Multiple sequence alignment - TraesCS6B01G326400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G326400 chr6B 100.000 2276 0 0 1 2276 575928198 575930473 0.000000e+00 4204
1 TraesCS6B01G326400 chr6B 74.237 885 199 29 440 1308 16961588 16960717 6.020000e-91 344
2 TraesCS6B01G326400 chr6B 73.918 878 206 23 440 1305 583193876 583193010 4.690000e-87 331
3 TraesCS6B01G326400 chr3B 95.791 879 34 3 435 1310 65344017 65343139 0.000000e+00 1415
4 TraesCS6B01G326400 chr3B 95.307 618 16 4 1659 2276 139496596 139497200 0.000000e+00 968
5 TraesCS6B01G326400 chr3B 92.611 609 24 4 1668 2276 189437193 189437780 0.000000e+00 856
6 TraesCS6B01G326400 chr3B 81.494 870 145 9 440 1309 811587307 811588160 0.000000e+00 701
7 TraesCS6B01G326400 chr3B 85.000 140 17 4 63 202 805125706 805125841 3.050000e-29 139
8 TraesCS6B01G326400 chr7B 90.378 873 82 2 440 1311 696282000 696282871 0.000000e+00 1146
9 TraesCS6B01G326400 chr7B 95.520 625 19 3 1660 2276 316409439 316410062 0.000000e+00 990
10 TraesCS6B01G326400 chr7B 85.475 179 19 4 24 197 705632624 705632800 1.800000e-41 180
11 TraesCS6B01G326400 chr7B 84.444 180 21 4 24 198 705616155 705616332 1.080000e-38 171
12 TraesCS6B01G326400 chr7B 86.364 154 19 2 222 374 169442148 169442300 1.400000e-37 167
13 TraesCS6B01G326400 chr5B 89.286 868 87 6 440 1305 585749725 585748862 0.000000e+00 1083
14 TraesCS6B01G326400 chr5B 99.500 200 1 0 1 200 519455095 519455294 4.620000e-97 364
15 TraesCS6B01G326400 chr5B 87.681 138 12 5 62 199 657161313 657161181 3.030000e-34 156
16 TraesCS6B01G326400 chr4A 98.730 551 6 1 435 984 45333633 45333083 0.000000e+00 977
17 TraesCS6B01G326400 chr4A 97.251 291 4 1 1019 1305 45333083 45332793 7.310000e-135 490
18 TraesCS6B01G326400 chr3D 85.649 871 117 8 435 1302 108444838 108443973 0.000000e+00 909
19 TraesCS6B01G326400 chr3D 84.977 872 128 3 435 1305 590176031 590176900 0.000000e+00 881
20 TraesCS6B01G326400 chr3D 80.994 342 33 12 1311 1646 512955616 512955301 2.260000e-60 243
21 TraesCS6B01G326400 chr3D 88.158 152 16 2 222 372 512955826 512955676 1.800000e-41 180
22 TraesCS6B01G326400 chr1D 77.918 874 173 16 440 1303 211715037 211714174 5.570000e-146 527
23 TraesCS6B01G326400 chr1D 82.727 220 29 3 1427 1646 468869780 468869990 1.070000e-43 187
24 TraesCS6B01G326400 chr1D 85.119 168 21 4 215 380 76428638 76428803 3.890000e-38 169
25 TraesCS6B01G326400 chr1B 88.564 376 32 9 1661 2028 534758973 534759345 1.600000e-121 446
26 TraesCS6B01G326400 chr1B 97.115 104 3 0 2172 2275 534875388 534875491 2.320000e-40 176
27 TraesCS6B01G326400 chr1B 86.331 139 16 3 61 199 612037284 612037149 5.070000e-32 148
28 TraesCS6B01G326400 chr5D 74.386 855 203 16 458 1304 300324352 300323506 3.600000e-93 351
29 TraesCS6B01G326400 chr5D 82.336 351 36 14 1308 1646 464597266 464597602 4.790000e-72 281
30 TraesCS6B01G326400 chr2D 87.097 310 30 5 1343 1646 22493925 22494230 2.160000e-90 342
31 TraesCS6B01G326400 chr2D 75.207 363 86 4 1896 2257 431380380 431380021 3.890000e-38 169
32 TraesCS6B01G326400 chr2D 74.931 363 90 1 1895 2257 431002473 431002112 5.030000e-37 165
33 TraesCS6B01G326400 chr7D 85.780 218 31 0 1429 1646 107859514 107859297 4.890000e-57 231
34 TraesCS6B01G326400 chr7D 88.199 161 19 0 1486 1646 199845934 199846094 2.310000e-45 193
35 TraesCS6B01G326400 chr7D 87.234 94 10 1 1322 1413 107859658 107859565 3.090000e-19 106
36 TraesCS6B01G326400 chr2B 85.321 218 32 0 1429 1646 31633364 31633581 2.270000e-55 226
37 TraesCS6B01G326400 chr2B 85.315 143 17 4 57 199 207732144 207732006 6.550000e-31 145
38 TraesCS6B01G326400 chr2B 88.043 92 8 2 1322 1410 31633219 31633310 3.090000e-19 106
39 TraesCS6B01G326400 chr2A 85.714 203 24 5 2 202 778140574 778140773 2.290000e-50 209
40 TraesCS6B01G326400 chr4D 82.727 220 29 3 1427 1646 287567738 287567948 1.070000e-43 187
41 TraesCS6B01G326400 chr1A 86.861 137 15 3 63 199 389068084 389067951 1.410000e-32 150
42 TraesCS6B01G326400 chr1A 81.921 177 15 7 1308 1475 77058462 77058630 1.420000e-27 134


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G326400 chr6B 575928198 575930473 2275 False 4204.0 4204 100.0000 1 2276 1 chr6B.!!$F1 2275
1 TraesCS6B01G326400 chr6B 16960717 16961588 871 True 344.0 344 74.2370 440 1308 1 chr6B.!!$R1 868
2 TraesCS6B01G326400 chr6B 583193010 583193876 866 True 331.0 331 73.9180 440 1305 1 chr6B.!!$R2 865
3 TraesCS6B01G326400 chr3B 65343139 65344017 878 True 1415.0 1415 95.7910 435 1310 1 chr3B.!!$R1 875
4 TraesCS6B01G326400 chr3B 139496596 139497200 604 False 968.0 968 95.3070 1659 2276 1 chr3B.!!$F1 617
5 TraesCS6B01G326400 chr3B 189437193 189437780 587 False 856.0 856 92.6110 1668 2276 1 chr3B.!!$F2 608
6 TraesCS6B01G326400 chr3B 811587307 811588160 853 False 701.0 701 81.4940 440 1309 1 chr3B.!!$F4 869
7 TraesCS6B01G326400 chr7B 696282000 696282871 871 False 1146.0 1146 90.3780 440 1311 1 chr7B.!!$F3 871
8 TraesCS6B01G326400 chr7B 316409439 316410062 623 False 990.0 990 95.5200 1660 2276 1 chr7B.!!$F2 616
9 TraesCS6B01G326400 chr5B 585748862 585749725 863 True 1083.0 1083 89.2860 440 1305 1 chr5B.!!$R1 865
10 TraesCS6B01G326400 chr4A 45332793 45333633 840 True 733.5 977 97.9905 435 1305 2 chr4A.!!$R1 870
11 TraesCS6B01G326400 chr3D 108443973 108444838 865 True 909.0 909 85.6490 435 1302 1 chr3D.!!$R1 867
12 TraesCS6B01G326400 chr3D 590176031 590176900 869 False 881.0 881 84.9770 435 1305 1 chr3D.!!$F1 870
13 TraesCS6B01G326400 chr3D 512955301 512955826 525 True 211.5 243 84.5760 222 1646 2 chr3D.!!$R2 1424
14 TraesCS6B01G326400 chr1D 211714174 211715037 863 True 527.0 527 77.9180 440 1303 1 chr1D.!!$R1 863
15 TraesCS6B01G326400 chr5D 300323506 300324352 846 True 351.0 351 74.3860 458 1304 1 chr5D.!!$R1 846


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
177 178 0.315886 TGTATACATACCGGCGCCTG 59.684 55.0 26.68 21.87 32.33 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1515 1621 0.029035 CCAGCTGCAATCTTCATCGC 59.971 55.0 8.66 0.0 0.0 4.58 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.733956 GGGTGGTAAATCAAGCATGGA 58.266 47.619 0.00 0.00 0.00 3.41
21 22 3.096092 GGGTGGTAAATCAAGCATGGAA 58.904 45.455 0.00 0.00 0.00 3.53
22 23 3.706086 GGGTGGTAAATCAAGCATGGAAT 59.294 43.478 0.00 0.00 0.00 3.01
23 24 4.162131 GGGTGGTAAATCAAGCATGGAATT 59.838 41.667 0.00 0.00 0.00 2.17
24 25 5.362430 GGGTGGTAAATCAAGCATGGAATTA 59.638 40.000 0.00 0.00 0.00 1.40
25 26 6.041979 GGGTGGTAAATCAAGCATGGAATTAT 59.958 38.462 0.00 0.00 0.00 1.28
26 27 6.925165 GGTGGTAAATCAAGCATGGAATTATG 59.075 38.462 0.00 0.00 0.00 1.90
27 28 7.201902 GGTGGTAAATCAAGCATGGAATTATGA 60.202 37.037 0.00 0.00 0.00 2.15
28 29 7.864379 GTGGTAAATCAAGCATGGAATTATGAG 59.136 37.037 0.00 0.00 0.00 2.90
29 30 7.560991 TGGTAAATCAAGCATGGAATTATGAGT 59.439 33.333 0.00 0.00 0.00 3.41
30 31 7.864379 GGTAAATCAAGCATGGAATTATGAGTG 59.136 37.037 0.00 0.00 0.00 3.51
31 32 7.649533 AAATCAAGCATGGAATTATGAGTGA 57.350 32.000 0.00 0.00 31.39 3.41
32 33 6.879276 ATCAAGCATGGAATTATGAGTGAG 57.121 37.500 0.00 0.00 30.79 3.51
33 34 5.128205 TCAAGCATGGAATTATGAGTGAGG 58.872 41.667 0.00 0.00 0.00 3.86
34 35 4.785346 AGCATGGAATTATGAGTGAGGT 57.215 40.909 0.00 0.00 0.00 3.85
35 36 4.712476 AGCATGGAATTATGAGTGAGGTC 58.288 43.478 0.00 0.00 0.00 3.85
36 37 4.411540 AGCATGGAATTATGAGTGAGGTCT 59.588 41.667 0.00 0.00 0.00 3.85
37 38 4.754114 GCATGGAATTATGAGTGAGGTCTC 59.246 45.833 0.00 0.00 35.28 3.36
38 39 5.685861 GCATGGAATTATGAGTGAGGTCTCA 60.686 44.000 0.00 0.00 46.39 3.27
39 40 5.604758 TGGAATTATGAGTGAGGTCTCAG 57.395 43.478 0.28 0.00 45.70 3.35
40 41 4.406972 TGGAATTATGAGTGAGGTCTCAGG 59.593 45.833 0.28 0.00 45.70 3.86
41 42 4.407296 GGAATTATGAGTGAGGTCTCAGGT 59.593 45.833 0.28 0.00 45.70 4.00
42 43 5.104735 GGAATTATGAGTGAGGTCTCAGGTT 60.105 44.000 0.28 0.00 45.70 3.50
43 44 5.606348 ATTATGAGTGAGGTCTCAGGTTC 57.394 43.478 0.28 1.45 45.70 3.62
44 45 1.633774 TGAGTGAGGTCTCAGGTTCC 58.366 55.000 0.28 0.00 40.75 3.62
45 46 1.133167 TGAGTGAGGTCTCAGGTTCCA 60.133 52.381 0.28 0.00 40.75 3.53
46 47 1.971357 GAGTGAGGTCTCAGGTTCCAA 59.029 52.381 0.28 0.00 40.75 3.53
47 48 2.569404 GAGTGAGGTCTCAGGTTCCAAT 59.431 50.000 0.28 0.00 40.75 3.16
48 49 2.569404 AGTGAGGTCTCAGGTTCCAATC 59.431 50.000 0.28 0.00 40.75 2.67
49 50 1.909302 TGAGGTCTCAGGTTCCAATCC 59.091 52.381 0.00 0.00 34.14 3.01
50 51 2.192263 GAGGTCTCAGGTTCCAATCCT 58.808 52.381 0.00 0.00 35.45 3.24
51 52 2.573915 GAGGTCTCAGGTTCCAATCCTT 59.426 50.000 0.00 0.00 32.37 3.36
52 53 2.307098 AGGTCTCAGGTTCCAATCCTTG 59.693 50.000 0.00 0.00 32.37 3.61
53 54 2.040412 GGTCTCAGGTTCCAATCCTTGT 59.960 50.000 0.00 0.00 32.37 3.16
54 55 3.263425 GGTCTCAGGTTCCAATCCTTGTA 59.737 47.826 0.00 0.00 32.37 2.41
55 56 4.080299 GGTCTCAGGTTCCAATCCTTGTAT 60.080 45.833 0.00 0.00 32.37 2.29
56 57 5.130477 GGTCTCAGGTTCCAATCCTTGTATA 59.870 44.000 0.00 0.00 32.37 1.47
57 58 6.183361 GGTCTCAGGTTCCAATCCTTGTATAT 60.183 42.308 0.00 0.00 32.37 0.86
58 59 6.931840 GTCTCAGGTTCCAATCCTTGTATATC 59.068 42.308 0.00 0.00 32.37 1.63
59 60 6.043243 TCTCAGGTTCCAATCCTTGTATATCC 59.957 42.308 0.00 0.00 32.37 2.59
60 61 5.073144 TCAGGTTCCAATCCTTGTATATCCC 59.927 44.000 0.00 0.00 32.37 3.85
61 62 5.073691 CAGGTTCCAATCCTTGTATATCCCT 59.926 44.000 0.00 0.00 32.37 4.20
62 63 5.676811 AGGTTCCAATCCTTGTATATCCCTT 59.323 40.000 0.00 0.00 30.18 3.95
63 64 6.162241 AGGTTCCAATCCTTGTATATCCCTTT 59.838 38.462 0.00 0.00 30.18 3.11
64 65 6.839134 GGTTCCAATCCTTGTATATCCCTTTT 59.161 38.462 0.00 0.00 0.00 2.27
65 66 7.344612 GGTTCCAATCCTTGTATATCCCTTTTT 59.655 37.037 0.00 0.00 0.00 1.94
88 89 9.464714 TTTTTGCGTTATAAAAACATAGCAGAA 57.535 25.926 0.00 0.00 33.47 3.02
89 90 8.667987 TTTGCGTTATAAAAACATAGCAGAAG 57.332 30.769 0.00 0.00 34.74 2.85
90 91 7.603963 TGCGTTATAAAAACATAGCAGAAGA 57.396 32.000 0.00 0.00 0.00 2.87
91 92 8.035165 TGCGTTATAAAAACATAGCAGAAGAA 57.965 30.769 0.00 0.00 0.00 2.52
92 93 8.673711 TGCGTTATAAAAACATAGCAGAAGAAT 58.326 29.630 0.00 0.00 0.00 2.40
99 100 7.396540 AAAACATAGCAGAAGAATAACCTGG 57.603 36.000 0.00 0.00 0.00 4.45
100 101 5.041191 ACATAGCAGAAGAATAACCTGGG 57.959 43.478 0.00 0.00 0.00 4.45
101 102 4.141390 ACATAGCAGAAGAATAACCTGGGG 60.141 45.833 0.00 0.00 0.00 4.96
102 103 1.064389 AGCAGAAGAATAACCTGGGGC 60.064 52.381 0.00 0.00 0.00 5.80
103 104 1.340991 GCAGAAGAATAACCTGGGGCA 60.341 52.381 0.00 0.00 0.00 5.36
104 105 2.883888 GCAGAAGAATAACCTGGGGCAA 60.884 50.000 0.00 0.00 0.00 4.52
105 106 2.755103 CAGAAGAATAACCTGGGGCAAC 59.245 50.000 0.00 0.00 0.00 4.17
151 152 4.712425 GCTGCAGGCGCCAGTTTG 62.712 66.667 31.54 19.51 37.32 2.93
152 153 4.712425 CTGCAGGCGCCAGTTTGC 62.712 66.667 31.54 28.67 37.32 3.68
165 166 4.728534 GCCAGTTTGCGAAAATGTATACA 58.271 39.130 8.27 8.27 34.87 2.29
166 167 5.339990 GCCAGTTTGCGAAAATGTATACAT 58.660 37.500 12.75 12.75 34.87 2.29
167 168 6.491394 GCCAGTTTGCGAAAATGTATACATA 58.509 36.000 18.56 0.00 34.87 2.29
168 169 6.413818 GCCAGTTTGCGAAAATGTATACATAC 59.586 38.462 18.56 10.32 34.87 2.39
169 170 6.910433 CCAGTTTGCGAAAATGTATACATACC 59.090 38.462 18.56 9.71 34.87 2.73
170 171 6.627276 CAGTTTGCGAAAATGTATACATACCG 59.373 38.462 18.56 19.86 35.10 4.02
171 172 5.660629 TTGCGAAAATGTATACATACCGG 57.339 39.130 18.56 0.00 35.10 5.28
172 173 3.495377 TGCGAAAATGTATACATACCGGC 59.505 43.478 18.56 18.15 35.10 6.13
173 174 3.422603 GCGAAAATGTATACATACCGGCG 60.423 47.826 18.56 16.88 35.10 6.46
174 175 3.422603 CGAAAATGTATACATACCGGCGC 60.423 47.826 18.56 0.00 35.10 6.53
175 176 2.088950 AATGTATACATACCGGCGCC 57.911 50.000 19.07 19.07 35.10 6.53
176 177 1.263356 ATGTATACATACCGGCGCCT 58.737 50.000 26.68 9.55 34.26 5.52
177 178 0.315886 TGTATACATACCGGCGCCTG 59.684 55.000 26.68 21.87 32.33 4.85
178 179 1.012486 GTATACATACCGGCGCCTGC 61.012 60.000 26.68 2.11 41.71 4.85
179 180 1.465200 TATACATACCGGCGCCTGCA 61.465 55.000 26.68 9.55 45.35 4.41
180 181 2.715532 ATACATACCGGCGCCTGCAG 62.716 60.000 26.68 13.68 45.35 4.41
191 192 1.944778 GCCTGCAGCGCTAAATAGG 59.055 57.895 10.99 16.20 0.00 2.57
192 193 0.532862 GCCTGCAGCGCTAAATAGGA 60.533 55.000 24.15 8.76 0.00 2.94
193 194 1.953559 CCTGCAGCGCTAAATAGGAA 58.046 50.000 10.99 0.00 0.00 3.36
194 195 2.288666 CCTGCAGCGCTAAATAGGAAA 58.711 47.619 10.99 0.00 0.00 3.13
195 196 2.880890 CCTGCAGCGCTAAATAGGAAAT 59.119 45.455 10.99 0.00 0.00 2.17
196 197 3.304257 CCTGCAGCGCTAAATAGGAAATG 60.304 47.826 10.99 0.00 0.00 2.32
197 198 2.033299 TGCAGCGCTAAATAGGAAATGC 59.967 45.455 10.99 6.21 0.00 3.56
198 199 2.605580 GCAGCGCTAAATAGGAAATGCC 60.606 50.000 10.99 0.00 0.00 4.40
199 200 2.030805 CAGCGCTAAATAGGAAATGCCC 60.031 50.000 10.99 0.00 37.37 5.36
200 201 1.269723 GCGCTAAATAGGAAATGCCCC 59.730 52.381 0.00 0.00 37.37 5.80
201 202 2.582052 CGCTAAATAGGAAATGCCCCA 58.418 47.619 0.00 0.00 37.37 4.96
202 203 2.955660 CGCTAAATAGGAAATGCCCCAA 59.044 45.455 0.00 0.00 37.37 4.12
203 204 3.573967 CGCTAAATAGGAAATGCCCCAAT 59.426 43.478 0.00 0.00 37.37 3.16
204 205 4.039124 CGCTAAATAGGAAATGCCCCAATT 59.961 41.667 0.00 0.00 37.37 2.32
205 206 5.453198 CGCTAAATAGGAAATGCCCCAATTT 60.453 40.000 0.00 0.00 37.37 1.82
206 207 6.356556 GCTAAATAGGAAATGCCCCAATTTT 58.643 36.000 0.00 0.00 37.37 1.82
207 208 6.828273 GCTAAATAGGAAATGCCCCAATTTTT 59.172 34.615 0.00 0.00 37.37 1.94
304 305 7.117523 CAGACATGTTAGAATATAAGCAGAGCC 59.882 40.741 0.00 0.00 0.00 4.70
312 313 5.472820 AGAATATAAGCAGAGCCAAGAATGC 59.527 40.000 0.00 0.00 38.97 3.56
315 316 1.848652 AGCAGAGCCAAGAATGCATT 58.151 45.000 12.83 12.83 41.14 3.56
317 318 1.203994 GCAGAGCCAAGAATGCATTGT 59.796 47.619 18.59 10.58 38.54 2.71
328 329 7.315142 CCAAGAATGCATTGTACACTGTATTT 58.685 34.615 23.54 14.24 29.45 1.40
331 332 7.978982 AGAATGCATTGTACACTGTATTTCTC 58.021 34.615 23.54 14.89 29.45 2.87
335 336 5.643777 GCATTGTACACTGTATTTCTCCACT 59.356 40.000 13.98 0.00 0.00 4.00
340 341 3.650942 ACACTGTATTTCTCCACTTGGGA 59.349 43.478 0.00 0.00 45.89 4.37
356 358 6.381801 CACTTGGGATTACAAAAAGTAGCAG 58.618 40.000 0.00 0.00 33.43 4.24
363 365 7.174426 GGGATTACAAAAAGTAGCAGTACAAGT 59.826 37.037 0.00 0.00 33.43 3.16
371 373 4.912586 AGTAGCAGTACAAGTGAGAGAGA 58.087 43.478 0.00 0.00 0.00 3.10
372 374 4.941263 AGTAGCAGTACAAGTGAGAGAGAG 59.059 45.833 0.00 0.00 0.00 3.20
373 375 4.027674 AGCAGTACAAGTGAGAGAGAGA 57.972 45.455 0.00 0.00 0.00 3.10
374 376 4.009675 AGCAGTACAAGTGAGAGAGAGAG 58.990 47.826 0.00 0.00 0.00 3.20
375 377 4.006989 GCAGTACAAGTGAGAGAGAGAGA 58.993 47.826 0.00 0.00 0.00 3.10
376 378 4.094887 GCAGTACAAGTGAGAGAGAGAGAG 59.905 50.000 0.00 0.00 0.00 3.20
377 379 5.487433 CAGTACAAGTGAGAGAGAGAGAGA 58.513 45.833 0.00 0.00 0.00 3.10
378 380 5.582269 CAGTACAAGTGAGAGAGAGAGAGAG 59.418 48.000 0.00 0.00 0.00 3.20
379 381 4.908601 ACAAGTGAGAGAGAGAGAGAGA 57.091 45.455 0.00 0.00 0.00 3.10
380 382 4.836825 ACAAGTGAGAGAGAGAGAGAGAG 58.163 47.826 0.00 0.00 0.00 3.20
381 383 4.532126 ACAAGTGAGAGAGAGAGAGAGAGA 59.468 45.833 0.00 0.00 0.00 3.10
382 384 5.114780 CAAGTGAGAGAGAGAGAGAGAGAG 58.885 50.000 0.00 0.00 0.00 3.20
383 385 3.708631 AGTGAGAGAGAGAGAGAGAGAGG 59.291 52.174 0.00 0.00 0.00 3.69
384 386 3.041211 TGAGAGAGAGAGAGAGAGAGGG 58.959 54.545 0.00 0.00 0.00 4.30
385 387 2.370189 GAGAGAGAGAGAGAGAGAGGGG 59.630 59.091 0.00 0.00 0.00 4.79
391 393 4.051478 AGAGAGAGAGAGAGGGGAATACA 58.949 47.826 0.00 0.00 0.00 2.29
398 400 3.964031 GAGAGAGGGGAATACACAGTCAT 59.036 47.826 0.00 0.00 0.00 3.06
400 402 5.721225 AGAGAGGGGAATACACAGTCATAT 58.279 41.667 0.00 0.00 0.00 1.78
410 412 4.902443 ACACAGTCATATCGAGTACCAG 57.098 45.455 0.00 0.00 0.00 4.00
411 413 4.270834 ACACAGTCATATCGAGTACCAGT 58.729 43.478 0.00 0.00 0.00 4.00
414 429 5.009110 CACAGTCATATCGAGTACCAGTGAT 59.991 44.000 0.00 0.00 0.00 3.06
417 432 4.519350 GTCATATCGAGTACCAGTGATCCA 59.481 45.833 0.00 0.00 0.00 3.41
419 434 3.802948 ATCGAGTACCAGTGATCCAAC 57.197 47.619 0.00 0.00 0.00 3.77
430 445 4.406972 CCAGTGATCCAACATCTAAGGAGA 59.593 45.833 0.00 0.00 34.40 3.71
431 446 5.071519 CCAGTGATCCAACATCTAAGGAGAT 59.928 44.000 0.00 0.00 43.63 2.75
957 974 3.078097 TGAGACACTAGCACTGAGAGAC 58.922 50.000 0.00 0.00 0.00 3.36
958 975 3.244735 TGAGACACTAGCACTGAGAGACT 60.245 47.826 0.00 0.00 0.00 3.24
999 1016 3.738982 TCGTGGTTTCTCACATGTGATT 58.261 40.909 28.00 0.00 39.13 2.57
1322 1428 1.251251 AAAAGATGAGGCAGTGCACC 58.749 50.000 18.61 8.25 0.00 5.01
1323 1429 0.403271 AAAGATGAGGCAGTGCACCT 59.597 50.000 18.61 3.01 41.41 4.00
1324 1430 0.322277 AAGATGAGGCAGTGCACCTG 60.322 55.000 18.61 12.26 44.53 4.00
1325 1431 1.748122 GATGAGGCAGTGCACCTGG 60.748 63.158 18.61 4.69 41.81 4.45
1326 1432 2.475371 GATGAGGCAGTGCACCTGGT 62.475 60.000 18.61 0.00 41.81 4.00
1327 1433 1.200760 ATGAGGCAGTGCACCTGGTA 61.201 55.000 18.61 0.00 41.81 3.25
1328 1434 1.376037 GAGGCAGTGCACCTGGTAC 60.376 63.158 18.61 0.00 41.81 3.34
1329 1435 2.111999 GAGGCAGTGCACCTGGTACA 62.112 60.000 18.61 0.00 41.81 2.90
1330 1436 1.966451 GGCAGTGCACCTGGTACAC 60.966 63.158 20.28 20.28 41.81 2.90
1331 1437 2.317609 GCAGTGCACCTGGTACACG 61.318 63.158 21.31 17.23 41.81 4.49
1332 1438 2.030562 AGTGCACCTGGTACACGC 59.969 61.111 21.31 11.57 35.23 5.34
1333 1439 3.047877 GTGCACCTGGTACACGCC 61.048 66.667 14.08 0.00 31.67 5.68
1334 1440 4.323477 TGCACCTGGTACACGCCC 62.323 66.667 0.00 0.00 0.00 6.13
1335 1441 4.016706 GCACCTGGTACACGCCCT 62.017 66.667 0.00 0.00 0.00 5.19
1336 1442 2.047274 CACCTGGTACACGCCCTG 60.047 66.667 0.00 0.00 0.00 4.45
1337 1443 4.016706 ACCTGGTACACGCCCTGC 62.017 66.667 0.00 0.00 0.00 4.85
1338 1444 4.015406 CCTGGTACACGCCCTGCA 62.015 66.667 0.00 0.00 0.00 4.41
1339 1445 2.268920 CTGGTACACGCCCTGCAT 59.731 61.111 0.00 0.00 0.00 3.96
1340 1446 2.046411 TGGTACACGCCCTGCATG 60.046 61.111 0.00 0.00 0.00 4.06
1341 1447 3.508840 GGTACACGCCCTGCATGC 61.509 66.667 11.82 11.82 0.00 4.06
1342 1448 2.436646 GTACACGCCCTGCATGCT 60.437 61.111 20.33 0.00 0.00 3.79
1343 1449 1.153449 GTACACGCCCTGCATGCTA 60.153 57.895 20.33 4.40 0.00 3.49
1344 1450 1.143838 TACACGCCCTGCATGCTAG 59.856 57.895 20.33 13.98 0.00 3.42
1345 1451 2.923426 TACACGCCCTGCATGCTAGC 62.923 60.000 20.33 16.99 0.00 3.42
1346 1452 3.790437 ACGCCCTGCATGCTAGCT 61.790 61.111 20.33 6.33 34.99 3.32
1347 1453 2.423018 CGCCCTGCATGCTAGCTA 59.577 61.111 20.33 2.58 34.99 3.32
1348 1454 1.667191 CGCCCTGCATGCTAGCTAG 60.667 63.158 20.33 16.84 34.99 3.42
1349 1455 1.449353 GCCCTGCATGCTAGCTAGT 59.551 57.895 21.62 0.00 34.99 2.57
1350 1456 0.681733 GCCCTGCATGCTAGCTAGTA 59.318 55.000 21.62 18.12 34.99 1.82
1351 1457 1.337635 GCCCTGCATGCTAGCTAGTAG 60.338 57.143 21.62 15.70 34.99 2.57
1352 1458 1.274728 CCCTGCATGCTAGCTAGTAGG 59.725 57.143 25.77 25.77 34.99 3.18
1353 1459 1.274728 CCTGCATGCTAGCTAGTAGGG 59.725 57.143 25.34 15.04 34.99 3.53
1354 1460 2.242926 CTGCATGCTAGCTAGTAGGGA 58.757 52.381 22.21 19.16 34.99 4.20
1355 1461 2.230992 CTGCATGCTAGCTAGTAGGGAG 59.769 54.545 25.11 25.11 32.96 4.30
1356 1462 1.548269 GCATGCTAGCTAGTAGGGAGG 59.452 57.143 22.21 8.65 0.00 4.30
1357 1463 1.548269 CATGCTAGCTAGTAGGGAGGC 59.452 57.143 21.62 6.51 0.00 4.70
1358 1464 0.537600 TGCTAGCTAGTAGGGAGGCG 60.538 60.000 21.62 0.00 0.00 5.52
1359 1465 1.245376 GCTAGCTAGTAGGGAGGCGG 61.245 65.000 21.62 0.00 0.00 6.13
1360 1466 1.228490 TAGCTAGTAGGGAGGCGGC 60.228 63.158 0.00 0.00 0.00 6.53
1361 1467 2.003212 TAGCTAGTAGGGAGGCGGCA 62.003 60.000 13.08 0.00 0.00 5.69
1362 1468 3.130227 CTAGTAGGGAGGCGGCAC 58.870 66.667 13.08 4.32 0.00 5.01
1363 1469 1.756950 CTAGTAGGGAGGCGGCACA 60.757 63.158 13.08 0.00 0.00 4.57
1364 1470 1.305465 TAGTAGGGAGGCGGCACAA 60.305 57.895 13.08 0.00 0.00 3.33
1365 1471 1.610554 TAGTAGGGAGGCGGCACAAC 61.611 60.000 13.08 4.73 0.00 3.32
1366 1472 2.925706 TAGGGAGGCGGCACAACA 60.926 61.111 13.08 0.00 0.00 3.33
1367 1473 2.954684 TAGGGAGGCGGCACAACAG 61.955 63.158 13.08 0.00 0.00 3.16
1368 1474 4.329545 GGGAGGCGGCACAACAGA 62.330 66.667 13.08 0.00 0.00 3.41
1369 1475 2.045926 GGAGGCGGCACAACAGAT 60.046 61.111 13.08 0.00 0.00 2.90
1370 1476 1.675641 GGAGGCGGCACAACAGATT 60.676 57.895 13.08 0.00 0.00 2.40
1371 1477 1.244019 GGAGGCGGCACAACAGATTT 61.244 55.000 13.08 0.00 0.00 2.17
1372 1478 0.169009 GAGGCGGCACAACAGATTTC 59.831 55.000 13.08 0.00 0.00 2.17
1373 1479 0.250901 AGGCGGCACAACAGATTTCT 60.251 50.000 13.08 0.00 0.00 2.52
1374 1480 1.003118 AGGCGGCACAACAGATTTCTA 59.997 47.619 13.08 0.00 0.00 2.10
1375 1481 1.810151 GGCGGCACAACAGATTTCTAA 59.190 47.619 3.07 0.00 0.00 2.10
1376 1482 2.414161 GGCGGCACAACAGATTTCTAAC 60.414 50.000 3.07 0.00 0.00 2.34
1377 1483 2.225491 GCGGCACAACAGATTTCTAACA 59.775 45.455 0.00 0.00 0.00 2.41
1378 1484 3.304391 GCGGCACAACAGATTTCTAACAA 60.304 43.478 0.00 0.00 0.00 2.83
1379 1485 4.466828 CGGCACAACAGATTTCTAACAAG 58.533 43.478 0.00 0.00 0.00 3.16
1380 1486 4.213270 CGGCACAACAGATTTCTAACAAGA 59.787 41.667 0.00 0.00 0.00 3.02
1381 1487 5.277779 CGGCACAACAGATTTCTAACAAGAA 60.278 40.000 0.00 0.00 0.00 2.52
1382 1488 6.503524 GGCACAACAGATTTCTAACAAGAAA 58.496 36.000 3.26 3.26 41.33 2.52
1383 1489 6.978080 GGCACAACAGATTTCTAACAAGAAAA 59.022 34.615 4.80 0.00 40.60 2.29
1384 1490 7.653311 GGCACAACAGATTTCTAACAAGAAAAT 59.347 33.333 4.80 0.00 40.60 1.82
1385 1491 9.677567 GCACAACAGATTTCTAACAAGAAAATA 57.322 29.630 4.80 0.00 40.60 1.40
1395 1501 9.887406 TTTCTAACAAGAAAATATCAAACCGTC 57.113 29.630 0.00 0.00 35.17 4.79
1396 1502 8.610248 TCTAACAAGAAAATATCAAACCGTCA 57.390 30.769 0.00 0.00 0.00 4.35
1397 1503 9.058174 TCTAACAAGAAAATATCAAACCGTCAA 57.942 29.630 0.00 0.00 0.00 3.18
1398 1504 7.924103 AACAAGAAAATATCAAACCGTCAAC 57.076 32.000 0.00 0.00 0.00 3.18
1399 1505 7.272037 ACAAGAAAATATCAAACCGTCAACT 57.728 32.000 0.00 0.00 0.00 3.16
1400 1506 7.712797 ACAAGAAAATATCAAACCGTCAACTT 58.287 30.769 0.00 0.00 0.00 2.66
1401 1507 7.647715 ACAAGAAAATATCAAACCGTCAACTTG 59.352 33.333 0.00 0.00 35.93 3.16
1402 1508 7.272037 AGAAAATATCAAACCGTCAACTTGT 57.728 32.000 0.00 0.00 0.00 3.16
1403 1509 7.138736 AGAAAATATCAAACCGTCAACTTGTG 58.861 34.615 0.00 0.00 0.00 3.33
1404 1510 5.371115 AATATCAAACCGTCAACTTGTGG 57.629 39.130 2.45 2.45 0.00 4.17
1405 1511 2.116827 TCAAACCGTCAACTTGTGGT 57.883 45.000 3.50 3.50 35.90 4.16
1406 1512 2.438411 TCAAACCGTCAACTTGTGGTT 58.562 42.857 12.56 12.56 46.26 3.67
1412 1518 5.678132 ACCGTCAACTTGTGGTTTTATAC 57.322 39.130 3.50 0.00 35.74 1.47
1413 1519 5.124645 ACCGTCAACTTGTGGTTTTATACA 58.875 37.500 3.50 0.00 35.74 2.29
1414 1520 5.766174 ACCGTCAACTTGTGGTTTTATACAT 59.234 36.000 3.50 0.00 35.74 2.29
1415 1521 6.083630 CCGTCAACTTGTGGTTTTATACATG 58.916 40.000 0.00 0.00 35.74 3.21
1416 1522 5.567534 CGTCAACTTGTGGTTTTATACATGC 59.432 40.000 0.00 0.00 35.74 4.06
1417 1523 5.861787 GTCAACTTGTGGTTTTATACATGCC 59.138 40.000 0.00 0.00 35.74 4.40
1418 1524 5.772672 TCAACTTGTGGTTTTATACATGCCT 59.227 36.000 0.00 0.00 35.74 4.75
1419 1525 5.643379 ACTTGTGGTTTTATACATGCCTG 57.357 39.130 0.00 0.00 0.00 4.85
1420 1526 5.321102 ACTTGTGGTTTTATACATGCCTGA 58.679 37.500 0.00 0.00 0.00 3.86
1421 1527 5.772672 ACTTGTGGTTTTATACATGCCTGAA 59.227 36.000 0.00 0.00 0.00 3.02
1422 1528 6.266558 ACTTGTGGTTTTATACATGCCTGAAA 59.733 34.615 0.00 0.00 0.00 2.69
1423 1529 6.019779 TGTGGTTTTATACATGCCTGAAAC 57.980 37.500 0.00 0.00 0.00 2.78
1424 1530 5.536538 TGTGGTTTTATACATGCCTGAAACA 59.463 36.000 13.79 1.96 0.00 2.83
1425 1531 6.210385 TGTGGTTTTATACATGCCTGAAACAT 59.790 34.615 13.79 0.00 0.00 2.71
1426 1532 7.394641 TGTGGTTTTATACATGCCTGAAACATA 59.605 33.333 13.79 0.92 0.00 2.29
1427 1533 7.915397 GTGGTTTTATACATGCCTGAAACATAG 59.085 37.037 13.79 0.00 0.00 2.23
1428 1534 7.831690 TGGTTTTATACATGCCTGAAACATAGA 59.168 33.333 13.79 0.00 0.00 1.98
1429 1535 8.129211 GGTTTTATACATGCCTGAAACATAGAC 58.871 37.037 13.79 0.00 0.00 2.59
1430 1536 8.673711 GTTTTATACATGCCTGAAACATAGACA 58.326 33.333 0.00 0.00 0.00 3.41
1431 1537 8.800370 TTTATACATGCCTGAAACATAGACAA 57.200 30.769 0.00 0.00 0.00 3.18
1432 1538 8.978874 TTATACATGCCTGAAACATAGACAAT 57.021 30.769 0.00 0.00 0.00 2.71
1433 1539 7.886629 ATACATGCCTGAAACATAGACAATT 57.113 32.000 0.00 0.00 0.00 2.32
1434 1540 6.594788 ACATGCCTGAAACATAGACAATTT 57.405 33.333 0.00 0.00 0.00 1.82
1435 1541 6.996509 ACATGCCTGAAACATAGACAATTTT 58.003 32.000 0.00 0.00 0.00 1.82
1436 1542 6.869913 ACATGCCTGAAACATAGACAATTTTG 59.130 34.615 0.00 0.00 0.00 2.44
1437 1543 6.403866 TGCCTGAAACATAGACAATTTTGT 57.596 33.333 0.00 0.00 45.65 2.83
1438 1544 6.815089 TGCCTGAAACATAGACAATTTTGTT 58.185 32.000 0.00 0.00 42.43 2.83
1439 1545 6.700960 TGCCTGAAACATAGACAATTTTGTTG 59.299 34.615 0.00 0.00 42.43 3.33
1440 1546 6.701400 GCCTGAAACATAGACAATTTTGTTGT 59.299 34.615 0.00 0.00 42.43 3.32
1441 1547 7.224557 GCCTGAAACATAGACAATTTTGTTGTT 59.775 33.333 6.28 6.28 42.43 2.83
1442 1548 8.542132 CCTGAAACATAGACAATTTTGTTGTTG 58.458 33.333 10.92 6.07 42.43 3.33
1443 1549 9.299963 CTGAAACATAGACAATTTTGTTGTTGA 57.700 29.630 10.92 3.63 42.43 3.18
1444 1550 9.814899 TGAAACATAGACAATTTTGTTGTTGAT 57.185 25.926 10.92 0.46 42.43 2.57
1451 1557 8.948853 AGACAATTTTGTTGTTGATATACGTG 57.051 30.769 0.00 0.00 42.43 4.49
1452 1558 8.779303 AGACAATTTTGTTGTTGATATACGTGA 58.221 29.630 0.00 0.00 42.43 4.35
1453 1559 8.948853 ACAATTTTGTTGTTGATATACGTGAG 57.051 30.769 0.00 0.00 38.47 3.51
1454 1560 7.537306 ACAATTTTGTTGTTGATATACGTGAGC 59.463 33.333 0.00 0.00 38.47 4.26
1455 1561 6.546972 TTTTGTTGTTGATATACGTGAGCA 57.453 33.333 0.00 0.00 0.00 4.26
1456 1562 5.524511 TTGTTGTTGATATACGTGAGCAC 57.475 39.130 0.00 0.00 0.00 4.40
1457 1563 4.816392 TGTTGTTGATATACGTGAGCACT 58.184 39.130 0.00 0.00 0.00 4.40
1458 1564 4.862574 TGTTGTTGATATACGTGAGCACTC 59.137 41.667 0.00 0.00 0.00 3.51
1459 1565 4.712122 TGTTGATATACGTGAGCACTCA 57.288 40.909 0.00 0.00 37.24 3.41
1470 1576 3.678056 TGAGCACTCACCGAAAGTTAT 57.322 42.857 0.00 0.00 34.14 1.89
1471 1577 4.794278 TGAGCACTCACCGAAAGTTATA 57.206 40.909 0.00 0.00 34.14 0.98
1472 1578 4.491676 TGAGCACTCACCGAAAGTTATAC 58.508 43.478 0.00 0.00 34.14 1.47
1473 1579 3.508762 AGCACTCACCGAAAGTTATACG 58.491 45.455 0.00 0.00 0.00 3.06
1474 1580 3.192001 AGCACTCACCGAAAGTTATACGA 59.808 43.478 0.00 0.00 0.00 3.43
1475 1581 3.302699 GCACTCACCGAAAGTTATACGAC 59.697 47.826 0.00 0.00 0.00 4.34
1476 1582 4.478699 CACTCACCGAAAGTTATACGACA 58.521 43.478 0.00 0.00 0.00 4.35
1477 1583 5.100259 CACTCACCGAAAGTTATACGACAT 58.900 41.667 0.00 0.00 0.00 3.06
1478 1584 6.260377 CACTCACCGAAAGTTATACGACATA 58.740 40.000 0.00 0.00 0.00 2.29
1479 1585 6.195983 CACTCACCGAAAGTTATACGACATAC 59.804 42.308 0.00 0.00 0.00 2.39
1480 1586 6.094603 ACTCACCGAAAGTTATACGACATACT 59.905 38.462 0.00 0.00 0.00 2.12
1481 1587 7.280876 ACTCACCGAAAGTTATACGACATACTA 59.719 37.037 0.00 0.00 0.00 1.82
1482 1588 7.409697 TCACCGAAAGTTATACGACATACTAC 58.590 38.462 0.00 0.00 0.00 2.73
1483 1589 6.355405 CACCGAAAGTTATACGACATACTACG 59.645 42.308 0.00 0.00 0.00 3.51
1484 1590 5.338035 CCGAAAGTTATACGACATACTACGC 59.662 44.000 0.00 0.00 0.00 4.42
1485 1591 5.338035 CGAAAGTTATACGACATACTACGCC 59.662 44.000 0.00 0.00 0.00 5.68
1486 1592 4.395581 AGTTATACGACATACTACGCCG 57.604 45.455 0.00 0.00 0.00 6.46
1487 1593 2.880822 TATACGACATACTACGCCGC 57.119 50.000 0.00 0.00 0.00 6.53
1488 1594 0.946528 ATACGACATACTACGCCGCA 59.053 50.000 0.00 0.00 0.00 5.69
1489 1595 0.731994 TACGACATACTACGCCGCAA 59.268 50.000 0.00 0.00 0.00 4.85
1490 1596 0.109179 ACGACATACTACGCCGCAAA 60.109 50.000 0.00 0.00 0.00 3.68
1491 1597 0.993532 CGACATACTACGCCGCAAAA 59.006 50.000 0.00 0.00 0.00 2.44
1492 1598 1.591158 CGACATACTACGCCGCAAAAT 59.409 47.619 0.00 0.00 0.00 1.82
1493 1599 2.347292 CGACATACTACGCCGCAAAATC 60.347 50.000 0.00 0.00 0.00 2.17
1494 1600 2.605818 GACATACTACGCCGCAAAATCA 59.394 45.455 0.00 0.00 0.00 2.57
1495 1601 2.607635 ACATACTACGCCGCAAAATCAG 59.392 45.455 0.00 0.00 0.00 2.90
1496 1602 1.647346 TACTACGCCGCAAAATCAGG 58.353 50.000 0.00 0.00 0.00 3.86
1497 1603 0.321298 ACTACGCCGCAAAATCAGGT 60.321 50.000 0.00 0.00 0.00 4.00
1498 1604 0.373716 CTACGCCGCAAAATCAGGTC 59.626 55.000 0.00 0.00 0.00 3.85
1499 1605 1.022451 TACGCCGCAAAATCAGGTCC 61.022 55.000 0.00 0.00 0.00 4.46
1500 1606 2.040544 CGCCGCAAAATCAGGTCCT 61.041 57.895 0.00 0.00 0.00 3.85
1501 1607 0.742990 CGCCGCAAAATCAGGTCCTA 60.743 55.000 0.00 0.00 0.00 2.94
1502 1608 0.733150 GCCGCAAAATCAGGTCCTAC 59.267 55.000 0.00 0.00 0.00 3.18
1503 1609 1.006832 CCGCAAAATCAGGTCCTACG 58.993 55.000 0.00 0.00 0.00 3.51
1504 1610 1.006832 CGCAAAATCAGGTCCTACGG 58.993 55.000 0.00 0.00 0.00 4.02
1505 1611 0.733150 GCAAAATCAGGTCCTACGGC 59.267 55.000 0.00 0.00 0.00 5.68
1506 1612 1.948611 GCAAAATCAGGTCCTACGGCA 60.949 52.381 0.00 0.00 0.00 5.69
1507 1613 2.432444 CAAAATCAGGTCCTACGGCAA 58.568 47.619 0.00 0.00 0.00 4.52
1508 1614 2.109425 AAATCAGGTCCTACGGCAAC 57.891 50.000 0.00 0.00 0.00 4.17
1509 1615 0.981183 AATCAGGTCCTACGGCAACA 59.019 50.000 0.00 0.00 0.00 3.33
1510 1616 0.249398 ATCAGGTCCTACGGCAACAC 59.751 55.000 0.00 0.00 0.00 3.32
1511 1617 1.375523 CAGGTCCTACGGCAACACC 60.376 63.158 0.00 0.00 0.00 4.16
1520 1626 4.147322 GGCAACACCGACGCGATG 62.147 66.667 15.93 8.05 0.00 3.84
1521 1627 3.109547 GCAACACCGACGCGATGA 61.110 61.111 15.93 0.00 0.00 2.92
1522 1628 2.663478 GCAACACCGACGCGATGAA 61.663 57.895 15.93 0.00 0.00 2.57
1523 1629 1.416049 CAACACCGACGCGATGAAG 59.584 57.895 15.93 1.55 0.00 3.02
1524 1630 1.006825 CAACACCGACGCGATGAAGA 61.007 55.000 15.93 0.00 0.00 2.87
1525 1631 0.108804 AACACCGACGCGATGAAGAT 60.109 50.000 15.93 0.00 0.00 2.40
1526 1632 0.108804 ACACCGACGCGATGAAGATT 60.109 50.000 15.93 0.00 0.00 2.40
1527 1633 0.298707 CACCGACGCGATGAAGATTG 59.701 55.000 15.93 0.00 0.00 2.67
1528 1634 1.273887 CCGACGCGATGAAGATTGC 59.726 57.895 15.93 0.00 35.80 3.56
1529 1635 1.420641 CCGACGCGATGAAGATTGCA 61.421 55.000 15.93 0.00 38.76 4.08
1530 1636 0.043566 CGACGCGATGAAGATTGCAG 60.044 55.000 15.93 0.00 38.76 4.41
1531 1637 0.315706 GACGCGATGAAGATTGCAGC 60.316 55.000 15.93 0.00 38.76 5.25
1532 1638 0.742281 ACGCGATGAAGATTGCAGCT 60.742 50.000 15.93 0.00 38.76 4.24
1533 1639 0.315951 CGCGATGAAGATTGCAGCTG 60.316 55.000 10.11 10.11 38.76 4.24
1534 1640 0.029035 GCGATGAAGATTGCAGCTGG 59.971 55.000 17.12 0.00 38.70 4.85
1535 1641 0.029035 CGATGAAGATTGCAGCTGGC 59.971 55.000 17.12 8.54 45.13 4.85
1548 1654 3.935315 GCAGCTGGCATGAGATATAAGA 58.065 45.455 17.12 0.00 43.97 2.10
1549 1655 3.683822 GCAGCTGGCATGAGATATAAGAC 59.316 47.826 17.12 0.00 43.97 3.01
1550 1656 4.563168 GCAGCTGGCATGAGATATAAGACT 60.563 45.833 17.12 0.00 43.97 3.24
1551 1657 5.337089 GCAGCTGGCATGAGATATAAGACTA 60.337 44.000 17.12 0.00 43.97 2.59
1552 1658 6.629963 GCAGCTGGCATGAGATATAAGACTAT 60.630 42.308 17.12 0.00 43.97 2.12
1553 1659 7.417229 GCAGCTGGCATGAGATATAAGACTATA 60.417 40.741 17.12 0.00 43.97 1.31
1554 1660 8.136800 CAGCTGGCATGAGATATAAGACTATAG 58.863 40.741 5.57 0.00 0.00 1.31
1555 1661 7.287466 AGCTGGCATGAGATATAAGACTATAGG 59.713 40.741 4.43 0.00 0.00 2.57
1601 1707 2.751436 CATCCGGTGTTGGCCCTG 60.751 66.667 0.00 0.00 0.00 4.45
1632 1738 1.267806 TCTCGTTTGACACCGACCTAC 59.732 52.381 0.00 0.00 0.00 3.18
1633 1739 1.001048 CTCGTTTGACACCGACCTACA 60.001 52.381 0.00 0.00 0.00 2.74
1646 1752 0.998928 ACCTACATGACCCATTGGCA 59.001 50.000 0.00 0.00 33.59 4.92
1647 1753 1.064463 ACCTACATGACCCATTGGCAG 60.064 52.381 0.00 0.00 33.59 4.85
1648 1754 1.683943 CTACATGACCCATTGGCAGG 58.316 55.000 0.00 0.00 33.59 4.85
1649 1755 0.395586 TACATGACCCATTGGCAGGC 60.396 55.000 0.00 0.00 33.59 4.85
1650 1756 1.380785 CATGACCCATTGGCAGGCT 60.381 57.895 0.00 0.00 33.59 4.58
1651 1757 0.974010 CATGACCCATTGGCAGGCTT 60.974 55.000 0.00 0.00 33.59 4.35
1652 1758 0.974010 ATGACCCATTGGCAGGCTTG 60.974 55.000 0.00 0.00 33.59 4.01
1653 1759 1.304381 GACCCATTGGCAGGCTTGA 60.304 57.895 0.00 0.00 33.59 3.02
1654 1760 1.304713 ACCCATTGGCAGGCTTGAG 60.305 57.895 0.00 0.00 33.59 3.02
1655 1761 1.000521 CCCATTGGCAGGCTTGAGA 60.001 57.895 0.00 0.00 0.00 3.27
1656 1762 1.318158 CCCATTGGCAGGCTTGAGAC 61.318 60.000 0.00 0.00 0.00 3.36
1657 1763 1.651240 CCATTGGCAGGCTTGAGACG 61.651 60.000 0.00 0.00 0.00 4.18
1712 1818 2.647680 TTTCCCGTCGCCGTTGAGTT 62.648 55.000 0.00 0.00 0.00 3.01
1810 1916 2.739996 CCTTCTGCCCAGCCTCGAT 61.740 63.158 0.00 0.00 0.00 3.59
1820 1926 0.603707 CAGCCTCGATGTGTGTTGGT 60.604 55.000 0.00 0.00 0.00 3.67
1833 1939 2.440253 TGTGTTGGTAGCTAGGGTTTGT 59.560 45.455 0.00 0.00 0.00 2.83
1910 2016 1.000486 GGAGGAGGGGAAAAAGGGC 60.000 63.158 0.00 0.00 0.00 5.19
2016 2122 2.020720 CAGCTAGAGAAGGAGAAGCGA 58.979 52.381 0.00 0.00 38.23 4.93
2073 2179 1.592064 TCAGTGCAGATGCGTTCAAA 58.408 45.000 0.00 0.00 45.83 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.715657 TCATAATTCCATGCTTGATTTACCAC 58.284 34.615 0.22 0.00 0.00 4.16
3 4 7.560991 ACTCATAATTCCATGCTTGATTTACCA 59.439 33.333 0.22 0.00 0.00 3.25
5 6 8.623903 TCACTCATAATTCCATGCTTGATTTAC 58.376 33.333 0.22 0.00 0.00 2.01
6 7 8.750515 TCACTCATAATTCCATGCTTGATTTA 57.249 30.769 0.22 0.00 0.00 1.40
7 8 7.201884 CCTCACTCATAATTCCATGCTTGATTT 60.202 37.037 0.22 0.00 0.00 2.17
8 9 6.264744 CCTCACTCATAATTCCATGCTTGATT 59.735 38.462 0.22 0.00 0.00 2.57
9 10 5.768662 CCTCACTCATAATTCCATGCTTGAT 59.231 40.000 0.22 0.00 0.00 2.57
10 11 5.128205 CCTCACTCATAATTCCATGCTTGA 58.872 41.667 0.22 0.00 0.00 3.02
11 12 4.885907 ACCTCACTCATAATTCCATGCTTG 59.114 41.667 0.00 0.00 0.00 4.01
12 13 5.104193 AGACCTCACTCATAATTCCATGCTT 60.104 40.000 0.00 0.00 0.00 3.91
13 14 4.411540 AGACCTCACTCATAATTCCATGCT 59.588 41.667 0.00 0.00 0.00 3.79
14 15 4.712476 AGACCTCACTCATAATTCCATGC 58.288 43.478 0.00 0.00 0.00 4.06
15 16 5.922053 TGAGACCTCACTCATAATTCCATG 58.078 41.667 0.00 0.00 41.21 3.66
16 17 5.071519 CCTGAGACCTCACTCATAATTCCAT 59.928 44.000 0.00 0.00 44.32 3.41
17 18 4.406972 CCTGAGACCTCACTCATAATTCCA 59.593 45.833 0.00 0.00 44.32 3.53
18 19 4.407296 ACCTGAGACCTCACTCATAATTCC 59.593 45.833 0.00 0.00 44.32 3.01
19 20 5.606348 ACCTGAGACCTCACTCATAATTC 57.394 43.478 0.00 0.00 44.32 2.17
20 21 5.104735 GGAACCTGAGACCTCACTCATAATT 60.105 44.000 0.00 0.00 44.32 1.40
21 22 4.407296 GGAACCTGAGACCTCACTCATAAT 59.593 45.833 0.00 0.00 44.32 1.28
22 23 3.769844 GGAACCTGAGACCTCACTCATAA 59.230 47.826 0.00 0.00 44.32 1.90
23 24 3.245622 TGGAACCTGAGACCTCACTCATA 60.246 47.826 0.00 0.00 44.32 2.15
24 25 2.183679 GGAACCTGAGACCTCACTCAT 58.816 52.381 0.00 0.00 44.32 2.90
25 26 1.133167 TGGAACCTGAGACCTCACTCA 60.133 52.381 0.00 0.00 43.39 3.41
26 27 1.633774 TGGAACCTGAGACCTCACTC 58.366 55.000 0.00 0.00 35.46 3.51
27 28 2.103153 TTGGAACCTGAGACCTCACT 57.897 50.000 0.00 0.00 35.46 3.41
28 29 2.355209 GGATTGGAACCTGAGACCTCAC 60.355 54.545 0.00 0.00 35.46 3.51
29 30 1.909302 GGATTGGAACCTGAGACCTCA 59.091 52.381 0.00 0.00 38.06 3.86
30 31 2.192263 AGGATTGGAACCTGAGACCTC 58.808 52.381 0.00 0.00 36.30 3.85
31 32 2.307098 CAAGGATTGGAACCTGAGACCT 59.693 50.000 0.00 0.00 43.94 3.85
32 33 2.716217 CAAGGATTGGAACCTGAGACC 58.284 52.381 0.00 0.00 43.94 3.85
62 63 9.464714 TTCTGCTATGTTTTTATAACGCAAAAA 57.535 25.926 0.00 0.00 33.61 1.94
63 64 9.123709 CTTCTGCTATGTTTTTATAACGCAAAA 57.876 29.630 0.00 0.00 0.00 2.44
64 65 8.508062 TCTTCTGCTATGTTTTTATAACGCAAA 58.492 29.630 0.00 0.00 0.00 3.68
65 66 8.035165 TCTTCTGCTATGTTTTTATAACGCAA 57.965 30.769 0.00 0.00 0.00 4.85
66 67 7.603963 TCTTCTGCTATGTTTTTATAACGCA 57.396 32.000 0.00 0.00 0.00 5.24
73 74 8.956426 CCAGGTTATTCTTCTGCTATGTTTTTA 58.044 33.333 0.00 0.00 0.00 1.52
74 75 7.093771 CCCAGGTTATTCTTCTGCTATGTTTTT 60.094 37.037 0.00 0.00 0.00 1.94
75 76 6.378280 CCCAGGTTATTCTTCTGCTATGTTTT 59.622 38.462 0.00 0.00 0.00 2.43
76 77 5.888161 CCCAGGTTATTCTTCTGCTATGTTT 59.112 40.000 0.00 0.00 0.00 2.83
77 78 5.440610 CCCAGGTTATTCTTCTGCTATGTT 58.559 41.667 0.00 0.00 0.00 2.71
78 79 4.141390 CCCCAGGTTATTCTTCTGCTATGT 60.141 45.833 0.00 0.00 0.00 2.29
79 80 4.392940 CCCCAGGTTATTCTTCTGCTATG 58.607 47.826 0.00 0.00 0.00 2.23
80 81 3.181439 GCCCCAGGTTATTCTTCTGCTAT 60.181 47.826 0.00 0.00 0.00 2.97
81 82 2.172717 GCCCCAGGTTATTCTTCTGCTA 59.827 50.000 0.00 0.00 0.00 3.49
82 83 1.064389 GCCCCAGGTTATTCTTCTGCT 60.064 52.381 0.00 0.00 0.00 4.24
83 84 1.340991 TGCCCCAGGTTATTCTTCTGC 60.341 52.381 0.00 0.00 0.00 4.26
84 85 2.755103 GTTGCCCCAGGTTATTCTTCTG 59.245 50.000 0.00 0.00 0.00 3.02
85 86 2.291605 GGTTGCCCCAGGTTATTCTTCT 60.292 50.000 0.00 0.00 0.00 2.85
86 87 2.100197 GGTTGCCCCAGGTTATTCTTC 58.900 52.381 0.00 0.00 0.00 2.87
87 88 2.231716 GGTTGCCCCAGGTTATTCTT 57.768 50.000 0.00 0.00 0.00 2.52
134 135 4.712425 CAAACTGGCGCCTGCAGC 62.712 66.667 30.79 2.31 45.35 5.25
135 136 4.712425 GCAAACTGGCGCCTGCAG 62.712 66.667 30.79 20.95 45.35 4.41
141 142 9.974897 TATGTATACATTTTCGCAAACTGGCGC 62.975 40.741 22.90 0.00 45.48 6.53
142 143 5.955005 ATGTATACATTTTCGCAAACTGGCG 60.955 40.000 12.75 0.44 45.67 5.69
143 144 4.728534 TGTATACATTTTCGCAAACTGGC 58.271 39.130 0.08 0.00 0.00 4.85
144 145 6.910433 GGTATGTATACATTTTCGCAAACTGG 59.090 38.462 22.90 0.00 37.76 4.00
145 146 6.627276 CGGTATGTATACATTTTCGCAAACTG 59.373 38.462 22.90 13.19 37.76 3.16
146 147 6.238266 CCGGTATGTATACATTTTCGCAAACT 60.238 38.462 22.90 0.00 37.76 2.66
147 148 5.905181 CCGGTATGTATACATTTTCGCAAAC 59.095 40.000 22.90 12.15 37.76 2.93
148 149 5.504337 GCCGGTATGTATACATTTTCGCAAA 60.504 40.000 22.90 0.17 37.76 3.68
149 150 4.024725 GCCGGTATGTATACATTTTCGCAA 60.025 41.667 22.90 0.92 37.76 4.85
150 151 3.495377 GCCGGTATGTATACATTTTCGCA 59.505 43.478 22.90 1.66 37.76 5.10
151 152 3.422603 CGCCGGTATGTATACATTTTCGC 60.423 47.826 22.90 17.24 37.76 4.70
152 153 3.422603 GCGCCGGTATGTATACATTTTCG 60.423 47.826 22.90 20.68 37.76 3.46
153 154 3.120442 GGCGCCGGTATGTATACATTTTC 60.120 47.826 22.90 13.42 37.76 2.29
154 155 2.809696 GGCGCCGGTATGTATACATTTT 59.190 45.455 22.90 3.15 37.76 1.82
155 156 2.038033 AGGCGCCGGTATGTATACATTT 59.962 45.455 22.90 3.91 37.76 2.32
156 157 1.621814 AGGCGCCGGTATGTATACATT 59.378 47.619 22.90 8.14 37.76 2.71
157 158 1.067142 CAGGCGCCGGTATGTATACAT 60.067 52.381 23.20 21.57 40.22 2.29
158 159 0.315886 CAGGCGCCGGTATGTATACA 59.684 55.000 23.20 8.27 34.98 2.29
159 160 1.012486 GCAGGCGCCGGTATGTATAC 61.012 60.000 27.43 4.61 0.00 1.47
160 161 1.290955 GCAGGCGCCGGTATGTATA 59.709 57.895 27.43 0.00 0.00 1.47
161 162 2.030562 GCAGGCGCCGGTATGTAT 59.969 61.111 27.43 0.79 0.00 2.29
162 163 3.439513 CTGCAGGCGCCGGTATGTA 62.440 63.158 27.43 15.61 37.32 2.29
163 164 4.838152 CTGCAGGCGCCGGTATGT 62.838 66.667 27.43 2.54 37.32 2.29
173 174 0.532862 TCCTATTTAGCGCTGCAGGC 60.533 55.000 22.90 16.82 37.64 4.85
174 175 1.953559 TTCCTATTTAGCGCTGCAGG 58.046 50.000 22.90 19.48 0.00 4.85
175 176 3.851105 GCATTTCCTATTTAGCGCTGCAG 60.851 47.826 22.90 10.11 0.00 4.41
176 177 2.033299 GCATTTCCTATTTAGCGCTGCA 59.967 45.455 22.90 6.48 0.00 4.41
177 178 2.605580 GGCATTTCCTATTTAGCGCTGC 60.606 50.000 22.90 10.93 0.00 5.25
178 179 2.030805 GGGCATTTCCTATTTAGCGCTG 60.031 50.000 22.90 1.61 34.39 5.18
179 180 2.230660 GGGCATTTCCTATTTAGCGCT 58.769 47.619 17.26 17.26 34.39 5.92
180 181 1.269723 GGGGCATTTCCTATTTAGCGC 59.730 52.381 0.00 0.00 34.39 5.92
181 182 2.582052 TGGGGCATTTCCTATTTAGCG 58.418 47.619 0.00 0.00 34.39 4.26
182 183 5.551305 AATTGGGGCATTTCCTATTTAGC 57.449 39.130 0.00 0.00 34.39 3.09
206 207 9.935241 TCCATTATTAAAGCAATGTAAAGCAAA 57.065 25.926 0.00 0.00 31.52 3.68
207 208 9.935241 TTCCATTATTAAAGCAATGTAAAGCAA 57.065 25.926 0.00 0.00 31.52 3.91
214 215 9.193806 AGTCAGATTCCATTATTAAAGCAATGT 57.806 29.630 0.00 0.00 31.52 2.71
217 218 9.905713 ACTAGTCAGATTCCATTATTAAAGCAA 57.094 29.630 0.00 0.00 0.00 3.91
218 219 9.330063 CACTAGTCAGATTCCATTATTAAAGCA 57.670 33.333 0.00 0.00 0.00 3.91
219 220 9.331282 ACACTAGTCAGATTCCATTATTAAAGC 57.669 33.333 0.00 0.00 0.00 3.51
280 281 6.931281 TGGCTCTGCTTATATTCTAACATGTC 59.069 38.462 0.00 0.00 0.00 3.06
282 283 7.658982 TCTTGGCTCTGCTTATATTCTAACATG 59.341 37.037 0.00 0.00 0.00 3.21
304 305 8.239314 AGAAATACAGTGTACAATGCATTCTTG 58.761 33.333 22.40 2.56 28.63 3.02
312 313 7.361201 CCAAGTGGAGAAATACAGTGTACAATG 60.361 40.741 21.02 21.02 37.39 2.82
315 316 5.512404 CCCAAGTGGAGAAATACAGTGTACA 60.512 44.000 4.80 0.00 37.39 2.90
317 318 4.841813 TCCCAAGTGGAGAAATACAGTGTA 59.158 41.667 5.24 5.24 38.61 2.90
331 332 5.242838 TGCTACTTTTTGTAATCCCAAGTGG 59.757 40.000 0.00 0.00 0.00 4.00
335 336 6.999272 TGTACTGCTACTTTTTGTAATCCCAA 59.001 34.615 0.00 0.00 0.00 4.12
340 341 8.671384 TCACTTGTACTGCTACTTTTTGTAAT 57.329 30.769 0.00 0.00 0.00 1.89
356 358 5.730550 TCTCTCTCTCTCTCTCACTTGTAC 58.269 45.833 0.00 0.00 0.00 2.90
363 365 3.041211 CCCTCTCTCTCTCTCTCTCTCA 58.959 54.545 0.00 0.00 0.00 3.27
371 373 3.529734 TGTGTATTCCCCTCTCTCTCTCT 59.470 47.826 0.00 0.00 0.00 3.10
372 374 3.888930 CTGTGTATTCCCCTCTCTCTCTC 59.111 52.174 0.00 0.00 0.00 3.20
373 375 3.270960 ACTGTGTATTCCCCTCTCTCTCT 59.729 47.826 0.00 0.00 0.00 3.10
374 376 3.634910 GACTGTGTATTCCCCTCTCTCTC 59.365 52.174 0.00 0.00 0.00 3.20
375 377 3.011821 TGACTGTGTATTCCCCTCTCTCT 59.988 47.826 0.00 0.00 0.00 3.10
376 378 3.366396 TGACTGTGTATTCCCCTCTCTC 58.634 50.000 0.00 0.00 0.00 3.20
377 379 3.474798 TGACTGTGTATTCCCCTCTCT 57.525 47.619 0.00 0.00 0.00 3.10
378 380 5.336055 CGATATGACTGTGTATTCCCCTCTC 60.336 48.000 0.00 0.00 0.00 3.20
379 381 4.524714 CGATATGACTGTGTATTCCCCTCT 59.475 45.833 0.00 0.00 0.00 3.69
380 382 4.523173 TCGATATGACTGTGTATTCCCCTC 59.477 45.833 0.00 0.00 0.00 4.30
381 383 4.480115 TCGATATGACTGTGTATTCCCCT 58.520 43.478 0.00 0.00 0.00 4.79
382 384 4.281182 ACTCGATATGACTGTGTATTCCCC 59.719 45.833 0.00 0.00 0.00 4.81
383 385 5.455056 ACTCGATATGACTGTGTATTCCC 57.545 43.478 0.00 0.00 0.00 3.97
384 386 6.016527 TGGTACTCGATATGACTGTGTATTCC 60.017 42.308 0.00 0.00 0.00 3.01
385 387 6.967135 TGGTACTCGATATGACTGTGTATTC 58.033 40.000 0.00 0.00 0.00 1.75
391 393 4.524053 TCACTGGTACTCGATATGACTGT 58.476 43.478 0.00 0.00 0.00 3.55
398 400 4.274978 TGTTGGATCACTGGTACTCGATA 58.725 43.478 0.00 0.00 0.00 2.92
400 402 2.521126 TGTTGGATCACTGGTACTCGA 58.479 47.619 0.00 0.00 0.00 4.04
430 445 2.034124 ACAAACTTTGCACTGCCTCAT 58.966 42.857 1.14 0.00 0.00 2.90
431 446 1.473258 ACAAACTTTGCACTGCCTCA 58.527 45.000 1.14 0.00 0.00 3.86
432 447 2.584492 AACAAACTTTGCACTGCCTC 57.416 45.000 1.14 0.00 0.00 4.70
433 448 2.620242 CAAACAAACTTTGCACTGCCT 58.380 42.857 1.14 0.00 0.00 4.75
434 449 1.665169 CCAAACAAACTTTGCACTGCC 59.335 47.619 1.14 0.00 0.00 4.85
435 450 1.062440 GCCAAACAAACTTTGCACTGC 59.938 47.619 1.14 0.00 0.00 4.40
436 451 2.620242 AGCCAAACAAACTTTGCACTG 58.380 42.857 1.14 0.00 0.00 3.66
437 452 4.370917 CATAGCCAAACAAACTTTGCACT 58.629 39.130 1.14 0.00 0.00 4.40
438 453 3.494251 CCATAGCCAAACAAACTTTGCAC 59.506 43.478 1.14 0.00 0.00 4.57
957 974 4.612259 CGAAGTTTGGCAAAGATGACTCAG 60.612 45.833 13.94 1.64 34.75 3.35
958 975 3.250762 CGAAGTTTGGCAAAGATGACTCA 59.749 43.478 13.94 0.00 34.75 3.41
999 1016 3.071023 CCTCTAGGCAATCGGTTTCCATA 59.929 47.826 0.00 0.00 0.00 2.74
1311 1417 2.146724 TGTACCAGGTGCACTGCCT 61.147 57.895 17.98 2.00 46.14 4.75
1312 1418 1.966451 GTGTACCAGGTGCACTGCC 60.966 63.158 28.52 6.89 46.14 4.85
1313 1419 2.317609 CGTGTACCAGGTGCACTGC 61.318 63.158 31.13 11.98 44.65 4.40
1314 1420 2.317609 GCGTGTACCAGGTGCACTG 61.318 63.158 31.13 25.35 44.65 3.66
1315 1421 2.030562 GCGTGTACCAGGTGCACT 59.969 61.111 31.13 0.00 44.65 4.40
1316 1422 3.047877 GGCGTGTACCAGGTGCAC 61.048 66.667 26.66 26.66 43.69 4.57
1317 1423 4.323477 GGGCGTGTACCAGGTGCA 62.323 66.667 6.22 6.22 0.00 4.57
1318 1424 4.016706 AGGGCGTGTACCAGGTGC 62.017 66.667 0.76 0.09 0.00 5.01
1319 1425 2.047274 CAGGGCGTGTACCAGGTG 60.047 66.667 0.76 0.00 0.00 4.00
1320 1426 4.016706 GCAGGGCGTGTACCAGGT 62.017 66.667 9.16 0.00 0.00 4.00
1321 1427 3.329542 ATGCAGGGCGTGTACCAGG 62.330 63.158 9.16 0.00 0.00 4.45
1322 1428 2.108514 CATGCAGGGCGTGTACCAG 61.109 63.158 9.16 0.00 40.30 4.00
1323 1429 2.046411 CATGCAGGGCGTGTACCA 60.046 61.111 9.16 0.00 40.30 3.25
1324 1430 2.587322 TAGCATGCAGGGCGTGTACC 62.587 60.000 21.98 0.00 46.10 3.34
1325 1431 1.153449 TAGCATGCAGGGCGTGTAC 60.153 57.895 21.98 0.00 46.10 2.90
1326 1432 1.143838 CTAGCATGCAGGGCGTGTA 59.856 57.895 21.98 4.56 46.10 2.90
1327 1433 2.124983 CTAGCATGCAGGGCGTGT 60.125 61.111 21.98 0.00 46.10 4.49
1328 1434 2.649245 TAGCTAGCATGCAGGGCGTG 62.649 60.000 21.98 2.14 46.98 5.34
1329 1435 2.374830 CTAGCTAGCATGCAGGGCGT 62.375 60.000 21.98 12.06 36.08 5.68
1330 1436 1.667191 CTAGCTAGCATGCAGGGCG 60.667 63.158 21.98 3.95 36.08 6.13
1331 1437 0.681733 TACTAGCTAGCATGCAGGGC 59.318 55.000 21.98 19.37 34.99 5.19
1332 1438 1.274728 CCTACTAGCTAGCATGCAGGG 59.725 57.143 21.98 10.21 34.99 4.45
1333 1439 1.274728 CCCTACTAGCTAGCATGCAGG 59.725 57.143 21.98 16.72 34.99 4.85
1334 1440 2.230992 CTCCCTACTAGCTAGCATGCAG 59.769 54.545 21.98 15.76 34.99 4.41
1335 1441 2.242926 CTCCCTACTAGCTAGCATGCA 58.757 52.381 21.98 5.01 34.99 3.96
1336 1442 1.548269 CCTCCCTACTAGCTAGCATGC 59.452 57.143 20.91 10.51 0.00 4.06
1337 1443 1.548269 GCCTCCCTACTAGCTAGCATG 59.452 57.143 20.91 11.37 0.00 4.06
1338 1444 1.888826 CGCCTCCCTACTAGCTAGCAT 60.889 57.143 20.91 4.85 0.00 3.79
1339 1445 0.537600 CGCCTCCCTACTAGCTAGCA 60.538 60.000 20.91 7.12 0.00 3.49
1340 1446 1.245376 CCGCCTCCCTACTAGCTAGC 61.245 65.000 20.91 6.62 0.00 3.42
1341 1447 1.245376 GCCGCCTCCCTACTAGCTAG 61.245 65.000 19.44 19.44 0.00 3.42
1342 1448 1.228490 GCCGCCTCCCTACTAGCTA 60.228 63.158 0.00 0.00 0.00 3.32
1343 1449 2.522193 GCCGCCTCCCTACTAGCT 60.522 66.667 0.00 0.00 0.00 3.32
1344 1450 2.838225 TGCCGCCTCCCTACTAGC 60.838 66.667 0.00 0.00 0.00 3.42
1345 1451 1.327690 TTGTGCCGCCTCCCTACTAG 61.328 60.000 0.00 0.00 0.00 2.57
1346 1452 1.305465 TTGTGCCGCCTCCCTACTA 60.305 57.895 0.00 0.00 0.00 1.82
1347 1453 2.606519 TTGTGCCGCCTCCCTACT 60.607 61.111 0.00 0.00 0.00 2.57
1348 1454 2.436115 GTTGTGCCGCCTCCCTAC 60.436 66.667 0.00 0.00 0.00 3.18
1349 1455 2.925706 TGTTGTGCCGCCTCCCTA 60.926 61.111 0.00 0.00 0.00 3.53
1350 1456 4.335647 CTGTTGTGCCGCCTCCCT 62.336 66.667 0.00 0.00 0.00 4.20
1351 1457 3.628646 ATCTGTTGTGCCGCCTCCC 62.629 63.158 0.00 0.00 0.00 4.30
1352 1458 1.244019 AAATCTGTTGTGCCGCCTCC 61.244 55.000 0.00 0.00 0.00 4.30
1353 1459 0.169009 GAAATCTGTTGTGCCGCCTC 59.831 55.000 0.00 0.00 0.00 4.70
1354 1460 0.250901 AGAAATCTGTTGTGCCGCCT 60.251 50.000 0.00 0.00 0.00 5.52
1355 1461 1.448985 TAGAAATCTGTTGTGCCGCC 58.551 50.000 0.00 0.00 0.00 6.13
1356 1462 2.225491 TGTTAGAAATCTGTTGTGCCGC 59.775 45.455 0.00 0.00 0.00 6.53
1357 1463 4.213270 TCTTGTTAGAAATCTGTTGTGCCG 59.787 41.667 0.00 0.00 0.00 5.69
1358 1464 5.689383 TCTTGTTAGAAATCTGTTGTGCC 57.311 39.130 0.00 0.00 0.00 5.01
1359 1465 7.985634 TTTTCTTGTTAGAAATCTGTTGTGC 57.014 32.000 1.58 0.00 46.73 4.57
1369 1475 9.887406 GACGGTTTGATATTTTCTTGTTAGAAA 57.113 29.630 0.00 0.00 46.07 2.52
1370 1476 9.058174 TGACGGTTTGATATTTTCTTGTTAGAA 57.942 29.630 0.00 0.00 38.61 2.10
1371 1477 8.610248 TGACGGTTTGATATTTTCTTGTTAGA 57.390 30.769 0.00 0.00 0.00 2.10
1372 1478 9.113876 GTTGACGGTTTGATATTTTCTTGTTAG 57.886 33.333 0.00 0.00 0.00 2.34
1373 1479 8.842280 AGTTGACGGTTTGATATTTTCTTGTTA 58.158 29.630 0.00 0.00 0.00 2.41
1374 1480 7.712797 AGTTGACGGTTTGATATTTTCTTGTT 58.287 30.769 0.00 0.00 0.00 2.83
1375 1481 7.272037 AGTTGACGGTTTGATATTTTCTTGT 57.728 32.000 0.00 0.00 0.00 3.16
1376 1482 7.647715 ACAAGTTGACGGTTTGATATTTTCTTG 59.352 33.333 10.54 0.00 34.33 3.02
1377 1483 7.647715 CACAAGTTGACGGTTTGATATTTTCTT 59.352 33.333 10.54 0.00 0.00 2.52
1378 1484 7.138736 CACAAGTTGACGGTTTGATATTTTCT 58.861 34.615 10.54 0.00 0.00 2.52
1379 1485 6.362283 CCACAAGTTGACGGTTTGATATTTTC 59.638 38.462 10.54 0.00 0.00 2.29
1380 1486 6.183360 ACCACAAGTTGACGGTTTGATATTTT 60.183 34.615 10.54 0.00 0.00 1.82
1381 1487 5.300792 ACCACAAGTTGACGGTTTGATATTT 59.699 36.000 10.54 0.00 0.00 1.40
1382 1488 4.825085 ACCACAAGTTGACGGTTTGATATT 59.175 37.500 10.54 0.00 0.00 1.28
1383 1489 4.394729 ACCACAAGTTGACGGTTTGATAT 58.605 39.130 10.54 0.00 0.00 1.63
1384 1490 3.811083 ACCACAAGTTGACGGTTTGATA 58.189 40.909 10.54 0.00 0.00 2.15
1385 1491 2.650322 ACCACAAGTTGACGGTTTGAT 58.350 42.857 10.54 0.00 0.00 2.57
1386 1492 2.116827 ACCACAAGTTGACGGTTTGA 57.883 45.000 10.54 0.00 0.00 2.69
1387 1493 2.931512 AACCACAAGTTGACGGTTTG 57.068 45.000 21.31 5.55 37.29 2.93
1388 1494 3.945981 AAAACCACAAGTTGACGGTTT 57.054 38.095 27.15 27.15 43.28 3.27
1389 1495 5.589452 TGTATAAAACCACAAGTTGACGGTT 59.411 36.000 21.31 21.31 39.19 4.44
1390 1496 5.124645 TGTATAAAACCACAAGTTGACGGT 58.875 37.500 10.54 12.49 39.19 4.83
1391 1497 5.676532 TGTATAAAACCACAAGTTGACGG 57.323 39.130 10.54 11.83 39.19 4.79
1392 1498 5.567534 GCATGTATAAAACCACAAGTTGACG 59.432 40.000 10.54 1.04 39.19 4.35
1393 1499 5.861787 GGCATGTATAAAACCACAAGTTGAC 59.138 40.000 10.54 0.00 39.19 3.18
1394 1500 5.772672 AGGCATGTATAAAACCACAAGTTGA 59.227 36.000 10.54 0.00 39.19 3.18
1395 1501 5.863397 CAGGCATGTATAAAACCACAAGTTG 59.137 40.000 0.00 0.00 39.19 3.16
1396 1502 5.772672 TCAGGCATGTATAAAACCACAAGTT 59.227 36.000 0.00 0.00 41.81 2.66
1397 1503 5.321102 TCAGGCATGTATAAAACCACAAGT 58.679 37.500 0.00 0.00 0.00 3.16
1398 1504 5.895636 TCAGGCATGTATAAAACCACAAG 57.104 39.130 0.00 0.00 0.00 3.16
1399 1505 6.040955 TGTTTCAGGCATGTATAAAACCACAA 59.959 34.615 9.88 0.00 0.00 3.33
1400 1506 5.536538 TGTTTCAGGCATGTATAAAACCACA 59.463 36.000 9.88 0.00 0.00 4.17
1401 1507 6.019779 TGTTTCAGGCATGTATAAAACCAC 57.980 37.500 9.88 0.00 0.00 4.16
1402 1508 6.849085 ATGTTTCAGGCATGTATAAAACCA 57.151 33.333 9.88 1.47 0.00 3.67
1403 1509 8.129211 GTCTATGTTTCAGGCATGTATAAAACC 58.871 37.037 9.88 0.00 0.00 3.27
1404 1510 8.673711 TGTCTATGTTTCAGGCATGTATAAAAC 58.326 33.333 0.00 2.33 0.00 2.43
1405 1511 8.800370 TGTCTATGTTTCAGGCATGTATAAAA 57.200 30.769 0.00 0.00 0.00 1.52
1406 1512 8.800370 TTGTCTATGTTTCAGGCATGTATAAA 57.200 30.769 0.00 0.00 0.00 1.40
1407 1513 8.978874 ATTGTCTATGTTTCAGGCATGTATAA 57.021 30.769 0.00 0.00 0.00 0.98
1408 1514 8.978874 AATTGTCTATGTTTCAGGCATGTATA 57.021 30.769 0.00 0.00 0.00 1.47
1409 1515 7.886629 AATTGTCTATGTTTCAGGCATGTAT 57.113 32.000 0.00 0.00 0.00 2.29
1410 1516 7.701539 AAATTGTCTATGTTTCAGGCATGTA 57.298 32.000 0.00 0.00 0.00 2.29
1411 1517 6.594788 AAATTGTCTATGTTTCAGGCATGT 57.405 33.333 0.00 0.00 0.00 3.21
1412 1518 6.869913 ACAAAATTGTCTATGTTTCAGGCATG 59.130 34.615 0.00 0.00 36.50 4.06
1413 1519 6.996509 ACAAAATTGTCTATGTTTCAGGCAT 58.003 32.000 0.00 0.00 36.50 4.40
1414 1520 6.403866 ACAAAATTGTCTATGTTTCAGGCA 57.596 33.333 0.00 0.00 36.50 4.75
1415 1521 6.701400 ACAACAAAATTGTCTATGTTTCAGGC 59.299 34.615 0.00 0.00 41.31 4.85
1416 1522 8.542132 CAACAACAAAATTGTCTATGTTTCAGG 58.458 33.333 10.54 0.30 41.31 3.86
1417 1523 9.299963 TCAACAACAAAATTGTCTATGTTTCAG 57.700 29.630 10.54 3.47 41.31 3.02
1418 1524 9.814899 ATCAACAACAAAATTGTCTATGTTTCA 57.185 25.926 10.54 3.94 41.31 2.69
1426 1532 8.779303 TCACGTATATCAACAACAAAATTGTCT 58.221 29.630 0.00 0.00 41.31 3.41
1427 1533 8.942669 TCACGTATATCAACAACAAAATTGTC 57.057 30.769 0.00 0.00 41.31 3.18
1428 1534 7.537306 GCTCACGTATATCAACAACAAAATTGT 59.463 33.333 0.00 0.00 44.72 2.71
1429 1535 7.536964 TGCTCACGTATATCAACAACAAAATTG 59.463 33.333 0.00 0.00 0.00 2.32
1430 1536 7.537306 GTGCTCACGTATATCAACAACAAAATT 59.463 33.333 0.00 0.00 0.00 1.82
1431 1537 7.021196 GTGCTCACGTATATCAACAACAAAAT 58.979 34.615 0.00 0.00 0.00 1.82
1432 1538 6.203915 AGTGCTCACGTATATCAACAACAAAA 59.796 34.615 0.00 0.00 36.20 2.44
1433 1539 5.699001 AGTGCTCACGTATATCAACAACAAA 59.301 36.000 0.00 0.00 36.20 2.83
1434 1540 5.234752 AGTGCTCACGTATATCAACAACAA 58.765 37.500 0.00 0.00 36.20 2.83
1435 1541 4.816392 AGTGCTCACGTATATCAACAACA 58.184 39.130 0.00 0.00 36.20 3.33
1436 1542 4.862574 TGAGTGCTCACGTATATCAACAAC 59.137 41.667 0.00 0.00 34.14 3.32
1437 1543 5.066968 TGAGTGCTCACGTATATCAACAA 57.933 39.130 0.00 0.00 34.14 2.83
1438 1544 4.712122 TGAGTGCTCACGTATATCAACA 57.288 40.909 0.00 0.00 34.14 3.33
1450 1556 3.678056 ATAACTTTCGGTGAGTGCTCA 57.322 42.857 0.00 0.00 37.24 4.26
1451 1557 3.546670 CGTATAACTTTCGGTGAGTGCTC 59.453 47.826 0.00 0.00 0.00 4.26
1452 1558 3.192001 TCGTATAACTTTCGGTGAGTGCT 59.808 43.478 0.00 0.00 0.00 4.40
1453 1559 3.302699 GTCGTATAACTTTCGGTGAGTGC 59.697 47.826 0.00 0.00 0.00 4.40
1454 1560 4.478699 TGTCGTATAACTTTCGGTGAGTG 58.521 43.478 0.00 0.00 0.00 3.51
1455 1561 4.771590 TGTCGTATAACTTTCGGTGAGT 57.228 40.909 0.00 0.00 0.00 3.41
1456 1562 6.493116 AGTATGTCGTATAACTTTCGGTGAG 58.507 40.000 0.00 0.00 0.00 3.51
1457 1563 6.441093 AGTATGTCGTATAACTTTCGGTGA 57.559 37.500 0.00 0.00 0.00 4.02
1458 1564 6.355405 CGTAGTATGTCGTATAACTTTCGGTG 59.645 42.308 0.00 0.00 0.00 4.94
1459 1565 6.422223 CGTAGTATGTCGTATAACTTTCGGT 58.578 40.000 0.00 0.00 0.00 4.69
1460 1566 5.338035 GCGTAGTATGTCGTATAACTTTCGG 59.662 44.000 0.00 0.00 0.00 4.30
1461 1567 5.338035 GGCGTAGTATGTCGTATAACTTTCG 59.662 44.000 0.00 0.00 0.00 3.46
1462 1568 5.338035 CGGCGTAGTATGTCGTATAACTTTC 59.662 44.000 8.22 0.00 0.00 2.62
1463 1569 5.207768 CGGCGTAGTATGTCGTATAACTTT 58.792 41.667 8.22 0.00 0.00 2.66
1464 1570 4.776743 CGGCGTAGTATGTCGTATAACTT 58.223 43.478 8.22 0.00 0.00 2.66
1465 1571 3.364366 GCGGCGTAGTATGTCGTATAACT 60.364 47.826 17.09 0.00 0.00 2.24
1466 1572 2.904932 GCGGCGTAGTATGTCGTATAAC 59.095 50.000 17.09 0.00 0.00 1.89
1467 1573 2.547634 TGCGGCGTAGTATGTCGTATAA 59.452 45.455 17.09 0.00 0.00 0.98
1468 1574 2.142319 TGCGGCGTAGTATGTCGTATA 58.858 47.619 17.09 2.67 0.00 1.47
1469 1575 0.946528 TGCGGCGTAGTATGTCGTAT 59.053 50.000 17.09 0.00 0.00 3.06
1470 1576 0.731994 TTGCGGCGTAGTATGTCGTA 59.268 50.000 17.09 10.54 0.00 3.43
1471 1577 0.109179 TTTGCGGCGTAGTATGTCGT 60.109 50.000 17.09 0.00 0.00 4.34
1472 1578 0.993532 TTTTGCGGCGTAGTATGTCG 59.006 50.000 12.01 12.01 0.00 4.35
1473 1579 2.605818 TGATTTTGCGGCGTAGTATGTC 59.394 45.455 9.37 0.10 0.00 3.06
1474 1580 2.607635 CTGATTTTGCGGCGTAGTATGT 59.392 45.455 9.37 0.00 0.00 2.29
1475 1581 2.032894 CCTGATTTTGCGGCGTAGTATG 60.033 50.000 9.37 0.00 0.00 2.39
1476 1582 2.210116 CCTGATTTTGCGGCGTAGTAT 58.790 47.619 9.37 0.72 0.00 2.12
1477 1583 1.066716 ACCTGATTTTGCGGCGTAGTA 60.067 47.619 9.37 0.00 0.00 1.82
1478 1584 0.321298 ACCTGATTTTGCGGCGTAGT 60.321 50.000 9.37 0.00 0.00 2.73
1479 1585 0.373716 GACCTGATTTTGCGGCGTAG 59.626 55.000 9.37 0.00 0.00 3.51
1480 1586 1.022451 GGACCTGATTTTGCGGCGTA 61.022 55.000 9.37 0.00 0.00 4.42
1481 1587 2.332654 GGACCTGATTTTGCGGCGT 61.333 57.895 9.37 0.00 0.00 5.68
1482 1588 0.742990 TAGGACCTGATTTTGCGGCG 60.743 55.000 3.53 0.51 0.00 6.46
1483 1589 0.733150 GTAGGACCTGATTTTGCGGC 59.267 55.000 3.53 0.00 0.00 6.53
1484 1590 1.006832 CGTAGGACCTGATTTTGCGG 58.993 55.000 3.53 0.00 0.00 5.69
1503 1609 4.147322 CATCGCGTCGGTGTTGCC 62.147 66.667 5.77 0.00 32.87 4.52
1504 1610 2.548587 CTTCATCGCGTCGGTGTTGC 62.549 60.000 5.77 0.00 39.21 4.17
1505 1611 1.006825 TCTTCATCGCGTCGGTGTTG 61.007 55.000 5.77 6.73 39.21 3.33
1506 1612 0.108804 ATCTTCATCGCGTCGGTGTT 60.109 50.000 5.77 0.00 39.21 3.32
1507 1613 0.108804 AATCTTCATCGCGTCGGTGT 60.109 50.000 5.77 0.00 39.21 4.16
1508 1614 0.298707 CAATCTTCATCGCGTCGGTG 59.701 55.000 5.77 6.22 39.56 4.94
1509 1615 1.421410 GCAATCTTCATCGCGTCGGT 61.421 55.000 5.77 0.00 0.00 4.69
1510 1616 1.273887 GCAATCTTCATCGCGTCGG 59.726 57.895 5.77 0.00 0.00 4.79
1511 1617 0.043566 CTGCAATCTTCATCGCGTCG 60.044 55.000 5.77 0.00 0.00 5.12
1512 1618 0.315706 GCTGCAATCTTCATCGCGTC 60.316 55.000 5.77 0.00 0.00 5.19
1513 1619 0.742281 AGCTGCAATCTTCATCGCGT 60.742 50.000 5.77 0.00 0.00 6.01
1514 1620 0.315951 CAGCTGCAATCTTCATCGCG 60.316 55.000 0.00 0.00 0.00 5.87
1515 1621 0.029035 CCAGCTGCAATCTTCATCGC 59.971 55.000 8.66 0.00 0.00 4.58
1516 1622 0.029035 GCCAGCTGCAATCTTCATCG 59.971 55.000 8.66 0.00 40.77 3.84
1517 1623 3.940723 GCCAGCTGCAATCTTCATC 57.059 52.632 8.66 0.00 40.77 2.92
1527 1633 3.683822 GTCTTATATCTCATGCCAGCTGC 59.316 47.826 8.66 4.57 41.77 5.25
1528 1634 5.149973 AGTCTTATATCTCATGCCAGCTG 57.850 43.478 6.78 6.78 0.00 4.24
1529 1635 7.287466 CCTATAGTCTTATATCTCATGCCAGCT 59.713 40.741 0.00 0.00 0.00 4.24
1530 1636 7.286546 TCCTATAGTCTTATATCTCATGCCAGC 59.713 40.741 0.00 0.00 0.00 4.85
1531 1637 8.759481 TCCTATAGTCTTATATCTCATGCCAG 57.241 38.462 0.00 0.00 0.00 4.85
1532 1638 9.140874 CATCCTATAGTCTTATATCTCATGCCA 57.859 37.037 0.00 0.00 0.00 4.92
1533 1639 8.584157 CCATCCTATAGTCTTATATCTCATGCC 58.416 40.741 0.00 0.00 0.00 4.40
1534 1640 8.584157 CCCATCCTATAGTCTTATATCTCATGC 58.416 40.741 0.00 0.00 0.00 4.06
1535 1641 8.584157 GCCCATCCTATAGTCTTATATCTCATG 58.416 40.741 0.00 0.00 0.00 3.07
1536 1642 7.732593 GGCCCATCCTATAGTCTTATATCTCAT 59.267 40.741 0.00 0.00 0.00 2.90
1537 1643 7.069986 GGCCCATCCTATAGTCTTATATCTCA 58.930 42.308 0.00 0.00 0.00 3.27
1538 1644 6.207810 CGGCCCATCCTATAGTCTTATATCTC 59.792 46.154 0.00 0.00 0.00 2.75
1539 1645 6.071984 CGGCCCATCCTATAGTCTTATATCT 58.928 44.000 0.00 0.00 0.00 1.98
1540 1646 6.016108 GTCGGCCCATCCTATAGTCTTATATC 60.016 46.154 0.00 0.00 0.00 1.63
1541 1647 5.834204 GTCGGCCCATCCTATAGTCTTATAT 59.166 44.000 0.00 0.00 0.00 0.86
1542 1648 5.198965 GTCGGCCCATCCTATAGTCTTATA 58.801 45.833 0.00 0.00 0.00 0.98
1543 1649 4.024670 GTCGGCCCATCCTATAGTCTTAT 58.975 47.826 0.00 0.00 0.00 1.73
1544 1650 3.428532 GTCGGCCCATCCTATAGTCTTA 58.571 50.000 0.00 0.00 0.00 2.10
1545 1651 2.249139 GTCGGCCCATCCTATAGTCTT 58.751 52.381 0.00 0.00 0.00 3.01
1546 1652 1.550409 GGTCGGCCCATCCTATAGTCT 60.550 57.143 0.00 0.00 0.00 3.24
1547 1653 0.896226 GGTCGGCCCATCCTATAGTC 59.104 60.000 0.00 0.00 0.00 2.59
1548 1654 3.068562 GGTCGGCCCATCCTATAGT 57.931 57.895 0.00 0.00 0.00 2.12
1586 1692 3.494254 AACAGGGCCAACACCGGA 61.494 61.111 9.46 0.00 0.00 5.14
1593 1699 0.105246 ATTTGGGTCAACAGGGCCAA 60.105 50.000 6.18 0.00 0.00 4.52
1594 1700 0.541764 GATTTGGGTCAACAGGGCCA 60.542 55.000 6.18 0.00 0.00 5.36
1601 1707 3.314080 TGTCAAACGAGATTTGGGTCAAC 59.686 43.478 0.00 0.00 46.65 3.18
1622 1728 0.830648 ATGGGTCATGTAGGTCGGTG 59.169 55.000 0.00 0.00 0.00 4.94
1632 1738 0.974010 AAGCCTGCCAATGGGTCATG 60.974 55.000 0.00 0.00 33.76 3.07
1633 1739 0.974010 CAAGCCTGCCAATGGGTCAT 60.974 55.000 0.00 0.00 33.76 3.06
1646 1752 0.971447 GGGTAGTCCGTCTCAAGCCT 60.971 60.000 0.00 0.00 33.83 4.58
1647 1753 0.971447 AGGGTAGTCCGTCTCAAGCC 60.971 60.000 0.00 0.00 41.52 4.35
1648 1754 0.173708 CAGGGTAGTCCGTCTCAAGC 59.826 60.000 0.00 0.00 41.52 4.01
1649 1755 0.818296 CCAGGGTAGTCCGTCTCAAG 59.182 60.000 0.00 0.00 41.52 3.02
1650 1756 0.406750 TCCAGGGTAGTCCGTCTCAA 59.593 55.000 0.00 0.00 41.52 3.02
1651 1757 0.323178 GTCCAGGGTAGTCCGTCTCA 60.323 60.000 0.00 0.00 41.52 3.27
1652 1758 1.036481 GGTCCAGGGTAGTCCGTCTC 61.036 65.000 0.00 0.00 41.52 3.36
1653 1759 1.000107 GGTCCAGGGTAGTCCGTCT 60.000 63.158 0.00 0.00 41.52 4.18
1654 1760 0.257039 TAGGTCCAGGGTAGTCCGTC 59.743 60.000 0.00 0.00 41.52 4.79
1655 1761 0.258194 CTAGGTCCAGGGTAGTCCGT 59.742 60.000 0.00 0.00 41.52 4.69
1656 1762 0.467659 CCTAGGTCCAGGGTAGTCCG 60.468 65.000 0.00 0.00 41.52 4.79
1657 1763 3.535574 CCTAGGTCCAGGGTAGTCC 57.464 63.158 0.00 0.00 31.47 3.85
1712 1818 4.571369 TGGTCGGTTATGGTGGATAAAA 57.429 40.909 0.00 0.00 0.00 1.52
1810 1916 1.724545 ACCCTAGCTACCAACACACA 58.275 50.000 0.00 0.00 0.00 3.72
1820 1926 1.600107 CCGCCACAAACCCTAGCTA 59.400 57.895 0.00 0.00 0.00 3.32
1861 1967 2.582498 GCTGTCCGATCCGTTCCG 60.582 66.667 0.00 0.00 0.00 4.30
1874 1980 2.344203 CCGGACGAGGAAGAGCTGT 61.344 63.158 0.00 0.00 0.00 4.40
1910 2016 1.203287 TCGCAGTCTCCAGATCAACAG 59.797 52.381 0.00 0.00 0.00 3.16



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.