Multiple sequence alignment - TraesCS6B01G329900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G329900 chr6B 100.000 5661 0 0 1 5661 579360693 579355033 0.000000e+00 10455
1 TraesCS6B01G329900 chr6B 85.635 362 18 12 5040 5399 579095625 579095296 3.250000e-92 350
2 TraesCS6B01G329900 chr6B 91.597 238 19 1 4594 4831 579101930 579101694 1.520000e-85 327
3 TraesCS6B01G329900 chr6B 91.892 74 6 0 1516 1589 579359088 579359015 2.790000e-18 104
4 TraesCS6B01G329900 chr6B 91.892 74 6 0 1606 1679 579359178 579359105 2.790000e-18 104
5 TraesCS6B01G329900 chr6D 90.820 2233 105 36 746 2908 387888275 387886073 0.000000e+00 2896
6 TraesCS6B01G329900 chr6D 94.727 1593 62 13 3528 5103 387885337 387883750 0.000000e+00 2457
7 TraesCS6B01G329900 chr6D 96.624 622 21 0 2906 3527 387885992 387885371 0.000000e+00 1033
8 TraesCS6B01G329900 chr6A 93.519 1867 98 11 1682 3527 533260018 533258154 0.000000e+00 2756
9 TraesCS6B01G329900 chr6A 90.943 1060 61 19 4333 5375 533257255 533256214 0.000000e+00 1393
10 TraesCS6B01G329900 chr6A 95.721 818 24 4 3527 4336 533258120 533257306 0.000000e+00 1306
11 TraesCS6B01G329900 chr6A 88.704 540 24 13 1129 1640 533260717 533260187 4.820000e-175 625
12 TraesCS6B01G329900 chr6A 87.377 507 39 8 214 708 28771255 28771748 4.950000e-155 558
13 TraesCS6B01G329900 chr6A 88.554 332 10 15 751 1080 533261116 533260811 1.490000e-100 377
14 TraesCS6B01G329900 chr6A 86.364 154 8 5 40 193 28771136 28771276 7.590000e-34 156
15 TraesCS6B01G329900 chr7B 93.075 491 28 4 214 704 17670675 17670191 0.000000e+00 713
16 TraesCS6B01G329900 chr7B 97.409 193 5 0 1 193 17670846 17670654 4.230000e-86 329
17 TraesCS6B01G329900 chr3B 92.668 491 27 4 214 704 766621082 766620601 0.000000e+00 699
18 TraesCS6B01G329900 chr3B 96.891 193 6 0 1 193 766621253 766621061 1.970000e-84 324
19 TraesCS6B01G329900 chr3B 89.362 235 18 5 471 704 30337147 30337375 7.180000e-74 289
20 TraesCS6B01G329900 chr5B 92.245 490 28 5 215 704 220895776 220896255 0.000000e+00 686
21 TraesCS6B01G329900 chr5B 95.855 193 8 0 1 193 220895604 220895796 4.260000e-81 313
22 TraesCS6B01G329900 chr3A 89.817 491 32 6 214 704 719107693 719108165 1.040000e-171 614
23 TraesCS6B01G329900 chr3A 89.516 124 6 2 77 193 719107591 719107714 3.530000e-32 150
24 TraesCS6B01G329900 chr1A 90.578 467 39 1 214 680 590545860 590546321 1.040000e-171 614
25 TraesCS6B01G329900 chr1A 81.942 515 61 16 214 704 115950778 115950272 1.900000e-109 407
26 TraesCS6B01G329900 chr1A 87.931 174 21 0 20 193 115950930 115950757 7.430000e-49 206
27 TraesCS6B01G329900 chr1A 89.313 131 7 2 69 192 590545750 590545880 2.110000e-34 158
28 TraesCS6B01G329900 chr1B 91.693 313 20 4 393 705 8979347 8979653 4.050000e-116 429
29 TraesCS6B01G329900 chr7A 82.136 515 60 16 214 704 40296593 40296087 4.080000e-111 412
30 TraesCS6B01G329900 chr7A 86.782 174 23 0 20 193 40296745 40296572 1.610000e-45 195


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G329900 chr6B 579355033 579360693 5660 True 3554.333333 10455 94.594667 1 5661 3 chr6B.!!$R3 5660
1 TraesCS6B01G329900 chr6D 387883750 387888275 4525 True 2128.666667 2896 94.057000 746 5103 3 chr6D.!!$R1 4357
2 TraesCS6B01G329900 chr6A 533256214 533261116 4902 True 1291.400000 2756 91.488200 751 5375 5 chr6A.!!$R1 4624
3 TraesCS6B01G329900 chr6A 28771136 28771748 612 False 357.000000 558 86.870500 40 708 2 chr6A.!!$F1 668
4 TraesCS6B01G329900 chr7B 17670191 17670846 655 True 521.000000 713 95.242000 1 704 2 chr7B.!!$R1 703
5 TraesCS6B01G329900 chr3B 766620601 766621253 652 True 511.500000 699 94.779500 1 704 2 chr3B.!!$R1 703
6 TraesCS6B01G329900 chr5B 220895604 220896255 651 False 499.500000 686 94.050000 1 704 2 chr5B.!!$F1 703
7 TraesCS6B01G329900 chr3A 719107591 719108165 574 False 382.000000 614 89.666500 77 704 2 chr3A.!!$F1 627
8 TraesCS6B01G329900 chr1A 590545750 590546321 571 False 386.000000 614 89.945500 69 680 2 chr1A.!!$F1 611
9 TraesCS6B01G329900 chr1A 115950272 115950930 658 True 306.500000 407 84.936500 20 704 2 chr1A.!!$R1 684
10 TraesCS6B01G329900 chr7A 40296087 40296745 658 True 303.500000 412 84.459000 20 704 2 chr7A.!!$R1 684

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
167 175 0.027194 CTGATCTTGCAATCGCCACG 59.973 55.000 0.00 0.00 37.32 4.94 F
730 776 0.040067 CTTGGCGAACAACAGGAAGC 60.040 55.000 0.00 0.00 34.76 3.86 F
1225 1327 0.451783 GTTCCTCAATTCGCGCCAAT 59.548 50.000 0.00 0.00 0.00 3.16 F
2398 2673 0.034059 ACTGACAAAGAGGTGGCGAG 59.966 55.000 0.00 0.00 0.00 5.03 F
2592 2867 0.176680 CAGGTCCGGAATCTGTCCTG 59.823 60.000 18.92 18.92 45.36 3.86 F
2603 2878 0.826715 TCTGTCCTGCTCCTGTATGC 59.173 55.000 0.00 0.00 0.00 3.14 F
3416 3811 1.726791 CTGGCAATGACGTGTCAGTAC 59.273 52.381 8.82 0.51 44.55 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1604 1752 1.137086 ACCGCATAGAAGTCGCATTCT 59.863 47.619 7.07 7.07 42.20 2.40 R
2380 2655 0.034059 ACTCGCCACCTCTTTGTCAG 59.966 55.000 0.00 0.00 0.00 3.51 R
2453 2728 0.679002 CTGGCATGTTGGTCAGGGAG 60.679 60.000 0.00 0.00 36.86 4.30 R
3416 3811 0.249911 GGGTTAGTCCATAGGCAGCG 60.250 60.000 0.00 0.00 38.11 5.18 R
4510 5005 2.040947 TCAACACCCACATAAGATGGCA 59.959 45.455 0.00 0.00 35.74 4.92 R
4529 5024 8.171164 AGTTACATATCTGACTCGATGAATCA 57.829 34.615 0.00 0.00 0.00 2.57 R
5020 5516 0.107410 ACTGTCGAAAGCAACACCCA 60.107 50.000 1.37 0.00 0.00 4.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
153 161 6.092259 GGAATATATAAACGCCACACCTGATC 59.908 42.308 0.00 0.00 0.00 2.92
167 175 0.027194 CTGATCTTGCAATCGCCACG 59.973 55.000 0.00 0.00 37.32 4.94
192 200 2.622629 CGAATGGATCGCACGCAG 59.377 61.111 0.00 0.00 45.89 5.18
193 201 2.325857 GAATGGATCGCACGCAGC 59.674 61.111 0.00 0.00 40.87 5.25
213 221 2.622629 CGAATGGATCGCACGCAG 59.377 61.111 0.00 0.00 45.89 5.18
214 222 2.325857 GAATGGATCGCACGCAGC 59.674 61.111 0.00 0.00 40.87 5.25
320 328 1.447643 CCGGGATAAGACTGCAGGG 59.552 63.158 19.93 1.73 0.00 4.45
427 447 2.586079 CGAATGACCGCGCCTCAT 60.586 61.111 0.00 6.10 0.00 2.90
485 529 3.587923 CCGTCATTTCGTAGGTTAACCA 58.412 45.455 26.26 9.82 38.89 3.67
556 600 3.069729 AGGATGGCCGTAGTTGTATCTTC 59.930 47.826 0.00 0.00 39.96 2.87
606 651 2.666098 CGGGGGATCGGTGGAAAGT 61.666 63.158 0.00 0.00 0.00 2.66
618 663 0.477597 TGGAAAGTGGGAGGTGGGAT 60.478 55.000 0.00 0.00 0.00 3.85
649 695 2.858787 AAAAACCAGGGAAAGTGGGA 57.141 45.000 0.00 0.00 39.65 4.37
650 696 2.082140 AAAACCAGGGAAAGTGGGAC 57.918 50.000 0.00 0.00 39.65 4.46
651 697 0.179001 AAACCAGGGAAAGTGGGACG 60.179 55.000 0.00 0.00 39.65 4.79
652 698 1.057851 AACCAGGGAAAGTGGGACGA 61.058 55.000 0.00 0.00 39.65 4.20
653 699 1.057851 ACCAGGGAAAGTGGGACGAA 61.058 55.000 0.00 0.00 39.65 3.85
654 700 0.109723 CCAGGGAAAGTGGGACGAAA 59.890 55.000 0.00 0.00 0.00 3.46
655 701 1.477923 CCAGGGAAAGTGGGACGAAAA 60.478 52.381 0.00 0.00 0.00 2.29
656 702 2.514803 CAGGGAAAGTGGGACGAAAAT 58.485 47.619 0.00 0.00 0.00 1.82
657 703 2.890945 CAGGGAAAGTGGGACGAAAATT 59.109 45.455 0.00 0.00 0.00 1.82
658 704 2.890945 AGGGAAAGTGGGACGAAAATTG 59.109 45.455 0.00 0.00 0.00 2.32
659 705 2.888414 GGGAAAGTGGGACGAAAATTGA 59.112 45.455 0.00 0.00 0.00 2.57
660 706 3.305131 GGGAAAGTGGGACGAAAATTGAC 60.305 47.826 0.00 0.00 0.00 3.18
661 707 3.568430 GGAAAGTGGGACGAAAATTGACT 59.432 43.478 0.00 0.00 0.00 3.41
662 708 4.537015 GAAAGTGGGACGAAAATTGACTG 58.463 43.478 0.00 0.00 0.00 3.51
663 709 3.485463 AGTGGGACGAAAATTGACTGA 57.515 42.857 0.00 0.00 0.00 3.41
664 710 3.139077 AGTGGGACGAAAATTGACTGAC 58.861 45.455 0.00 0.00 0.00 3.51
665 711 2.096417 GTGGGACGAAAATTGACTGACG 60.096 50.000 0.00 0.00 0.00 4.35
666 712 1.463444 GGGACGAAAATTGACTGACGG 59.537 52.381 0.00 0.00 0.00 4.79
667 713 2.409975 GGACGAAAATTGACTGACGGA 58.590 47.619 0.00 0.00 0.00 4.69
668 714 2.412089 GGACGAAAATTGACTGACGGAG 59.588 50.000 0.00 0.00 0.00 4.63
669 715 3.314553 GACGAAAATTGACTGACGGAGA 58.685 45.455 0.00 0.00 0.00 3.71
670 716 3.057734 ACGAAAATTGACTGACGGAGAC 58.942 45.455 0.00 0.00 0.00 3.36
671 717 3.243771 ACGAAAATTGACTGACGGAGACT 60.244 43.478 0.00 0.00 0.00 3.24
672 718 4.022589 ACGAAAATTGACTGACGGAGACTA 60.023 41.667 0.00 0.00 0.00 2.59
673 719 5.103000 CGAAAATTGACTGACGGAGACTAT 58.897 41.667 0.00 0.00 0.00 2.12
674 720 5.230306 CGAAAATTGACTGACGGAGACTATC 59.770 44.000 0.00 0.00 0.00 2.08
675 721 5.661056 AAATTGACTGACGGAGACTATCA 57.339 39.130 0.00 0.00 0.00 2.15
676 722 5.661056 AATTGACTGACGGAGACTATCAA 57.339 39.130 0.00 0.00 33.64 2.57
677 723 4.436242 TTGACTGACGGAGACTATCAAC 57.564 45.455 0.00 0.00 0.00 3.18
678 724 3.687125 TGACTGACGGAGACTATCAACT 58.313 45.455 0.00 0.00 0.00 3.16
679 725 3.440522 TGACTGACGGAGACTATCAACTG 59.559 47.826 0.00 0.00 0.00 3.16
680 726 3.687125 ACTGACGGAGACTATCAACTGA 58.313 45.455 0.00 0.00 0.00 3.41
681 727 3.692101 ACTGACGGAGACTATCAACTGAG 59.308 47.826 0.00 0.00 0.00 3.35
682 728 3.942115 CTGACGGAGACTATCAACTGAGA 59.058 47.826 0.00 0.00 0.00 3.27
683 729 3.690139 TGACGGAGACTATCAACTGAGAC 59.310 47.826 0.00 0.00 0.00 3.36
684 730 3.687125 ACGGAGACTATCAACTGAGACA 58.313 45.455 0.00 0.00 0.00 3.41
685 731 4.274147 ACGGAGACTATCAACTGAGACAT 58.726 43.478 0.00 0.00 0.00 3.06
686 732 4.707448 ACGGAGACTATCAACTGAGACATT 59.293 41.667 0.00 0.00 0.00 2.71
687 733 5.886474 ACGGAGACTATCAACTGAGACATTA 59.114 40.000 0.00 0.00 0.00 1.90
688 734 6.183360 ACGGAGACTATCAACTGAGACATTAC 60.183 42.308 0.00 0.00 0.00 1.89
689 735 6.183360 CGGAGACTATCAACTGAGACATTACA 60.183 42.308 0.00 0.00 0.00 2.41
690 736 7.469318 CGGAGACTATCAACTGAGACATTACAT 60.469 40.741 0.00 0.00 0.00 2.29
691 737 8.200792 GGAGACTATCAACTGAGACATTACATT 58.799 37.037 0.00 0.00 0.00 2.71
694 740 9.469807 GACTATCAACTGAGACATTACATTAGG 57.530 37.037 0.00 0.00 0.00 2.69
695 741 9.201989 ACTATCAACTGAGACATTACATTAGGA 57.798 33.333 0.00 0.00 0.00 2.94
696 742 9.689976 CTATCAACTGAGACATTACATTAGGAG 57.310 37.037 0.00 0.00 0.00 3.69
697 743 7.482169 TCAACTGAGACATTACATTAGGAGT 57.518 36.000 0.00 0.00 0.00 3.85
698 744 8.589701 TCAACTGAGACATTACATTAGGAGTA 57.410 34.615 0.00 0.00 0.00 2.59
699 745 8.687242 TCAACTGAGACATTACATTAGGAGTAG 58.313 37.037 0.00 0.00 0.00 2.57
700 746 8.687242 CAACTGAGACATTACATTAGGAGTAGA 58.313 37.037 0.00 0.00 0.00 2.59
701 747 8.458573 ACTGAGACATTACATTAGGAGTAGAG 57.541 38.462 0.00 0.00 0.00 2.43
702 748 8.275758 ACTGAGACATTACATTAGGAGTAGAGA 58.724 37.037 0.00 0.00 0.00 3.10
703 749 9.295825 CTGAGACATTACATTAGGAGTAGAGAT 57.704 37.037 0.00 0.00 0.00 2.75
704 750 9.647918 TGAGACATTACATTAGGAGTAGAGATT 57.352 33.333 0.00 0.00 0.00 2.40
715 761 9.898152 ATTAGGAGTAGAGATTTTTCTTCTTGG 57.102 33.333 0.00 0.00 0.00 3.61
716 762 6.176896 AGGAGTAGAGATTTTTCTTCTTGGC 58.823 40.000 0.00 0.00 0.00 4.52
717 763 5.064071 GGAGTAGAGATTTTTCTTCTTGGCG 59.936 44.000 0.00 0.00 0.00 5.69
718 764 5.794894 AGTAGAGATTTTTCTTCTTGGCGA 58.205 37.500 0.00 0.00 0.00 5.54
719 765 6.231211 AGTAGAGATTTTTCTTCTTGGCGAA 58.769 36.000 0.00 0.00 0.00 4.70
720 766 5.363979 AGAGATTTTTCTTCTTGGCGAAC 57.636 39.130 0.00 0.00 0.00 3.95
721 767 4.821805 AGAGATTTTTCTTCTTGGCGAACA 59.178 37.500 0.00 0.00 0.00 3.18
722 768 5.299279 AGAGATTTTTCTTCTTGGCGAACAA 59.701 36.000 0.00 0.00 37.55 2.83
723 769 5.281727 AGATTTTTCTTCTTGGCGAACAAC 58.718 37.500 0.00 0.00 34.76 3.32
724 770 4.442375 TTTTTCTTCTTGGCGAACAACA 57.558 36.364 0.00 0.00 34.76 3.33
725 771 3.691049 TTTCTTCTTGGCGAACAACAG 57.309 42.857 0.00 0.00 34.76 3.16
726 772 1.593196 TCTTCTTGGCGAACAACAGG 58.407 50.000 0.00 0.00 34.76 4.00
727 773 1.140052 TCTTCTTGGCGAACAACAGGA 59.860 47.619 0.00 0.00 34.76 3.86
728 774 1.946768 CTTCTTGGCGAACAACAGGAA 59.053 47.619 0.00 0.00 34.76 3.36
729 775 1.593196 TCTTGGCGAACAACAGGAAG 58.407 50.000 0.00 0.00 34.76 3.46
730 776 0.040067 CTTGGCGAACAACAGGAAGC 60.040 55.000 0.00 0.00 34.76 3.86
731 777 0.465460 TTGGCGAACAACAGGAAGCT 60.465 50.000 0.00 0.00 33.18 3.74
732 778 0.884704 TGGCGAACAACAGGAAGCTC 60.885 55.000 0.00 0.00 0.00 4.09
733 779 0.603975 GGCGAACAACAGGAAGCTCT 60.604 55.000 0.00 0.00 0.00 4.09
734 780 1.337823 GGCGAACAACAGGAAGCTCTA 60.338 52.381 0.00 0.00 0.00 2.43
735 781 2.622436 GCGAACAACAGGAAGCTCTAT 58.378 47.619 0.00 0.00 0.00 1.98
736 782 2.605366 GCGAACAACAGGAAGCTCTATC 59.395 50.000 0.00 0.00 0.00 2.08
737 783 3.190874 CGAACAACAGGAAGCTCTATCC 58.809 50.000 0.00 0.00 37.22 2.59
742 788 3.642977 AGGAAGCTCTATCCTGCCA 57.357 52.632 4.57 0.00 45.60 4.92
743 789 1.885049 AGGAAGCTCTATCCTGCCAA 58.115 50.000 4.57 0.00 45.60 4.52
744 790 2.200081 AGGAAGCTCTATCCTGCCAAA 58.800 47.619 4.57 0.00 45.60 3.28
864 918 4.779966 TCTCTCTCGCCGGCGTCT 62.780 66.667 44.16 0.00 40.74 4.18
901 955 4.340620 GGGTAGAGCACGAGTCCT 57.659 61.111 0.00 0.00 0.00 3.85
902 956 2.108568 GGGTAGAGCACGAGTCCTC 58.891 63.158 0.00 0.00 0.00 3.71
903 957 1.385756 GGGTAGAGCACGAGTCCTCC 61.386 65.000 0.00 0.00 0.00 4.30
904 958 1.716826 GGTAGAGCACGAGTCCTCCG 61.717 65.000 0.00 0.00 0.00 4.63
905 959 0.743701 GTAGAGCACGAGTCCTCCGA 60.744 60.000 0.00 0.00 0.00 4.55
906 960 0.462225 TAGAGCACGAGTCCTCCGAG 60.462 60.000 0.00 0.00 0.00 4.63
907 961 1.745864 GAGCACGAGTCCTCCGAGA 60.746 63.158 0.00 0.00 0.00 4.04
931 985 2.440247 CGAATCCCCAACCCAGGC 60.440 66.667 0.00 0.00 0.00 4.85
932 986 2.770130 GAATCCCCAACCCAGGCA 59.230 61.111 0.00 0.00 0.00 4.75
1023 1078 2.043248 TACCTGCCGTCCTCCCTC 60.043 66.667 0.00 0.00 0.00 4.30
1161 1262 2.344203 CCTCTCCGCGTCCTCTTGT 61.344 63.158 4.92 0.00 0.00 3.16
1169 1270 0.528470 GCGTCCTCTTGTGCTAGACT 59.472 55.000 0.00 0.00 0.00 3.24
1225 1327 0.451783 GTTCCTCAATTCGCGCCAAT 59.548 50.000 0.00 0.00 0.00 3.16
1247 1349 2.764128 GGGTGATCCGGCCTCTGA 60.764 66.667 0.00 0.00 33.83 3.27
1345 1447 2.825836 GATGCTTCCGCTGGTGGG 60.826 66.667 0.07 0.00 36.97 4.61
1346 1448 3.628646 GATGCTTCCGCTGGTGGGT 62.629 63.158 0.07 0.00 36.97 4.51
1347 1449 3.210012 ATGCTTCCGCTGGTGGGTT 62.210 57.895 0.07 0.00 36.97 4.11
1348 1450 1.847798 ATGCTTCCGCTGGTGGGTTA 61.848 55.000 0.07 0.00 36.97 2.85
1349 1451 2.038837 GCTTCCGCTGGTGGGTTAC 61.039 63.158 0.07 0.00 0.00 2.50
1350 1452 1.373435 CTTCCGCTGGTGGGTTACA 59.627 57.895 0.07 0.00 0.00 2.41
1392 1513 5.341169 GGAGATTCCCAAGGATAGAGAGAT 58.659 45.833 0.00 0.00 0.00 2.75
1393 1514 6.498538 GGAGATTCCCAAGGATAGAGAGATA 58.501 44.000 0.00 0.00 0.00 1.98
1414 1535 1.581447 GCTTTTGCCGTCCTCTTGG 59.419 57.895 0.00 0.00 40.15 3.61
1467 1589 3.057736 CACAAGGAAGCAGGTTGATCTTG 60.058 47.826 13.69 13.69 36.96 3.02
1490 1612 4.227538 CAGTGTCGACTGTTAACTAGTGG 58.772 47.826 17.92 12.20 44.15 4.00
1521 1668 3.159472 AGACATTTTCTGCTGGAATGCA 58.841 40.909 15.35 0.00 41.05 3.96
1563 1711 7.362802 ACTGTTAACTCCAGAAGAAGTTAGT 57.637 36.000 7.22 0.00 34.04 2.24
1594 1742 7.134362 AGGATGTGTGATGATACTTCTGATT 57.866 36.000 0.00 0.00 0.00 2.57
1604 1752 8.038351 TGATGATACTTCTGATTGTTCCGTTAA 58.962 33.333 0.00 0.00 0.00 2.01
1640 1788 3.997762 TGCGGTGTTGACTGTTAACTAT 58.002 40.909 15.22 0.00 0.00 2.12
1641 1789 3.743911 TGCGGTGTTGACTGTTAACTATG 59.256 43.478 15.22 6.92 0.00 2.23
1652 1854 9.706691 TTGACTGTTAACTATGGAAGAAGTTAG 57.293 33.333 7.22 0.00 38.89 2.34
1677 1879 8.543774 AGTTTCTTTAGGATGTGTGATGATACT 58.456 33.333 0.00 0.00 0.00 2.12
1699 1974 3.039670 GCAGCTGCAATACTAACGTTC 57.960 47.619 33.36 0.00 41.59 3.95
1706 1981 0.636733 AATACTAACGTTCGCGCACG 59.363 50.000 28.64 28.64 46.04 5.34
1736 2011 6.596497 TGTTTTTACTAGCAGTATAGCAACCC 59.404 38.462 0.00 0.00 36.85 4.11
1737 2012 4.579454 TTACTAGCAGTATAGCAACCCG 57.421 45.455 0.00 0.00 36.85 5.28
1739 2014 2.361438 ACTAGCAGTATAGCAACCCGTC 59.639 50.000 0.00 0.00 36.85 4.79
1740 2015 1.486211 AGCAGTATAGCAACCCGTCT 58.514 50.000 0.00 0.00 36.85 4.18
1741 2016 1.409427 AGCAGTATAGCAACCCGTCTC 59.591 52.381 0.00 0.00 36.85 3.36
1742 2017 1.409427 GCAGTATAGCAACCCGTCTCT 59.591 52.381 0.00 0.00 0.00 3.10
1743 2018 2.544069 GCAGTATAGCAACCCGTCTCTC 60.544 54.545 0.00 0.00 0.00 3.20
1744 2019 2.688446 CAGTATAGCAACCCGTCTCTCA 59.312 50.000 0.00 0.00 0.00 3.27
1748 2023 2.568623 AGCAACCCGTCTCTCATTTT 57.431 45.000 0.00 0.00 0.00 1.82
1753 2028 5.476945 AGCAACCCGTCTCTCATTTTAAAAT 59.523 36.000 7.64 7.64 0.00 1.82
1954 2229 5.140177 CGTTTGTTAGCTGTAAGAAGCAAG 58.860 41.667 0.00 0.00 46.08 4.01
1988 2263 6.376018 ACATGTGATGTTCATGATGTGATTCA 59.624 34.615 11.92 0.00 41.63 2.57
2231 2506 2.243810 GAGATAATCCCCGAGCAGAGT 58.756 52.381 0.00 0.00 0.00 3.24
2369 2644 2.781646 GAGCGGTTTCAAACAAAACTCG 59.218 45.455 1.93 0.00 38.81 4.18
2380 2655 6.324042 TCAAACAAAACTCGGAACCTAAAAC 58.676 36.000 0.00 0.00 0.00 2.43
2395 2670 3.253432 CCTAAAACTGACAAAGAGGTGGC 59.747 47.826 0.00 0.00 0.00 5.01
2396 2671 1.308998 AAACTGACAAAGAGGTGGCG 58.691 50.000 0.00 0.00 0.00 5.69
2398 2673 0.034059 ACTGACAAAGAGGTGGCGAG 59.966 55.000 0.00 0.00 0.00 5.03
2453 2728 5.617087 GCTCGAAGGACCAAATGAAGTTAAC 60.617 44.000 0.00 0.00 0.00 2.01
2579 2854 3.279434 CTGGGTTTTGCTATACAGGTCC 58.721 50.000 0.00 0.00 0.00 4.46
2592 2867 0.176680 CAGGTCCGGAATCTGTCCTG 59.823 60.000 18.92 18.92 45.36 3.86
2603 2878 0.826715 TCTGTCCTGCTCCTGTATGC 59.173 55.000 0.00 0.00 0.00 3.14
2629 2904 4.045104 GGTTGCACATATCGACTACTCTG 58.955 47.826 0.00 0.00 0.00 3.35
2663 2938 4.688879 AGATTCACAATTTTGCAGCACATG 59.311 37.500 0.00 0.00 0.00 3.21
2682 2957 4.831155 ACATGGAGGCATGGAATATCTTTG 59.169 41.667 0.00 0.00 36.91 2.77
2747 3054 4.340950 ACTCCTGGTATGTTTTGTTTGGTG 59.659 41.667 0.00 0.00 0.00 4.17
2791 3098 4.699925 AAGAAAGTAGCCAACTGTACCA 57.300 40.909 0.00 0.00 38.88 3.25
2802 3109 9.550406 GTAGCCAACTGTACCAATATTATGTAA 57.450 33.333 0.00 0.00 0.00 2.41
2828 3135 4.158579 CCAAAGAGTAATTCTTCCTTGGGC 59.841 45.833 9.89 0.00 45.41 5.36
2897 3206 8.277713 TCTTACGTAAACACTTATTTTGCTGTC 58.722 33.333 9.68 0.00 0.00 3.51
2977 3369 3.327404 GGGACAGAAAGGGGGCGA 61.327 66.667 0.00 0.00 0.00 5.54
3038 3430 4.074970 AGCACAAAGAAGTATCAGGTTGG 58.925 43.478 0.00 0.00 0.00 3.77
3081 3473 4.466370 TGTCACCTATTCACCTTCTACTGG 59.534 45.833 0.00 0.00 0.00 4.00
3186 3578 5.243060 GGCCAACAGGTAATTTGTACTTCTT 59.757 40.000 0.00 0.00 0.00 2.52
3392 3787 8.373048 TGTAATGAAAATAGGCGTATAGGTTG 57.627 34.615 0.00 0.00 0.00 3.77
3416 3811 1.726791 CTGGCAATGACGTGTCAGTAC 59.273 52.381 8.82 0.51 44.55 2.73
3483 3878 2.421952 GCTACAATCCTGCATCAAGGGA 60.422 50.000 0.00 0.00 37.96 4.20
3496 3891 5.191722 TGCATCAAGGGATTAAGTAGACCTT 59.808 40.000 0.00 0.00 41.97 3.50
3558 3986 9.981460 AGAAAAGTGACATTTCCCTATATTCTT 57.019 29.630 9.39 0.00 37.47 2.52
3666 4095 5.942236 AGCAATTACTTGATCTCAAAGCAGA 59.058 36.000 0.00 0.00 35.15 4.26
3668 4097 6.691818 GCAATTACTTGATCTCAAAGCAGATG 59.308 38.462 0.00 0.00 32.94 2.90
3732 4161 7.385778 TCTGTTAACATACTAAATGGTTGCC 57.614 36.000 9.13 0.00 0.00 4.52
3734 4163 8.322828 TCTGTTAACATACTAAATGGTTGCCTA 58.677 33.333 9.13 0.00 0.00 3.93
3846 4275 2.196595 CCTGTAATCCCTCCCACAAGA 58.803 52.381 0.00 0.00 0.00 3.02
3860 4289 5.869579 TCCCACAAGATTCTAAGCATATCC 58.130 41.667 0.00 0.00 0.00 2.59
4050 4486 9.439500 AGGTACTTACAATAACGAAGCATTTTA 57.561 29.630 0.00 0.00 27.25 1.52
4069 4505 6.362737 TTTTATTTTATCTCCCCATCCCCA 57.637 37.500 0.00 0.00 0.00 4.96
4099 4535 6.274579 CAAATGCAATTACATCCATACTGCA 58.725 36.000 0.00 0.00 42.02 4.41
4275 4711 3.084070 GCAACTGCTATATTGCCCAAC 57.916 47.619 6.69 0.00 44.42 3.77
4276 4712 2.689983 GCAACTGCTATATTGCCCAACT 59.310 45.455 6.69 0.00 44.42 3.16
4278 4714 2.936202 ACTGCTATATTGCCCAACTGG 58.064 47.619 6.69 0.00 37.09 4.00
4279 4715 2.509548 ACTGCTATATTGCCCAACTGGA 59.490 45.455 6.69 0.00 37.39 3.86
4392 4887 5.532406 CACTTAAGCATATGCACCCTACATT 59.468 40.000 28.62 14.01 45.16 2.71
4492 4987 2.298163 AGCATCTTGAGCAAACCAAAGG 59.702 45.455 0.00 0.00 0.00 3.11
4529 5024 2.897271 TGCCATCTTATGTGGGTGTT 57.103 45.000 0.00 0.00 37.22 3.32
4541 5036 2.038426 TGTGGGTGTTGATTCATCGAGT 59.962 45.455 0.00 0.00 0.00 4.18
4708 5204 4.813027 TCTGTACAGTTTTTAGTAGGCGG 58.187 43.478 21.99 0.00 0.00 6.13
4717 5213 0.383231 TTAGTAGGCGGCGCTAGAAC 59.617 55.000 32.30 22.14 0.00 3.01
4748 5244 4.227300 TGCAGGACCATGGTAGAAGTATTT 59.773 41.667 19.80 0.00 0.00 1.40
4749 5245 4.816925 GCAGGACCATGGTAGAAGTATTTC 59.183 45.833 19.80 0.24 0.00 2.17
4750 5246 5.050490 CAGGACCATGGTAGAAGTATTTCG 58.950 45.833 19.80 0.00 38.38 3.46
4751 5247 4.101119 AGGACCATGGTAGAAGTATTTCGG 59.899 45.833 19.80 0.00 38.38 4.30
4782 5278 1.767289 TGTCTTGTCGAGCGAGTTTC 58.233 50.000 0.00 0.00 0.00 2.78
4785 5281 2.095364 GTCTTGTCGAGCGAGTTTCCTA 60.095 50.000 0.00 0.00 0.00 2.94
4820 5316 8.687824 AATTCTGTAATTTTCTTGTTATGCCG 57.312 30.769 0.00 0.00 30.98 5.69
4895 5391 6.527023 GCATCATTCTCATGTCTTCACAAAAG 59.473 38.462 0.00 0.00 35.64 2.27
4914 5410 1.918262 AGTGAGGCTGATTCATGGGAA 59.082 47.619 0.00 0.00 37.45 3.97
4918 5414 3.718434 TGAGGCTGATTCATGGGAATACT 59.282 43.478 0.00 0.00 43.69 2.12
5013 5509 1.088340 CCTCATGTGGCAGAAGCTCG 61.088 60.000 0.00 0.00 41.70 5.03
5015 5511 0.671472 TCATGTGGCAGAAGCTCGTG 60.671 55.000 0.00 0.00 41.70 4.35
5020 5516 1.065551 GTGGCAGAAGCTCGTGTTTTT 59.934 47.619 0.00 0.00 41.70 1.94
5043 5539 2.870411 GGTGTTGCTTTCGACAGTAAGT 59.130 45.455 2.11 0.00 37.28 2.24
5045 5541 3.802685 GTGTTGCTTTCGACAGTAAGTCT 59.197 43.478 2.11 0.00 45.32 3.24
5072 5575 4.075963 CCAATAGGCATTTTGGATTGGG 57.924 45.455 14.45 0.00 44.23 4.12
5078 5581 1.758862 GCATTTTGGATTGGGAGAGGG 59.241 52.381 0.00 0.00 0.00 4.30
5142 5650 5.350365 GTGATCACCACATTTCGTAGCTAAA 59.650 40.000 15.31 0.00 45.03 1.85
5152 5661 3.482722 TCGTAGCTAAACAAGGTCTCG 57.517 47.619 0.00 0.00 37.13 4.04
5169 5678 2.047179 GTGTCTCCGAGCCAACCC 60.047 66.667 0.00 0.00 0.00 4.11
5171 5680 1.918293 TGTCTCCGAGCCAACCCAT 60.918 57.895 0.00 0.00 0.00 4.00
5191 5700 3.961480 TGCTTTCTCGAAGAATCCTGA 57.039 42.857 0.00 0.00 37.57 3.86
5202 5711 2.383855 AGAATCCTGAACCGAGGAGAG 58.616 52.381 0.00 0.00 45.60 3.20
5225 5734 2.192443 CAGCCTGGAGCCTCATGG 59.808 66.667 0.00 0.00 45.47 3.66
5226 5735 3.095163 AGCCTGGAGCCTCATGGG 61.095 66.667 0.00 0.00 45.47 4.00
5303 5820 2.507407 TGGAAGGAAGAAAATCCCGG 57.493 50.000 0.00 0.00 40.59 5.73
5305 5822 1.103803 GAAGGAAGAAAATCCCGGCC 58.896 55.000 0.00 0.00 40.59 6.13
5307 5824 0.704664 AGGAAGAAAATCCCGGCCTT 59.295 50.000 0.00 0.00 40.59 4.35
5308 5825 1.077169 AGGAAGAAAATCCCGGCCTTT 59.923 47.619 0.00 0.00 40.59 3.11
5309 5826 2.310647 AGGAAGAAAATCCCGGCCTTTA 59.689 45.455 0.00 0.00 40.59 1.85
5310 5827 2.688446 GGAAGAAAATCCCGGCCTTTAG 59.312 50.000 0.00 0.00 33.05 1.85
5311 5828 1.763968 AGAAAATCCCGGCCTTTAGC 58.236 50.000 0.00 0.00 42.60 3.09
5313 5830 2.031870 GAAAATCCCGGCCTTTAGCAT 58.968 47.619 0.00 0.00 46.50 3.79
5316 5833 0.179018 ATCCCGGCCTTTAGCATGAC 60.179 55.000 0.00 0.00 46.50 3.06
5317 5834 1.823899 CCCGGCCTTTAGCATGACC 60.824 63.158 0.00 0.00 46.50 4.02
5318 5835 1.224592 CCGGCCTTTAGCATGACCT 59.775 57.895 0.00 0.00 46.50 3.85
5320 5837 1.541233 CCGGCCTTTAGCATGACCTAG 60.541 57.143 0.00 0.00 46.50 3.02
5321 5838 1.412710 CGGCCTTTAGCATGACCTAGA 59.587 52.381 0.00 0.00 46.50 2.43
5322 5839 2.546795 CGGCCTTTAGCATGACCTAGAG 60.547 54.545 0.00 0.00 46.50 2.43
5323 5840 2.224402 GGCCTTTAGCATGACCTAGAGG 60.224 54.545 10.76 10.76 46.50 3.69
5339 5856 4.994852 CCTAGAGGTCACGAAACATGAAAA 59.005 41.667 0.00 0.00 0.00 2.29
5341 5858 6.149474 CCTAGAGGTCACGAAACATGAAAATT 59.851 38.462 0.00 0.00 0.00 1.82
5346 5863 5.402270 GGTCACGAAACATGAAAATTCCTTG 59.598 40.000 0.00 0.00 0.00 3.61
5375 5892 3.403228 AAAATGGTGGACTATGCCCAT 57.597 42.857 0.00 0.00 39.34 4.00
5376 5893 2.369983 AATGGTGGACTATGCCCATG 57.630 50.000 0.00 0.00 37.74 3.66
5377 5894 1.521764 ATGGTGGACTATGCCCATGA 58.478 50.000 0.00 0.00 36.36 3.07
5378 5895 1.294041 TGGTGGACTATGCCCATGAA 58.706 50.000 0.00 0.00 35.91 2.57
5379 5896 1.638070 TGGTGGACTATGCCCATGAAA 59.362 47.619 0.00 0.00 35.91 2.69
5380 5897 2.042297 TGGTGGACTATGCCCATGAAAA 59.958 45.455 0.00 0.00 35.91 2.29
5381 5898 2.427095 GGTGGACTATGCCCATGAAAAC 59.573 50.000 0.00 0.00 35.91 2.43
5382 5899 3.356290 GTGGACTATGCCCATGAAAACT 58.644 45.455 0.00 0.00 35.91 2.66
5383 5900 3.763897 GTGGACTATGCCCATGAAAACTT 59.236 43.478 0.00 0.00 35.91 2.66
5384 5901 4.016444 TGGACTATGCCCATGAAAACTTC 58.984 43.478 0.00 0.00 0.00 3.01
5385 5902 3.381590 GGACTATGCCCATGAAAACTTCC 59.618 47.826 0.00 0.00 0.00 3.46
5386 5903 4.016444 GACTATGCCCATGAAAACTTCCA 58.984 43.478 0.00 0.00 0.00 3.53
5387 5904 4.415596 ACTATGCCCATGAAAACTTCCAA 58.584 39.130 0.00 0.00 0.00 3.53
5388 5905 4.837860 ACTATGCCCATGAAAACTTCCAAA 59.162 37.500 0.00 0.00 0.00 3.28
5389 5906 4.703379 ATGCCCATGAAAACTTCCAAAA 57.297 36.364 0.00 0.00 0.00 2.44
5390 5907 4.703379 TGCCCATGAAAACTTCCAAAAT 57.297 36.364 0.00 0.00 0.00 1.82
5391 5908 4.387598 TGCCCATGAAAACTTCCAAAATG 58.612 39.130 0.00 0.00 0.00 2.32
5392 5909 4.102210 TGCCCATGAAAACTTCCAAAATGA 59.898 37.500 0.00 0.00 0.00 2.57
5393 5910 4.452114 GCCCATGAAAACTTCCAAAATGAC 59.548 41.667 0.00 0.00 0.00 3.06
5394 5911 4.685628 CCCATGAAAACTTCCAAAATGACG 59.314 41.667 0.00 0.00 0.00 4.35
5395 5912 5.508825 CCCATGAAAACTTCCAAAATGACGA 60.509 40.000 0.00 0.00 0.00 4.20
5396 5913 5.402270 CCATGAAAACTTCCAAAATGACGAC 59.598 40.000 0.00 0.00 0.00 4.34
5397 5914 5.568685 TGAAAACTTCCAAAATGACGACA 57.431 34.783 0.00 0.00 0.00 4.35
5398 5915 6.142818 TGAAAACTTCCAAAATGACGACAT 57.857 33.333 0.00 0.00 38.50 3.06
5399 5916 7.265647 TGAAAACTTCCAAAATGACGACATA 57.734 32.000 0.00 0.00 35.50 2.29
5400 5917 7.881142 TGAAAACTTCCAAAATGACGACATAT 58.119 30.769 0.00 0.00 35.50 1.78
5401 5918 9.004717 TGAAAACTTCCAAAATGACGACATATA 57.995 29.630 0.00 0.00 35.50 0.86
5451 5968 7.479352 TTTTGCCTCATTCATTAATCAAGGA 57.521 32.000 2.92 0.00 31.03 3.36
5452 5969 6.704289 TTGCCTCATTCATTAATCAAGGAG 57.296 37.500 6.75 6.75 31.03 3.69
5453 5970 5.759059 TGCCTCATTCATTAATCAAGGAGT 58.241 37.500 11.91 0.00 31.03 3.85
5454 5971 6.189859 TGCCTCATTCATTAATCAAGGAGTT 58.810 36.000 11.91 0.00 31.03 3.01
5455 5972 7.345691 TGCCTCATTCATTAATCAAGGAGTTA 58.654 34.615 11.91 0.00 31.03 2.24
5456 5973 7.500227 TGCCTCATTCATTAATCAAGGAGTTAG 59.500 37.037 11.91 0.00 31.03 2.34
5457 5974 7.716998 GCCTCATTCATTAATCAAGGAGTTAGA 59.283 37.037 11.91 0.00 31.03 2.10
5458 5975 9.618890 CCTCATTCATTAATCAAGGAGTTAGAA 57.381 33.333 11.91 0.00 31.03 2.10
5460 5977 9.958180 TCATTCATTAATCAAGGAGTTAGAACA 57.042 29.630 0.00 0.00 0.00 3.18
5471 5988 9.621629 TCAAGGAGTTAGAACAAGATTTTAACA 57.378 29.630 0.00 0.00 0.00 2.41
5481 5998 9.520204 AGAACAAGATTTTAACAAAGTGACATG 57.480 29.630 0.00 0.00 0.00 3.21
5482 5999 7.698836 ACAAGATTTTAACAAAGTGACATGC 57.301 32.000 0.00 0.00 0.00 4.06
5483 6000 7.491682 ACAAGATTTTAACAAAGTGACATGCT 58.508 30.769 0.00 0.00 0.00 3.79
5484 6001 7.981225 ACAAGATTTTAACAAAGTGACATGCTT 59.019 29.630 0.00 0.00 0.00 3.91
5485 6002 8.482429 CAAGATTTTAACAAAGTGACATGCTTC 58.518 33.333 0.00 0.00 0.00 3.86
5486 6003 7.147976 AGATTTTAACAAAGTGACATGCTTCC 58.852 34.615 0.00 0.00 0.00 3.46
5487 6004 4.846779 TTAACAAAGTGACATGCTTCCC 57.153 40.909 0.00 0.00 0.00 3.97
5488 6005 2.363306 ACAAAGTGACATGCTTCCCA 57.637 45.000 0.00 0.00 0.00 4.37
5489 6006 1.956477 ACAAAGTGACATGCTTCCCAC 59.044 47.619 0.00 0.00 0.00 4.61
5490 6007 1.955778 CAAAGTGACATGCTTCCCACA 59.044 47.619 0.00 0.00 32.35 4.17
5491 6008 2.361757 CAAAGTGACATGCTTCCCACAA 59.638 45.455 0.00 0.00 32.35 3.33
5492 6009 2.363306 AGTGACATGCTTCCCACAAA 57.637 45.000 0.00 0.00 32.35 2.83
5493 6010 2.665165 AGTGACATGCTTCCCACAAAA 58.335 42.857 0.00 0.00 32.35 2.44
5494 6011 2.624838 AGTGACATGCTTCCCACAAAAG 59.375 45.455 0.00 0.00 32.35 2.27
5495 6012 1.962807 TGACATGCTTCCCACAAAAGG 59.037 47.619 0.00 0.00 0.00 3.11
5513 6030 2.983592 GGAACCACCCCAAGCACG 60.984 66.667 0.00 0.00 0.00 5.34
5514 6031 2.983592 GAACCACCCCAAGCACGG 60.984 66.667 0.00 0.00 0.00 4.94
5515 6032 4.596585 AACCACCCCAAGCACGGG 62.597 66.667 3.43 3.43 46.94 5.28
5527 6044 4.767255 CACGGGCCACTGCTCTCC 62.767 72.222 4.39 0.00 35.06 3.71
5533 6050 4.020617 CCACTGCTCTCCCGGCAA 62.021 66.667 0.00 0.00 39.30 4.52
5534 6051 2.032528 CACTGCTCTCCCGGCAAA 59.967 61.111 0.00 0.00 39.30 3.68
5535 6052 1.600636 CACTGCTCTCCCGGCAAAA 60.601 57.895 0.00 0.00 39.30 2.44
5536 6053 0.962356 CACTGCTCTCCCGGCAAAAT 60.962 55.000 0.00 0.00 39.30 1.82
5537 6054 0.251341 ACTGCTCTCCCGGCAAAATT 60.251 50.000 0.00 0.00 39.30 1.82
5538 6055 1.004277 ACTGCTCTCCCGGCAAAATTA 59.996 47.619 0.00 0.00 39.30 1.40
5539 6056 2.301346 CTGCTCTCCCGGCAAAATTAT 58.699 47.619 0.00 0.00 39.30 1.28
5540 6057 2.291741 CTGCTCTCCCGGCAAAATTATC 59.708 50.000 0.00 0.00 39.30 1.75
5541 6058 1.609072 GCTCTCCCGGCAAAATTATCC 59.391 52.381 0.00 0.00 0.00 2.59
5542 6059 2.230660 CTCTCCCGGCAAAATTATCCC 58.769 52.381 0.00 0.00 0.00 3.85
5543 6060 1.133606 TCTCCCGGCAAAATTATCCCC 60.134 52.381 0.00 0.00 0.00 4.81
5544 6061 0.631753 TCCCGGCAAAATTATCCCCA 59.368 50.000 0.00 0.00 0.00 4.96
5545 6062 1.007238 TCCCGGCAAAATTATCCCCAA 59.993 47.619 0.00 0.00 0.00 4.12
5546 6063 1.834263 CCCGGCAAAATTATCCCCAAA 59.166 47.619 0.00 0.00 0.00 3.28
5547 6064 2.419436 CCCGGCAAAATTATCCCCAAAC 60.419 50.000 0.00 0.00 0.00 2.93
5548 6065 2.234908 CCGGCAAAATTATCCCCAAACA 59.765 45.455 0.00 0.00 0.00 2.83
5549 6066 3.118445 CCGGCAAAATTATCCCCAAACAT 60.118 43.478 0.00 0.00 0.00 2.71
5550 6067 4.512484 CGGCAAAATTATCCCCAAACATT 58.488 39.130 0.00 0.00 0.00 2.71
5551 6068 4.940654 CGGCAAAATTATCCCCAAACATTT 59.059 37.500 0.00 0.00 0.00 2.32
5552 6069 5.414144 CGGCAAAATTATCCCCAAACATTTT 59.586 36.000 0.00 0.00 0.00 1.82
5553 6070 6.619744 GGCAAAATTATCCCCAAACATTTTG 58.380 36.000 10.08 10.08 43.26 2.44
5555 6072 7.211966 CAAAATTATCCCCAAACATTTTGCA 57.788 32.000 0.00 0.00 37.76 4.08
5556 6073 6.816134 AAATTATCCCCAAACATTTTGCAC 57.184 33.333 0.00 0.00 0.00 4.57
5557 6074 2.857186 ATCCCCAAACATTTTGCACC 57.143 45.000 0.00 0.00 0.00 5.01
5558 6075 0.761802 TCCCCAAACATTTTGCACCC 59.238 50.000 0.00 0.00 0.00 4.61
5559 6076 0.602372 CCCCAAACATTTTGCACCCG 60.602 55.000 0.00 0.00 0.00 5.28
5560 6077 1.227342 CCCAAACATTTTGCACCCGC 61.227 55.000 0.00 0.00 39.24 6.13
5570 6087 2.800736 GCACCCGCAATCATCCAC 59.199 61.111 0.00 0.00 38.36 4.02
5571 6088 2.045708 GCACCCGCAATCATCCACA 61.046 57.895 0.00 0.00 38.36 4.17
5572 6089 1.594194 GCACCCGCAATCATCCACAA 61.594 55.000 0.00 0.00 38.36 3.33
5573 6090 0.171007 CACCCGCAATCATCCACAAC 59.829 55.000 0.00 0.00 0.00 3.32
5574 6091 0.965363 ACCCGCAATCATCCACAACC 60.965 55.000 0.00 0.00 0.00 3.77
5575 6092 0.680921 CCCGCAATCATCCACAACCT 60.681 55.000 0.00 0.00 0.00 3.50
5576 6093 1.176527 CCGCAATCATCCACAACCTT 58.823 50.000 0.00 0.00 0.00 3.50
5577 6094 1.135315 CCGCAATCATCCACAACCTTG 60.135 52.381 0.00 0.00 0.00 3.61
5578 6095 1.733389 CGCAATCATCCACAACCTTGC 60.733 52.381 0.00 0.00 36.52 4.01
5579 6096 1.404583 GCAATCATCCACAACCTTGCC 60.405 52.381 0.00 0.00 34.41 4.52
5580 6097 2.173519 CAATCATCCACAACCTTGCCT 58.826 47.619 0.00 0.00 0.00 4.75
5581 6098 2.134789 ATCATCCACAACCTTGCCTC 57.865 50.000 0.00 0.00 0.00 4.70
5582 6099 0.038166 TCATCCACAACCTTGCCTCC 59.962 55.000 0.00 0.00 0.00 4.30
5583 6100 0.967380 CATCCACAACCTTGCCTCCC 60.967 60.000 0.00 0.00 0.00 4.30
5584 6101 2.484287 ATCCACAACCTTGCCTCCCG 62.484 60.000 0.00 0.00 0.00 5.14
5585 6102 2.113139 CACAACCTTGCCTCCCGT 59.887 61.111 0.00 0.00 0.00 5.28
5586 6103 1.528309 CACAACCTTGCCTCCCGTT 60.528 57.895 0.00 0.00 0.00 4.44
5587 6104 1.106944 CACAACCTTGCCTCCCGTTT 61.107 55.000 0.00 0.00 0.00 3.60
5588 6105 1.106944 ACAACCTTGCCTCCCGTTTG 61.107 55.000 0.00 0.00 0.00 2.93
5589 6106 0.821711 CAACCTTGCCTCCCGTTTGA 60.822 55.000 0.00 0.00 0.00 2.69
5590 6107 0.112412 AACCTTGCCTCCCGTTTGAT 59.888 50.000 0.00 0.00 0.00 2.57
5591 6108 0.609131 ACCTTGCCTCCCGTTTGATG 60.609 55.000 0.00 0.00 0.00 3.07
5592 6109 0.609131 CCTTGCCTCCCGTTTGATGT 60.609 55.000 0.00 0.00 0.00 3.06
5593 6110 1.247567 CTTGCCTCCCGTTTGATGTT 58.752 50.000 0.00 0.00 0.00 2.71
5594 6111 1.613437 CTTGCCTCCCGTTTGATGTTT 59.387 47.619 0.00 0.00 0.00 2.83
5595 6112 1.698506 TGCCTCCCGTTTGATGTTTT 58.301 45.000 0.00 0.00 0.00 2.43
5596 6113 1.611491 TGCCTCCCGTTTGATGTTTTC 59.389 47.619 0.00 0.00 0.00 2.29
5597 6114 1.886542 GCCTCCCGTTTGATGTTTTCT 59.113 47.619 0.00 0.00 0.00 2.52
5598 6115 3.078837 GCCTCCCGTTTGATGTTTTCTA 58.921 45.455 0.00 0.00 0.00 2.10
5599 6116 3.127030 GCCTCCCGTTTGATGTTTTCTAG 59.873 47.826 0.00 0.00 0.00 2.43
5600 6117 3.127030 CCTCCCGTTTGATGTTTTCTAGC 59.873 47.826 0.00 0.00 0.00 3.42
5601 6118 3.745799 TCCCGTTTGATGTTTTCTAGCA 58.254 40.909 0.00 0.00 0.00 3.49
5602 6119 3.751175 TCCCGTTTGATGTTTTCTAGCAG 59.249 43.478 0.00 0.00 0.00 4.24
5603 6120 3.119849 CCCGTTTGATGTTTTCTAGCAGG 60.120 47.826 0.00 0.00 0.00 4.85
5604 6121 3.751175 CCGTTTGATGTTTTCTAGCAGGA 59.249 43.478 0.00 0.00 0.00 3.86
5605 6122 4.378459 CCGTTTGATGTTTTCTAGCAGGAC 60.378 45.833 0.00 0.00 0.00 3.85
5606 6123 4.378459 CGTTTGATGTTTTCTAGCAGGACC 60.378 45.833 0.00 0.00 0.00 4.46
5607 6124 4.365514 TTGATGTTTTCTAGCAGGACCA 57.634 40.909 0.00 0.00 0.00 4.02
5608 6125 4.365514 TGATGTTTTCTAGCAGGACCAA 57.634 40.909 0.00 0.00 0.00 3.67
5609 6126 4.724399 TGATGTTTTCTAGCAGGACCAAA 58.276 39.130 0.00 0.00 0.00 3.28
5610 6127 4.761739 TGATGTTTTCTAGCAGGACCAAAG 59.238 41.667 0.00 0.00 0.00 2.77
5611 6128 2.884639 TGTTTTCTAGCAGGACCAAAGC 59.115 45.455 0.00 0.00 0.00 3.51
5612 6129 2.884639 GTTTTCTAGCAGGACCAAAGCA 59.115 45.455 0.00 0.00 0.00 3.91
5613 6130 2.479566 TTCTAGCAGGACCAAAGCAG 57.520 50.000 0.00 0.00 0.00 4.24
5614 6131 0.615331 TCTAGCAGGACCAAAGCAGG 59.385 55.000 0.00 0.00 0.00 4.85
5615 6132 0.615331 CTAGCAGGACCAAAGCAGGA 59.385 55.000 0.00 0.00 0.00 3.86
5616 6133 0.615331 TAGCAGGACCAAAGCAGGAG 59.385 55.000 0.00 0.00 0.00 3.69
5617 6134 1.073897 GCAGGACCAAAGCAGGAGT 59.926 57.895 0.00 0.00 0.00 3.85
5618 6135 1.239968 GCAGGACCAAAGCAGGAGTG 61.240 60.000 0.00 0.00 0.00 3.51
5619 6136 0.607489 CAGGACCAAAGCAGGAGTGG 60.607 60.000 0.00 0.00 38.46 4.00
5620 6137 1.973812 GGACCAAAGCAGGAGTGGC 60.974 63.158 0.00 0.00 35.72 5.01
5621 6138 1.973812 GACCAAAGCAGGAGTGGCC 60.974 63.158 0.00 0.00 35.72 5.36
5630 6147 4.475527 GGAGTGGCCTTGTTTCGT 57.524 55.556 3.32 0.00 0.00 3.85
5631 6148 3.618171 GGAGTGGCCTTGTTTCGTA 57.382 52.632 3.32 0.00 0.00 3.43
5632 6149 1.886886 GGAGTGGCCTTGTTTCGTAA 58.113 50.000 3.32 0.00 0.00 3.18
5633 6150 1.534163 GGAGTGGCCTTGTTTCGTAAC 59.466 52.381 3.32 0.00 34.75 2.50
5634 6151 2.215196 GAGTGGCCTTGTTTCGTAACA 58.785 47.619 3.32 3.22 42.34 2.41
5635 6152 1.944709 AGTGGCCTTGTTTCGTAACAC 59.055 47.619 7.15 0.00 43.66 3.32
5636 6153 1.944709 GTGGCCTTGTTTCGTAACACT 59.055 47.619 7.15 0.00 43.66 3.55
5637 6154 2.032290 GTGGCCTTGTTTCGTAACACTC 60.032 50.000 7.15 0.19 43.66 3.51
5638 6155 1.193874 GGCCTTGTTTCGTAACACTCG 59.806 52.381 7.15 0.00 43.66 4.18
5639 6156 1.193874 GCCTTGTTTCGTAACACTCGG 59.806 52.381 7.15 9.34 43.66 4.63
5640 6157 2.476821 CCTTGTTTCGTAACACTCGGT 58.523 47.619 7.15 0.00 43.66 4.69
5641 6158 2.220133 CCTTGTTTCGTAACACTCGGTG 59.780 50.000 7.15 2.92 43.66 4.94
5642 6159 1.210870 TGTTTCGTAACACTCGGTGC 58.789 50.000 3.22 0.00 39.29 5.01
5643 6160 1.210870 GTTTCGTAACACTCGGTGCA 58.789 50.000 0.00 0.00 36.98 4.57
5644 6161 1.796459 GTTTCGTAACACTCGGTGCAT 59.204 47.619 0.00 0.00 36.98 3.96
5645 6162 2.157834 TTCGTAACACTCGGTGCATT 57.842 45.000 0.00 0.00 36.98 3.56
5646 6163 3.300852 TTCGTAACACTCGGTGCATTA 57.699 42.857 0.00 0.00 36.98 1.90
5647 6164 2.598589 TCGTAACACTCGGTGCATTAC 58.401 47.619 0.00 0.00 36.98 1.89
5648 6165 1.319374 CGTAACACTCGGTGCATTACG 59.681 52.381 17.07 17.07 39.82 3.18
5649 6166 1.060122 GTAACACTCGGTGCATTACGC 59.940 52.381 0.00 0.00 36.98 4.42
5650 6167 0.320421 AACACTCGGTGCATTACGCT 60.320 50.000 0.00 0.00 43.06 5.07
5651 6168 0.736325 ACACTCGGTGCATTACGCTC 60.736 55.000 0.00 0.00 43.06 5.03
5652 6169 0.735978 CACTCGGTGCATTACGCTCA 60.736 55.000 0.00 0.00 43.06 4.26
5653 6170 0.175760 ACTCGGTGCATTACGCTCAT 59.824 50.000 0.00 0.00 43.06 2.90
5654 6171 0.855349 CTCGGTGCATTACGCTCATC 59.145 55.000 0.00 0.00 43.06 2.92
5655 6172 0.529773 TCGGTGCATTACGCTCATCC 60.530 55.000 0.00 0.00 43.06 3.51
5656 6173 0.809636 CGGTGCATTACGCTCATCCA 60.810 55.000 0.00 0.00 43.06 3.41
5657 6174 1.378531 GGTGCATTACGCTCATCCAA 58.621 50.000 0.00 0.00 43.06 3.53
5658 6175 1.742831 GGTGCATTACGCTCATCCAAA 59.257 47.619 0.00 0.00 43.06 3.28
5659 6176 2.163412 GGTGCATTACGCTCATCCAAAA 59.837 45.455 0.00 0.00 43.06 2.44
5660 6177 3.181487 GGTGCATTACGCTCATCCAAAAT 60.181 43.478 0.00 0.00 43.06 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.210724 CCCAAAATCTGGCATTGTGATT 57.789 40.909 0.00 0.00 44.90 2.57
153 161 4.817063 CGGCGTGGCGATTGCAAG 62.817 66.667 10.58 0.00 45.35 4.01
189 197 4.005472 CGATCCATTCGCCGCTGC 62.005 66.667 0.00 0.00 41.69 5.25
197 205 2.325857 GCTGCGTGCGATCCATTC 59.674 61.111 0.00 0.00 0.00 2.67
210 218 4.005472 CGATCCATTCGCCGCTGC 62.005 66.667 0.00 0.00 41.69 5.25
218 226 0.026803 GAACTGCGTGCGATCCATTC 59.973 55.000 0.00 0.00 0.00 2.67
219 227 1.369091 GGAACTGCGTGCGATCCATT 61.369 55.000 0.00 0.00 0.00 3.16
220 228 1.815421 GGAACTGCGTGCGATCCAT 60.815 57.895 0.00 0.00 0.00 3.41
221 229 2.434185 GGAACTGCGTGCGATCCA 60.434 61.111 0.00 0.00 0.00 3.41
222 230 3.554692 CGGAACTGCGTGCGATCC 61.555 66.667 0.00 0.00 33.69 3.36
223 231 4.210304 GCGGAACTGCGTGCGATC 62.210 66.667 0.00 0.00 33.69 3.69
224 232 4.742201 AGCGGAACTGCGTGCGAT 62.742 61.111 0.00 0.00 40.67 4.58
227 235 3.300667 CTTCAGCGGAACTGCGTGC 62.301 63.158 0.00 0.00 46.76 5.34
228 236 1.621301 CTCTTCAGCGGAACTGCGTG 61.621 60.000 0.00 0.48 46.76 5.34
229 237 1.373497 CTCTTCAGCGGAACTGCGT 60.373 57.895 0.00 0.00 46.76 5.24
270 278 2.808543 GTCCGAGTGCAAAGACAGAAAT 59.191 45.455 0.00 0.00 0.00 2.17
427 447 2.361119 CGTCTTGACCTCGATCCCATTA 59.639 50.000 0.00 0.00 0.00 1.90
511 555 2.514013 CGCGCCGGTTCACAGATAC 61.514 63.158 1.90 0.00 0.00 2.24
606 651 1.580059 GTACTTCATCCCACCTCCCA 58.420 55.000 0.00 0.00 0.00 4.37
643 689 3.139077 GTCAGTCAATTTTCGTCCCACT 58.861 45.455 0.00 0.00 0.00 4.00
647 693 2.409975 TCCGTCAGTCAATTTTCGTCC 58.590 47.619 0.00 0.00 0.00 4.79
648 694 3.121445 GTCTCCGTCAGTCAATTTTCGTC 59.879 47.826 0.00 0.00 0.00 4.20
649 695 3.057734 GTCTCCGTCAGTCAATTTTCGT 58.942 45.455 0.00 0.00 0.00 3.85
650 696 3.318017 AGTCTCCGTCAGTCAATTTTCG 58.682 45.455 0.00 0.00 0.00 3.46
651 697 6.100004 TGATAGTCTCCGTCAGTCAATTTTC 58.900 40.000 0.00 0.00 0.00 2.29
652 698 6.037786 TGATAGTCTCCGTCAGTCAATTTT 57.962 37.500 0.00 0.00 0.00 1.82
653 699 5.661056 TGATAGTCTCCGTCAGTCAATTT 57.339 39.130 0.00 0.00 0.00 1.82
654 700 5.186021 AGTTGATAGTCTCCGTCAGTCAATT 59.814 40.000 0.00 0.00 0.00 2.32
655 701 4.707448 AGTTGATAGTCTCCGTCAGTCAAT 59.293 41.667 0.00 0.00 0.00 2.57
656 702 4.079970 AGTTGATAGTCTCCGTCAGTCAA 58.920 43.478 0.00 0.00 0.00 3.18
657 703 3.440522 CAGTTGATAGTCTCCGTCAGTCA 59.559 47.826 0.00 0.00 0.00 3.41
658 704 3.690139 TCAGTTGATAGTCTCCGTCAGTC 59.310 47.826 0.00 0.00 0.00 3.51
659 705 3.687125 TCAGTTGATAGTCTCCGTCAGT 58.313 45.455 0.00 0.00 0.00 3.41
660 706 3.942115 TCTCAGTTGATAGTCTCCGTCAG 59.058 47.826 0.00 0.00 0.00 3.51
661 707 3.690139 GTCTCAGTTGATAGTCTCCGTCA 59.310 47.826 0.00 0.00 0.00 4.35
662 708 3.690139 TGTCTCAGTTGATAGTCTCCGTC 59.310 47.826 0.00 0.00 0.00 4.79
663 709 3.687125 TGTCTCAGTTGATAGTCTCCGT 58.313 45.455 0.00 0.00 0.00 4.69
664 710 4.909696 ATGTCTCAGTTGATAGTCTCCG 57.090 45.455 0.00 0.00 0.00 4.63
665 711 7.101652 TGTAATGTCTCAGTTGATAGTCTCC 57.898 40.000 0.00 0.00 0.00 3.71
668 714 9.469807 CCTAATGTAATGTCTCAGTTGATAGTC 57.530 37.037 0.00 0.00 0.00 2.59
669 715 9.201989 TCCTAATGTAATGTCTCAGTTGATAGT 57.798 33.333 0.00 0.00 0.00 2.12
670 716 9.689976 CTCCTAATGTAATGTCTCAGTTGATAG 57.310 37.037 0.00 0.00 0.00 2.08
671 717 9.201989 ACTCCTAATGTAATGTCTCAGTTGATA 57.798 33.333 0.00 0.00 0.00 2.15
672 718 8.083828 ACTCCTAATGTAATGTCTCAGTTGAT 57.916 34.615 0.00 0.00 0.00 2.57
673 719 7.482169 ACTCCTAATGTAATGTCTCAGTTGA 57.518 36.000 0.00 0.00 0.00 3.18
674 720 8.687242 TCTACTCCTAATGTAATGTCTCAGTTG 58.313 37.037 0.00 0.00 0.00 3.16
675 721 8.824756 TCTACTCCTAATGTAATGTCTCAGTT 57.175 34.615 0.00 0.00 0.00 3.16
676 722 8.275758 TCTCTACTCCTAATGTAATGTCTCAGT 58.724 37.037 0.00 0.00 0.00 3.41
677 723 8.684386 TCTCTACTCCTAATGTAATGTCTCAG 57.316 38.462 0.00 0.00 0.00 3.35
678 724 9.647918 AATCTCTACTCCTAATGTAATGTCTCA 57.352 33.333 0.00 0.00 0.00 3.27
689 735 9.898152 CCAAGAAGAAAAATCTCTACTCCTAAT 57.102 33.333 0.00 0.00 0.00 1.73
690 736 7.824779 GCCAAGAAGAAAAATCTCTACTCCTAA 59.175 37.037 0.00 0.00 0.00 2.69
691 737 7.331791 GCCAAGAAGAAAAATCTCTACTCCTA 58.668 38.462 0.00 0.00 0.00 2.94
692 738 6.176896 GCCAAGAAGAAAAATCTCTACTCCT 58.823 40.000 0.00 0.00 0.00 3.69
693 739 5.064071 CGCCAAGAAGAAAAATCTCTACTCC 59.936 44.000 0.00 0.00 0.00 3.85
694 740 5.869888 TCGCCAAGAAGAAAAATCTCTACTC 59.130 40.000 0.00 0.00 0.00 2.59
695 741 5.794894 TCGCCAAGAAGAAAAATCTCTACT 58.205 37.500 0.00 0.00 0.00 2.57
696 742 6.073222 TGTTCGCCAAGAAGAAAAATCTCTAC 60.073 38.462 0.00 0.00 39.95 2.59
697 743 5.995282 TGTTCGCCAAGAAGAAAAATCTCTA 59.005 36.000 0.00 0.00 39.95 2.43
698 744 4.821805 TGTTCGCCAAGAAGAAAAATCTCT 59.178 37.500 0.00 0.00 39.95 3.10
699 745 5.108385 TGTTCGCCAAGAAGAAAAATCTC 57.892 39.130 0.00 0.00 39.95 2.75
700 746 5.163561 TGTTGTTCGCCAAGAAGAAAAATCT 60.164 36.000 0.00 0.00 42.63 2.40
701 747 5.040635 TGTTGTTCGCCAAGAAGAAAAATC 58.959 37.500 0.00 0.00 42.63 2.17
702 748 5.004922 TGTTGTTCGCCAAGAAGAAAAAT 57.995 34.783 0.00 0.00 42.63 1.82
703 749 4.420168 CTGTTGTTCGCCAAGAAGAAAAA 58.580 39.130 0.00 0.00 42.63 1.94
704 750 3.181491 CCTGTTGTTCGCCAAGAAGAAAA 60.181 43.478 0.00 0.00 42.63 2.29
705 751 2.357637 CCTGTTGTTCGCCAAGAAGAAA 59.642 45.455 0.00 0.00 42.63 2.52
706 752 1.946768 CCTGTTGTTCGCCAAGAAGAA 59.053 47.619 0.00 0.00 39.95 2.52
707 753 1.140052 TCCTGTTGTTCGCCAAGAAGA 59.860 47.619 0.00 0.00 39.95 2.87
708 754 1.593196 TCCTGTTGTTCGCCAAGAAG 58.407 50.000 0.00 0.00 39.95 2.85
709 755 1.946768 CTTCCTGTTGTTCGCCAAGAA 59.053 47.619 0.00 0.00 36.31 2.52
710 756 1.593196 CTTCCTGTTGTTCGCCAAGA 58.407 50.000 0.00 0.00 32.51 3.02
711 757 0.040067 GCTTCCTGTTGTTCGCCAAG 60.040 55.000 0.00 0.00 32.51 3.61
712 758 0.465460 AGCTTCCTGTTGTTCGCCAA 60.465 50.000 0.00 0.00 0.00 4.52
713 759 0.884704 GAGCTTCCTGTTGTTCGCCA 60.885 55.000 0.00 0.00 0.00 5.69
714 760 0.603975 AGAGCTTCCTGTTGTTCGCC 60.604 55.000 0.00 0.00 0.00 5.54
715 761 2.080286 TAGAGCTTCCTGTTGTTCGC 57.920 50.000 0.00 0.00 0.00 4.70
716 762 3.118956 AGGATAGAGCTTCCTGTTGTTCG 60.119 47.826 4.57 0.00 42.11 3.95
717 763 4.479786 AGGATAGAGCTTCCTGTTGTTC 57.520 45.455 4.57 0.00 42.11 3.18
724 770 1.885049 TTGGCAGGATAGAGCTTCCT 58.115 50.000 0.00 0.00 44.60 3.36
725 771 2.717639 TTTGGCAGGATAGAGCTTCC 57.282 50.000 0.00 0.00 0.00 3.46
744 790 2.831526 CCGGTCCTGGATTGGAATTTTT 59.168 45.455 10.72 0.00 37.93 1.94
883 937 1.716826 GAGGACTCGTGCTCTACCCG 61.717 65.000 10.79 0.00 43.56 5.28
886 940 0.743701 TCGGAGGACTCGTGCTCTAC 60.744 60.000 16.38 2.49 45.76 2.59
887 941 0.462225 CTCGGAGGACTCGTGCTCTA 60.462 60.000 16.38 6.34 45.76 2.43
888 942 1.747367 CTCGGAGGACTCGTGCTCT 60.747 63.158 16.38 0.00 45.76 4.09
889 943 1.306642 TTCTCGGAGGACTCGTGCTC 61.307 60.000 9.74 9.74 45.76 4.26
890 944 1.303398 TTCTCGGAGGACTCGTGCT 60.303 57.895 4.96 0.00 0.00 4.40
891 945 1.137825 CTTCTCGGAGGACTCGTGC 59.862 63.158 4.96 0.00 0.00 5.34
892 946 0.730265 CTCTTCTCGGAGGACTCGTG 59.270 60.000 4.96 0.00 0.00 4.35
893 947 1.027792 GCTCTTCTCGGAGGACTCGT 61.028 60.000 4.96 0.00 34.21 4.18
894 948 1.725066 GCTCTTCTCGGAGGACTCG 59.275 63.158 4.96 0.00 34.21 4.18
895 949 1.725066 CGCTCTTCTCGGAGGACTC 59.275 63.158 4.96 0.00 34.21 3.36
896 950 2.411504 GCGCTCTTCTCGGAGGACT 61.412 63.158 0.00 0.00 34.21 3.85
897 951 2.103340 GCGCTCTTCTCGGAGGAC 59.897 66.667 0.00 0.00 34.21 3.85
898 952 3.509757 CGCGCTCTTCTCGGAGGA 61.510 66.667 5.56 0.00 34.21 3.71
899 953 2.343163 ATTCGCGCTCTTCTCGGAGG 62.343 60.000 5.56 0.00 34.21 4.30
900 954 0.932585 GATTCGCGCTCTTCTCGGAG 60.933 60.000 5.56 0.00 36.50 4.63
901 955 1.064296 GATTCGCGCTCTTCTCGGA 59.936 57.895 5.56 0.00 0.00 4.55
902 956 1.946650 GGATTCGCGCTCTTCTCGG 60.947 63.158 5.56 0.00 0.00 4.63
903 957 1.946650 GGGATTCGCGCTCTTCTCG 60.947 63.158 5.56 0.00 0.00 4.04
904 958 1.592939 GGGGATTCGCGCTCTTCTC 60.593 63.158 5.56 0.00 0.00 2.87
905 959 1.899437 TTGGGGATTCGCGCTCTTCT 61.899 55.000 5.56 0.00 0.00 2.85
906 960 1.449601 TTGGGGATTCGCGCTCTTC 60.450 57.895 5.56 0.00 0.00 2.87
907 961 1.745489 GTTGGGGATTCGCGCTCTT 60.745 57.895 5.56 0.00 0.00 2.85
1153 1254 1.271982 ACCGAGTCTAGCACAAGAGGA 60.272 52.381 0.00 0.00 0.00 3.71
1161 1262 2.707849 GGCCGAACCGAGTCTAGCA 61.708 63.158 0.00 0.00 0.00 3.49
1345 1447 3.775261 TTCCCCACCTGTAACTGTAAC 57.225 47.619 0.00 0.00 0.00 2.50
1346 1448 4.507691 CCAATTCCCCACCTGTAACTGTAA 60.508 45.833 0.00 0.00 0.00 2.41
1347 1449 3.009695 CCAATTCCCCACCTGTAACTGTA 59.990 47.826 0.00 0.00 0.00 2.74
1348 1450 2.225017 CCAATTCCCCACCTGTAACTGT 60.225 50.000 0.00 0.00 0.00 3.55
1349 1451 2.446435 CCAATTCCCCACCTGTAACTG 58.554 52.381 0.00 0.00 0.00 3.16
1350 1452 1.357761 CCCAATTCCCCACCTGTAACT 59.642 52.381 0.00 0.00 0.00 2.24
1392 1513 3.531538 CAAGAGGACGGCAAAAGCTATA 58.468 45.455 0.00 0.00 0.00 1.31
1393 1514 2.359900 CAAGAGGACGGCAAAAGCTAT 58.640 47.619 0.00 0.00 0.00 2.97
1414 1535 2.180131 CTCAGCAACGCAGAACAGGC 62.180 60.000 0.00 0.00 0.00 4.85
1443 1565 3.327757 AGATCAACCTGCTTCCTTGTGTA 59.672 43.478 0.00 0.00 0.00 2.90
1487 1609 6.803807 GCAGAAAATGTCTAGAAAATCACCAC 59.196 38.462 0.00 0.00 33.56 4.16
1490 1612 7.025963 CCAGCAGAAAATGTCTAGAAAATCAC 58.974 38.462 0.00 0.00 33.56 3.06
1521 1668 3.579709 CAGTCGACACTGCATAGAAGTT 58.420 45.455 19.50 0.00 43.77 2.66
1549 1697 8.940952 CATCCTAAAGAAACTAACTTCTTCTGG 58.059 37.037 0.00 5.42 43.33 3.86
1563 1711 9.383519 GAAGTATCATCACACATCCTAAAGAAA 57.616 33.333 0.00 0.00 0.00 2.52
1594 1742 3.034721 AGTCGCATTCTTAACGGAACA 57.965 42.857 0.00 0.00 0.00 3.18
1604 1752 1.137086 ACCGCATAGAAGTCGCATTCT 59.863 47.619 7.07 7.07 42.20 2.40
1640 1788 8.437575 ACATCCTAAAGAAACTAACTTCTTCCA 58.562 33.333 0.00 0.00 43.33 3.53
1641 1789 8.722394 CACATCCTAAAGAAACTAACTTCTTCC 58.278 37.037 0.00 0.00 43.33 3.46
1652 1854 8.723942 AGTATCATCACACATCCTAAAGAAAC 57.276 34.615 0.00 0.00 0.00 2.78
1699 1974 1.893689 GTAAAAACATACACGTGCGCG 59.106 47.619 19.78 19.78 44.93 6.86
1702 1977 5.107220 ACTGCTAGTAAAAACATACACGTGC 60.107 40.000 17.22 0.00 0.00 5.34
1706 1981 9.309516 TGCTATACTGCTAGTAAAAACATACAC 57.690 33.333 0.00 0.00 33.89 2.90
1736 2011 8.029642 ACTACACCATTTTAAAATGAGAGACG 57.970 34.615 32.84 20.80 46.72 4.18
1740 2015 9.444600 GGAGTACTACACCATTTTAAAATGAGA 57.555 33.333 32.84 17.85 46.72 3.27
1741 2016 9.226606 TGGAGTACTACACCATTTTAAAATGAG 57.773 33.333 32.84 26.63 46.72 2.90
1742 2017 9.005777 GTGGAGTACTACACCATTTTAAAATGA 57.994 33.333 32.84 17.47 40.82 2.57
1743 2018 9.010029 AGTGGAGTACTACACCATTTTAAAATG 57.990 33.333 30.69 27.09 45.48 2.32
1744 2019 9.010029 CAGTGGAGTACTACACCATTTTAAAAT 57.990 33.333 30.69 8.84 45.48 1.82
1748 2023 6.921486 TCAGTGGAGTACTACACCATTTTA 57.079 37.500 30.69 10.40 45.48 1.52
1753 2028 3.840991 ACTTCAGTGGAGTACTACACCA 58.159 45.455 30.69 17.47 45.48 4.17
1879 2154 1.419387 AGGCTGGAGCAGGAATGATAC 59.581 52.381 0.20 0.00 44.36 2.24
1954 2229 4.735985 TGAACATCACATGTAATTGCAGC 58.264 39.130 0.00 0.00 44.07 5.25
1988 2263 5.187772 TGGAATGATCACTACTTGCTACTGT 59.812 40.000 0.00 0.00 0.00 3.55
1998 2273 3.802948 ACCGACTGGAATGATCACTAC 57.197 47.619 0.00 0.00 39.21 2.73
2369 2644 5.008712 CACCTCTTTGTCAGTTTTAGGTTCC 59.991 44.000 0.00 0.00 33.67 3.62
2380 2655 0.034059 ACTCGCCACCTCTTTGTCAG 59.966 55.000 0.00 0.00 0.00 3.51
2453 2728 0.679002 CTGGCATGTTGGTCAGGGAG 60.679 60.000 0.00 0.00 36.86 4.30
2592 2867 1.876156 GCAACCATAGCATACAGGAGC 59.124 52.381 0.00 0.00 0.00 4.70
2603 2878 5.773575 AGTAGTCGATATGTGCAACCATAG 58.226 41.667 3.71 0.00 34.36 2.23
2641 2916 4.142988 CCATGTGCTGCAAAATTGTGAATC 60.143 41.667 2.77 0.00 0.00 2.52
2663 2938 4.723309 AGACAAAGATATTCCATGCCTCC 58.277 43.478 0.00 0.00 0.00 4.30
2802 3109 6.665248 CCCAAGGAAGAATTACTCTTTGGAAT 59.335 38.462 22.27 0.00 39.38 3.01
2821 3128 3.191078 TGTGAAAAACATTGCCCAAGG 57.809 42.857 0.00 0.00 32.36 3.61
2876 3185 8.942669 TTATGACAGCAAAATAAGTGTTTACG 57.057 30.769 0.00 0.00 0.00 3.18
2937 3329 4.510340 CCAACTACCTGTTACAGAACACAC 59.490 45.833 14.66 0.00 40.72 3.82
2977 3369 3.826729 GCCTCAACTAGACCACCAAAAAT 59.173 43.478 0.00 0.00 0.00 1.82
3081 3473 5.359576 TGCAATACCCAATTTCCATCAGTAC 59.640 40.000 0.00 0.00 0.00 2.73
3384 3779 2.240921 TCATTGCCAGCCACAACCTATA 59.759 45.455 0.00 0.00 0.00 1.31
3392 3787 2.187599 GACACGTCATTGCCAGCCAC 62.188 60.000 0.00 0.00 0.00 5.01
3416 3811 0.249911 GGGTTAGTCCATAGGCAGCG 60.250 60.000 0.00 0.00 38.11 5.18
3496 3891 7.883391 TTGGACACACCTAACTAAAAATTGA 57.117 32.000 0.00 0.00 39.86 2.57
3600 4028 3.553508 GGTTCAAAATGCTCACATGTGCT 60.554 43.478 21.38 2.75 36.36 4.40
3732 4161 6.639632 AATACTTATTGGCACCTGCAATAG 57.360 37.500 0.00 0.00 44.36 1.73
3734 4163 7.944554 AGTATAATACTTATTGGCACCTGCAAT 59.055 33.333 0.00 0.00 38.20 3.56
4050 4486 4.423275 TCAATGGGGATGGGGAGATAAAAT 59.577 41.667 0.00 0.00 0.00 1.82
4069 4505 5.979993 TGGATGTAATTGCATTTGCTCAAT 58.020 33.333 10.53 0.00 42.66 2.57
4510 5005 2.040947 TCAACACCCACATAAGATGGCA 59.959 45.455 0.00 0.00 35.74 4.92
4529 5024 8.171164 AGTTACATATCTGACTCGATGAATCA 57.829 34.615 0.00 0.00 0.00 2.57
4708 5204 2.066262 TGCACACTAAAGTTCTAGCGC 58.934 47.619 0.00 0.00 0.00 5.92
4717 5213 2.086869 CCATGGTCCTGCACACTAAAG 58.913 52.381 2.57 0.00 0.00 1.85
4748 5244 3.132289 ACAAGACAAGTTCTCACTTCCGA 59.868 43.478 0.00 0.00 41.69 4.55
4749 5245 3.458189 ACAAGACAAGTTCTCACTTCCG 58.542 45.455 0.00 0.00 41.69 4.30
4750 5246 3.491267 CGACAAGACAAGTTCTCACTTCC 59.509 47.826 0.00 0.00 41.69 3.46
4751 5247 4.360563 TCGACAAGACAAGTTCTCACTTC 58.639 43.478 0.00 0.00 41.69 3.01
4820 5316 0.107654 ATCAGTAAGCCTGTTCCGCC 60.108 55.000 0.00 0.00 42.19 6.13
4842 5338 1.075542 TGCCGCTGTAATTCGAACAG 58.924 50.000 10.72 10.72 45.80 3.16
4895 5391 2.425143 TTCCCATGAATCAGCCTCAC 57.575 50.000 0.00 0.00 0.00 3.51
5013 5509 2.347150 CGAAAGCAACACCCAAAAACAC 59.653 45.455 0.00 0.00 0.00 3.32
5015 5511 2.601314 GTCGAAAGCAACACCCAAAAAC 59.399 45.455 0.00 0.00 0.00 2.43
5020 5516 0.107410 ACTGTCGAAAGCAACACCCA 60.107 50.000 1.37 0.00 0.00 4.51
5067 5563 2.925966 TTTGATTGCCCTCTCCCAAT 57.074 45.000 0.00 0.00 34.57 3.16
5072 5575 2.692041 CCCTTCATTTGATTGCCCTCTC 59.308 50.000 0.00 0.00 0.00 3.20
5078 5581 1.826720 TGCCTCCCTTCATTTGATTGC 59.173 47.619 0.00 0.00 0.00 3.56
5142 5650 0.536687 TCGGAGACACGAGACCTTGT 60.537 55.000 0.00 0.00 38.06 3.16
5152 5661 2.047179 GGGTTGGCTCGGAGACAC 60.047 66.667 14.39 8.86 29.12 3.67
5169 5678 4.186926 TCAGGATTCTTCGAGAAAGCATG 58.813 43.478 5.69 5.69 37.82 4.06
5171 5680 3.961480 TCAGGATTCTTCGAGAAAGCA 57.039 42.857 2.21 0.00 37.82 3.91
5191 5700 2.177594 CTGCCAAGCTCTCCTCGGTT 62.178 60.000 0.00 0.00 0.00 4.44
5214 5723 2.081161 ACCCATCCCATGAGGCTCC 61.081 63.158 12.86 0.00 34.51 4.70
5215 5724 1.150081 CACCCATCCCATGAGGCTC 59.850 63.158 7.79 7.79 34.51 4.70
5216 5725 1.217057 AACACCCATCCCATGAGGCT 61.217 55.000 0.00 0.00 34.51 4.58
5217 5726 1.039233 CAACACCCATCCCATGAGGC 61.039 60.000 0.00 0.00 34.51 4.70
5221 5730 3.619938 GGCAACACCCATCCCATG 58.380 61.111 0.00 0.00 0.00 3.66
5244 5761 5.122239 CAGATGTTTTCGTGAGCTATTGGAA 59.878 40.000 0.00 0.00 0.00 3.53
5245 5762 4.631377 CAGATGTTTTCGTGAGCTATTGGA 59.369 41.667 0.00 0.00 0.00 3.53
5303 5820 3.118905 CCTCTAGGTCATGCTAAAGGC 57.881 52.381 0.00 0.00 42.22 4.35
5316 5833 3.868757 TCATGTTTCGTGACCTCTAGG 57.131 47.619 0.00 0.00 42.17 3.02
5317 5834 6.727824 ATTTTCATGTTTCGTGACCTCTAG 57.272 37.500 0.00 0.00 0.00 2.43
5318 5835 6.148811 GGAATTTTCATGTTTCGTGACCTCTA 59.851 38.462 0.00 0.00 0.00 2.43
5320 5837 5.048713 AGGAATTTTCATGTTTCGTGACCTC 60.049 40.000 0.00 0.00 0.00 3.85
5321 5838 4.827284 AGGAATTTTCATGTTTCGTGACCT 59.173 37.500 0.00 0.00 0.00 3.85
5322 5839 5.121221 AGGAATTTTCATGTTTCGTGACC 57.879 39.130 0.00 0.00 0.00 4.02
5323 5840 6.205784 TCAAGGAATTTTCATGTTTCGTGAC 58.794 36.000 0.00 0.00 0.00 3.67
5324 5841 6.384258 TCAAGGAATTTTCATGTTTCGTGA 57.616 33.333 0.00 0.00 0.00 4.35
5325 5842 7.462109 TTTCAAGGAATTTTCATGTTTCGTG 57.538 32.000 0.00 0.00 0.00 4.35
5326 5843 8.661352 ATTTTCAAGGAATTTTCATGTTTCGT 57.339 26.923 0.00 0.00 0.00 3.85
5327 5844 8.223100 GGATTTTCAAGGAATTTTCATGTTTCG 58.777 33.333 0.00 0.00 0.00 3.46
5328 5845 9.054922 TGGATTTTCAAGGAATTTTCATGTTTC 57.945 29.630 0.00 0.00 0.00 2.78
5329 5846 8.977267 TGGATTTTCAAGGAATTTTCATGTTT 57.023 26.923 0.00 0.00 0.00 2.83
5330 5847 8.977267 TTGGATTTTCAAGGAATTTTCATGTT 57.023 26.923 0.00 0.00 0.00 2.71
5331 5848 8.977267 TTTGGATTTTCAAGGAATTTTCATGT 57.023 26.923 0.00 0.00 0.00 3.21
5335 5852 9.681692 CCATTTTTGGATTTTCAAGGAATTTTC 57.318 29.630 0.00 0.00 0.00 2.29
5339 5856 6.716173 CCACCATTTTTGGATTTTCAAGGAAT 59.284 34.615 0.00 0.00 36.02 3.01
5341 5858 5.367937 TCCACCATTTTTGGATTTTCAAGGA 59.632 36.000 0.00 0.00 38.28 3.36
5346 5863 6.313658 GCATAGTCCACCATTTTTGGATTTTC 59.686 38.462 0.00 0.00 45.05 2.29
5358 5875 1.521764 TCATGGGCATAGTCCACCAT 58.478 50.000 0.00 0.00 41.42 3.55
5375 5892 5.568685 TGTCGTCATTTTGGAAGTTTTCA 57.431 34.783 0.00 0.00 0.00 2.69
5426 5943 7.905265 TCCTTGATTAATGAATGAGGCAAAAA 58.095 30.769 0.00 0.00 30.24 1.94
5427 5944 7.178983 ACTCCTTGATTAATGAATGAGGCAAAA 59.821 33.333 18.84 0.00 30.24 2.44
5428 5945 6.664816 ACTCCTTGATTAATGAATGAGGCAAA 59.335 34.615 18.84 0.00 30.24 3.68
5429 5946 6.189859 ACTCCTTGATTAATGAATGAGGCAA 58.810 36.000 18.84 4.12 30.24 4.52
5430 5947 5.759059 ACTCCTTGATTAATGAATGAGGCA 58.241 37.500 18.84 0.00 30.24 4.75
5431 5948 6.705863 AACTCCTTGATTAATGAATGAGGC 57.294 37.500 18.84 0.00 30.24 4.70
5432 5949 9.618890 TTCTAACTCCTTGATTAATGAATGAGG 57.381 33.333 18.84 5.20 0.00 3.86
5434 5951 9.958180 TGTTCTAACTCCTTGATTAATGAATGA 57.042 29.630 0.00 0.00 0.00 2.57
5445 5962 9.621629 TGTTAAAATCTTGTTCTAACTCCTTGA 57.378 29.630 0.00 0.00 0.00 3.02
5455 5972 9.520204 CATGTCACTTTGTTAAAATCTTGTTCT 57.480 29.630 0.00 0.00 0.00 3.01
5456 5973 8.268738 GCATGTCACTTTGTTAAAATCTTGTTC 58.731 33.333 0.00 0.00 0.00 3.18
5457 5974 7.981225 AGCATGTCACTTTGTTAAAATCTTGTT 59.019 29.630 0.00 0.00 0.00 2.83
5458 5975 7.491682 AGCATGTCACTTTGTTAAAATCTTGT 58.508 30.769 0.00 0.00 0.00 3.16
5459 5976 7.935338 AGCATGTCACTTTGTTAAAATCTTG 57.065 32.000 0.00 0.00 0.00 3.02
5460 5977 7.653311 GGAAGCATGTCACTTTGTTAAAATCTT 59.347 33.333 0.00 0.00 0.00 2.40
5461 5978 7.147976 GGAAGCATGTCACTTTGTTAAAATCT 58.852 34.615 0.00 0.00 0.00 2.40
5462 5979 6.366061 GGGAAGCATGTCACTTTGTTAAAATC 59.634 38.462 0.00 0.00 0.00 2.17
5463 5980 6.183360 TGGGAAGCATGTCACTTTGTTAAAAT 60.183 34.615 0.00 0.00 0.00 1.82
5464 5981 5.127845 TGGGAAGCATGTCACTTTGTTAAAA 59.872 36.000 0.00 0.00 0.00 1.52
5465 5982 4.646945 TGGGAAGCATGTCACTTTGTTAAA 59.353 37.500 0.00 0.00 0.00 1.52
5466 5983 4.037446 GTGGGAAGCATGTCACTTTGTTAA 59.963 41.667 0.00 0.00 0.00 2.01
5467 5984 3.568007 GTGGGAAGCATGTCACTTTGTTA 59.432 43.478 0.00 0.00 0.00 2.41
5468 5985 2.362077 GTGGGAAGCATGTCACTTTGTT 59.638 45.455 0.00 0.00 0.00 2.83
5469 5986 1.956477 GTGGGAAGCATGTCACTTTGT 59.044 47.619 0.00 0.00 0.00 2.83
5470 5987 1.955778 TGTGGGAAGCATGTCACTTTG 59.044 47.619 0.00 0.00 0.00 2.77
5471 5988 2.363306 TGTGGGAAGCATGTCACTTT 57.637 45.000 0.00 0.00 0.00 2.66
5472 5989 2.363306 TTGTGGGAAGCATGTCACTT 57.637 45.000 0.00 0.00 0.00 3.16
5473 5990 2.363306 TTTGTGGGAAGCATGTCACT 57.637 45.000 0.00 0.00 0.00 3.41
5474 5991 2.288395 CCTTTTGTGGGAAGCATGTCAC 60.288 50.000 0.00 0.00 0.00 3.67
5475 5992 1.962807 CCTTTTGTGGGAAGCATGTCA 59.037 47.619 0.00 0.00 0.00 3.58
5476 5993 2.730550 CCTTTTGTGGGAAGCATGTC 57.269 50.000 0.00 0.00 0.00 3.06
5485 6002 1.118965 GGTGGTTCCCCTTTTGTGGG 61.119 60.000 0.00 0.00 46.68 4.61
5486 6003 2.436521 GGTGGTTCCCCTTTTGTGG 58.563 57.895 0.00 0.00 0.00 4.17
5496 6013 2.983592 CGTGCTTGGGGTGGTTCC 60.984 66.667 0.00 0.00 0.00 3.62
5497 6014 2.983592 CCGTGCTTGGGGTGGTTC 60.984 66.667 0.00 0.00 0.00 3.62
5498 6015 4.596585 CCCGTGCTTGGGGTGGTT 62.597 66.667 5.97 0.00 46.17 3.67
5510 6027 4.767255 GGAGAGCAGTGGCCCGTG 62.767 72.222 0.00 0.00 42.56 4.94
5516 6033 3.551496 TTTGCCGGGAGAGCAGTGG 62.551 63.158 2.18 0.00 42.17 4.00
5517 6034 0.962356 ATTTTGCCGGGAGAGCAGTG 60.962 55.000 2.18 0.00 42.17 3.66
5518 6035 0.251341 AATTTTGCCGGGAGAGCAGT 60.251 50.000 2.18 0.00 42.17 4.40
5519 6036 1.750193 TAATTTTGCCGGGAGAGCAG 58.250 50.000 2.18 0.00 42.17 4.24
5520 6037 2.297701 GATAATTTTGCCGGGAGAGCA 58.702 47.619 2.18 0.00 38.81 4.26
5521 6038 1.609072 GGATAATTTTGCCGGGAGAGC 59.391 52.381 2.18 0.00 0.00 4.09
5522 6039 2.230660 GGGATAATTTTGCCGGGAGAG 58.769 52.381 2.18 0.00 0.00 3.20
5523 6040 1.133606 GGGGATAATTTTGCCGGGAGA 60.134 52.381 2.18 0.00 0.00 3.71
5524 6041 1.328279 GGGGATAATTTTGCCGGGAG 58.672 55.000 2.18 0.00 0.00 4.30
5525 6042 0.631753 TGGGGATAATTTTGCCGGGA 59.368 50.000 2.18 0.00 0.00 5.14
5526 6043 1.490574 TTGGGGATAATTTTGCCGGG 58.509 50.000 2.18 0.00 0.00 5.73
5527 6044 2.234908 TGTTTGGGGATAATTTTGCCGG 59.765 45.455 0.00 0.00 0.00 6.13
5528 6045 3.601443 TGTTTGGGGATAATTTTGCCG 57.399 42.857 0.56 0.00 0.00 5.69
5529 6046 6.619744 CAAAATGTTTGGGGATAATTTTGCC 58.380 36.000 6.31 0.00 39.77 4.52
5531 6048 7.083230 GTGCAAAATGTTTGGGGATAATTTTG 58.917 34.615 12.51 12.51 44.92 2.44
5532 6049 6.208402 GGTGCAAAATGTTTGGGGATAATTTT 59.792 34.615 0.00 0.00 32.20 1.82
5533 6050 5.709631 GGTGCAAAATGTTTGGGGATAATTT 59.290 36.000 0.00 0.00 0.00 1.82
5534 6051 5.252547 GGTGCAAAATGTTTGGGGATAATT 58.747 37.500 0.00 0.00 0.00 1.40
5535 6052 4.324176 GGGTGCAAAATGTTTGGGGATAAT 60.324 41.667 0.00 0.00 0.00 1.28
5536 6053 3.008485 GGGTGCAAAATGTTTGGGGATAA 59.992 43.478 0.00 0.00 0.00 1.75
5537 6054 2.569404 GGGTGCAAAATGTTTGGGGATA 59.431 45.455 0.00 0.00 0.00 2.59
5538 6055 1.350684 GGGTGCAAAATGTTTGGGGAT 59.649 47.619 0.00 0.00 0.00 3.85
5539 6056 0.761802 GGGTGCAAAATGTTTGGGGA 59.238 50.000 0.00 0.00 0.00 4.81
5540 6057 0.602372 CGGGTGCAAAATGTTTGGGG 60.602 55.000 0.00 0.00 0.00 4.96
5541 6058 1.227342 GCGGGTGCAAAATGTTTGGG 61.227 55.000 0.00 0.00 42.15 4.12
5542 6059 2.233681 GCGGGTGCAAAATGTTTGG 58.766 52.632 0.00 0.00 42.15 3.28
5553 6070 1.594194 TTGTGGATGATTGCGGGTGC 61.594 55.000 0.00 0.00 43.20 5.01
5554 6071 0.171007 GTTGTGGATGATTGCGGGTG 59.829 55.000 0.00 0.00 0.00 4.61
5555 6072 0.965363 GGTTGTGGATGATTGCGGGT 60.965 55.000 0.00 0.00 0.00 5.28
5556 6073 0.680921 AGGTTGTGGATGATTGCGGG 60.681 55.000 0.00 0.00 0.00 6.13
5557 6074 1.135315 CAAGGTTGTGGATGATTGCGG 60.135 52.381 0.00 0.00 0.00 5.69
5558 6075 1.733389 GCAAGGTTGTGGATGATTGCG 60.733 52.381 0.00 0.00 34.40 4.85
5559 6076 1.404583 GGCAAGGTTGTGGATGATTGC 60.405 52.381 0.00 0.00 41.67 3.56
5560 6077 2.165030 GAGGCAAGGTTGTGGATGATTG 59.835 50.000 0.00 0.00 0.00 2.67
5561 6078 2.450476 GAGGCAAGGTTGTGGATGATT 58.550 47.619 0.00 0.00 0.00 2.57
5562 6079 1.341383 GGAGGCAAGGTTGTGGATGAT 60.341 52.381 0.00 0.00 0.00 2.45
5563 6080 0.038166 GGAGGCAAGGTTGTGGATGA 59.962 55.000 0.00 0.00 0.00 2.92
5564 6081 0.967380 GGGAGGCAAGGTTGTGGATG 60.967 60.000 0.00 0.00 0.00 3.51
5565 6082 1.384191 GGGAGGCAAGGTTGTGGAT 59.616 57.895 0.00 0.00 0.00 3.41
5566 6083 2.843545 GGGAGGCAAGGTTGTGGA 59.156 61.111 0.00 0.00 0.00 4.02
5567 6084 2.672996 CGGGAGGCAAGGTTGTGG 60.673 66.667 0.00 0.00 0.00 4.17
5568 6085 1.106944 AAACGGGAGGCAAGGTTGTG 61.107 55.000 0.00 0.00 0.00 3.33
5569 6086 1.106944 CAAACGGGAGGCAAGGTTGT 61.107 55.000 0.00 0.00 0.00 3.32
5570 6087 0.821711 TCAAACGGGAGGCAAGGTTG 60.822 55.000 0.00 0.00 0.00 3.77
5571 6088 0.112412 ATCAAACGGGAGGCAAGGTT 59.888 50.000 0.00 0.00 0.00 3.50
5572 6089 0.609131 CATCAAACGGGAGGCAAGGT 60.609 55.000 0.00 0.00 0.00 3.50
5573 6090 0.609131 ACATCAAACGGGAGGCAAGG 60.609 55.000 0.00 0.00 0.00 3.61
5574 6091 1.247567 AACATCAAACGGGAGGCAAG 58.752 50.000 0.00 0.00 0.00 4.01
5575 6092 1.698506 AAACATCAAACGGGAGGCAA 58.301 45.000 0.00 0.00 0.00 4.52
5576 6093 1.611491 GAAAACATCAAACGGGAGGCA 59.389 47.619 0.00 0.00 0.00 4.75
5577 6094 1.886542 AGAAAACATCAAACGGGAGGC 59.113 47.619 0.00 0.00 0.00 4.70
5578 6095 3.127030 GCTAGAAAACATCAAACGGGAGG 59.873 47.826 0.00 0.00 0.00 4.30
5579 6096 3.751175 TGCTAGAAAACATCAAACGGGAG 59.249 43.478 0.00 0.00 0.00 4.30
5580 6097 3.745799 TGCTAGAAAACATCAAACGGGA 58.254 40.909 0.00 0.00 0.00 5.14
5581 6098 3.119849 CCTGCTAGAAAACATCAAACGGG 60.120 47.826 0.00 0.00 0.00 5.28
5582 6099 3.751175 TCCTGCTAGAAAACATCAAACGG 59.249 43.478 0.00 0.00 0.00 4.44
5583 6100 4.378459 GGTCCTGCTAGAAAACATCAAACG 60.378 45.833 0.00 0.00 0.00 3.60
5584 6101 4.518970 TGGTCCTGCTAGAAAACATCAAAC 59.481 41.667 0.00 0.00 0.00 2.93
5585 6102 4.724399 TGGTCCTGCTAGAAAACATCAAA 58.276 39.130 0.00 0.00 0.00 2.69
5586 6103 4.365514 TGGTCCTGCTAGAAAACATCAA 57.634 40.909 0.00 0.00 0.00 2.57
5587 6104 4.365514 TTGGTCCTGCTAGAAAACATCA 57.634 40.909 0.00 0.00 0.00 3.07
5588 6105 4.379918 GCTTTGGTCCTGCTAGAAAACATC 60.380 45.833 0.00 0.00 0.00 3.06
5589 6106 3.507622 GCTTTGGTCCTGCTAGAAAACAT 59.492 43.478 0.00 0.00 0.00 2.71
5590 6107 2.884639 GCTTTGGTCCTGCTAGAAAACA 59.115 45.455 0.00 0.00 0.00 2.83
5591 6108 2.884639 TGCTTTGGTCCTGCTAGAAAAC 59.115 45.455 0.00 0.00 0.00 2.43
5592 6109 3.149196 CTGCTTTGGTCCTGCTAGAAAA 58.851 45.455 0.00 0.00 0.00 2.29
5593 6110 2.553028 CCTGCTTTGGTCCTGCTAGAAA 60.553 50.000 0.00 0.00 0.00 2.52
5594 6111 1.003580 CCTGCTTTGGTCCTGCTAGAA 59.996 52.381 0.00 0.00 0.00 2.10
5595 6112 0.615331 CCTGCTTTGGTCCTGCTAGA 59.385 55.000 0.00 0.00 0.00 2.43
5596 6113 0.615331 TCCTGCTTTGGTCCTGCTAG 59.385 55.000 0.00 0.00 0.00 3.42
5597 6114 0.615331 CTCCTGCTTTGGTCCTGCTA 59.385 55.000 0.00 0.00 0.00 3.49
5598 6115 1.377994 CTCCTGCTTTGGTCCTGCT 59.622 57.895 0.00 0.00 0.00 4.24
5599 6116 1.073897 ACTCCTGCTTTGGTCCTGC 59.926 57.895 0.00 0.00 0.00 4.85
5600 6117 0.607489 CCACTCCTGCTTTGGTCCTG 60.607 60.000 0.00 0.00 0.00 3.86
5601 6118 1.763770 CCACTCCTGCTTTGGTCCT 59.236 57.895 0.00 0.00 0.00 3.85
5602 6119 1.973812 GCCACTCCTGCTTTGGTCC 60.974 63.158 0.00 0.00 32.50 4.46
5603 6120 1.973812 GGCCACTCCTGCTTTGGTC 60.974 63.158 0.00 0.00 32.50 4.02
5604 6121 2.011617 AAGGCCACTCCTGCTTTGGT 62.012 55.000 5.01 0.00 46.94 3.67
5605 6122 1.228675 AAGGCCACTCCTGCTTTGG 60.229 57.895 5.01 0.00 46.94 3.28
5606 6123 0.825010 ACAAGGCCACTCCTGCTTTG 60.825 55.000 5.01 5.68 46.94 2.77
5607 6124 0.106015 AACAAGGCCACTCCTGCTTT 60.106 50.000 5.01 0.00 46.94 3.51
5608 6125 0.106015 AAACAAGGCCACTCCTGCTT 60.106 50.000 5.01 0.00 46.94 3.91
5609 6126 0.538287 GAAACAAGGCCACTCCTGCT 60.538 55.000 5.01 0.00 46.94 4.24
5610 6127 1.856265 CGAAACAAGGCCACTCCTGC 61.856 60.000 5.01 0.00 46.94 4.85
5611 6128 0.535102 ACGAAACAAGGCCACTCCTG 60.535 55.000 5.01 0.00 46.94 3.86
5612 6129 5.323447 TGTTACGAAACAAGGCCACTCCT 62.323 47.826 5.01 0.00 42.60 3.69
5613 6130 1.534163 GTTACGAAACAAGGCCACTCC 59.466 52.381 5.01 0.00 35.56 3.85
5614 6131 2.032290 GTGTTACGAAACAAGGCCACTC 60.032 50.000 5.01 0.00 46.84 3.51
5615 6132 1.944709 GTGTTACGAAACAAGGCCACT 59.055 47.619 5.01 0.00 46.84 4.00
5616 6133 1.944709 AGTGTTACGAAACAAGGCCAC 59.055 47.619 5.01 0.00 46.84 5.01
5617 6134 2.215196 GAGTGTTACGAAACAAGGCCA 58.785 47.619 5.01 0.00 46.84 5.36
5618 6135 1.193874 CGAGTGTTACGAAACAAGGCC 59.806 52.381 0.00 0.00 46.84 5.19
5619 6136 1.193874 CCGAGTGTTACGAAACAAGGC 59.806 52.381 0.00 0.00 46.84 4.35
5620 6137 2.220133 CACCGAGTGTTACGAAACAAGG 59.780 50.000 0.00 0.86 46.84 3.61
5621 6138 2.348218 GCACCGAGTGTTACGAAACAAG 60.348 50.000 0.00 0.00 46.84 3.16
5622 6139 1.593933 GCACCGAGTGTTACGAAACAA 59.406 47.619 0.00 0.00 46.84 2.83
5623 6140 1.210870 GCACCGAGTGTTACGAAACA 58.789 50.000 0.00 0.00 43.32 2.83
5624 6141 1.210870 TGCACCGAGTGTTACGAAAC 58.789 50.000 0.00 0.00 35.75 2.78
5625 6142 2.157834 ATGCACCGAGTGTTACGAAA 57.842 45.000 0.00 0.00 35.75 3.46
5626 6143 2.157834 AATGCACCGAGTGTTACGAA 57.842 45.000 0.00 0.00 35.75 3.85
5627 6144 2.598589 GTAATGCACCGAGTGTTACGA 58.401 47.619 0.00 0.00 35.75 3.43
5628 6145 1.319374 CGTAATGCACCGAGTGTTACG 59.681 52.381 17.07 17.07 39.82 3.18
5629 6146 1.060122 GCGTAATGCACCGAGTGTTAC 59.940 52.381 6.45 0.91 45.45 2.50
5630 6147 1.352114 GCGTAATGCACCGAGTGTTA 58.648 50.000 6.45 0.00 45.45 2.41
5631 6148 2.159181 GCGTAATGCACCGAGTGTT 58.841 52.632 6.45 0.00 45.45 3.32
5632 6149 3.870606 GCGTAATGCACCGAGTGT 58.129 55.556 6.45 0.00 45.45 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.