151 3.747854 GGTGTAATACCCTACTCCAGC 57.252 52.381 0.00 0.00 44.15 4.85
171 172 4.966787 TGGTTCGGGCCACCTTGC 62.967 66.667 13.69 0.00 35.07 4.01
172 173 2.672996 CTGGTTCGGGCCACCTTG 60.673 66.667 13.69 3.95 35.07 3.61
173 174 3.966543 CCTGGTTCGGGCCACCTT 61.967 66.667 13.69 0.00 35.07 3.50
174 175 2.833151 TATCCTGGTTCGGGCCACCT 62.833 60.000 13.69 0.00 35.07 4.00
175 176 1.917336 TTATCCTGGTTCGGGCCACC 61.917 60.000 4.39 4.00 34.36 4.61
176 177 0.034863 TTTATCCTGGTTCGGGCCAC 60.035 55.000 4.39 0.00 34.36 5.01
177 178 0.034863 GTTTATCCTGGTTCGGGCCA 60.035 55.000 4.39 0.00 36.97 5.36
178 179 0.255033 AGTTTATCCTGGTTCGGGCC 59.745 55.000 0.00 0.00 0.00 5.80
179 180 1.339727 ACAGTTTATCCTGGTTCGGGC 60.340 52.381 0.00 0.00 36.75 6.13
180 181 2.747446 CAACAGTTTATCCTGGTTCGGG 59.253 50.000 0.00 0.00 36.75 5.14
181 182 3.188460 CACAACAGTTTATCCTGGTTCGG 59.812 47.826 0.00 0.00 36.75 4.30
182 183 3.813166 ACACAACAGTTTATCCTGGTTCG 59.187 43.478 0.00 0.00 36.75 3.95
183 184 5.063880 AGACACAACAGTTTATCCTGGTTC 58.936 41.667 0.00 0.00 36.75 3.62
184 185 5.048846 AGACACAACAGTTTATCCTGGTT 57.951 39.130 0.00 0.00 36.75 3.67
185 186 4.348168 AGAGACACAACAGTTTATCCTGGT 59.652 41.667 0.00 0.00 36.75 4.00
186 187 4.899502 AGAGACACAACAGTTTATCCTGG 58.100 43.478 0.00 0.00 36.75 4.45
187 188 5.636965 CAGAGAGACACAACAGTTTATCCTG 59.363 44.000 0.00 0.00 38.45 3.86
188 189 5.305644 ACAGAGAGACACAACAGTTTATCCT 59.694 40.000 0.00 0.00 0.00 3.24
189 190 5.542779 ACAGAGAGACACAACAGTTTATCC 58.457 41.667 0.00 0.00 0.00 2.59
190 191 6.451393 AGACAGAGAGACACAACAGTTTATC 58.549 40.000 0.00 0.00 0.00 1.75
191 192 6.266558 AGAGACAGAGAGACACAACAGTTTAT 59.733 38.462 0.00 0.00 0.00 1.40
192 193 5.594725 AGAGACAGAGAGACACAACAGTTTA 59.405 40.000 0.00 0.00 0.00 2.01
193 194 4.404073 AGAGACAGAGAGACACAACAGTTT 59.596 41.667 0.00 0.00 0.00 2.66
194 195 3.957497 AGAGACAGAGAGACACAACAGTT 59.043 43.478 0.00 0.00 0.00 3.16
195 196 3.561143 AGAGACAGAGAGACACAACAGT 58.439 45.455 0.00 0.00 0.00 3.55
196 197 4.582701 AAGAGACAGAGAGACACAACAG 57.417 45.455 0.00 0.00 0.00 3.16
197 198 4.402474 TCAAAGAGACAGAGAGACACAACA 59.598 41.667 0.00 0.00 0.00 3.33
198 199 4.938080 TCAAAGAGACAGAGAGACACAAC 58.062 43.478 0.00 0.00 0.00 3.32
199 200 4.500545 GCTCAAAGAGACAGAGAGACACAA 60.501 45.833 0.00 0.00 0.00 3.33
200 201 3.005261 GCTCAAAGAGACAGAGAGACACA 59.995 47.826 0.00 0.00 0.00 3.72
201 202 3.255642 AGCTCAAAGAGACAGAGAGACAC 59.744 47.826 0.00 0.00 0.00 3.67
202 203 3.495331 AGCTCAAAGAGACAGAGAGACA 58.505 45.455 0.00 0.00 0.00 3.41
203 204 3.505680 TGAGCTCAAAGAGACAGAGAGAC 59.494 47.826 15.67 0.00 0.00 3.36
204 205 3.505680 GTGAGCTCAAAGAGACAGAGAGA 59.494 47.826 20.19 0.00 0.00 3.10
205 206 3.670359 CGTGAGCTCAAAGAGACAGAGAG 60.670 52.174 20.19 0.00 0.00 3.20
206 207 2.227626 CGTGAGCTCAAAGAGACAGAGA 59.772 50.000 20.19 0.00 0.00 3.10
207 208 2.594321 CGTGAGCTCAAAGAGACAGAG 58.406 52.381 20.19 0.00 0.00 3.35
208 209 2.713895 CGTGAGCTCAAAGAGACAGA 57.286 50.000 20.19 0.00 0.00 3.41
222 223 2.882777 CACAGCCTAGCGCGTGAG 60.883 66.667 8.43 5.08 44.76 3.51
223 224 3.342370 CTCACAGCCTAGCGCGTGA 62.342 63.158 8.43 12.04 43.68 4.35
224 225 2.882777 CTCACAGCCTAGCGCGTG 60.883 66.667 8.43 2.70 44.76 5.34
225 226 4.135153 CCTCACAGCCTAGCGCGT 62.135 66.667 8.43 0.00 44.76 6.01
226 227 3.144120 ATCCTCACAGCCTAGCGCG 62.144 63.158 0.00 0.00 44.76 6.86
227 228 1.300542 GATCCTCACAGCCTAGCGC 60.301 63.158 0.00 0.00 37.98 5.92
228 229 1.007964 CGATCCTCACAGCCTAGCG 60.008 63.158 0.00 0.00 0.00 4.26
229 230 1.300542 GCGATCCTCACAGCCTAGC 60.301 63.158 0.00 0.00 0.00 3.42
230 231 1.007964 CGCGATCCTCACAGCCTAG 60.008 63.158 0.00 0.00 0.00 3.02
231 232 1.448119 CTCGCGATCCTCACAGCCTA 61.448 60.000 10.36 0.00 0.00 3.93
232 233 2.755876 TCGCGATCCTCACAGCCT 60.756 61.111 3.71 0.00 0.00 4.58
233 234 1.725557 TACTCGCGATCCTCACAGCC 61.726 60.000 10.36 0.00 0.00 4.85
234 235 0.317436 CTACTCGCGATCCTCACAGC 60.317 60.000 10.36 0.00 0.00 4.40
235 236 0.309302 CCTACTCGCGATCCTCACAG 59.691 60.000 10.36 0.00 0.00 3.66
236 237 1.725557 GCCTACTCGCGATCCTCACA 61.726 60.000 10.36 0.00 0.00 3.58
237 238 1.008309 GCCTACTCGCGATCCTCAC 60.008 63.158 10.36 0.00 0.00 3.51
238 239 1.448119 CTGCCTACTCGCGATCCTCA 61.448 60.000 10.36 3.63 0.00 3.86
239 240 1.284408 CTGCCTACTCGCGATCCTC 59.716 63.158 10.36 0.00 0.00 3.71
240 241 2.196925 CCTGCCTACTCGCGATCCT 61.197 63.158 10.36 0.00 0.00 3.24
241 242 2.336809 CCTGCCTACTCGCGATCC 59.663 66.667 10.36 0.00 0.00 3.36
242 243 2.355244 GCCTGCCTACTCGCGATC 60.355 66.667 10.36 0.00 0.00 3.69
243 244 2.835431 AGCCTGCCTACTCGCGAT 60.835 61.111 10.36 2.40 0.00 4.58
244 245 3.826754 CAGCCTGCCTACTCGCGA 61.827 66.667 9.26 9.26 0.00 5.87
245 246 4.880537 CCAGCCTGCCTACTCGCG 62.881 72.222 0.00 0.00 0.00 5.87
246 247 4.537433 CCCAGCCTGCCTACTCGC 62.537 72.222 0.00 0.00 0.00 5.03
247 248 1.739338 CTACCCAGCCTGCCTACTCG 61.739 65.000 0.00 0.00 0.00 4.18
248 249 1.403687 CCTACCCAGCCTGCCTACTC 61.404 65.000 0.00 0.00 0.00 2.59
249 250 1.383248 CCTACCCAGCCTGCCTACT 60.383 63.158 0.00 0.00 0.00 2.57
250 251 1.272554 AACCTACCCAGCCTGCCTAC 61.273 60.000 0.00 0.00 0.00 3.18
251 252 1.082206 AACCTACCCAGCCTGCCTA 59.918 57.895 0.00 0.00 0.00 3.93
252 253 2.204151 AACCTACCCAGCCTGCCT 60.204 61.111 0.00 0.00 0.00 4.75
253 254 2.044946 CAACCTACCCAGCCTGCC 60.045 66.667 0.00 0.00 0.00 4.85
254 255 1.078143 CTCAACCTACCCAGCCTGC 60.078 63.158 0.00 0.00 0.00 4.85
255 256 1.139853 GATCTCAACCTACCCAGCCTG 59.860 57.143 0.00 0.00 0.00 4.85
256 257 1.008938 AGATCTCAACCTACCCAGCCT 59.991 52.381 0.00 0.00 0.00 4.58
257 258 1.414550 GAGATCTCAACCTACCCAGCC 59.585 57.143 18.11 0.00 0.00 4.85
258 259 1.414550 GGAGATCTCAACCTACCCAGC 59.585 57.143 23.85 0.00 0.00 4.85
259 260 2.432510 GTGGAGATCTCAACCTACCCAG 59.567 54.545 23.85 0.00 0.00 4.45
260 261 2.225522 TGTGGAGATCTCAACCTACCCA 60.226 50.000 24.63 9.35 32.53 4.51
261 262 2.168728 GTGTGGAGATCTCAACCTACCC 59.831 54.545 24.63 6.82 32.53 3.69
262 263 2.159226 CGTGTGGAGATCTCAACCTACC 60.159 54.545 24.63 10.86 32.53 3.18
263 264 2.735762 GCGTGTGGAGATCTCAACCTAC 60.736 54.545 24.63 16.72 32.53 3.18
264 265 1.476891 GCGTGTGGAGATCTCAACCTA 59.523 52.381 24.63 6.96 32.53 3.08
265 266 0.247736 GCGTGTGGAGATCTCAACCT 59.752 55.000 24.63 0.00 32.53 3.50
266 267 0.037326 TGCGTGTGGAGATCTCAACC 60.037 55.000 24.63 15.70 32.53 3.77
267 268 1.071605 GTGCGTGTGGAGATCTCAAC 58.928 55.000 21.61 21.61 34.12 3.18
268 269 0.037326 GGTGCGTGTGGAGATCTCAA 60.037 55.000 23.85 10.78 0.00 3.02
269 270 1.591703 GGTGCGTGTGGAGATCTCA 59.408 57.895 23.85 7.82 0.00 3.27
270 271 1.153549 GGGTGCGTGTGGAGATCTC 60.154 63.158 14.75 14.75 0.00 2.75
271 272 2.982130 GGGTGCGTGTGGAGATCT 59.018 61.111 0.00 0.00 0.00 2.75
272 273 2.509336 CGGGTGCGTGTGGAGATC 60.509 66.667 0.00 0.00 0.00 2.75
273 274 2.994995 TCGGGTGCGTGTGGAGAT 60.995 61.111 0.00 0.00 0.00 2.75
274 275 3.680786 CTCGGGTGCGTGTGGAGA 61.681 66.667 0.00 0.00 0.00 3.71
275 276 3.991051 ACTCGGGTGCGTGTGGAG 61.991 66.667 0.00 0.00 0.00 3.86
276 277 4.293648 CACTCGGGTGCGTGTGGA 62.294 66.667 0.51 0.00 36.61 4.02
277 278 4.602259 ACACTCGGGTGCGTGTGG 62.602 66.667 17.26 0.00 42.19 4.17
278 279 2.587753 AACACTCGGGTGCGTGTG 60.588 61.111 17.26 0.00 42.92 3.82
279 280 2.279918 GAACACTCGGGTGCGTGT 60.280 61.111 17.26 0.00 45.51 4.49
280 281 3.403057 CGAACACTCGGGTGCGTG 61.403 66.667 17.26 0.41 46.57 5.34
281 282 3.141522 TTCGAACACTCGGGTGCGT 62.142 57.895 17.26 2.99 46.57 5.24
282 283 2.355363 TTCGAACACTCGGGTGCG 60.355 61.111 17.26 12.50 46.57 5.34
283 284 2.315386 GGTTCGAACACTCGGGTGC 61.315 63.158 28.24 0.00 46.57 5.01
284 285 0.666577 GAGGTTCGAACACTCGGGTG 60.667 60.000 28.24 15.49 45.49 4.61
285 286 0.826672 AGAGGTTCGAACACTCGGGT 60.827 55.000 28.24 13.70 45.49 5.28
286 287 0.388649 CAGAGGTTCGAACACTCGGG 60.389 60.000 28.24 21.63 45.49 5.14
287 288 0.596577 TCAGAGGTTCGAACACTCGG 59.403 55.000 28.24 26.75 45.49 4.63
288 289 2.320367 CTTCAGAGGTTCGAACACTCG 58.680 52.381 28.24 22.71 46.87 4.18
289 290 2.610727 CCCTTCAGAGGTTCGAACACTC 60.611 54.545 28.24 27.12 41.85 3.51
290 291 1.344763 CCCTTCAGAGGTTCGAACACT 59.655 52.381 28.24 22.22 41.85 3.55
291 292 1.070289 ACCCTTCAGAGGTTCGAACAC 59.930 52.381 28.24 20.51 41.85 3.32
292 293 1.420430 ACCCTTCAGAGGTTCGAACA 58.580 50.000 28.24 5.89 41.85 3.18
293 294 2.545537 AACCCTTCAGAGGTTCGAAC 57.454 50.000 20.14 20.14 44.42 3.95
299 300 1.073199 CCGCAAACCCTTCAGAGGT 59.927 57.895 0.00 0.00 41.85 3.85
300 301 0.250727 TTCCGCAAACCCTTCAGAGG 60.251 55.000 0.00 0.00 43.15 3.69
301 302 0.875059 GTTCCGCAAACCCTTCAGAG 59.125 55.000 0.00 0.00 31.20 3.35
302 303 0.181587 TGTTCCGCAAACCCTTCAGA 59.818 50.000 0.00 0.00 37.03 3.27
303 304 0.310854 GTGTTCCGCAAACCCTTCAG 59.689 55.000 0.00 0.00 37.03 3.02
304 305 1.440938 CGTGTTCCGCAAACCCTTCA 61.441 55.000 0.00 0.00 37.03 3.02
305 306 1.161563 TCGTGTTCCGCAAACCCTTC 61.162 55.000 0.00 0.00 37.03 3.46
306 307 0.748729 TTCGTGTTCCGCAAACCCTT 60.749 50.000 0.00 0.00 37.03 3.95
307 308 0.748729 TTTCGTGTTCCGCAAACCCT 60.749 50.000 0.00 0.00 37.03 4.34
308 309 0.312729 ATTTCGTGTTCCGCAAACCC 59.687 50.000 0.00 0.00 37.03 4.11
309 310 1.664874 GGATTTCGTGTTCCGCAAACC 60.665 52.381 0.00 0.00 37.03 3.27
310 311 1.681825 GGATTTCGTGTTCCGCAAAC 58.318 50.000 0.00 0.00 38.43 2.93
316 317 1.792006 ACTGTCGGATTTCGTGTTCC 58.208 50.000 0.00 0.00 40.32 3.62
317 318 2.340577 CGTACTGTCGGATTTCGTGTTC 59.659 50.000 0.00 0.00 40.32 3.18
318 319 2.287788 ACGTACTGTCGGATTTCGTGTT 60.288 45.455 0.00 0.00 40.32 3.32
319 320 1.267806 ACGTACTGTCGGATTTCGTGT 59.732 47.619 0.00 0.00 40.32 4.49
320 321 1.647213 CACGTACTGTCGGATTTCGTG 59.353 52.381 0.00 0.00 40.33 4.35
321 322 1.267806 ACACGTACTGTCGGATTTCGT 59.732 47.619 0.00 0.00 40.32 3.85
322 323 1.973138 ACACGTACTGTCGGATTTCG 58.027 50.000 0.00 0.00 40.90 3.46
323 324 3.311106 TCAACACGTACTGTCGGATTTC 58.689 45.455 0.00 0.00 34.94 2.17
324 325 3.243636 ACTCAACACGTACTGTCGGATTT 60.244 43.478 0.00 0.00 34.94 2.17
325 326 2.295349 ACTCAACACGTACTGTCGGATT 59.705 45.455 0.00 0.00 34.94 3.01
326 327 1.884579 ACTCAACACGTACTGTCGGAT 59.115 47.619 0.00 0.00 34.94 4.18
327 328 1.311859 ACTCAACACGTACTGTCGGA 58.688 50.000 0.00 0.00 34.94 4.55
328 329 2.049228 GAACTCAACACGTACTGTCGG 58.951 52.381 0.00 0.00 34.94 4.79
329 330 2.723209 TGAACTCAACACGTACTGTCG 58.277 47.619 0.00 0.00 30.29 4.35
330 331 4.857588 CCTATGAACTCAACACGTACTGTC 59.142 45.833 0.00 0.00 30.29 3.51
331 332 4.321750 CCCTATGAACTCAACACGTACTGT 60.322 45.833 0.00 0.00 32.89 3.55
332 333 4.082408 TCCCTATGAACTCAACACGTACTG 60.082 45.833 0.00 0.00 0.00 2.74
333 334 4.084287 TCCCTATGAACTCAACACGTACT 58.916 43.478 0.00 0.00 0.00 2.73
334 335 4.445452 TCCCTATGAACTCAACACGTAC 57.555 45.455 0.00 0.00 0.00 3.67
335 336 4.707934 TCATCCCTATGAACTCAACACGTA 59.292 41.667 0.00 0.00 39.20 3.57
336 337 3.513912 TCATCCCTATGAACTCAACACGT 59.486 43.478 0.00 0.00 39.20 4.49
337 338 4.115516 CTCATCCCTATGAACTCAACACG 58.884 47.826 0.00 0.00 41.57 4.49
338 339 3.873952 GCTCATCCCTATGAACTCAACAC 59.126 47.826 0.00 0.00 41.57 3.32
339 340 3.430790 CGCTCATCCCTATGAACTCAACA 60.431 47.826 0.00 0.00 41.57 3.33
340 341 3.126831 CGCTCATCCCTATGAACTCAAC 58.873 50.000 0.00 0.00 41.57 3.18
341 342 2.766263 ACGCTCATCCCTATGAACTCAA 59.234 45.455 0.00 0.00 41.57 3.02
342 343 2.388735 ACGCTCATCCCTATGAACTCA 58.611 47.619 0.00 0.00 41.57 3.41
343 344 4.021894 ACATACGCTCATCCCTATGAACTC 60.022 45.833 0.00 0.00 41.57 3.01
344 345 3.898123 ACATACGCTCATCCCTATGAACT 59.102 43.478 0.00 0.00 41.57 3.01
345 346 3.990469 CACATACGCTCATCCCTATGAAC 59.010 47.826 0.00 0.00 41.57 3.18
346 347 3.895041 TCACATACGCTCATCCCTATGAA 59.105 43.478 0.00 0.00 41.57 2.57
347 348 3.496331 TCACATACGCTCATCCCTATGA 58.504 45.455 0.00 0.00 39.87 2.15
348 349 3.842820 CTCACATACGCTCATCCCTATG 58.157 50.000 0.00 0.00 0.00 2.23
349 350 2.232452 GCTCACATACGCTCATCCCTAT 59.768 50.000 0.00 0.00 0.00 2.57
350 351 1.613925 GCTCACATACGCTCATCCCTA 59.386 52.381 0.00 0.00 0.00 3.53
351 352 0.390860 GCTCACATACGCTCATCCCT 59.609 55.000 0.00 0.00 0.00 4.20
352 353 0.104855 TGCTCACATACGCTCATCCC 59.895 55.000 0.00 0.00 0.00 3.85
353 354 2.064762 GATGCTCACATACGCTCATCC 58.935 52.381 0.00 0.00 36.35 3.51
354 355 3.023946 AGATGCTCACATACGCTCATC 57.976 47.619 0.00 0.00 36.35 2.92
355 356 3.319122 TGTAGATGCTCACATACGCTCAT 59.681 43.478 0.00 0.00 36.35 2.90
356 357 2.687935 TGTAGATGCTCACATACGCTCA 59.312 45.455 0.00 0.00 36.35 4.26
357 358 3.355626 TGTAGATGCTCACATACGCTC 57.644 47.619 0.00 0.00 36.35 5.03
358 359 4.327982 AATGTAGATGCTCACATACGCT 57.672 40.909 0.00 0.00 36.35 5.07
359 360 4.766007 CAAATGTAGATGCTCACATACGC 58.234 43.478 0.00 0.00 36.35 4.42
360 361 4.270808 TGCAAATGTAGATGCTCACATACG 59.729 41.667 0.00 0.00 42.97 3.06
361 362 5.295292 AGTGCAAATGTAGATGCTCACATAC 59.705 40.000 0.00 0.00 42.97 2.39
362 363 5.430886 AGTGCAAATGTAGATGCTCACATA 58.569 37.500 0.00 0.00 42.97 2.29
363 364 4.267536 AGTGCAAATGTAGATGCTCACAT 58.732 39.130 0.00 0.00 42.97 3.21
364 365 3.678289 AGTGCAAATGTAGATGCTCACA 58.322 40.909 0.00 0.00 42.97 3.58
365 366 5.801350 TTAGTGCAAATGTAGATGCTCAC 57.199 39.130 0.00 0.00 42.97 3.51
366 367 7.275183 AGTATTAGTGCAAATGTAGATGCTCA 58.725 34.615 0.00 0.00 42.97 4.26
367 368 7.721286 AGTATTAGTGCAAATGTAGATGCTC 57.279 36.000 0.00 0.00 42.97 4.26
368 369 9.613428 TTTAGTATTAGTGCAAATGTAGATGCT 57.387 29.630 0.00 0.00 42.97 3.79
441 443 9.561069 CACATGTAGGGCTAATTAAGTTTCTAT 57.439 33.333 0.00 0.00 0.00 1.98
476 478 9.032420 CCACGGCTACAAGTTTTTAAAATTTTA 57.968 29.630 6.54 6.54 0.00 1.52
480 484 6.394025 TCCACGGCTACAAGTTTTTAAAAT 57.606 33.333 0.55 0.00 0.00 1.82
591 597 1.069500 GGTGAAATTTCGACACGGGTG 60.069 52.381 13.34 0.00 35.68 4.61
607 613 1.142667 TGATGCAGTGAAGGTTGGTGA 59.857 47.619 0.00 0.00 0.00 4.02
612 618 3.446161 CCATGATTGATGCAGTGAAGGTT 59.554 43.478 0.00 0.00 0.00 3.50
682 689 6.823689 GGGAGAATCTTTGAACTAGCATGTTA 59.176 38.462 0.00 0.00 33.73 2.41
853 865 1.482621 CGATCGTTCTCCATGCCGTG 61.483 60.000 7.03 0.00 0.00 4.94
854 866 1.226974 CGATCGTTCTCCATGCCGT 60.227 57.895 7.03 0.00 0.00 5.68
855 867 1.209275 GACGATCGTTCTCCATGCCG 61.209 60.000 23.63 0.00 0.00 5.69
856 868 1.209275 CGACGATCGTTCTCCATGCC 61.209 60.000 23.63 4.94 34.72 4.40
857 869 1.209275 CCGACGATCGTTCTCCATGC 61.209 60.000 23.63 5.71 38.40 4.06
858 870 0.595053 CCCGACGATCGTTCTCCATG 60.595 60.000 23.63 6.50 38.40 3.66
859 871 1.734137 CCCGACGATCGTTCTCCAT 59.266 57.895 23.63 0.00 38.40 3.41
860 872 3.060020 GCCCGACGATCGTTCTCCA 62.060 63.158 23.63 0.00 38.40 3.86
861 873 2.278661 GCCCGACGATCGTTCTCC 60.279 66.667 23.63 8.46 38.40 3.71
949 961 1.199558 GCGGGTACTTATAGCTCGAGG 59.800 57.143 15.58 0.00 0.00 4.63
1332 1355 4.429522 TGCCGCATGGACATGGCT 62.430 61.111 13.63 0.00 39.16 4.75
1453 1476 3.786586 GAGCTCGTCGACGTCGGT 61.787 66.667 35.05 29.40 40.80 4.69
1491 1514 2.041762 AGGCAGGAGGGATGAGCA 59.958 61.111 0.00 0.00 0.00 4.26
1759 1783 1.243902 AACGTTGTATGTTGCAGGGG 58.756 50.000 0.00 0.00 0.00 4.79
1770 1794 1.955157 CGGCCGTGGAAACGTTGTA 60.955 57.895 19.50 0.00 0.00 2.41
1771 1795 3.273834 CGGCCGTGGAAACGTTGT 61.274 61.111 19.50 0.00 0.00 3.32
1826 1850 2.263077 AGACGACATCGATCAGCAAAC 58.737 47.619 8.54 0.00 43.02 2.93
1863 1891 3.875727 CTCCCTCATCTGCACAAATACAG 59.124 47.826 0.00 0.00 35.15 2.74
1903 1931 3.423154 GCCGTCGGGAAGTGCTTG 61.423 66.667 14.38 0.00 34.06 4.01
1961 1989 0.534873 GAGAGAGAGGTGAAGTGGCC 59.465 60.000 0.00 0.00 0.00 5.36
2296 2324 0.179108 ACGGGCTAGTCGCTTGATTC 60.179 55.000 7.38 0.00 39.13 2.52
2297 2325 0.460284 CACGGGCTAGTCGCTTGATT 60.460 55.000 7.38 0.00 39.13 2.57
2304 2332 2.202623 GCACTCACGGGCTAGTCG 60.203 66.667 6.17 6.17 0.00 4.18
2333 2361 1.195674 GCGAGAACAAAGCCAGAGTTC 59.804 52.381 0.00 0.00 41.37 3.01
2429 2457 1.458639 GGCATACATTGGAGCCTGGC 61.459 60.000 11.65 11.65 43.70 4.85
2457 2485 7.473366 AGTAGATGTTATATACGGCGATGAAG 58.527 38.462 16.62 0.00 32.47 3.02
2458 2486 7.336176 AGAGTAGATGTTATATACGGCGATGAA 59.664 37.037 16.62 0.00 32.47 2.57
2461 2489 7.049133 AGAGAGTAGATGTTATATACGGCGAT 58.951 38.462 16.62 5.41 32.47 4.58
2462 2490 6.404708 AGAGAGTAGATGTTATATACGGCGA 58.595 40.000 16.62 0.00 32.47 5.54
2463 2491 6.665474 AGAGAGTAGATGTTATATACGGCG 57.335 41.667 4.80 4.80 32.47 6.46
2464 2492 7.490725 TCGTAGAGAGTAGATGTTATATACGGC 59.509 40.741 0.00 0.00 34.61 5.68
2465 2493 8.806634 GTCGTAGAGAGTAGATGTTATATACGG 58.193 40.741 0.00 0.00 36.95 4.02
2467 2495 9.566530 TCGTCGTAGAGAGTAGATGTTATATAC 57.433 37.037 0.00 0.00 36.95 1.47
2469 2497 9.304731 GATCGTCGTAGAGAGTAGATGTTATAT 57.695 37.037 0.00 0.00 36.95 0.86
2470 2498 7.758980 GGATCGTCGTAGAGAGTAGATGTTATA 59.241 40.741 0.00 0.00 36.95 0.98
2471 2499 6.591062 GGATCGTCGTAGAGAGTAGATGTTAT 59.409 42.308 0.00 0.00 36.95 1.89
2472 2500 5.925397 GGATCGTCGTAGAGAGTAGATGTTA 59.075 44.000 0.00 0.00 36.95 2.41
2543 2616 1.227943 TTGGCACAGCACAGACTCC 60.228 57.895 0.00 0.00 42.39 3.85
2561 2634 3.151906 AGGAACTCGCTTGCAGGT 58.848 55.556 0.00 0.00 0.00 4.00
2591 2664 6.406624 GGCTGCTAGTGTAATTAAGTACCTCA 60.407 42.308 10.35 2.98 0.00 3.86
2614 2687 6.919721 TGTAAGGTAAATTGATTCAAGTGGC 58.080 36.000 5.21 0.00 0.00 5.01
2656 2729 5.057149 GGCTAGATAAACACGAATGGACAT 58.943 41.667 0.00 0.00 0.00 3.06
2669 2742 0.906066 TGCACCACCGGCTAGATAAA 59.094 50.000 0.00 0.00 0.00 1.40
2679 2752 4.742201 CCTCCTCGTGCACCACCG 62.742 72.222 12.15 0.00 0.00 4.94
2916 3009 1.955080 GATCGAGGACGGATGGTAACT 59.045 52.381 0.00 0.00 40.21 2.24
2921 3014 1.283181 GACGATCGAGGACGGATGG 59.717 63.158 24.34 0.00 40.21 3.51
2922 3015 1.082692 CGACGATCGAGGACGGATG 60.083 63.158 24.34 0.00 43.74 3.51
2923 3016 1.497223 GACGACGATCGAGGACGGAT 61.497 60.000 24.34 6.82 43.74 4.18
2924 3017 2.125391 ACGACGATCGAGGACGGA 60.125 61.111 24.34 0.00 43.74 4.69
2925 3018 2.091776 GAGACGACGATCGAGGACGG 62.092 65.000 24.34 6.23 43.74 4.79
2926 3019 1.273300 GAGACGACGATCGAGGACG 59.727 63.158 24.34 21.22 43.74 4.79
2927 3020 1.273300 CGAGACGACGATCGAGGAC 59.727 63.158 24.34 12.71 43.74 3.85
2930 3023 0.043737 CAGACGAGACGACGATCGAG 60.044 60.000 24.34 17.22 43.74 4.04
2931 3024 0.457337 TCAGACGAGACGACGATCGA 60.457 55.000 24.34 7.82 43.74 3.59
2932 3025 0.369248 TTCAGACGAGACGACGATCG 59.631 55.000 14.88 14.88 46.93 3.69
2933 3026 1.394227 ACTTCAGACGAGACGACGATC 59.606 52.381 0.00 0.00 37.03 3.69
2934 3027 1.394227 GACTTCAGACGAGACGACGAT 59.606 52.381 0.00 0.00 37.03 3.73
2935 3028 0.788995 GACTTCAGACGAGACGACGA 59.211 55.000 0.00 0.00 37.03 4.20
2936 3029 0.791422 AGACTTCAGACGAGACGACG 59.209 55.000 0.00 0.00 39.31 5.12
2937 3030 1.799403 TCAGACTTCAGACGAGACGAC 59.201 52.381 0.00 0.00 0.00 4.34
2938 3031 2.165319 TCAGACTTCAGACGAGACGA 57.835 50.000 0.00 0.00 0.00 4.20
2939 3032 2.224549 AGTTCAGACTTCAGACGAGACG 59.775 50.000 0.00 0.00 29.87 4.18
2940 3033 3.907894 AGTTCAGACTTCAGACGAGAC 57.092 47.619 0.00 0.00 29.87 3.36
2941 3034 4.215827 GGTTAGTTCAGACTTCAGACGAGA 59.784 45.833 0.00 0.00 37.33 4.04
2942 3035 4.023107 TGGTTAGTTCAGACTTCAGACGAG 60.023 45.833 0.00 0.00 37.33 4.18
2943 3036 3.887110 TGGTTAGTTCAGACTTCAGACGA 59.113 43.478 0.00 0.00 37.33 4.20
2944 3037 3.982058 GTGGTTAGTTCAGACTTCAGACG 59.018 47.826 0.00 0.00 37.33 4.18
2945 3038 5.010213 AGAGTGGTTAGTTCAGACTTCAGAC 59.990 44.000 0.00 0.00 37.33 3.51
2946 3039 5.141182 AGAGTGGTTAGTTCAGACTTCAGA 58.859 41.667 0.00 0.00 37.33 3.27
2947 3040 5.461032 AGAGTGGTTAGTTCAGACTTCAG 57.539 43.478 0.00 0.00 37.33 3.02
2948 3041 4.281182 GGAGAGTGGTTAGTTCAGACTTCA 59.719 45.833 0.00 0.00 37.33 3.02
2949 3042 4.525100 AGGAGAGTGGTTAGTTCAGACTTC 59.475 45.833 0.00 0.00 37.33 3.01
2950 3043 4.484912 AGGAGAGTGGTTAGTTCAGACTT 58.515 43.478 0.00 0.00 37.33 3.01
2951 3044 4.083565 GAGGAGAGTGGTTAGTTCAGACT 58.916 47.826 0.00 0.00 39.97 3.24
2958 3051 1.094269 AGGGGAGGAGAGTGGTTAGT 58.906 55.000 0.00 0.00 0.00 2.24
2975 3068 1.022735 GTTCCATCTCTGCATGCAGG 58.977 55.000 39.72 30.67 43.75 4.85
2976 3069 2.039818 AGTTCCATCTCTGCATGCAG 57.960 50.000 36.80 36.80 44.86 4.41
3104 3197 3.127548 GGTCAACTAATGCTGTGGTCATG 59.872 47.826 0.00 0.00 0.00 3.07
3106 3199 2.371841 AGGTCAACTAATGCTGTGGTCA 59.628 45.455 0.00 0.00 0.00 4.02
3155 3249 3.190535 CCTGTAAACAAATGGAGGTTCCG 59.809 47.826 0.00 0.00 40.17 4.30
3174 3268 2.492090 CCGGAGCTCGAAGACCTG 59.508 66.667 7.83 0.00 42.43 4.00
3269 3368 8.790718 ACACGAACGGAAGATATATAAGTATGT 58.209 33.333 0.00 0.00 0.00 2.29
3271 3370 9.006839 TGACACGAACGGAAGATATATAAGTAT 57.993 33.333 0.00 0.00 0.00 2.12
3372 3477 3.548268 CAGCGCACGGTTTCTTTTAAAAA 59.452 39.130 11.47 0.00 0.00 1.94
3373 3478 3.109619 CAGCGCACGGTTTCTTTTAAAA 58.890 40.909 11.47 0.00 0.00 1.52
3374 3479 2.355132 TCAGCGCACGGTTTCTTTTAAA 59.645 40.909 11.47 0.00 0.00 1.52
3375 3480 1.941294 TCAGCGCACGGTTTCTTTTAA 59.059 42.857 11.47 0.00 0.00 1.52
3376 3481 1.262151 GTCAGCGCACGGTTTCTTTTA 59.738 47.619 11.47 0.00 0.00 1.52
3381 3486 1.954146 TCTGTCAGCGCACGGTTTC 60.954 57.895 11.47 0.00 0.00 2.78
3397 3502 1.997874 GAGATGGGGCAGGGTGTCT 60.998 63.158 0.00 0.00 0.00 3.41
3411 3516 1.047002 CTGGCGAATCCTGGAGAGAT 58.953 55.000 1.52 0.00 35.26 2.75
3614 3719 2.182030 GACGACCTCCGCTTCCAG 59.818 66.667 0.00 0.00 43.32 3.86
3674 3785 1.001406 GTGCTAGGCTATAGCTGGTGG 59.999 57.143 23.53 11.88 40.95 4.61
3675 3786 1.688735 TGTGCTAGGCTATAGCTGGTG 59.311 52.381 23.53 12.53 40.95 4.17
3676 3787 1.967066 CTGTGCTAGGCTATAGCTGGT 59.033 52.381 23.53 11.55 40.95 4.00
3680 3791 2.828520 TGGATCTGTGCTAGGCTATAGC 59.171 50.000 16.78 16.78 40.76 2.97
3682 3793 4.524714 GTCTTGGATCTGTGCTAGGCTATA 59.475 45.833 0.00 0.00 0.00 1.31
3683 3794 3.323403 GTCTTGGATCTGTGCTAGGCTAT 59.677 47.826 0.00 0.00 0.00 2.97
3684 3795 2.695666 GTCTTGGATCTGTGCTAGGCTA 59.304 50.000 0.00 0.00 0.00 3.93
3685 3796 1.484240 GTCTTGGATCTGTGCTAGGCT 59.516 52.381 0.00 0.00 0.00 4.58
3686 3797 1.804372 CGTCTTGGATCTGTGCTAGGC 60.804 57.143 0.00 0.00 0.00 3.93
3687 3798 1.804372 GCGTCTTGGATCTGTGCTAGG 60.804 57.143 0.00 0.00 0.00 3.02
3689 3800 0.175760 GGCGTCTTGGATCTGTGCTA 59.824 55.000 0.00 0.00 0.00 3.49
3690 3801 1.078848 GGCGTCTTGGATCTGTGCT 60.079 57.895 0.00 0.00 0.00 4.40
3759 3874 1.382629 GGTGGGGTAGTGTTGGCAT 59.617 57.895 0.00 0.00 0.00 4.40
3964 4080 3.248363 CGGTCACTGTGTTATATGCATGG 59.752 47.826 10.16 0.00 0.00 3.66
3965 4081 4.025730 GTCGGTCACTGTGTTATATGCATG 60.026 45.833 10.16 0.00 0.00 4.06
3966 4082 4.119862 GTCGGTCACTGTGTTATATGCAT 58.880 43.478 3.79 3.79 0.00 3.96
3967 4083 3.517602 GTCGGTCACTGTGTTATATGCA 58.482 45.455 7.79 0.00 0.00 3.96
3968 4084 2.864343 GGTCGGTCACTGTGTTATATGC 59.136 50.000 7.79 0.00 0.00 3.14
3969 4085 3.113322 CGGTCGGTCACTGTGTTATATG 58.887 50.000 7.79 0.00 0.00 1.78
3970 4086 3.018856 TCGGTCGGTCACTGTGTTATAT 58.981 45.455 7.79 0.00 32.45 0.86
3971 4087 2.162208 GTCGGTCGGTCACTGTGTTATA 59.838 50.000 7.79 0.00 32.45 0.98
3972 4088 1.068055 GTCGGTCGGTCACTGTGTTAT 60.068 52.381 7.79 0.00 32.45 1.89
3973 4089 0.311790 GTCGGTCGGTCACTGTGTTA 59.688 55.000 7.79 0.00 32.45 2.41
3974 4090 1.066918 GTCGGTCGGTCACTGTGTT 59.933 57.895 7.79 0.00 32.45 3.32
3975 4091 2.726274 GTCGGTCGGTCACTGTGT 59.274 61.111 7.79 0.00 32.45 3.72
3986 4102 1.012841 CTAGGTAGACACGGTCGGTC 58.987 60.000 0.00 0.23 37.67 4.79
3995 4111 2.025226 AGCAGTAGTGGCTAGGTAGACA 60.025 50.000 0.00 0.00 40.47 3.41
3996 4112 2.359531 CAGCAGTAGTGGCTAGGTAGAC 59.640 54.545 0.00 0.00 40.23 2.59
3997 4113 2.656002 CAGCAGTAGTGGCTAGGTAGA 58.344 52.381 0.00 0.00 40.23 2.59
3998 4114 1.683917 CCAGCAGTAGTGGCTAGGTAG 59.316 57.143 0.00 0.00 40.23 3.18
3999 4115 1.006758 ACCAGCAGTAGTGGCTAGGTA 59.993 52.381 0.00 0.00 40.23 3.08
4000 4116 0.252284 ACCAGCAGTAGTGGCTAGGT 60.252 55.000 0.00 5.37 40.23 3.08
4001 4117 0.461961 GACCAGCAGTAGTGGCTAGG 59.538 60.000 0.00 4.85 40.23 3.02
4002 4118 1.479709 AGACCAGCAGTAGTGGCTAG 58.520 55.000 0.00 0.00 40.23 3.42
4003 4119 2.025226 AGTAGACCAGCAGTAGTGGCTA 60.025 50.000 0.00 0.00 40.23 3.93
4004 4120 1.187087 GTAGACCAGCAGTAGTGGCT 58.813 55.000 0.00 0.00 43.77 4.75
4005 4121 1.187087 AGTAGACCAGCAGTAGTGGC 58.813 55.000 0.00 0.00 38.83 5.01
4006 4122 3.622630 ACTAGTAGACCAGCAGTAGTGG 58.377 50.000 3.59 0.00 41.30 4.00
4011 4135 4.847990 AGAGTACTAGTAGACCAGCAGT 57.152 45.455 1.87 0.00 0.00 4.40
4068 4198 1.444895 GCTTTGCATGTGCCTTCCG 60.445 57.895 2.07 0.00 41.18 4.30
4139 4273 6.929606 CCTAGCTAGTTACATGGGTGAATAAC 59.070 42.308 19.31 0.00 0.00 1.89
4181 4332 7.045612 GCATTTTACATAGACGACAATTGAACG 60.046 37.037 13.59 18.26 0.00 3.95
4193 4344 9.884465 GATTCCATTACTGCATTTTACATAGAC 57.116 33.333 0.00 0.00 0.00 2.59
4194 4345 9.625747 TGATTCCATTACTGCATTTTACATAGA 57.374 29.630 0.00 0.00 0.00 1.98
4195 4346 9.888878 CTGATTCCATTACTGCATTTTACATAG 57.111 33.333 0.00 0.00 0.00 2.23
4196 4347 9.407380 ACTGATTCCATTACTGCATTTTACATA 57.593 29.630 0.00 0.00 0.00 2.29
4197 4348 8.297470 ACTGATTCCATTACTGCATTTTACAT 57.703 30.769 0.00 0.00 0.00 2.29
4282 4437 5.386831 CGAACGAGATCATATTCAAAGCGAG 60.387 44.000 0.00 0.00 0.00 5.03
4311 4495 6.694411 ACGTGTAGTTTATATCTTTACCGCAG 59.306 38.462 0.00 0.00 0.00 5.18
4335 4519 5.015733 GTGTACGTACGTATGTGTGTAGAC 58.984 45.833 29.05 17.19 31.33 2.59
4336 4520 4.929211 AGTGTACGTACGTATGTGTGTAGA 59.071 41.667 29.05 3.84 32.82 2.59
4363 4564 1.737029 CGTTCGCTCATGGTCACATCT 60.737 52.381 0.00 0.00 34.35 2.90
4377 4578 4.216731 CCTTTCTTTTTCTTACCGTTCGC 58.783 43.478 0.00 0.00 0.00 4.70
4449 4654 1.078848 GCAGGGAGATCACGCAACT 60.079 57.895 9.73 0.00 0.00 3.16
4534 4739 0.904649 TGACACGAATCAGGAGCCAT 59.095 50.000 0.00 0.00 0.00 4.40
4557 4762 2.358615 CACTAAGCACGGCTGGCA 60.359 61.111 1.08 0.00 39.62 4.92
4560 4765 3.127533 GGCCACTAAGCACGGCTG 61.128 66.667 0.00 0.00 45.50 4.85
4581 4786 1.270971 GCACAAGCAATGCGGTTATG 58.729 50.000 0.00 0.00 41.58 1.90
4582 4787 3.719699 GCACAAGCAATGCGGTTAT 57.280 47.368 0.00 0.00 41.58 1.89
4588 4793 1.513586 GAGCTCGCACAAGCAATGC 60.514 57.895 0.00 0.00 45.00 3.56
4589 4794 1.225936 CGAGCTCGCACAAGCAATG 60.226 57.895 25.07 0.00 45.00 2.82
4630 4835 1.422161 AACACAAGCTCTCCCCTGCT 61.422 55.000 0.00 0.00 41.82 4.24
4631 4836 0.538287 AAACACAAGCTCTCCCCTGC 60.538 55.000 0.00 0.00 0.00 4.85
4632 4837 1.242076 CAAACACAAGCTCTCCCCTG 58.758 55.000 0.00 0.00 0.00 4.45
4633 4838 0.846693 ACAAACACAAGCTCTCCCCT 59.153 50.000 0.00 0.00 0.00 4.79
4634 4839 1.692411 AACAAACACAAGCTCTCCCC 58.308 50.000 0.00 0.00 0.00 4.81
4635 4840 3.801114 AAAACAAACACAAGCTCTCCC 57.199 42.857 0.00 0.00 0.00 4.30
4878 5097 2.035530 AGCAAAGCTAAGCTGCTAGG 57.964 50.000 11.61 0.00 43.24 3.02
4898 5117 0.883814 ACTGTCACTGAGCAGCAAGC 60.884 55.000 0.00 0.00 46.19 4.01
4899 5118 0.866427 CACTGTCACTGAGCAGCAAG 59.134 55.000 0.00 0.00 36.26 4.01
4900 5119 0.178767 ACACTGTCACTGAGCAGCAA 59.821 50.000 0.00 0.00 36.26 3.91
4901 5120 0.531311 CACACTGTCACTGAGCAGCA 60.531 55.000 0.00 0.00 36.26 4.41
4902 5121 1.839598 GCACACTGTCACTGAGCAGC 61.840 60.000 0.00 0.00 36.26 5.25
4903 5122 0.531311 TGCACACTGTCACTGAGCAG 60.531 55.000 1.53 0.00 38.58 4.24
4904 5123 0.811219 GTGCACACTGTCACTGAGCA 60.811 55.000 13.17 1.53 0.00 4.26
4905 5124 1.825285 CGTGCACACTGTCACTGAGC 61.825 60.000 18.64 0.00 0.00 4.26
4906 5125 1.825285 GCGTGCACACTGTCACTGAG 61.825 60.000 18.64 0.00 0.00 3.35
4907 5126 1.882625 GCGTGCACACTGTCACTGA 60.883 57.895 18.64 0.00 0.00 3.41
4908 5127 2.628106 GCGTGCACACTGTCACTG 59.372 61.111 18.64 0.00 0.00 3.66
4909 5128 2.961721 CGCGTGCACACTGTCACT 60.962 61.111 18.64 0.00 0.00 3.41
4910 5129 2.932083 CTCGCGTGCACACTGTCAC 61.932 63.158 18.64 0.00 0.00 3.67
4911 5130 2.065906 TACTCGCGTGCACACTGTCA 62.066 55.000 18.64 0.00 0.00 3.58
4912 5131 0.732880 ATACTCGCGTGCACACTGTC 60.733 55.000 18.64 0.00 0.00 3.51
4913 5132 0.319555 AATACTCGCGTGCACACTGT 60.320 50.000 18.64 11.09 0.00 3.55
4926 5145 7.728847 TGCATTCATGGTGTATACAATACTC 57.271 36.000 7.25 0.00 0.00 2.59
4939 5158 8.014070 TGAATATTCAAAGATGCATTCATGGT 57.986 30.769 15.82 0.00 33.55 3.55
5012 5232 6.016610 GGATTGTTAATTAGGGATGCGCTTAA 60.017 38.462 9.73 0.00 0.00 1.85
5161 5409 1.478105 GCATGAGGAATCATCTGGGCA 60.478 52.381 0.00 0.00 0.00 5.36
5163 5411 2.228059 GTGCATGAGGAATCATCTGGG 58.772 52.381 0.00 0.00 0.00 4.45
5164 5412 2.927028 TGTGCATGAGGAATCATCTGG 58.073 47.619 0.00 0.00 0.00 3.86
5274 5523 1.000717 GCAGCAGTAGTCCTAGCTAGC 60.001 57.143 15.74 6.62 35.19 3.42
5275 5524 2.293122 CAGCAGCAGTAGTCCTAGCTAG 59.707 54.545 14.20 14.20 35.19 3.42
5285 5534 1.326852 CATTTCGAGCAGCAGCAGTAG 59.673 52.381 3.17 0.00 45.49 2.57
5325 5574 4.282703 GGCTTTGCATCCATATGATTTCCT 59.717 41.667 3.65 0.00 34.84 3.36
5333 5582 4.142790 CTCTCTTGGCTTTGCATCCATAT 58.857 43.478 4.05 0.00 31.54 1.78
5345 5594 2.486191 CCAACAGTCAACTCTCTTGGCT 60.486 50.000 0.00 0.00 34.20 4.75
5388 5637 2.380410 GCCTGTCAGTAACACCGCG 61.380 63.158 0.00 0.00 33.24 6.46
5479 5734 1.741401 TCCGATTGGCAGTGCTTCG 60.741 57.895 16.11 19.16 34.14 3.79
5495 5757 4.285291 GCATTATTGTGCGCGTCC 57.715 55.556 8.43 0.00 35.10 4.79
5520 5799 3.775654 GCCGAGACCCAGACCCAG 61.776 72.222 0.00 0.00 0.00 4.45
5521 5800 4.316823 AGCCGAGACCCAGACCCA 62.317 66.667 0.00 0.00 0.00 4.51
5522 5801 3.775654 CAGCCGAGACCCAGACCC 61.776 72.222 0.00 0.00 0.00 4.46
5523 5802 0.755698 TATCAGCCGAGACCCAGACC 60.756 60.000 0.00 0.00 0.00 3.85
5524 5803 1.333177 ATATCAGCCGAGACCCAGAC 58.667 55.000 0.00 0.00 0.00 3.51
5525 5804 2.088104 AATATCAGCCGAGACCCAGA 57.912 50.000 0.00 0.00 0.00 3.86
5526 5805 4.543590 AATAATATCAGCCGAGACCCAG 57.456 45.455 0.00 0.00 0.00 4.45
5527 5806 4.102524 ACAAATAATATCAGCCGAGACCCA 59.897 41.667 0.00 0.00 0.00 4.51
5528 5807 4.642429 ACAAATAATATCAGCCGAGACCC 58.358 43.478 0.00 0.00 0.00 4.46
5529 5808 5.869888 CCTACAAATAATATCAGCCGAGACC 59.130 44.000 0.00 0.00 0.00 3.85
5530 5809 5.869888 CCCTACAAATAATATCAGCCGAGAC 59.130 44.000 0.00 0.00 0.00 3.36
5531 5810 5.542635 ACCCTACAAATAATATCAGCCGAGA 59.457 40.000 0.00 0.00 0.00 4.04
5532 5811 5.794894 ACCCTACAAATAATATCAGCCGAG 58.205 41.667 0.00 0.00 0.00 4.63
5533 5812 5.818678 ACCCTACAAATAATATCAGCCGA 57.181 39.130 0.00 0.00 0.00 5.54
5578 5857 1.869132 ACTATGTGCTACGCATGCATG 59.131 47.619 22.70 22.70 41.91 4.06
5580 5859 2.159170 TGTACTATGTGCTACGCATGCA 60.159 45.455 19.57 0.00 41.91 3.96
5581 5860 2.469826 TGTACTATGTGCTACGCATGC 58.530 47.619 7.91 7.91 41.91 4.06
5582 5861 5.219633 TGTATGTACTATGTGCTACGCATG 58.780 41.667 3.96 0.00 41.91 4.06
5583 5862 5.447624 TGTATGTACTATGTGCTACGCAT 57.552 39.130 0.00 0.00 41.91 4.73
5584 5863 4.904253 TGTATGTACTATGTGCTACGCA 57.096 40.909 0.00 0.00 35.60 5.24
5585 5864 9.170584 CATATATGTATGTACTATGTGCTACGC 57.829 37.037 4.43 0.00 34.31 4.42


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.