Multiple sequence alignment - TraesCS6B01G330400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G330400 chr6B 100.000 2711 0 0 1 2711 579551626 579548916 0.000000e+00 5007
1 TraesCS6B01G330400 chr6D 90.726 992 45 21 894 1848 388137562 388136581 0.000000e+00 1279
2 TraesCS6B01G330400 chr6D 82.530 664 75 18 2088 2711 388136582 388135920 1.840000e-151 545
3 TraesCS6B01G330400 chr6D 83.516 273 16 10 305 567 388138544 388138291 7.550000e-56 228
4 TraesCS6B01G330400 chr6D 93.069 101 2 2 105 202 388144481 388144383 2.810000e-30 143
5 TraesCS6B01G330400 chr6D 88.596 114 5 4 1 106 388146729 388146616 6.090000e-27 132
6 TraesCS6B01G330400 chr6A 89.776 939 40 22 874 1784 534747850 534746940 0.000000e+00 1151
7 TraesCS6B01G330400 chr6A 89.662 532 19 14 863 1359 533467455 533466925 0.000000e+00 645
8 TraesCS6B01G330400 chr6A 82.273 660 79 16 2090 2711 534746906 534746247 1.100000e-148 536
9 TraesCS6B01G330400 chr6A 91.045 402 23 4 1451 1848 533466891 533466499 5.140000e-147 531
10 TraesCS6B01G330400 chr6A 82.504 623 66 19 2129 2711 534712288 534711669 8.660000e-140 507
11 TraesCS6B01G330400 chr6A 87.611 339 22 6 245 567 534748687 534748353 2.550000e-100 375
12 TraesCS6B01G330400 chr6A 79.626 535 67 16 2219 2711 533464595 533464061 2.000000e-91 346
13 TraesCS6B01G330400 chr6A 88.950 181 10 5 644 817 534748262 534748085 5.880000e-52 215
14 TraesCS6B01G330400 chr6A 81.172 239 38 7 1850 2083 27796415 27796179 4.610000e-43 185
15 TraesCS6B01G330400 chr5A 81.590 239 38 6 1850 2084 522530794 522531030 2.750000e-45 193
16 TraesCS6B01G330400 chr7A 82.051 234 33 8 1849 2077 478160280 478160051 9.910000e-45 191
17 TraesCS6B01G330400 chr2D 84.343 198 28 3 1889 2084 448140701 448140505 9.910000e-45 191
18 TraesCS6B01G330400 chr2D 80.645 248 38 9 1843 2085 307808463 307808221 1.660000e-42 183
19 TraesCS6B01G330400 chr2D 81.092 238 28 12 1847 2076 83186836 83187064 9.980000e-40 174
20 TraesCS6B01G330400 chr2B 85.185 189 25 3 1905 2091 527886086 527885899 9.910000e-45 191
21 TraesCS6B01G330400 chr5D 81.116 233 40 4 1855 2084 32610764 32610995 1.660000e-42 183
22 TraesCS6B01G330400 chr2A 80.851 235 36 8 1847 2077 731982725 731982954 2.770000e-40 176


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G330400 chr6B 579548916 579551626 2710 True 5007.000000 5007 100.000000 1 2711 1 chr6B.!!$R1 2710
1 TraesCS6B01G330400 chr6D 388135920 388138544 2624 True 684.000000 1279 85.590667 305 2711 3 chr6D.!!$R1 2406
2 TraesCS6B01G330400 chr6A 534746247 534748687 2440 True 569.250000 1151 87.152500 245 2711 4 chr6A.!!$R4 2466
3 TraesCS6B01G330400 chr6A 533464061 533467455 3394 True 507.333333 645 86.777667 863 2711 3 chr6A.!!$R3 1848
4 TraesCS6B01G330400 chr6A 534711669 534712288 619 True 507.000000 507 82.504000 2129 2711 1 chr6A.!!$R2 582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
518 535 0.037605 CCGACCAATATAGACCGGCC 60.038 60.0 0.0 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2144 2703 0.039165 CTTTGCAACCGCTCCTTTCC 60.039 55.0 0.0 0.0 39.64 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.846325 TTTAACAAATTTGGCCGGTTTTAG 57.154 33.333 21.74 0.00 0.00 1.85
25 26 2.761559 ACAAATTTGGCCGGTTTTAGC 58.238 42.857 21.74 0.00 0.00 3.09
26 27 2.367241 ACAAATTTGGCCGGTTTTAGCT 59.633 40.909 21.74 0.00 0.00 3.32
27 28 3.181459 ACAAATTTGGCCGGTTTTAGCTT 60.181 39.130 21.74 0.00 0.00 3.74
28 29 2.741759 ATTTGGCCGGTTTTAGCTTG 57.258 45.000 1.90 0.00 0.00 4.01
29 30 1.404843 TTTGGCCGGTTTTAGCTTGT 58.595 45.000 1.90 0.00 0.00 3.16
30 31 0.671251 TTGGCCGGTTTTAGCTTGTG 59.329 50.000 1.90 0.00 0.00 3.33
31 32 1.080772 GGCCGGTTTTAGCTTGTGC 60.081 57.895 1.90 0.00 40.05 4.57
32 33 1.442017 GCCGGTTTTAGCTTGTGCG 60.442 57.895 1.90 0.00 45.42 5.34
33 34 1.946267 CCGGTTTTAGCTTGTGCGT 59.054 52.632 0.00 0.00 45.42 5.24
34 35 0.385473 CCGGTTTTAGCTTGTGCGTG 60.385 55.000 0.00 0.00 45.42 5.34
35 36 0.584396 CGGTTTTAGCTTGTGCGTGA 59.416 50.000 0.00 0.00 45.42 4.35
36 37 1.398451 CGGTTTTAGCTTGTGCGTGAG 60.398 52.381 0.00 0.00 45.42 3.51
37 38 1.069227 GGTTTTAGCTTGTGCGTGAGG 60.069 52.381 0.00 0.00 45.42 3.86
38 39 1.602377 GTTTTAGCTTGTGCGTGAGGT 59.398 47.619 0.00 0.00 45.42 3.85
39 40 1.961793 TTTAGCTTGTGCGTGAGGTT 58.038 45.000 0.00 0.00 45.42 3.50
40 41 1.508632 TTAGCTTGTGCGTGAGGTTC 58.491 50.000 0.00 0.00 45.42 3.62
41 42 0.679505 TAGCTTGTGCGTGAGGTTCT 59.320 50.000 0.00 0.00 45.42 3.01
42 43 0.601311 AGCTTGTGCGTGAGGTTCTC 60.601 55.000 0.00 0.00 45.42 2.87
43 44 1.569479 GCTTGTGCGTGAGGTTCTCC 61.569 60.000 0.00 0.00 0.00 3.71
52 53 3.764466 AGGTTCTCCTCGCGCCTG 61.764 66.667 0.00 0.00 40.58 4.85
53 54 4.821589 GGTTCTCCTCGCGCCTGG 62.822 72.222 0.00 4.07 0.00 4.45
54 55 4.821589 GTTCTCCTCGCGCCTGGG 62.822 72.222 0.00 7.44 0.00 4.45
69 70 2.347490 GGGTGACCGTGACATGCT 59.653 61.111 0.00 0.00 43.64 3.79
70 71 2.034879 GGGTGACCGTGACATGCTG 61.035 63.158 0.00 0.00 43.64 4.41
71 72 2.680913 GGTGACCGTGACATGCTGC 61.681 63.158 0.00 0.00 0.00 5.25
72 73 2.738139 TGACCGTGACATGCTGCG 60.738 61.111 0.00 0.00 0.00 5.18
73 74 2.432456 GACCGTGACATGCTGCGA 60.432 61.111 0.00 0.00 0.00 5.10
74 75 2.730672 GACCGTGACATGCTGCGAC 61.731 63.158 0.00 0.00 0.00 5.19
75 76 3.490759 CCGTGACATGCTGCGACC 61.491 66.667 0.00 0.00 0.00 4.79
76 77 3.842126 CGTGACATGCTGCGACCG 61.842 66.667 0.00 0.00 0.00 4.79
77 78 3.490759 GTGACATGCTGCGACCGG 61.491 66.667 0.00 0.00 0.00 5.28
88 89 4.351938 CGACCGGCCGTGAGTTCA 62.352 66.667 26.12 0.00 0.00 3.18
89 90 2.264794 GACCGGCCGTGAGTTCAT 59.735 61.111 26.12 0.00 0.00 2.57
90 91 1.375523 GACCGGCCGTGAGTTCATT 60.376 57.895 26.12 0.00 0.00 2.57
91 92 0.953960 GACCGGCCGTGAGTTCATTT 60.954 55.000 26.12 0.00 0.00 2.32
92 93 0.953960 ACCGGCCGTGAGTTCATTTC 60.954 55.000 26.12 0.00 0.00 2.17
93 94 0.953471 CCGGCCGTGAGTTCATTTCA 60.953 55.000 26.12 0.00 0.00 2.69
94 95 0.443869 CGGCCGTGAGTTCATTTCAG 59.556 55.000 19.50 0.00 0.00 3.02
95 96 0.804989 GGCCGTGAGTTCATTTCAGG 59.195 55.000 0.00 0.00 0.00 3.86
96 97 1.610624 GGCCGTGAGTTCATTTCAGGA 60.611 52.381 0.00 0.00 33.48 3.86
97 98 1.734465 GCCGTGAGTTCATTTCAGGAG 59.266 52.381 0.00 0.00 33.48 3.69
98 99 1.734465 CCGTGAGTTCATTTCAGGAGC 59.266 52.381 0.00 0.00 33.48 4.70
99 100 2.416747 CGTGAGTTCATTTCAGGAGCA 58.583 47.619 0.00 0.00 33.48 4.26
100 101 2.414481 CGTGAGTTCATTTCAGGAGCAG 59.586 50.000 0.00 0.00 33.48 4.24
101 102 3.406764 GTGAGTTCATTTCAGGAGCAGT 58.593 45.455 0.00 0.00 0.00 4.40
102 103 4.569943 GTGAGTTCATTTCAGGAGCAGTA 58.430 43.478 0.00 0.00 0.00 2.74
103 104 4.629200 GTGAGTTCATTTCAGGAGCAGTAG 59.371 45.833 0.00 0.00 0.00 2.57
104 105 4.284490 TGAGTTCATTTCAGGAGCAGTAGT 59.716 41.667 0.00 0.00 0.00 2.73
105 106 5.480422 TGAGTTCATTTCAGGAGCAGTAGTA 59.520 40.000 0.00 0.00 0.00 1.82
106 107 6.014584 TGAGTTCATTTCAGGAGCAGTAGTAA 60.015 38.462 0.00 0.00 0.00 2.24
107 108 6.951971 AGTTCATTTCAGGAGCAGTAGTAAT 58.048 36.000 0.00 0.00 0.00 1.89
108 109 7.398024 AGTTCATTTCAGGAGCAGTAGTAATT 58.602 34.615 0.00 0.00 0.00 1.40
109 110 8.540388 AGTTCATTTCAGGAGCAGTAGTAATTA 58.460 33.333 0.00 0.00 0.00 1.40
110 111 9.162764 GTTCATTTCAGGAGCAGTAGTAATTAA 57.837 33.333 0.00 0.00 0.00 1.40
111 112 9.905713 TTCATTTCAGGAGCAGTAGTAATTAAT 57.094 29.630 0.00 0.00 0.00 1.40
112 113 9.905713 TCATTTCAGGAGCAGTAGTAATTAATT 57.094 29.630 5.89 5.89 0.00 1.40
117 118 9.817809 TCAGGAGCAGTAGTAATTAATTAACTG 57.182 33.333 23.85 23.85 35.62 3.16
118 119 8.552034 CAGGAGCAGTAGTAATTAATTAACTGC 58.448 37.037 33.59 33.59 46.88 4.40
123 124 9.241317 GCAGTAGTAATTAATTAACTGCGTAGA 57.759 33.333 30.58 8.99 42.40 2.59
134 135 4.663636 AACTGCGTAGATAAAAGTGTGC 57.336 40.909 7.78 0.00 0.00 4.57
135 136 3.659786 ACTGCGTAGATAAAAGTGTGCA 58.340 40.909 7.78 0.00 0.00 4.57
136 137 4.062293 ACTGCGTAGATAAAAGTGTGCAA 58.938 39.130 7.78 0.00 0.00 4.08
137 138 4.152402 ACTGCGTAGATAAAAGTGTGCAAG 59.848 41.667 7.78 0.00 0.00 4.01
138 139 3.120338 TGCGTAGATAAAAGTGTGCAAGC 60.120 43.478 0.00 0.00 0.00 4.01
139 140 3.125316 GCGTAGATAAAAGTGTGCAAGCT 59.875 43.478 0.00 0.00 0.00 3.74
140 141 4.328983 GCGTAGATAAAAGTGTGCAAGCTA 59.671 41.667 0.00 0.00 0.00 3.32
141 142 5.500931 GCGTAGATAAAAGTGTGCAAGCTAG 60.501 44.000 0.00 0.00 0.00 3.42
142 143 5.577164 CGTAGATAAAAGTGTGCAAGCTAGT 59.423 40.000 0.00 0.00 0.00 2.57
143 144 5.869753 AGATAAAAGTGTGCAAGCTAGTG 57.130 39.130 0.00 0.00 0.00 2.74
144 145 2.781945 AAAAGTGTGCAAGCTAGTGC 57.218 45.000 3.32 3.32 45.15 4.40
145 146 0.954452 AAAGTGTGCAAGCTAGTGCC 59.046 50.000 7.90 0.72 44.26 5.01
146 147 1.230635 AAGTGTGCAAGCTAGTGCCG 61.231 55.000 7.90 0.00 44.26 5.69
147 148 1.961277 GTGTGCAAGCTAGTGCCGT 60.961 57.895 7.90 0.00 44.26 5.68
148 149 1.227823 TGTGCAAGCTAGTGCCGTT 60.228 52.632 7.90 0.00 44.26 4.44
149 150 0.817634 TGTGCAAGCTAGTGCCGTTT 60.818 50.000 7.90 0.00 44.26 3.60
150 151 0.110192 GTGCAAGCTAGTGCCGTTTC 60.110 55.000 7.90 0.00 44.26 2.78
151 152 1.132640 GCAAGCTAGTGCCGTTTCG 59.867 57.895 0.00 0.00 38.66 3.46
152 153 1.289109 GCAAGCTAGTGCCGTTTCGA 61.289 55.000 0.00 0.00 38.66 3.71
153 154 0.438830 CAAGCTAGTGCCGTTTCGAC 59.561 55.000 0.00 0.00 40.80 4.20
154 155 0.669625 AAGCTAGTGCCGTTTCGACC 60.670 55.000 0.00 0.00 40.80 4.79
155 156 2.442188 GCTAGTGCCGTTTCGACCG 61.442 63.158 0.00 0.00 0.00 4.79
156 157 1.080974 CTAGTGCCGTTTCGACCGT 60.081 57.895 3.33 0.00 0.00 4.83
157 158 1.342082 CTAGTGCCGTTTCGACCGTG 61.342 60.000 3.33 0.00 0.00 4.94
158 159 4.364409 GTGCCGTTTCGACCGTGC 62.364 66.667 3.33 6.57 0.00 5.34
161 162 3.759828 CCGTTTCGACCGTGCGAC 61.760 66.667 3.33 0.00 40.42 5.19
162 163 4.099585 CGTTTCGACCGTGCGACG 62.100 66.667 0.00 0.00 40.42 5.12
163 164 2.726912 GTTTCGACCGTGCGACGA 60.727 61.111 0.00 8.88 46.05 4.20
164 165 2.726912 TTTCGACCGTGCGACGAC 60.727 61.111 0.00 0.00 46.05 4.34
165 166 4.688419 TTCGACCGTGCGACGACC 62.688 66.667 0.00 1.75 46.05 4.79
170 171 4.695231 CCGTGCGACGACCGTCTT 62.695 66.667 18.60 0.00 46.05 3.01
171 172 3.164011 CGTGCGACGACCGTCTTC 61.164 66.667 18.60 11.43 46.05 2.87
172 173 2.254651 GTGCGACGACCGTCTTCT 59.745 61.111 18.60 0.00 42.54 2.85
173 174 1.796749 GTGCGACGACCGTCTTCTC 60.797 63.158 18.60 8.75 42.54 2.87
174 175 2.202453 GCGACGACCGTCTTCTCC 60.202 66.667 18.60 1.05 42.54 3.71
175 176 2.688794 GCGACGACCGTCTTCTCCT 61.689 63.158 18.60 0.00 42.54 3.69
176 177 1.134901 CGACGACCGTCTTCTCCTG 59.865 63.158 18.60 0.00 42.54 3.86
177 178 1.296755 CGACGACCGTCTTCTCCTGA 61.297 60.000 18.60 0.00 42.54 3.86
178 179 0.168568 GACGACCGTCTTCTCCTGAC 59.831 60.000 14.52 0.00 41.57 3.51
179 180 0.250814 ACGACCGTCTTCTCCTGACT 60.251 55.000 0.00 0.00 32.70 3.41
180 181 0.448593 CGACCGTCTTCTCCTGACTC 59.551 60.000 0.00 0.00 32.70 3.36
181 182 1.828979 GACCGTCTTCTCCTGACTCT 58.171 55.000 0.00 0.00 32.70 3.24
182 183 1.741145 GACCGTCTTCTCCTGACTCTC 59.259 57.143 0.00 0.00 32.70 3.20
183 184 1.099689 CCGTCTTCTCCTGACTCTCC 58.900 60.000 0.00 0.00 32.70 3.71
184 185 1.614583 CCGTCTTCTCCTGACTCTCCA 60.615 57.143 0.00 0.00 32.70 3.86
185 186 1.742831 CGTCTTCTCCTGACTCTCCAG 59.257 57.143 0.00 0.00 32.70 3.86
186 187 2.802719 GTCTTCTCCTGACTCTCCAGT 58.197 52.381 0.00 0.00 34.57 4.00
187 188 2.491693 GTCTTCTCCTGACTCTCCAGTG 59.508 54.545 0.00 0.00 30.63 3.66
188 189 2.376855 TCTTCTCCTGACTCTCCAGTGA 59.623 50.000 0.00 0.00 30.63 3.41
189 190 2.980246 TCTCCTGACTCTCCAGTGAA 57.020 50.000 0.00 0.00 30.63 3.18
190 191 3.464720 TCTCCTGACTCTCCAGTGAAT 57.535 47.619 0.00 0.00 30.63 2.57
191 192 3.784178 TCTCCTGACTCTCCAGTGAATT 58.216 45.455 0.00 0.00 30.63 2.17
192 193 3.766591 TCTCCTGACTCTCCAGTGAATTC 59.233 47.826 0.00 0.00 30.63 2.17
193 194 3.510459 TCCTGACTCTCCAGTGAATTCA 58.490 45.455 3.38 3.38 30.63 2.57
194 195 3.903714 TCCTGACTCTCCAGTGAATTCAA 59.096 43.478 10.35 0.00 30.63 2.69
195 196 3.999663 CCTGACTCTCCAGTGAATTCAAC 59.000 47.826 10.35 4.88 30.63 3.18
196 197 4.262808 CCTGACTCTCCAGTGAATTCAACT 60.263 45.833 10.35 7.19 30.63 3.16
197 198 4.635223 TGACTCTCCAGTGAATTCAACTG 58.365 43.478 21.47 21.47 30.63 3.16
198 199 4.101585 TGACTCTCCAGTGAATTCAACTGT 59.898 41.667 24.08 13.26 30.63 3.55
199 200 5.041191 ACTCTCCAGTGAATTCAACTGTT 57.959 39.130 24.08 0.00 0.00 3.16
200 201 6.174720 ACTCTCCAGTGAATTCAACTGTTA 57.825 37.500 24.08 16.20 0.00 2.41
201 202 6.226787 ACTCTCCAGTGAATTCAACTGTTAG 58.773 40.000 24.08 21.21 0.00 2.34
202 203 6.174720 TCTCCAGTGAATTCAACTGTTAGT 57.825 37.500 24.08 0.87 0.00 2.24
203 204 6.591935 TCTCCAGTGAATTCAACTGTTAGTT 58.408 36.000 24.08 0.00 39.39 2.24
204 205 7.054124 TCTCCAGTGAATTCAACTGTTAGTTT 58.946 34.615 24.08 0.00 36.03 2.66
205 206 7.556275 TCTCCAGTGAATTCAACTGTTAGTTTT 59.444 33.333 24.08 0.00 36.03 2.43
206 207 8.062065 TCCAGTGAATTCAACTGTTAGTTTTT 57.938 30.769 24.08 0.00 36.03 1.94
234 235 3.828875 TTTTGCCGGGAAAATTCAACT 57.171 38.095 27.64 0.00 0.00 3.16
235 236 2.810439 TTGCCGGGAAAATTCAACTG 57.190 45.000 5.67 0.00 0.00 3.16
236 237 1.698506 TGCCGGGAAAATTCAACTGT 58.301 45.000 2.18 0.00 0.00 3.55
237 238 2.035632 TGCCGGGAAAATTCAACTGTT 58.964 42.857 2.18 0.00 0.00 3.16
238 239 3.223435 TGCCGGGAAAATTCAACTGTTA 58.777 40.909 2.18 0.00 0.00 2.41
239 240 3.254657 TGCCGGGAAAATTCAACTGTTAG 59.745 43.478 2.18 0.00 0.00 2.34
240 241 3.833442 CCGGGAAAATTCAACTGTTAGC 58.167 45.455 0.00 0.00 0.00 3.09
241 242 3.506067 CCGGGAAAATTCAACTGTTAGCT 59.494 43.478 0.00 0.00 0.00 3.32
242 243 4.698304 CCGGGAAAATTCAACTGTTAGCTA 59.302 41.667 0.00 0.00 0.00 3.32
243 244 5.163754 CCGGGAAAATTCAACTGTTAGCTAG 60.164 44.000 0.00 0.00 0.00 3.42
249 250 7.907214 AAATTCAACTGTTAGCTAGTACCTG 57.093 36.000 0.00 0.00 0.00 4.00
256 257 3.696051 TGTTAGCTAGTACCTGTAACCGG 59.304 47.826 0.00 0.00 0.00 5.28
277 279 4.571176 CGGAGGAAAAAGTGTTATCTAGCC 59.429 45.833 0.00 0.00 0.00 3.93
308 311 5.354767 TCTGTGAGACATGCATGTTAGATC 58.645 41.667 31.82 24.62 41.95 2.75
353 356 3.407424 TCCACAGAGAACAGTCCAATG 57.593 47.619 0.00 0.00 0.00 2.82
358 361 4.212847 CACAGAGAACAGTCCAATGAACAG 59.787 45.833 0.00 0.00 0.00 3.16
365 368 2.227388 CAGTCCAATGAACAGCTGAACC 59.773 50.000 23.35 9.19 0.00 3.62
366 369 2.158623 AGTCCAATGAACAGCTGAACCA 60.159 45.455 23.35 14.73 0.00 3.67
409 412 3.317430 GCATGCAGAGAGGGAAATTAAGG 59.683 47.826 14.21 0.00 0.00 2.69
507 524 0.462047 GGCAGAATCGTCCGACCAAT 60.462 55.000 0.00 0.00 0.00 3.16
516 533 1.068748 CGTCCGACCAATATAGACCGG 60.069 57.143 0.00 0.00 38.41 5.28
517 534 0.963962 TCCGACCAATATAGACCGGC 59.036 55.000 0.00 0.00 37.13 6.13
518 535 0.037605 CCGACCAATATAGACCGGCC 60.038 60.000 0.00 0.00 0.00 6.13
519 536 0.388134 CGACCAATATAGACCGGCCG 60.388 60.000 21.04 21.04 0.00 6.13
555 572 4.474846 CCCATTTCGCAACGCCCG 62.475 66.667 0.00 0.00 0.00 6.13
585 628 1.847328 TCTGAATCAGCTCGGTACCA 58.153 50.000 13.54 0.00 0.00 3.25
597 645 0.810031 CGGTACCATCGGAGGCAAAG 60.810 60.000 13.54 0.00 0.00 2.77
654 730 5.888691 TTTTTGCGAGCCTATTTGTATCA 57.111 34.783 0.00 0.00 0.00 2.15
655 731 4.875544 TTTGCGAGCCTATTTGTATCAC 57.124 40.909 0.00 0.00 0.00 3.06
809 894 0.178068 ACAACCACGACTCTGCAAGT 59.822 50.000 0.00 1.82 42.42 3.16
823 908 6.467677 ACTCTGCAAGTCTGAGCTAAAATAA 58.532 36.000 0.10 0.00 42.48 1.40
840 925 9.520204 GCTAAAATAAAGCTAATCAATTCAGCA 57.480 29.630 0.00 0.00 37.78 4.41
842 927 7.998753 AAATAAAGCTAATCAATTCAGCAGC 57.001 32.000 0.00 0.00 37.78 5.25
843 928 4.382345 AAAGCTAATCAATTCAGCAGCC 57.618 40.909 0.00 0.00 37.78 4.85
844 929 2.305009 AGCTAATCAATTCAGCAGCCC 58.695 47.619 0.00 0.00 37.78 5.19
845 930 2.091994 AGCTAATCAATTCAGCAGCCCT 60.092 45.455 0.00 0.00 37.78 5.19
846 931 2.292845 GCTAATCAATTCAGCAGCCCTC 59.707 50.000 0.00 0.00 35.35 4.30
847 932 1.386533 AATCAATTCAGCAGCCCTCG 58.613 50.000 0.00 0.00 0.00 4.63
848 933 1.099879 ATCAATTCAGCAGCCCTCGC 61.100 55.000 0.00 0.00 0.00 5.03
849 934 2.042259 CAATTCAGCAGCCCTCGCA 61.042 57.895 0.00 0.00 37.52 5.10
850 935 1.303561 AATTCAGCAGCCCTCGCAA 60.304 52.632 0.00 0.00 37.52 4.85
851 936 0.895100 AATTCAGCAGCCCTCGCAAA 60.895 50.000 0.00 0.00 37.52 3.68
852 937 0.895100 ATTCAGCAGCCCTCGCAAAA 60.895 50.000 0.00 0.00 37.52 2.44
853 938 1.106351 TTCAGCAGCCCTCGCAAAAA 61.106 50.000 0.00 0.00 37.52 1.94
961 1453 0.038744 CAGGTCAATTCCTGCCTGGT 59.961 55.000 0.52 0.00 46.53 4.00
986 1480 4.454161 TGCTATAAATGCACACGTCAAACT 59.546 37.500 0.00 0.00 35.31 2.66
989 1483 2.755836 AATGCACACGTCAAACTGAC 57.244 45.000 0.00 0.00 43.65 3.51
1034 1529 4.221422 CCGCTAGCCCGCTTGCTA 62.221 66.667 18.46 4.30 42.75 3.49
1555 2106 3.866651 CCTGACTTGTCCTTCGAATGAT 58.133 45.455 6.41 0.00 0.00 2.45
1562 2113 8.038351 TGACTTGTCCTTCGAATGATAATACAA 58.962 33.333 11.78 8.21 0.00 2.41
1575 2126 2.094762 AATACAACAGTCCTGGTCGC 57.905 50.000 0.00 0.00 34.19 5.19
1613 2164 4.741928 AGGGTGACTTGGTAATTTCCTT 57.258 40.909 2.53 0.00 0.00 3.36
1692 2245 8.286800 GTCATTTGTACAGCACACAAGTTTATA 58.713 33.333 0.00 0.00 37.22 0.98
1693 2246 8.503196 TCATTTGTACAGCACACAAGTTTATAG 58.497 33.333 0.00 0.00 37.22 1.31
1694 2247 7.795482 TTTGTACAGCACACAAGTTTATAGT 57.205 32.000 0.00 0.00 37.22 2.12
1746 2302 5.991328 TCATCAGAAGAAATACATTCCGC 57.009 39.130 0.00 0.00 38.94 5.54
1816 2373 8.690203 TCAAACCAAGAAAAGAGAATACATCA 57.310 30.769 0.00 0.00 0.00 3.07
1827 2384 9.872684 AAAAGAGAATACATCATGGTATCCAAT 57.127 29.630 0.00 0.00 36.95 3.16
1840 2397 4.044065 TGGTATCCAATGTCTTTCAACCCT 59.956 41.667 0.00 0.00 0.00 4.34
1848 2405 7.182026 TCCAATGTCTTTCAACCCTATCTTCTA 59.818 37.037 0.00 0.00 0.00 2.10
1849 2406 7.497249 CCAATGTCTTTCAACCCTATCTTCTAG 59.503 40.741 0.00 0.00 0.00 2.43
1850 2407 6.546428 TGTCTTTCAACCCTATCTTCTAGG 57.454 41.667 0.00 0.00 34.52 3.02
1851 2408 5.104900 TGTCTTTCAACCCTATCTTCTAGGC 60.105 44.000 0.00 0.00 33.41 3.93
1852 2409 4.409247 TCTTTCAACCCTATCTTCTAGGCC 59.591 45.833 0.00 0.00 33.41 5.19
1853 2410 2.690840 TCAACCCTATCTTCTAGGCCC 58.309 52.381 0.00 0.00 33.41 5.80
1854 2411 2.250273 TCAACCCTATCTTCTAGGCCCT 59.750 50.000 0.00 0.00 33.41 5.19
1855 2412 2.370189 CAACCCTATCTTCTAGGCCCTG 59.630 54.545 0.00 0.00 33.41 4.45
1856 2413 1.581149 ACCCTATCTTCTAGGCCCTGT 59.419 52.381 0.00 0.00 33.41 4.00
1857 2414 2.021936 ACCCTATCTTCTAGGCCCTGTT 60.022 50.000 0.00 0.00 33.41 3.16
1858 2415 3.049344 CCCTATCTTCTAGGCCCTGTTT 58.951 50.000 0.00 0.00 33.41 2.83
1859 2416 3.181450 CCCTATCTTCTAGGCCCTGTTTG 60.181 52.174 0.00 0.00 33.41 2.93
1860 2417 3.456277 CCTATCTTCTAGGCCCTGTTTGT 59.544 47.826 0.00 0.00 0.00 2.83
1861 2418 4.080299 CCTATCTTCTAGGCCCTGTTTGTT 60.080 45.833 0.00 0.00 0.00 2.83
1862 2419 3.876309 TCTTCTAGGCCCTGTTTGTTT 57.124 42.857 0.00 0.00 0.00 2.83
1863 2420 3.486383 TCTTCTAGGCCCTGTTTGTTTG 58.514 45.455 0.00 0.00 0.00 2.93
1864 2421 2.286365 TCTAGGCCCTGTTTGTTTGG 57.714 50.000 0.00 0.00 0.00 3.28
1865 2422 0.603065 CTAGGCCCTGTTTGTTTGGC 59.397 55.000 0.00 0.00 43.26 4.52
1867 2424 3.549730 GCCCTGTTTGTTTGGCCT 58.450 55.556 3.32 0.00 37.94 5.19
1868 2425 1.829456 GCCCTGTTTGTTTGGCCTT 59.171 52.632 3.32 0.00 37.94 4.35
1869 2426 0.180171 GCCCTGTTTGTTTGGCCTTT 59.820 50.000 3.32 0.00 37.94 3.11
1870 2427 1.408127 GCCCTGTTTGTTTGGCCTTTT 60.408 47.619 3.32 0.00 37.94 2.27
1871 2428 2.158885 GCCCTGTTTGTTTGGCCTTTTA 60.159 45.455 3.32 0.00 37.94 1.52
1872 2429 3.462982 CCCTGTTTGTTTGGCCTTTTAC 58.537 45.455 3.32 0.00 0.00 2.01
1873 2430 3.133901 CCCTGTTTGTTTGGCCTTTTACT 59.866 43.478 3.32 0.00 0.00 2.24
1874 2431 4.383661 CCCTGTTTGTTTGGCCTTTTACTT 60.384 41.667 3.32 0.00 0.00 2.24
1875 2432 5.182487 CCTGTTTGTTTGGCCTTTTACTTT 58.818 37.500 3.32 0.00 0.00 2.66
1876 2433 5.645929 CCTGTTTGTTTGGCCTTTTACTTTT 59.354 36.000 3.32 0.00 0.00 2.27
1877 2434 6.819146 CCTGTTTGTTTGGCCTTTTACTTTTA 59.181 34.615 3.32 0.00 0.00 1.52
1878 2435 7.201574 CCTGTTTGTTTGGCCTTTTACTTTTAC 60.202 37.037 3.32 0.00 0.00 2.01
1879 2436 7.387643 TGTTTGTTTGGCCTTTTACTTTTACT 58.612 30.769 3.32 0.00 0.00 2.24
1880 2437 7.878644 TGTTTGTTTGGCCTTTTACTTTTACTT 59.121 29.630 3.32 0.00 0.00 2.24
1881 2438 8.723311 GTTTGTTTGGCCTTTTACTTTTACTTT 58.277 29.630 3.32 0.00 0.00 2.66
1882 2439 8.850007 TTGTTTGGCCTTTTACTTTTACTTTT 57.150 26.923 3.32 0.00 0.00 2.27
1883 2440 9.939802 TTGTTTGGCCTTTTACTTTTACTTTTA 57.060 25.926 3.32 0.00 0.00 1.52
1884 2441 9.368674 TGTTTGGCCTTTTACTTTTACTTTTAC 57.631 29.630 3.32 0.00 0.00 2.01
1885 2442 8.533965 GTTTGGCCTTTTACTTTTACTTTTACG 58.466 33.333 3.32 0.00 0.00 3.18
1886 2443 6.737118 TGGCCTTTTACTTTTACTTTTACGG 58.263 36.000 3.32 0.00 0.00 4.02
1887 2444 5.630680 GGCCTTTTACTTTTACTTTTACGGC 59.369 40.000 0.00 0.00 0.00 5.68
1888 2445 6.441274 GCCTTTTACTTTTACTTTTACGGCT 58.559 36.000 0.00 0.00 0.00 5.52
1889 2446 6.919662 GCCTTTTACTTTTACTTTTACGGCTT 59.080 34.615 0.00 0.00 0.00 4.35
1890 2447 7.436080 GCCTTTTACTTTTACTTTTACGGCTTT 59.564 33.333 0.00 0.00 0.00 3.51
1891 2448 9.304731 CCTTTTACTTTTACTTTTACGGCTTTT 57.695 29.630 0.00 0.00 0.00 2.27
1893 2450 8.854979 TTTACTTTTACTTTTACGGCTTTTCC 57.145 30.769 0.00 0.00 0.00 3.13
1894 2451 6.453926 ACTTTTACTTTTACGGCTTTTCCA 57.546 33.333 0.00 0.00 34.01 3.53
1895 2452 7.046292 ACTTTTACTTTTACGGCTTTTCCAT 57.954 32.000 0.00 0.00 34.01 3.41
1896 2453 7.494211 ACTTTTACTTTTACGGCTTTTCCATT 58.506 30.769 0.00 0.00 34.01 3.16
1897 2454 7.982919 ACTTTTACTTTTACGGCTTTTCCATTT 59.017 29.630 0.00 0.00 34.01 2.32
1898 2455 8.719560 TTTTACTTTTACGGCTTTTCCATTTT 57.280 26.923 0.00 0.00 34.01 1.82
1899 2456 7.701809 TTACTTTTACGGCTTTTCCATTTTG 57.298 32.000 0.00 0.00 34.01 2.44
1900 2457 5.908341 ACTTTTACGGCTTTTCCATTTTGA 58.092 33.333 0.00 0.00 34.01 2.69
1901 2458 6.521162 ACTTTTACGGCTTTTCCATTTTGAT 58.479 32.000 0.00 0.00 34.01 2.57
1902 2459 7.662897 ACTTTTACGGCTTTTCCATTTTGATA 58.337 30.769 0.00 0.00 34.01 2.15
1903 2460 8.145122 ACTTTTACGGCTTTTCCATTTTGATAA 58.855 29.630 0.00 0.00 34.01 1.75
1904 2461 8.888579 TTTTACGGCTTTTCCATTTTGATAAA 57.111 26.923 0.00 0.00 34.01 1.40
1905 2462 8.888579 TTTACGGCTTTTCCATTTTGATAAAA 57.111 26.923 0.00 0.00 34.01 1.52
1906 2463 8.888579 TTACGGCTTTTCCATTTTGATAAAAA 57.111 26.923 0.00 0.00 33.47 1.94
1923 2480 1.839424 AAAAAGCCGCATAAGCTCCT 58.161 45.000 0.00 0.00 40.49 3.69
1924 2481 2.710096 AAAAGCCGCATAAGCTCCTA 57.290 45.000 0.00 0.00 40.49 2.94
1925 2482 2.710096 AAAGCCGCATAAGCTCCTAA 57.290 45.000 0.00 0.00 40.49 2.69
1926 2483 2.710096 AAGCCGCATAAGCTCCTAAA 57.290 45.000 0.00 0.00 40.49 1.85
1927 2484 2.938956 AGCCGCATAAGCTCCTAAAT 57.061 45.000 0.00 0.00 34.91 1.40
1928 2485 4.351874 AAGCCGCATAAGCTCCTAAATA 57.648 40.909 0.00 0.00 40.49 1.40
1929 2486 3.931578 AGCCGCATAAGCTCCTAAATAG 58.068 45.455 0.00 0.00 34.91 1.73
1930 2487 3.003480 GCCGCATAAGCTCCTAAATAGG 58.997 50.000 0.00 0.00 38.72 2.57
1931 2488 3.600388 CCGCATAAGCTCCTAAATAGGG 58.400 50.000 6.64 0.00 38.02 3.53
1932 2489 3.008049 CCGCATAAGCTCCTAAATAGGGT 59.992 47.826 6.64 0.00 38.02 4.34
1933 2490 4.505039 CCGCATAAGCTCCTAAATAGGGTT 60.505 45.833 6.64 1.83 38.02 4.11
1934 2491 5.063880 CGCATAAGCTCCTAAATAGGGTTT 58.936 41.667 6.64 4.93 38.02 3.27
1935 2492 5.531287 CGCATAAGCTCCTAAATAGGGTTTT 59.469 40.000 6.64 2.19 38.02 2.43
1936 2493 6.708949 CGCATAAGCTCCTAAATAGGGTTTTA 59.291 38.462 6.64 4.05 38.02 1.52
1937 2494 7.390718 CGCATAAGCTCCTAAATAGGGTTTTAT 59.609 37.037 6.64 5.83 38.02 1.40
1938 2495 8.515414 GCATAAGCTCCTAAATAGGGTTTTATG 58.485 37.037 19.69 19.69 43.79 1.90
1939 2496 9.574516 CATAAGCTCCTAAATAGGGTTTTATGT 57.425 33.333 17.88 1.54 43.79 2.29
1941 2498 8.895141 AAGCTCCTAAATAGGGTTTTATGTTT 57.105 30.769 6.64 0.00 43.79 2.83
1942 2499 8.521170 AGCTCCTAAATAGGGTTTTATGTTTC 57.479 34.615 6.64 0.00 43.79 2.78
1943 2500 7.282450 AGCTCCTAAATAGGGTTTTATGTTTCG 59.718 37.037 6.64 0.00 43.79 3.46
1944 2501 7.468220 GCTCCTAAATAGGGTTTTATGTTTCGG 60.468 40.741 6.64 0.00 43.79 4.30
1945 2502 6.319405 TCCTAAATAGGGTTTTATGTTTCGGC 59.681 38.462 6.64 0.00 43.79 5.54
1946 2503 6.320418 CCTAAATAGGGTTTTATGTTTCGGCT 59.680 38.462 0.00 0.00 39.86 5.52
1947 2504 7.499895 CCTAAATAGGGTTTTATGTTTCGGCTA 59.500 37.037 0.00 0.00 39.86 3.93
1948 2505 7.891498 AAATAGGGTTTTATGTTTCGGCTAT 57.109 32.000 0.00 0.00 0.00 2.97
1949 2506 7.891498 AATAGGGTTTTATGTTTCGGCTATT 57.109 32.000 0.00 0.00 0.00 1.73
1950 2507 5.576447 AGGGTTTTATGTTTCGGCTATTG 57.424 39.130 0.00 0.00 0.00 1.90
1951 2508 4.401202 AGGGTTTTATGTTTCGGCTATTGG 59.599 41.667 0.00 0.00 0.00 3.16
1952 2509 4.109766 GGTTTTATGTTTCGGCTATTGGC 58.890 43.478 0.00 0.00 40.90 4.52
1953 2510 4.142249 GGTTTTATGTTTCGGCTATTGGCT 60.142 41.667 0.00 0.00 41.46 4.75
1954 2511 5.407502 GTTTTATGTTTCGGCTATTGGCTT 58.592 37.500 0.00 0.00 41.46 4.35
1955 2512 6.404954 GGTTTTATGTTTCGGCTATTGGCTTA 60.405 38.462 0.00 0.00 41.46 3.09
1956 2513 6.952773 TTTATGTTTCGGCTATTGGCTTAT 57.047 33.333 0.00 0.00 41.46 1.73
1957 2514 4.836125 ATGTTTCGGCTATTGGCTTATG 57.164 40.909 0.00 0.00 41.46 1.90
1958 2515 3.879998 TGTTTCGGCTATTGGCTTATGA 58.120 40.909 0.00 0.00 41.46 2.15
1959 2516 4.265893 TGTTTCGGCTATTGGCTTATGAA 58.734 39.130 0.00 0.00 41.46 2.57
1960 2517 4.887071 TGTTTCGGCTATTGGCTTATGAAT 59.113 37.500 0.00 0.00 41.46 2.57
1961 2518 6.058833 TGTTTCGGCTATTGGCTTATGAATA 58.941 36.000 0.00 0.00 41.46 1.75
1962 2519 6.544197 TGTTTCGGCTATTGGCTTATGAATAA 59.456 34.615 0.00 0.00 41.46 1.40
1963 2520 7.230510 TGTTTCGGCTATTGGCTTATGAATAAT 59.769 33.333 0.00 0.00 41.46 1.28
1964 2521 8.726988 GTTTCGGCTATTGGCTTATGAATAATA 58.273 33.333 0.00 0.00 41.46 0.98
1965 2522 9.461312 TTTCGGCTATTGGCTTATGAATAATAT 57.539 29.630 0.00 0.00 41.46 1.28
1966 2523 9.461312 TTCGGCTATTGGCTTATGAATAATATT 57.539 29.630 0.00 0.00 41.46 1.28
1967 2524 9.109393 TCGGCTATTGGCTTATGAATAATATTC 57.891 33.333 6.07 6.07 41.46 1.75
1968 2525 9.113838 CGGCTATTGGCTTATGAATAATATTCT 57.886 33.333 13.45 3.20 41.46 2.40
1992 2549 9.231297 TCTTATATGATGGTATAAGCCAAAAGC 57.769 33.333 8.21 0.00 41.33 3.51
1993 2550 6.840780 ATATGATGGTATAAGCCAAAAGCC 57.159 37.500 0.00 0.00 45.47 4.35
1994 2551 2.948979 TGATGGTATAAGCCAAAAGCCG 59.051 45.455 0.00 0.00 45.47 5.52
1995 2552 2.791347 TGGTATAAGCCAAAAGCCGA 57.209 45.000 0.00 0.00 45.47 5.54
1996 2553 3.074675 TGGTATAAGCCAAAAGCCGAA 57.925 42.857 0.00 0.00 45.47 4.30
1997 2554 3.013921 TGGTATAAGCCAAAAGCCGAAG 58.986 45.455 0.00 0.00 45.47 3.79
1998 2555 2.223502 GGTATAAGCCAAAAGCCGAAGC 60.224 50.000 0.00 0.00 45.47 3.86
1999 2556 1.544724 ATAAGCCAAAAGCCGAAGCA 58.455 45.000 0.00 0.00 45.47 3.91
2000 2557 1.323412 TAAGCCAAAAGCCGAAGCAA 58.677 45.000 0.00 0.00 45.47 3.91
2001 2558 0.463620 AAGCCAAAAGCCGAAGCAAA 59.536 45.000 0.00 0.00 45.47 3.68
2002 2559 0.463620 AGCCAAAAGCCGAAGCAAAA 59.536 45.000 0.00 0.00 45.47 2.44
2003 2560 1.134551 AGCCAAAAGCCGAAGCAAAAA 60.135 42.857 0.00 0.00 45.47 1.94
2072 2629 8.683550 AAAACTGTAAAAACAGAAGTACAAGC 57.316 30.769 12.23 0.00 39.99 4.01
2073 2630 6.373186 ACTGTAAAAACAGAAGTACAAGCC 57.627 37.500 12.23 0.00 39.99 4.35
2074 2631 5.298527 ACTGTAAAAACAGAAGTACAAGCCC 59.701 40.000 12.23 0.00 39.99 5.19
2075 2632 5.194432 TGTAAAAACAGAAGTACAAGCCCA 58.806 37.500 0.00 0.00 0.00 5.36
2076 2633 5.652891 TGTAAAAACAGAAGTACAAGCCCAA 59.347 36.000 0.00 0.00 0.00 4.12
2077 2634 5.869649 AAAAACAGAAGTACAAGCCCAAT 57.130 34.783 0.00 0.00 0.00 3.16
2078 2635 5.869649 AAAACAGAAGTACAAGCCCAATT 57.130 34.783 0.00 0.00 0.00 2.32
2079 2636 6.969993 AAAACAGAAGTACAAGCCCAATTA 57.030 33.333 0.00 0.00 0.00 1.40
2080 2637 6.969993 AAACAGAAGTACAAGCCCAATTAA 57.030 33.333 0.00 0.00 0.00 1.40
2081 2638 6.969993 AACAGAAGTACAAGCCCAATTAAA 57.030 33.333 0.00 0.00 0.00 1.52
2082 2639 6.327279 ACAGAAGTACAAGCCCAATTAAAC 57.673 37.500 0.00 0.00 0.00 2.01
2083 2640 5.830991 ACAGAAGTACAAGCCCAATTAAACA 59.169 36.000 0.00 0.00 0.00 2.83
2084 2641 6.322712 ACAGAAGTACAAGCCCAATTAAACAA 59.677 34.615 0.00 0.00 0.00 2.83
2085 2642 6.863126 CAGAAGTACAAGCCCAATTAAACAAG 59.137 38.462 0.00 0.00 0.00 3.16
2086 2643 6.775629 AGAAGTACAAGCCCAATTAAACAAGA 59.224 34.615 0.00 0.00 0.00 3.02
2087 2644 6.327279 AGTACAAGCCCAATTAAACAAGAC 57.673 37.500 0.00 0.00 0.00 3.01
2088 2645 6.068670 AGTACAAGCCCAATTAAACAAGACT 58.931 36.000 0.00 0.00 0.00 3.24
2089 2646 5.869649 ACAAGCCCAATTAAACAAGACTT 57.130 34.783 0.00 0.00 0.00 3.01
2110 2669 2.610438 AGCCAACCCACATGAAGAAT 57.390 45.000 0.00 0.00 0.00 2.40
2127 2686 0.033796 AATCCCGTCTACCTCACCGA 60.034 55.000 0.00 0.00 0.00 4.69
2144 2703 3.608506 CACCGACAGAGAAATTGTAGTCG 59.391 47.826 9.52 9.52 45.82 4.18
2186 3989 7.604657 AGACCGAATCATAATCCTAGAAACT 57.395 36.000 0.00 0.00 0.00 2.66
2207 4013 6.763715 ACTACACACACCATTATGGGATAT 57.236 37.500 16.35 0.00 43.37 1.63
2209 4015 7.907389 ACTACACACACCATTATGGGATATAG 58.093 38.462 16.35 10.94 43.37 1.31
2215 4021 3.711704 ACCATTATGGGATATAGGAGCCG 59.288 47.826 16.35 0.00 43.37 5.52
2228 4561 3.359695 AGGAGCCGCAATAAAAACCTA 57.640 42.857 0.00 0.00 0.00 3.08
2240 4574 1.975660 AAAACCTACCGCAAGAGCAA 58.024 45.000 0.00 0.00 42.27 3.91
2253 4587 3.250762 GCAAGAGCAAGACATAACACACA 59.749 43.478 0.00 0.00 41.58 3.72
2274 4608 2.126189 GAAGAACGTCGACCGGGG 60.126 66.667 10.58 0.00 42.24 5.73
2325 4664 4.441356 GCAGAACAACCAACATGAAGGAAA 60.441 41.667 13.75 0.00 0.00 3.13
2406 4757 7.856145 AGATTCAACATCAGGTTTGATACTC 57.144 36.000 0.00 0.00 42.12 2.59
2412 4763 4.532126 ACATCAGGTTTGATACTCTGTCCA 59.468 41.667 0.00 0.00 42.12 4.02
2434 4785 2.047274 CGCCGACACCCTCACATT 60.047 61.111 0.00 0.00 0.00 2.71
2450 4801 5.012458 CCTCACATTGCCCAATAGATCTAGA 59.988 44.000 8.70 0.00 0.00 2.43
2499 4850 1.939934 CAAGCCTATCGCCGATTTTGA 59.060 47.619 4.31 0.00 38.78 2.69
2529 4880 0.985490 GTCAGGGCAGGGAGGAGATT 60.985 60.000 0.00 0.00 0.00 2.40
2573 4924 4.322385 GTTGTCGCCGCCCAACAC 62.322 66.667 12.53 0.00 40.46 3.32
2574 4925 4.858680 TTGTCGCCGCCCAACACA 62.859 61.111 0.00 0.00 0.00 3.72
2575 4926 4.634703 TGTCGCCGCCCAACACAT 62.635 61.111 0.00 0.00 0.00 3.21
2576 4927 4.101790 GTCGCCGCCCAACACATG 62.102 66.667 0.00 0.00 0.00 3.21
2577 4928 4.321966 TCGCCGCCCAACACATGA 62.322 61.111 0.00 0.00 0.00 3.07
2578 4929 3.361158 CGCCGCCCAACACATGAA 61.361 61.111 0.00 0.00 0.00 2.57
2617 4993 2.249844 TTGGACCAAGAAACCGAGTC 57.750 50.000 1.69 0.00 0.00 3.36
2627 5003 1.000618 GAAACCGAGTCTCCCTTCGTT 59.999 52.381 0.00 0.00 0.00 3.85
2630 5006 0.889306 CCGAGTCTCCCTTCGTTTCT 59.111 55.000 0.00 0.00 0.00 2.52
2631 5007 2.089980 CCGAGTCTCCCTTCGTTTCTA 58.910 52.381 0.00 0.00 0.00 2.10
2672 5048 2.272146 GGCCATGCCGGAGAAGAA 59.728 61.111 5.05 0.00 39.62 2.52
2696 5073 4.559153 GTTAAACCTAGTCGCCTTGTACA 58.441 43.478 0.00 0.00 0.00 2.90
2697 5074 3.975168 AAACCTAGTCGCCTTGTACAT 57.025 42.857 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.072948 GCTAAAACCGGCCAAATTTGTTAAAT 60.073 34.615 16.73 0.00 0.00 1.40
1 2 5.236695 GCTAAAACCGGCCAAATTTGTTAAA 59.763 36.000 16.73 0.00 0.00 1.52
2 3 4.750598 GCTAAAACCGGCCAAATTTGTTAA 59.249 37.500 16.73 0.00 0.00 2.01
3 4 4.039366 AGCTAAAACCGGCCAAATTTGTTA 59.961 37.500 16.73 6.28 0.00 2.41
4 5 3.135225 GCTAAAACCGGCCAAATTTGTT 58.865 40.909 16.73 5.46 0.00 2.83
5 6 2.367241 AGCTAAAACCGGCCAAATTTGT 59.633 40.909 16.73 0.00 0.00 2.83
6 7 3.038788 AGCTAAAACCGGCCAAATTTG 57.961 42.857 11.40 11.40 0.00 2.32
7 8 3.181459 ACAAGCTAAAACCGGCCAAATTT 60.181 39.130 0.00 2.50 0.00 1.82
8 9 2.367241 ACAAGCTAAAACCGGCCAAATT 59.633 40.909 0.00 0.00 0.00 1.82
9 10 1.967779 ACAAGCTAAAACCGGCCAAAT 59.032 42.857 0.00 0.00 0.00 2.32
10 11 1.067821 CACAAGCTAAAACCGGCCAAA 59.932 47.619 0.00 0.00 0.00 3.28
11 12 0.671251 CACAAGCTAAAACCGGCCAA 59.329 50.000 0.00 0.00 0.00 4.52
12 13 1.801309 GCACAAGCTAAAACCGGCCA 61.801 55.000 0.00 0.00 37.91 5.36
13 14 1.080772 GCACAAGCTAAAACCGGCC 60.081 57.895 0.00 0.00 37.91 6.13
14 15 1.442017 CGCACAAGCTAAAACCGGC 60.442 57.895 0.00 0.00 39.10 6.13
15 16 0.385473 CACGCACAAGCTAAAACCGG 60.385 55.000 0.00 0.00 39.10 5.28
16 17 0.584396 TCACGCACAAGCTAAAACCG 59.416 50.000 0.00 0.00 39.10 4.44
17 18 1.069227 CCTCACGCACAAGCTAAAACC 60.069 52.381 0.00 0.00 39.10 3.27
18 19 1.602377 ACCTCACGCACAAGCTAAAAC 59.398 47.619 0.00 0.00 39.10 2.43
19 20 1.961793 ACCTCACGCACAAGCTAAAA 58.038 45.000 0.00 0.00 39.10 1.52
20 21 1.871039 GAACCTCACGCACAAGCTAAA 59.129 47.619 0.00 0.00 39.10 1.85
21 22 1.070134 AGAACCTCACGCACAAGCTAA 59.930 47.619 0.00 0.00 39.10 3.09
22 23 0.679505 AGAACCTCACGCACAAGCTA 59.320 50.000 0.00 0.00 39.10 3.32
23 24 0.601311 GAGAACCTCACGCACAAGCT 60.601 55.000 0.00 0.00 39.10 3.74
24 25 1.569479 GGAGAACCTCACGCACAAGC 61.569 60.000 0.00 0.00 32.42 4.01
25 26 0.034059 AGGAGAACCTCACGCACAAG 59.966 55.000 0.00 0.00 44.13 3.16
26 27 2.133195 AGGAGAACCTCACGCACAA 58.867 52.632 0.00 0.00 44.13 3.33
27 28 3.870955 AGGAGAACCTCACGCACA 58.129 55.556 0.00 0.00 44.13 4.57
36 37 4.821589 CCAGGCGCGAGGAGAACC 62.822 72.222 12.10 0.00 0.00 3.62
37 38 4.821589 CCCAGGCGCGAGGAGAAC 62.822 72.222 12.10 0.00 0.00 3.01
48 49 3.254024 ATGTCACGGTCACCCAGGC 62.254 63.158 0.00 0.00 0.00 4.85
49 50 1.375908 CATGTCACGGTCACCCAGG 60.376 63.158 0.00 0.00 0.00 4.45
50 51 2.034879 GCATGTCACGGTCACCCAG 61.035 63.158 0.00 0.00 0.00 4.45
51 52 2.031919 GCATGTCACGGTCACCCA 59.968 61.111 0.00 0.00 0.00 4.51
52 53 2.034879 CAGCATGTCACGGTCACCC 61.035 63.158 0.00 0.00 0.00 4.61
53 54 2.680913 GCAGCATGTCACGGTCACC 61.681 63.158 0.00 0.00 39.31 4.02
54 55 2.863153 GCAGCATGTCACGGTCAC 59.137 61.111 0.00 0.00 39.31 3.67
55 56 2.738139 CGCAGCATGTCACGGTCA 60.738 61.111 0.00 0.00 39.31 4.02
56 57 2.432456 TCGCAGCATGTCACGGTC 60.432 61.111 0.00 0.00 39.31 4.79
57 58 2.738521 GTCGCAGCATGTCACGGT 60.739 61.111 0.00 0.00 39.31 4.83
58 59 3.490759 GGTCGCAGCATGTCACGG 61.491 66.667 0.00 0.00 39.31 4.94
59 60 3.842126 CGGTCGCAGCATGTCACG 61.842 66.667 0.00 0.00 39.31 4.35
60 61 3.490759 CCGGTCGCAGCATGTCAC 61.491 66.667 0.00 0.00 39.31 3.67
71 72 3.642778 ATGAACTCACGGCCGGTCG 62.643 63.158 29.88 29.88 0.00 4.79
72 73 0.953960 AAATGAACTCACGGCCGGTC 60.954 55.000 31.76 17.81 0.00 4.79
73 74 0.953960 GAAATGAACTCACGGCCGGT 60.954 55.000 31.76 15.55 0.00 5.28
74 75 0.953471 TGAAATGAACTCACGGCCGG 60.953 55.000 31.76 18.67 0.00 6.13
75 76 0.443869 CTGAAATGAACTCACGGCCG 59.556 55.000 26.86 26.86 0.00 6.13
76 77 0.804989 CCTGAAATGAACTCACGGCC 59.195 55.000 0.00 0.00 0.00 6.13
77 78 1.734465 CTCCTGAAATGAACTCACGGC 59.266 52.381 0.00 0.00 0.00 5.68
78 79 1.734465 GCTCCTGAAATGAACTCACGG 59.266 52.381 0.00 0.00 0.00 4.94
79 80 2.414481 CTGCTCCTGAAATGAACTCACG 59.586 50.000 0.00 0.00 0.00 4.35
80 81 3.406764 ACTGCTCCTGAAATGAACTCAC 58.593 45.455 0.00 0.00 0.00 3.51
81 82 3.777106 ACTGCTCCTGAAATGAACTCA 57.223 42.857 0.00 0.00 0.00 3.41
82 83 4.826556 ACTACTGCTCCTGAAATGAACTC 58.173 43.478 0.00 0.00 0.00 3.01
83 84 4.899352 ACTACTGCTCCTGAAATGAACT 57.101 40.909 0.00 0.00 0.00 3.01
84 85 7.617041 AATTACTACTGCTCCTGAAATGAAC 57.383 36.000 0.00 0.00 0.00 3.18
85 86 9.905713 ATTAATTACTACTGCTCCTGAAATGAA 57.094 29.630 0.00 0.00 0.00 2.57
86 87 9.905713 AATTAATTACTACTGCTCCTGAAATGA 57.094 29.630 0.00 0.00 0.00 2.57
91 92 9.817809 CAGTTAATTAATTACTACTGCTCCTGA 57.182 33.333 19.68 0.00 29.56 3.86
92 93 8.552034 GCAGTTAATTAATTACTACTGCTCCTG 58.448 37.037 33.44 18.78 45.08 3.86
93 94 7.438459 CGCAGTTAATTAATTACTACTGCTCCT 59.562 37.037 34.93 12.99 45.67 3.69
94 95 7.224167 ACGCAGTTAATTAATTACTACTGCTCC 59.776 37.037 34.93 21.56 45.67 4.70
95 96 8.128016 ACGCAGTTAATTAATTACTACTGCTC 57.872 34.615 34.93 21.99 45.67 4.26
96 97 9.245962 CTACGCAGTTAATTAATTACTACTGCT 57.754 33.333 34.93 28.67 45.67 4.24
97 98 9.241317 TCTACGCAGTTAATTAATTACTACTGC 57.759 33.333 32.32 32.32 45.07 4.40
108 109 8.385111 GCACACTTTTATCTACGCAGTTAATTA 58.615 33.333 0.00 0.00 37.78 1.40
109 110 7.094975 TGCACACTTTTATCTACGCAGTTAATT 60.095 33.333 0.00 0.00 37.78 1.40
110 111 6.370442 TGCACACTTTTATCTACGCAGTTAAT 59.630 34.615 0.00 0.00 37.78 1.40
111 112 5.697178 TGCACACTTTTATCTACGCAGTTAA 59.303 36.000 0.00 0.00 37.78 2.01
112 113 5.231702 TGCACACTTTTATCTACGCAGTTA 58.768 37.500 0.00 0.00 37.78 2.24
113 114 4.062293 TGCACACTTTTATCTACGCAGTT 58.938 39.130 0.00 0.00 37.78 3.16
115 116 4.641954 CTTGCACACTTTTATCTACGCAG 58.358 43.478 0.00 0.00 0.00 5.18
116 117 3.120338 GCTTGCACACTTTTATCTACGCA 60.120 43.478 0.00 0.00 0.00 5.24
117 118 3.125316 AGCTTGCACACTTTTATCTACGC 59.875 43.478 0.00 0.00 0.00 4.42
118 119 4.928661 AGCTTGCACACTTTTATCTACG 57.071 40.909 0.00 0.00 0.00 3.51
119 120 6.673316 GCACTAGCTTGCACACTTTTATCTAC 60.673 42.308 5.50 0.00 42.49 2.59
120 121 5.351465 GCACTAGCTTGCACACTTTTATCTA 59.649 40.000 5.50 0.00 42.49 1.98
121 122 4.154918 GCACTAGCTTGCACACTTTTATCT 59.845 41.667 5.50 0.00 42.49 1.98
122 123 4.406943 GCACTAGCTTGCACACTTTTATC 58.593 43.478 5.50 0.00 42.49 1.75
123 124 3.191371 GGCACTAGCTTGCACACTTTTAT 59.809 43.478 12.28 0.00 44.94 1.40
124 125 2.552315 GGCACTAGCTTGCACACTTTTA 59.448 45.455 12.28 0.00 44.94 1.52
125 126 1.338020 GGCACTAGCTTGCACACTTTT 59.662 47.619 12.28 0.00 44.94 2.27
126 127 0.954452 GGCACTAGCTTGCACACTTT 59.046 50.000 12.28 0.00 44.94 2.66
127 128 1.230635 CGGCACTAGCTTGCACACTT 61.231 55.000 12.28 0.00 44.94 3.16
128 129 1.669115 CGGCACTAGCTTGCACACT 60.669 57.895 12.28 0.00 44.94 3.55
129 130 1.507141 AACGGCACTAGCTTGCACAC 61.507 55.000 12.28 0.00 44.94 3.82
130 131 0.817634 AAACGGCACTAGCTTGCACA 60.818 50.000 12.28 0.00 44.94 4.57
131 132 0.110192 GAAACGGCACTAGCTTGCAC 60.110 55.000 12.28 1.54 44.94 4.57
132 133 1.565156 CGAAACGGCACTAGCTTGCA 61.565 55.000 12.28 0.00 44.94 4.08
133 134 1.132640 CGAAACGGCACTAGCTTGC 59.867 57.895 1.52 1.52 42.18 4.01
134 135 0.438830 GTCGAAACGGCACTAGCTTG 59.561 55.000 0.00 0.00 41.70 4.01
135 136 0.669625 GGTCGAAACGGCACTAGCTT 60.670 55.000 0.00 0.00 41.70 3.74
136 137 1.080025 GGTCGAAACGGCACTAGCT 60.080 57.895 0.00 0.00 41.70 3.32
137 138 2.442188 CGGTCGAAACGGCACTAGC 61.442 63.158 3.07 0.00 41.10 3.42
138 139 1.080974 ACGGTCGAAACGGCACTAG 60.081 57.895 14.20 0.00 30.88 2.57
139 140 1.372004 CACGGTCGAAACGGCACTA 60.372 57.895 14.20 0.00 30.88 2.74
140 141 2.660552 CACGGTCGAAACGGCACT 60.661 61.111 14.20 0.00 30.88 4.40
141 142 4.364409 GCACGGTCGAAACGGCAC 62.364 66.667 14.20 1.16 30.88 5.01
144 145 3.759828 GTCGCACGGTCGAAACGG 61.760 66.667 14.20 5.59 40.43 4.44
145 146 4.099585 CGTCGCACGGTCGAAACG 62.100 66.667 8.98 8.98 40.43 3.60
146 147 2.726912 TCGTCGCACGGTCGAAAC 60.727 61.111 8.46 0.00 42.81 2.78
147 148 2.726912 GTCGTCGCACGGTCGAAA 60.727 61.111 11.21 0.00 42.81 3.46
148 149 4.688419 GGTCGTCGCACGGTCGAA 62.688 66.667 11.21 0.00 42.81 3.71
159 160 0.168568 GTCAGGAGAAGACGGTCGTC 59.831 60.000 15.00 15.00 44.86 4.20
160 161 0.250814 AGTCAGGAGAAGACGGTCGT 60.251 55.000 1.89 0.00 40.84 4.34
161 162 0.448593 GAGTCAGGAGAAGACGGTCG 59.551 60.000 1.89 0.00 40.84 4.79
162 163 1.741145 GAGAGTCAGGAGAAGACGGTC 59.259 57.143 0.00 0.00 40.84 4.79
163 164 1.614850 GGAGAGTCAGGAGAAGACGGT 60.615 57.143 0.00 0.00 40.84 4.83
164 165 1.099689 GGAGAGTCAGGAGAAGACGG 58.900 60.000 0.00 0.00 40.84 4.79
165 166 1.742831 CTGGAGAGTCAGGAGAAGACG 59.257 57.143 0.00 0.00 40.84 4.18
166 167 2.491693 CACTGGAGAGTCAGGAGAAGAC 59.508 54.545 0.00 0.00 38.98 3.01
167 168 2.376855 TCACTGGAGAGTCAGGAGAAGA 59.623 50.000 0.00 0.00 38.98 2.87
168 169 2.801483 TCACTGGAGAGTCAGGAGAAG 58.199 52.381 0.00 0.00 38.98 2.85
169 170 2.980246 TCACTGGAGAGTCAGGAGAA 57.020 50.000 0.00 0.00 38.98 2.87
170 171 2.980246 TTCACTGGAGAGTCAGGAGA 57.020 50.000 0.00 0.00 38.98 3.71
171 172 3.513119 TGAATTCACTGGAGAGTCAGGAG 59.487 47.826 3.38 0.00 38.98 3.69
172 173 3.510459 TGAATTCACTGGAGAGTCAGGA 58.490 45.455 3.38 0.00 38.98 3.86
173 174 3.969287 TGAATTCACTGGAGAGTCAGG 57.031 47.619 3.38 0.00 38.98 3.86
174 175 4.689812 CAGTTGAATTCACTGGAGAGTCAG 59.310 45.833 21.02 0.00 40.40 3.51
175 176 4.101585 ACAGTTGAATTCACTGGAGAGTCA 59.898 41.667 27.07 4.60 35.93 3.41
176 177 4.636249 ACAGTTGAATTCACTGGAGAGTC 58.364 43.478 27.07 7.39 35.93 3.36
177 178 4.696479 ACAGTTGAATTCACTGGAGAGT 57.304 40.909 27.07 13.30 35.93 3.24
178 179 6.226787 ACTAACAGTTGAATTCACTGGAGAG 58.773 40.000 27.07 23.08 35.93 3.20
179 180 6.174720 ACTAACAGTTGAATTCACTGGAGA 57.825 37.500 27.07 17.19 35.93 3.71
180 181 6.867662 AACTAACAGTTGAATTCACTGGAG 57.132 37.500 27.07 24.75 37.00 3.86
181 182 7.639113 AAAACTAACAGTTGAATTCACTGGA 57.361 32.000 27.07 18.95 38.66 3.86
213 214 3.873952 CAGTTGAATTTTCCCGGCAAAAA 59.126 39.130 7.50 11.04 0.00 1.94
214 215 3.118592 ACAGTTGAATTTTCCCGGCAAAA 60.119 39.130 5.59 5.59 0.00 2.44
215 216 2.432510 ACAGTTGAATTTTCCCGGCAAA 59.567 40.909 0.00 0.00 0.00 3.68
216 217 2.035632 ACAGTTGAATTTTCCCGGCAA 58.964 42.857 0.00 0.00 0.00 4.52
217 218 1.698506 ACAGTTGAATTTTCCCGGCA 58.301 45.000 0.00 0.00 0.00 5.69
218 219 2.812358 AACAGTTGAATTTTCCCGGC 57.188 45.000 0.00 0.00 0.00 6.13
219 220 3.506067 AGCTAACAGTTGAATTTTCCCGG 59.494 43.478 0.00 0.00 0.00 5.73
220 221 4.766404 AGCTAACAGTTGAATTTTCCCG 57.234 40.909 0.00 0.00 0.00 5.14
221 222 6.819397 ACTAGCTAACAGTTGAATTTTCCC 57.181 37.500 0.00 0.00 0.00 3.97
222 223 7.606839 AGGTACTAGCTAACAGTTGAATTTTCC 59.393 37.037 0.00 0.00 36.02 3.13
223 224 8.443937 CAGGTACTAGCTAACAGTTGAATTTTC 58.556 37.037 0.00 0.00 36.02 2.29
224 225 7.937394 ACAGGTACTAGCTAACAGTTGAATTTT 59.063 33.333 0.00 0.00 36.02 1.82
225 226 7.450903 ACAGGTACTAGCTAACAGTTGAATTT 58.549 34.615 0.00 0.00 36.02 1.82
226 227 7.005709 ACAGGTACTAGCTAACAGTTGAATT 57.994 36.000 0.00 0.00 36.02 2.17
227 228 6.607004 ACAGGTACTAGCTAACAGTTGAAT 57.393 37.500 0.00 0.00 36.02 2.57
228 229 7.373493 GTTACAGGTACTAGCTAACAGTTGAA 58.627 38.462 0.00 0.00 36.02 2.69
229 230 6.071728 GGTTACAGGTACTAGCTAACAGTTGA 60.072 42.308 0.00 0.00 36.02 3.18
230 231 6.098017 GGTTACAGGTACTAGCTAACAGTTG 58.902 44.000 0.00 0.00 36.02 3.16
231 232 5.105997 CGGTTACAGGTACTAGCTAACAGTT 60.106 44.000 0.00 0.00 36.02 3.16
232 233 4.397417 CGGTTACAGGTACTAGCTAACAGT 59.603 45.833 0.00 0.00 36.02 3.55
233 234 4.201990 CCGGTTACAGGTACTAGCTAACAG 60.202 50.000 0.00 0.00 36.02 3.16
234 235 3.696051 CCGGTTACAGGTACTAGCTAACA 59.304 47.826 0.00 0.00 36.02 2.41
235 236 3.947834 TCCGGTTACAGGTACTAGCTAAC 59.052 47.826 0.00 0.00 36.02 2.34
236 237 4.202441 CTCCGGTTACAGGTACTAGCTAA 58.798 47.826 0.00 0.00 36.02 3.09
237 238 3.434167 CCTCCGGTTACAGGTACTAGCTA 60.434 52.174 0.00 0.00 36.02 3.32
238 239 2.652590 CTCCGGTTACAGGTACTAGCT 58.347 52.381 0.00 0.00 36.02 3.32
239 240 1.680207 CCTCCGGTTACAGGTACTAGC 59.320 57.143 0.00 0.00 36.02 3.42
240 241 3.287867 TCCTCCGGTTACAGGTACTAG 57.712 52.381 0.00 0.00 36.02 2.57
241 242 3.737559 TTCCTCCGGTTACAGGTACTA 57.262 47.619 0.00 0.00 36.02 1.82
242 243 2.610438 TTCCTCCGGTTACAGGTACT 57.390 50.000 0.00 0.00 43.88 2.73
243 244 3.683365 TTTTCCTCCGGTTACAGGTAC 57.317 47.619 0.00 0.00 0.00 3.34
249 250 5.936372 AGATAACACTTTTTCCTCCGGTTAC 59.064 40.000 0.00 0.00 0.00 2.50
256 257 5.063564 CACGGCTAGATAACACTTTTTCCTC 59.936 44.000 0.00 0.00 0.00 3.71
260 261 4.901868 TCCACGGCTAGATAACACTTTTT 58.098 39.130 0.00 0.00 0.00 1.94
277 279 2.094894 GCATGTCTCACAGAATTCCACG 59.905 50.000 0.65 0.00 0.00 4.94
308 311 2.464459 GCGGATCAACGGAGGCTTG 61.464 63.158 0.00 0.00 0.00 4.01
353 356 7.653311 AGATTAATGTTTTTGGTTCAGCTGTTC 59.347 33.333 14.67 7.92 0.00 3.18
358 361 5.120674 GGCAGATTAATGTTTTTGGTTCAGC 59.879 40.000 0.00 0.00 0.00 4.26
365 368 2.027926 GCGCGGCAGATTAATGTTTTTG 59.972 45.455 8.83 0.00 0.00 2.44
366 369 2.258755 GCGCGGCAGATTAATGTTTTT 58.741 42.857 8.83 0.00 0.00 1.94
409 412 1.996713 GTTGCACACGTTCGTTCGC 60.997 57.895 8.25 8.25 0.00 4.70
555 572 3.817647 AGCTGATTCAGAAACAGTTGGAC 59.182 43.478 17.87 5.01 32.44 4.02
585 628 0.918983 TTCCATCCTTTGCCTCCGAT 59.081 50.000 0.00 0.00 0.00 4.18
632 708 5.392595 GGTGATACAAATAGGCTCGCAAAAA 60.393 40.000 0.00 0.00 0.00 1.94
633 709 4.095782 GGTGATACAAATAGGCTCGCAAAA 59.904 41.667 0.00 0.00 0.00 2.44
634 710 3.625764 GGTGATACAAATAGGCTCGCAAA 59.374 43.478 0.00 0.00 0.00 3.68
635 711 3.118408 AGGTGATACAAATAGGCTCGCAA 60.118 43.478 0.00 0.00 0.00 4.85
636 712 2.434336 AGGTGATACAAATAGGCTCGCA 59.566 45.455 0.00 0.00 0.00 5.10
637 713 3.113260 AGGTGATACAAATAGGCTCGC 57.887 47.619 0.00 0.00 0.00 5.03
638 714 4.693283 TCAAGGTGATACAAATAGGCTCG 58.307 43.478 0.00 0.00 0.00 5.03
639 715 6.058183 ACATCAAGGTGATACAAATAGGCTC 58.942 40.000 0.00 0.00 34.28 4.70
640 716 6.006275 ACATCAAGGTGATACAAATAGGCT 57.994 37.500 0.00 0.00 34.28 4.58
641 717 7.217200 TCTACATCAAGGTGATACAAATAGGC 58.783 38.462 0.00 0.00 34.28 3.93
647 723 9.817809 GTTCTTATCTACATCAAGGTGATACAA 57.182 33.333 0.00 0.00 34.28 2.41
648 724 8.135529 CGTTCTTATCTACATCAAGGTGATACA 58.864 37.037 0.00 0.00 34.28 2.29
649 725 7.115095 GCGTTCTTATCTACATCAAGGTGATAC 59.885 40.741 0.00 0.00 34.28 2.24
650 726 7.145985 GCGTTCTTATCTACATCAAGGTGATA 58.854 38.462 0.00 0.00 34.28 2.15
651 727 5.986135 GCGTTCTTATCTACATCAAGGTGAT 59.014 40.000 0.00 0.00 37.65 3.06
652 728 5.348986 GCGTTCTTATCTACATCAAGGTGA 58.651 41.667 0.00 0.00 0.00 4.02
653 729 4.508124 GGCGTTCTTATCTACATCAAGGTG 59.492 45.833 0.00 0.00 0.00 4.00
654 730 4.406003 AGGCGTTCTTATCTACATCAAGGT 59.594 41.667 0.00 0.00 0.00 3.50
655 731 4.950050 AGGCGTTCTTATCTACATCAAGG 58.050 43.478 0.00 0.00 0.00 3.61
742 821 2.655474 GCATCGTTAGCCTACGTTATCG 59.345 50.000 0.00 0.00 42.01 2.92
754 833 3.630148 CAGCGGCGGCATCGTTAG 61.630 66.667 19.21 0.00 43.41 2.34
823 908 2.692041 GGGCTGCTGAATTGATTAGCTT 59.308 45.455 0.00 0.00 38.25 3.74
829 914 1.099879 GCGAGGGCTGCTGAATTGAT 61.100 55.000 0.00 0.00 35.83 2.57
830 915 1.746615 GCGAGGGCTGCTGAATTGA 60.747 57.895 0.00 0.00 35.83 2.57
831 916 1.588824 TTGCGAGGGCTGCTGAATTG 61.589 55.000 0.00 0.00 40.82 2.32
832 917 0.895100 TTTGCGAGGGCTGCTGAATT 60.895 50.000 0.00 0.00 40.82 2.17
833 918 0.895100 TTTTGCGAGGGCTGCTGAAT 60.895 50.000 0.00 0.00 40.82 2.57
834 919 1.106351 TTTTTGCGAGGGCTGCTGAA 61.106 50.000 0.00 0.00 40.82 3.02
835 920 1.528076 TTTTTGCGAGGGCTGCTGA 60.528 52.632 0.00 0.00 40.82 4.26
836 921 3.041701 TTTTTGCGAGGGCTGCTG 58.958 55.556 0.00 0.00 40.82 4.41
871 1133 2.358003 AGTGCCGCTGAAGCTGAC 60.358 61.111 0.10 0.00 39.32 3.51
961 1453 5.363979 TTGACGTGTGCATTTATAGCAAA 57.636 34.783 0.00 0.00 44.64 3.68
1028 1523 7.024768 GCGTCTAGTCTAGGAATTATAGCAAG 58.975 42.308 7.05 0.00 0.00 4.01
1029 1524 6.072064 GGCGTCTAGTCTAGGAATTATAGCAA 60.072 42.308 7.05 0.00 0.00 3.91
1030 1525 5.415077 GGCGTCTAGTCTAGGAATTATAGCA 59.585 44.000 7.05 0.00 0.00 3.49
1031 1526 5.648960 AGGCGTCTAGTCTAGGAATTATAGC 59.351 44.000 7.05 2.34 29.53 2.97
1032 1527 6.316890 GGAGGCGTCTAGTCTAGGAATTATAG 59.683 46.154 7.05 0.00 33.03 1.31
1033 1528 6.179040 GGAGGCGTCTAGTCTAGGAATTATA 58.821 44.000 7.05 0.00 33.03 0.98
1034 1529 5.011586 GGAGGCGTCTAGTCTAGGAATTAT 58.988 45.833 7.05 0.00 33.03 1.28
1095 1610 3.968568 ATGATACGCGCCGCCGTA 61.969 61.111 5.73 14.10 46.28 4.02
1481 2032 2.517402 GCCCGTCAAACACACCCA 60.517 61.111 0.00 0.00 0.00 4.51
1485 2036 2.904866 GGCAGCCCGTCAAACACA 60.905 61.111 0.00 0.00 0.00 3.72
1555 2106 2.829720 AGCGACCAGGACTGTTGTATTA 59.170 45.455 0.00 0.00 0.00 0.98
1562 2113 1.478510 CAATCTAGCGACCAGGACTGT 59.521 52.381 0.00 0.00 0.00 3.55
1575 2126 9.838339 AAGTCACCCTTGATTATAACAATCTAG 57.162 33.333 0.00 2.67 33.11 2.43
1613 2164 3.501828 ACGCAAACATAAACATGAGCAGA 59.498 39.130 0.00 0.00 0.00 4.26
1692 2245 4.227527 AGCCCTTTACTTTAGCCATGTACT 59.772 41.667 0.00 0.00 0.00 2.73
1693 2246 4.524053 AGCCCTTTACTTTAGCCATGTAC 58.476 43.478 0.00 0.00 0.00 2.90
1694 2247 4.855298 AGCCCTTTACTTTAGCCATGTA 57.145 40.909 0.00 0.00 0.00 2.29
1746 2302 8.461222 TGATGTTTGTCAGATATAGCAAAAAGG 58.539 33.333 0.00 0.00 33.43 3.11
1816 2373 4.956075 GGGTTGAAAGACATTGGATACCAT 59.044 41.667 0.00 0.00 31.53 3.55
1827 2384 5.104900 GCCTAGAAGATAGGGTTGAAAGACA 60.105 44.000 3.25 0.00 35.29 3.41
1840 2397 5.253330 CAAACAAACAGGGCCTAGAAGATA 58.747 41.667 5.28 0.00 0.00 1.98
1848 2405 3.549730 GCCAAACAAACAGGGCCT 58.450 55.556 0.00 0.00 40.55 5.19
1851 2408 2.708216 AAAAGGCCAAACAAACAGGG 57.292 45.000 5.01 0.00 0.00 4.45
1852 2409 4.400529 AGTAAAAGGCCAAACAAACAGG 57.599 40.909 5.01 0.00 0.00 4.00
1853 2410 6.735678 AAAAGTAAAAGGCCAAACAAACAG 57.264 33.333 5.01 0.00 0.00 3.16
1854 2411 7.387643 AGTAAAAGTAAAAGGCCAAACAAACA 58.612 30.769 5.01 0.00 0.00 2.83
1855 2412 7.837202 AGTAAAAGTAAAAGGCCAAACAAAC 57.163 32.000 5.01 0.00 0.00 2.93
1856 2413 8.850007 AAAGTAAAAGTAAAAGGCCAAACAAA 57.150 26.923 5.01 0.00 0.00 2.83
1857 2414 8.850007 AAAAGTAAAAGTAAAAGGCCAAACAA 57.150 26.923 5.01 0.00 0.00 2.83
1858 2415 9.368674 GTAAAAGTAAAAGTAAAAGGCCAAACA 57.631 29.630 5.01 0.00 0.00 2.83
1859 2416 8.533965 CGTAAAAGTAAAAGTAAAAGGCCAAAC 58.466 33.333 5.01 0.00 0.00 2.93
1860 2417 7.705752 CCGTAAAAGTAAAAGTAAAAGGCCAAA 59.294 33.333 5.01 0.00 0.00 3.28
1861 2418 7.201835 CCGTAAAAGTAAAAGTAAAAGGCCAA 58.798 34.615 5.01 0.00 0.00 4.52
1862 2419 6.735419 GCCGTAAAAGTAAAAGTAAAAGGCCA 60.735 38.462 5.01 0.00 32.90 5.36
1863 2420 5.630680 GCCGTAAAAGTAAAAGTAAAAGGCC 59.369 40.000 0.00 0.00 32.90 5.19
1864 2421 6.441274 AGCCGTAAAAGTAAAAGTAAAAGGC 58.559 36.000 0.00 0.00 38.66 4.35
1865 2422 8.861033 AAAGCCGTAAAAGTAAAAGTAAAAGG 57.139 30.769 0.00 0.00 0.00 3.11
1867 2424 9.299963 GGAAAAGCCGTAAAAGTAAAAGTAAAA 57.700 29.630 0.00 0.00 0.00 1.52
1868 2425 8.465201 TGGAAAAGCCGTAAAAGTAAAAGTAAA 58.535 29.630 0.00 0.00 40.66 2.01
1869 2426 7.994194 TGGAAAAGCCGTAAAAGTAAAAGTAA 58.006 30.769 0.00 0.00 40.66 2.24
1870 2427 7.565323 TGGAAAAGCCGTAAAAGTAAAAGTA 57.435 32.000 0.00 0.00 40.66 2.24
1871 2428 6.453926 TGGAAAAGCCGTAAAAGTAAAAGT 57.546 33.333 0.00 0.00 40.66 2.66
1872 2429 7.940178 AATGGAAAAGCCGTAAAAGTAAAAG 57.060 32.000 0.00 0.00 40.66 2.27
1873 2430 8.604890 CAAAATGGAAAAGCCGTAAAAGTAAAA 58.395 29.630 0.00 0.00 40.66 1.52
1874 2431 7.980099 TCAAAATGGAAAAGCCGTAAAAGTAAA 59.020 29.630 0.00 0.00 40.66 2.01
1875 2432 7.490000 TCAAAATGGAAAAGCCGTAAAAGTAA 58.510 30.769 0.00 0.00 40.66 2.24
1876 2433 7.040473 TCAAAATGGAAAAGCCGTAAAAGTA 57.960 32.000 0.00 0.00 40.66 2.24
1877 2434 5.908341 TCAAAATGGAAAAGCCGTAAAAGT 58.092 33.333 0.00 0.00 40.66 2.66
1878 2435 8.527567 TTATCAAAATGGAAAAGCCGTAAAAG 57.472 30.769 0.00 0.00 40.66 2.27
1879 2436 8.888579 TTTATCAAAATGGAAAAGCCGTAAAA 57.111 26.923 0.00 0.00 40.66 1.52
1880 2437 8.888579 TTTTATCAAAATGGAAAAGCCGTAAA 57.111 26.923 0.00 0.00 40.66 2.01
1881 2438 8.888579 TTTTTATCAAAATGGAAAAGCCGTAA 57.111 26.923 0.00 0.00 40.66 3.18
1904 2461 1.839424 AGGAGCTTATGCGGCTTTTT 58.161 45.000 0.00 0.00 45.42 1.94
1905 2462 2.710096 TAGGAGCTTATGCGGCTTTT 57.290 45.000 0.00 0.00 45.42 2.27
1906 2463 2.710096 TTAGGAGCTTATGCGGCTTT 57.290 45.000 0.00 0.00 45.42 3.51
1907 2464 2.710096 TTTAGGAGCTTATGCGGCTT 57.290 45.000 0.00 0.00 45.42 4.35
1908 2465 2.938956 ATTTAGGAGCTTATGCGGCT 57.061 45.000 0.00 0.00 45.42 5.52
1909 2466 3.003480 CCTATTTAGGAGCTTATGCGGC 58.997 50.000 0.00 0.00 46.63 6.53
1910 2467 3.008049 ACCCTATTTAGGAGCTTATGCGG 59.992 47.826 5.16 0.00 46.63 5.69
1911 2468 4.273148 ACCCTATTTAGGAGCTTATGCG 57.727 45.455 5.16 0.00 46.63 4.73
1912 2469 6.961360 AAAACCCTATTTAGGAGCTTATGC 57.039 37.500 5.16 0.00 46.63 3.14
1913 2470 9.574516 ACATAAAACCCTATTTAGGAGCTTATG 57.425 33.333 18.27 18.27 46.63 1.90
1915 2472 9.984590 AAACATAAAACCCTATTTAGGAGCTTA 57.015 29.630 5.16 0.80 46.63 3.09
1916 2473 8.895141 AAACATAAAACCCTATTTAGGAGCTT 57.105 30.769 5.16 0.00 46.63 3.74
1917 2474 7.282450 CGAAACATAAAACCCTATTTAGGAGCT 59.718 37.037 5.16 0.00 46.63 4.09
1918 2475 7.415229 CGAAACATAAAACCCTATTTAGGAGC 58.585 38.462 5.16 0.00 46.63 4.70
1919 2476 7.468220 GCCGAAACATAAAACCCTATTTAGGAG 60.468 40.741 5.16 0.00 46.63 3.69
1920 2477 6.319405 GCCGAAACATAAAACCCTATTTAGGA 59.681 38.462 5.16 0.00 46.63 2.94
1921 2478 6.320418 AGCCGAAACATAAAACCCTATTTAGG 59.680 38.462 0.00 0.00 43.25 2.69
1922 2479 7.329588 AGCCGAAACATAAAACCCTATTTAG 57.670 36.000 0.00 0.00 0.00 1.85
1923 2480 8.983702 ATAGCCGAAACATAAAACCCTATTTA 57.016 30.769 0.00 0.00 0.00 1.40
1924 2481 7.891498 ATAGCCGAAACATAAAACCCTATTT 57.109 32.000 0.00 0.00 0.00 1.40
1925 2482 7.201875 CCAATAGCCGAAACATAAAACCCTATT 60.202 37.037 0.00 0.00 0.00 1.73
1926 2483 6.264518 CCAATAGCCGAAACATAAAACCCTAT 59.735 38.462 0.00 0.00 0.00 2.57
1927 2484 5.591067 CCAATAGCCGAAACATAAAACCCTA 59.409 40.000 0.00 0.00 0.00 3.53
1928 2485 4.401202 CCAATAGCCGAAACATAAAACCCT 59.599 41.667 0.00 0.00 0.00 4.34
1929 2486 4.678622 CCAATAGCCGAAACATAAAACCC 58.321 43.478 0.00 0.00 0.00 4.11
1930 2487 4.109766 GCCAATAGCCGAAACATAAAACC 58.890 43.478 0.00 0.00 34.35 3.27
1931 2488 4.993905 AGCCAATAGCCGAAACATAAAAC 58.006 39.130 0.00 0.00 45.47 2.43
1932 2489 5.652994 AAGCCAATAGCCGAAACATAAAA 57.347 34.783 0.00 0.00 45.47 1.52
1933 2490 6.544197 TCATAAGCCAATAGCCGAAACATAAA 59.456 34.615 0.00 0.00 45.47 1.40
1934 2491 6.058833 TCATAAGCCAATAGCCGAAACATAA 58.941 36.000 0.00 0.00 45.47 1.90
1935 2492 5.616270 TCATAAGCCAATAGCCGAAACATA 58.384 37.500 0.00 0.00 45.47 2.29
1936 2493 4.460263 TCATAAGCCAATAGCCGAAACAT 58.540 39.130 0.00 0.00 45.47 2.71
1937 2494 3.879998 TCATAAGCCAATAGCCGAAACA 58.120 40.909 0.00 0.00 45.47 2.83
1938 2495 4.893424 TTCATAAGCCAATAGCCGAAAC 57.107 40.909 0.00 0.00 45.47 2.78
1939 2496 7.759489 ATTATTCATAAGCCAATAGCCGAAA 57.241 32.000 0.00 0.00 45.47 3.46
1940 2497 9.461312 AATATTATTCATAAGCCAATAGCCGAA 57.539 29.630 0.00 0.00 45.47 4.30
1941 2498 9.109393 GAATATTATTCATAAGCCAATAGCCGA 57.891 33.333 10.84 0.00 45.47 5.54
1942 2499 9.113838 AGAATATTATTCATAAGCCAATAGCCG 57.886 33.333 16.68 0.00 45.47 5.52
1966 2523 9.231297 GCTTTTGGCTTATACCATCATATAAGA 57.769 33.333 14.03 0.00 43.48 2.10
1967 2524 8.462016 GGCTTTTGGCTTATACCATCATATAAG 58.538 37.037 7.79 7.79 43.58 1.73
1968 2525 7.120579 CGGCTTTTGGCTTATACCATCATATAA 59.879 37.037 0.00 0.00 40.13 0.98
1969 2526 6.597672 CGGCTTTTGGCTTATACCATCATATA 59.402 38.462 0.00 0.00 40.13 0.86
1970 2527 5.415701 CGGCTTTTGGCTTATACCATCATAT 59.584 40.000 0.00 0.00 40.13 1.78
1971 2528 4.759693 CGGCTTTTGGCTTATACCATCATA 59.240 41.667 0.00 0.00 40.13 2.15
1972 2529 3.569701 CGGCTTTTGGCTTATACCATCAT 59.430 43.478 0.00 0.00 40.13 2.45
1973 2530 2.948979 CGGCTTTTGGCTTATACCATCA 59.051 45.455 0.00 0.00 40.13 3.07
1974 2531 3.211045 TCGGCTTTTGGCTTATACCATC 58.789 45.455 0.00 0.00 40.13 3.51
1975 2532 3.290948 TCGGCTTTTGGCTTATACCAT 57.709 42.857 0.00 0.00 40.13 3.55
1976 2533 2.791347 TCGGCTTTTGGCTTATACCA 57.209 45.000 0.00 0.00 43.55 3.25
1977 2534 2.223502 GCTTCGGCTTTTGGCTTATACC 60.224 50.000 0.00 0.00 43.55 2.73
1978 2535 2.422127 TGCTTCGGCTTTTGGCTTATAC 59.578 45.455 0.00 0.00 43.55 1.47
1979 2536 2.717390 TGCTTCGGCTTTTGGCTTATA 58.283 42.857 0.00 0.00 43.55 0.98
1980 2537 1.544724 TGCTTCGGCTTTTGGCTTAT 58.455 45.000 0.00 0.00 43.55 1.73
1981 2538 1.323412 TTGCTTCGGCTTTTGGCTTA 58.677 45.000 0.00 0.00 43.55 3.09
1982 2539 0.463620 TTTGCTTCGGCTTTTGGCTT 59.536 45.000 0.00 0.00 43.55 4.35
1983 2540 0.463620 TTTTGCTTCGGCTTTTGGCT 59.536 45.000 0.00 0.00 43.55 4.75
1984 2541 1.294857 TTTTTGCTTCGGCTTTTGGC 58.705 45.000 0.00 0.00 42.37 4.52
2046 2603 9.135843 GCTTGTACTTCTGTTTTTACAGTTTTT 57.864 29.630 5.32 0.00 38.75 1.94
2047 2604 7.758076 GGCTTGTACTTCTGTTTTTACAGTTTT 59.242 33.333 5.32 0.00 38.75 2.43
2048 2605 7.255569 GGCTTGTACTTCTGTTTTTACAGTTT 58.744 34.615 5.32 0.00 38.75 2.66
2049 2606 6.183360 GGGCTTGTACTTCTGTTTTTACAGTT 60.183 38.462 5.32 0.00 38.75 3.16
2050 2607 5.298527 GGGCTTGTACTTCTGTTTTTACAGT 59.701 40.000 5.32 0.00 38.75 3.55
2051 2608 5.298276 TGGGCTTGTACTTCTGTTTTTACAG 59.702 40.000 0.00 0.00 39.00 2.74
2052 2609 5.194432 TGGGCTTGTACTTCTGTTTTTACA 58.806 37.500 0.00 0.00 0.00 2.41
2053 2610 5.761165 TGGGCTTGTACTTCTGTTTTTAC 57.239 39.130 0.00 0.00 0.00 2.01
2054 2611 6.969993 ATTGGGCTTGTACTTCTGTTTTTA 57.030 33.333 0.00 0.00 0.00 1.52
2055 2612 5.869649 ATTGGGCTTGTACTTCTGTTTTT 57.130 34.783 0.00 0.00 0.00 1.94
2056 2613 5.869649 AATTGGGCTTGTACTTCTGTTTT 57.130 34.783 0.00 0.00 0.00 2.43
2057 2614 6.969993 TTAATTGGGCTTGTACTTCTGTTT 57.030 33.333 0.00 0.00 0.00 2.83
2058 2615 6.322712 TGTTTAATTGGGCTTGTACTTCTGTT 59.677 34.615 0.00 0.00 0.00 3.16
2059 2616 5.830991 TGTTTAATTGGGCTTGTACTTCTGT 59.169 36.000 0.00 0.00 0.00 3.41
2060 2617 6.325919 TGTTTAATTGGGCTTGTACTTCTG 57.674 37.500 0.00 0.00 0.00 3.02
2061 2618 6.775629 TCTTGTTTAATTGGGCTTGTACTTCT 59.224 34.615 0.00 0.00 0.00 2.85
2062 2619 6.861572 GTCTTGTTTAATTGGGCTTGTACTTC 59.138 38.462 0.00 0.00 0.00 3.01
2063 2620 6.549736 AGTCTTGTTTAATTGGGCTTGTACTT 59.450 34.615 0.00 0.00 0.00 2.24
2064 2621 6.068670 AGTCTTGTTTAATTGGGCTTGTACT 58.931 36.000 0.00 0.00 0.00 2.73
2065 2622 6.327279 AGTCTTGTTTAATTGGGCTTGTAC 57.673 37.500 0.00 0.00 0.00 2.90
2066 2623 6.969993 AAGTCTTGTTTAATTGGGCTTGTA 57.030 33.333 0.00 0.00 0.00 2.41
2067 2624 5.869649 AAGTCTTGTTTAATTGGGCTTGT 57.130 34.783 0.00 0.00 0.00 3.16
2068 2625 6.366061 GCTAAAGTCTTGTTTAATTGGGCTTG 59.634 38.462 0.00 0.00 0.00 4.01
2069 2626 6.455647 GCTAAAGTCTTGTTTAATTGGGCTT 58.544 36.000 0.00 0.00 0.00 4.35
2070 2627 5.047306 GGCTAAAGTCTTGTTTAATTGGGCT 60.047 40.000 0.00 0.00 0.00 5.19
2071 2628 5.168569 GGCTAAAGTCTTGTTTAATTGGGC 58.831 41.667 0.00 0.00 0.00 5.36
2072 2629 6.339587 TGGCTAAAGTCTTGTTTAATTGGG 57.660 37.500 0.00 0.00 0.00 4.12
2073 2630 6.645003 GGTTGGCTAAAGTCTTGTTTAATTGG 59.355 38.462 0.00 0.00 0.00 3.16
2074 2631 6.645003 GGGTTGGCTAAAGTCTTGTTTAATTG 59.355 38.462 0.00 0.00 0.00 2.32
2075 2632 6.325286 TGGGTTGGCTAAAGTCTTGTTTAATT 59.675 34.615 0.00 0.00 0.00 1.40
2076 2633 5.836358 TGGGTTGGCTAAAGTCTTGTTTAAT 59.164 36.000 0.00 0.00 0.00 1.40
2077 2634 5.068067 GTGGGTTGGCTAAAGTCTTGTTTAA 59.932 40.000 0.00 0.00 0.00 1.52
2078 2635 4.581409 GTGGGTTGGCTAAAGTCTTGTTTA 59.419 41.667 0.00 0.00 0.00 2.01
2079 2636 3.383505 GTGGGTTGGCTAAAGTCTTGTTT 59.616 43.478 0.00 0.00 0.00 2.83
2080 2637 2.956333 GTGGGTTGGCTAAAGTCTTGTT 59.044 45.455 0.00 0.00 0.00 2.83
2081 2638 2.092103 TGTGGGTTGGCTAAAGTCTTGT 60.092 45.455 0.00 0.00 0.00 3.16
2082 2639 2.582052 TGTGGGTTGGCTAAAGTCTTG 58.418 47.619 0.00 0.00 0.00 3.02
2083 2640 3.157087 CATGTGGGTTGGCTAAAGTCTT 58.843 45.455 0.00 0.00 0.00 3.01
2084 2641 2.375174 TCATGTGGGTTGGCTAAAGTCT 59.625 45.455 0.00 0.00 0.00 3.24
2085 2642 2.790433 TCATGTGGGTTGGCTAAAGTC 58.210 47.619 0.00 0.00 0.00 3.01
2086 2643 2.969821 TCATGTGGGTTGGCTAAAGT 57.030 45.000 0.00 0.00 0.00 2.66
2087 2644 3.420893 TCTTCATGTGGGTTGGCTAAAG 58.579 45.455 0.00 0.00 0.00 1.85
2088 2645 3.517296 TCTTCATGTGGGTTGGCTAAA 57.483 42.857 0.00 0.00 0.00 1.85
2089 2646 3.517296 TTCTTCATGTGGGTTGGCTAA 57.483 42.857 0.00 0.00 0.00 3.09
2110 2669 1.377725 GTCGGTGAGGTAGACGGGA 60.378 63.158 0.00 0.00 0.00 5.14
2127 2686 5.011738 TCCTTTCCGACTACAATTTCTCTGT 59.988 40.000 0.00 0.00 0.00 3.41
2144 2703 0.039165 CTTTGCAACCGCTCCTTTCC 60.039 55.000 0.00 0.00 39.64 3.13
2186 3989 7.020009 TCCTATATCCCATAATGGTGTGTGTA 58.980 38.462 0.00 0.00 35.17 2.90
2207 4013 3.359695 AGGTTTTTATTGCGGCTCCTA 57.640 42.857 0.00 0.00 0.00 2.94
2209 4015 2.098607 GGTAGGTTTTTATTGCGGCTCC 59.901 50.000 0.00 0.00 0.00 4.70
2215 4021 4.412207 CTCTTGCGGTAGGTTTTTATTGC 58.588 43.478 0.00 0.00 0.00 3.56
2228 4561 2.076863 GTTATGTCTTGCTCTTGCGGT 58.923 47.619 0.00 0.00 43.34 5.68
2240 4574 5.234329 CGTTCTTCAAGTGTGTGTTATGTCT 59.766 40.000 0.00 0.00 0.00 3.41
2253 4587 0.318445 CCGGTCGACGTTCTTCAAGT 60.318 55.000 9.92 0.00 42.24 3.16
2328 4667 3.695830 TCGTTAAGCCTCAGATGGTTT 57.304 42.857 0.00 0.00 34.87 3.27
2329 4668 3.260884 TCTTCGTTAAGCCTCAGATGGTT 59.739 43.478 0.00 0.00 32.36 3.67
2330 4669 2.832129 TCTTCGTTAAGCCTCAGATGGT 59.168 45.455 0.00 0.00 32.36 3.55
2333 4672 2.159028 GCCTCTTCGTTAAGCCTCAGAT 60.159 50.000 0.00 0.00 32.36 2.90
2422 4773 0.114954 ATTGGGCAATGTGAGGGTGT 59.885 50.000 0.00 0.00 0.00 4.16
2427 4778 6.106648 TCTAGATCTATTGGGCAATGTGAG 57.893 41.667 2.11 0.00 32.50 3.51
2434 4785 2.573462 GGGCATCTAGATCTATTGGGCA 59.427 50.000 1.03 0.00 0.00 5.36
2499 4850 1.598130 GCCCTGACAGTGTTCGCTT 60.598 57.895 0.00 0.00 0.00 4.68
2604 4980 2.689646 GAAGGGAGACTCGGTTTCTTG 58.310 52.381 0.00 0.00 0.00 3.02
2605 4981 1.272769 CGAAGGGAGACTCGGTTTCTT 59.727 52.381 0.00 0.00 0.00 2.52
2617 4993 2.093447 AGGCATGTAGAAACGAAGGGAG 60.093 50.000 0.00 0.00 0.00 4.30
2627 5003 2.705658 CCCACCATCTAGGCATGTAGAA 59.294 50.000 0.00 0.00 43.14 2.10
2630 5006 2.438021 GTTCCCACCATCTAGGCATGTA 59.562 50.000 0.00 0.00 43.14 2.29
2631 5007 1.212935 GTTCCCACCATCTAGGCATGT 59.787 52.381 0.00 0.00 43.14 3.21
2685 5062 6.462487 CCTTCTATTTCCTATGTACAAGGCGA 60.462 42.308 15.37 9.11 33.84 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.