Multiple sequence alignment - TraesCS6B01G325900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G325900 chr6B 100.000 5341 0 0 1 5341 575325699 575331039 0.000000e+00 9864.0
1 TraesCS6B01G325900 chr6B 90.361 83 4 4 2069 2150 719773001 719772922 7.320000e-19 106.0
2 TraesCS6B01G325900 chr6B 88.312 77 8 1 3047 3123 284652757 284652682 2.050000e-14 91.6
3 TraesCS6B01G325900 chr6A 96.618 2277 52 9 2148 4402 529565828 529568101 0.000000e+00 3755.0
4 TraesCS6B01G325900 chr6A 95.442 1075 43 2 997 2068 529564759 529565830 0.000000e+00 1709.0
5 TraesCS6B01G325900 chr6A 86.740 543 66 5 9 547 529384738 529385278 2.750000e-167 599.0
6 TraesCS6B01G325900 chr6A 87.375 499 34 16 4843 5341 529600679 529601148 3.640000e-151 545.0
7 TraesCS6B01G325900 chr6A 88.997 309 32 1 9 315 529493098 529493406 1.090000e-101 381.0
8 TraesCS6B01G325900 chr6A 85.169 236 33 2 548 783 529385483 529385716 1.920000e-59 241.0
9 TraesCS6B01G325900 chr6A 84.483 116 5 7 4766 4871 529600554 529600666 9.460000e-18 102.0
10 TraesCS6B01G325900 chr6A 100.000 34 0 0 922 955 529564722 529564755 4.470000e-06 63.9
11 TraesCS6B01G325900 chr6A 80.723 83 9 5 2111 2187 47465544 47465463 2.080000e-04 58.4
12 TraesCS6B01G325900 chr6A 96.970 33 1 0 902 934 529564674 529564706 7.470000e-04 56.5
13 TraesCS6B01G325900 chr6D 94.516 1167 45 9 902 2068 385228407 385229554 0.000000e+00 1783.0
14 TraesCS6B01G325900 chr6D 92.907 1142 67 11 3511 4644 385231902 385233037 0.000000e+00 1648.0
15 TraesCS6B01G325900 chr6D 96.167 861 18 2 2154 3013 385229557 385230403 0.000000e+00 1393.0
16 TraesCS6B01G325900 chr6D 92.063 567 13 8 3010 3544 385231336 385231902 0.000000e+00 769.0
17 TraesCS6B01G325900 chr6D 90.311 547 46 4 9 549 385226291 385226836 0.000000e+00 710.0
18 TraesCS6B01G325900 chr6D 86.193 507 34 19 4843 5341 385233186 385233664 2.850000e-142 516.0
19 TraesCS6B01G325900 chr6D 87.764 237 29 0 547 783 385227038 385227274 1.470000e-70 278.0
20 TraesCS6B01G325900 chr3D 97.030 101 2 1 4668 4768 497083739 497083838 9.200000e-38 169.0
21 TraesCS6B01G325900 chr3D 97.500 80 2 0 4682 4761 307568755 307568834 2.590000e-28 137.0
22 TraesCS6B01G325900 chr3D 89.333 75 8 0 3049 3123 13182036 13182110 1.580000e-15 95.3
23 TraesCS6B01G325900 chr7D 96.078 102 4 0 4666 4767 461166106 461166005 3.310000e-37 167.0
24 TraesCS6B01G325900 chr7D 89.888 89 6 3 2062 2147 412154808 412154720 1.570000e-20 111.0
25 TraesCS6B01G325900 chr7D 90.278 72 7 0 3052 3123 262364694 262364765 1.580000e-15 95.3
26 TraesCS6B01G325900 chr7D 88.889 72 8 0 3052 3123 431879551 431879480 7.370000e-14 89.8
27 TraesCS6B01G325900 chr1A 97.000 100 2 1 4668 4767 147491927 147491829 3.310000e-37 167.0
28 TraesCS6B01G325900 chr1A 97.917 96 1 1 4668 4763 528252960 528253054 1.190000e-36 165.0
29 TraesCS6B01G325900 chr2D 96.939 98 2 1 4668 4765 579421566 579421470 4.280000e-36 163.0
30 TraesCS6B01G325900 chr7B 95.098 102 5 0 4666 4767 31838563 31838462 1.540000e-35 161.0
31 TraesCS6B01G325900 chr7B 96.875 96 2 1 4672 4767 594985043 594984949 5.540000e-35 159.0
32 TraesCS6B01G325900 chr7B 92.308 91 7 0 4672 4762 730155114 730155204 4.340000e-26 130.0
33 TraesCS6B01G325900 chr4D 96.000 100 3 1 4668 4767 29093460 29093362 1.540000e-35 161.0
34 TraesCS6B01G325900 chr4D 95.098 102 5 0 4666 4767 108591356 108591457 1.540000e-35 161.0
35 TraesCS6B01G325900 chr4D 96.000 100 3 1 4668 4767 333227506 333227604 1.540000e-35 161.0
36 TraesCS6B01G325900 chr4D 96.053 76 3 0 4685 4760 375564881 375564806 2.020000e-24 124.0
37 TraesCS6B01G325900 chr4D 89.247 93 3 2 2065 2150 191277153 191277061 5.660000e-20 110.0
38 TraesCS6B01G325900 chr5D 91.860 86 5 2 2064 2147 319372088 319372173 9.400000e-23 119.0
39 TraesCS6B01G325900 chr5D 92.308 39 3 0 3381 3419 90314449 90314487 7.470000e-04 56.5
40 TraesCS6B01G325900 chr5A 92.857 84 0 3 2065 2147 442300945 442300867 3.380000e-22 117.0
41 TraesCS6B01G325900 chr4B 92.857 84 0 2 2065 2147 535740629 535740551 3.380000e-22 117.0
42 TraesCS6B01G325900 chr4B 90.000 70 7 0 3054 3123 601527657 601527588 2.050000e-14 91.6
43 TraesCS6B01G325900 chr4B 98.000 50 1 0 4682 4731 657303792 657303841 2.650000e-13 87.9
44 TraesCS6B01G325900 chr1B 93.506 77 5 0 4685 4761 599243582 599243658 1.220000e-21 115.0
45 TraesCS6B01G325900 chr1B 90.588 85 6 2 2066 2148 17608993 17609077 1.570000e-20 111.0
46 TraesCS6B01G325900 chr1B 88.889 72 8 0 3052 3123 302512176 302512105 7.370000e-14 89.8
47 TraesCS6B01G325900 chr1D 92.405 79 6 0 4682 4760 471607824 471607746 4.370000e-21 113.0
48 TraesCS6B01G325900 chr1D 88.889 72 8 0 3052 3123 212719246 212719317 7.370000e-14 89.8
49 TraesCS6B01G325900 chr4A 90.000 90 4 2 2063 2147 67268450 67268361 1.570000e-20 111.0
50 TraesCS6B01G325900 chr4A 91.566 83 4 2 2069 2150 594011403 594011323 1.570000e-20 111.0
51 TraesCS6B01G325900 chr2B 88.158 76 9 0 4685 4760 785067453 785067528 2.050000e-14 91.6
52 TraesCS6B01G325900 chr3B 85.556 90 3 1 4682 4761 690462369 690462280 9.530000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G325900 chr6B 575325699 575331039 5340 False 9864.000000 9864 100.000000 1 5341 1 chr6B.!!$F1 5340
1 TraesCS6B01G325900 chr6A 529564674 529568101 3427 False 1396.100000 3755 97.257500 902 4402 4 chr6A.!!$F3 3500
2 TraesCS6B01G325900 chr6A 529384738 529385716 978 False 420.000000 599 85.954500 9 783 2 chr6A.!!$F2 774
3 TraesCS6B01G325900 chr6A 529600554 529601148 594 False 323.500000 545 85.929000 4766 5341 2 chr6A.!!$F4 575
4 TraesCS6B01G325900 chr6D 385226291 385233664 7373 False 1013.857143 1783 91.417286 9 5341 7 chr6D.!!$F1 5332

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
431 438 0.255890 CCATTCGGAAGATGGTGGGT 59.744 55.000 2.78 0.00 41.6 4.51 F
679 891 0.380378 GGCGAAAAAGTGTGCAGACA 59.620 50.000 17.22 0.00 0.0 3.41 F
840 1052 0.539438 TGACATGTGGGCCAGGTTTC 60.539 55.000 6.40 1.88 38.4 2.78 F
868 1080 0.861837 CCAAGTGTGAGTCAGCGAAC 59.138 55.000 0.00 0.00 0.0 3.95 F
900 1112 1.067582 CGTACGGCAGGGGATCTTC 59.932 63.158 7.57 0.00 0.0 2.87 F
2087 3344 1.368374 TCCCTCCGTCCCAAAATTCT 58.632 50.000 0.00 0.00 0.0 2.40 F
4046 6305 0.473755 TTCTTCTTGCAGCTGACCCA 59.526 50.000 20.43 2.58 0.0 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2410 3668 1.044611 GGTGGAGGAGAGGAGCATAC 58.955 60.000 0.00 0.00 0.00 2.39 R
2747 4005 0.915364 GGGCTCTCCACATCTCCTTT 59.085 55.000 0.00 0.00 35.00 3.11 R
2797 4055 4.201335 CGACGACAATTACACGTGTAAGAC 60.201 45.833 36.07 25.01 42.94 3.01 R
2931 4189 5.627499 ATGCACTGTCGATGTGTTTTTAT 57.373 34.783 18.29 7.15 37.70 1.40 R
2957 4215 7.379529 CGCAAACAAAATTTGAGTTCTATGAGT 59.620 33.333 13.19 0.00 0.00 3.41 R
4050 6309 0.108138 AGATCGTGCTTACCCACAGC 60.108 55.000 0.00 0.00 35.47 4.40 R
5091 7484 0.525668 CGTTCGTTCCCATCTCTCCG 60.526 60.000 0.00 0.00 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 2.634639 TCCTAACCCTCCAACTGCTA 57.365 50.000 0.00 0.00 0.00 3.49
48 49 1.729586 AACCCTCCAACTGCTACTCA 58.270 50.000 0.00 0.00 0.00 3.41
56 57 2.012673 CAACTGCTACTCATCAAGGGC 58.987 52.381 0.00 0.00 0.00 5.19
73 76 1.966451 GCAGCGGTGTTTAGTGCCT 60.966 57.895 17.07 0.00 0.00 4.75
80 83 0.320421 GTGTTTAGTGCCTCGCTCCA 60.320 55.000 0.00 0.00 0.00 3.86
187 190 0.530744 GATGCGGTCACACAGTCCTA 59.469 55.000 0.00 0.00 0.00 2.94
263 267 1.685765 ATGGGTCTACCGCTGCTCA 60.686 57.895 0.00 0.00 44.64 4.26
290 297 2.063979 AATGGAGATGGACGCCCGA 61.064 57.895 0.00 0.00 37.67 5.14
329 336 1.823899 GATGGCGCTTTGGGTAGGG 60.824 63.158 7.64 0.00 0.00 3.53
330 337 2.552231 GATGGCGCTTTGGGTAGGGT 62.552 60.000 7.64 0.00 0.00 4.34
332 339 2.340328 GGCGCTTTGGGTAGGGTTG 61.340 63.158 7.64 0.00 0.00 3.77
342 349 2.158127 TGGGTAGGGTTGGAGTAGTCAA 60.158 50.000 0.00 0.00 0.00 3.18
344 351 2.901839 GGTAGGGTTGGAGTAGTCAACA 59.098 50.000 8.82 0.00 44.38 3.33
377 384 0.392998 AGGCAACAATAGAGGTGGCG 60.393 55.000 0.00 0.00 36.01 5.69
414 421 3.075005 GGTAGCAGGACCGCTCCA 61.075 66.667 13.05 0.00 42.62 3.86
431 438 0.255890 CCATTCGGAAGATGGTGGGT 59.744 55.000 2.78 0.00 41.60 4.51
446 453 1.275291 GTGGGTTTCATCGACTCCTCA 59.725 52.381 0.00 0.00 0.00 3.86
448 455 2.571653 TGGGTTTCATCGACTCCTCATT 59.428 45.455 0.00 0.00 0.00 2.57
555 562 2.492773 GCAAATGGCCGGGATGGAG 61.493 63.158 2.18 0.00 42.00 3.86
643 855 2.444351 GCATGAATGCGACAGTTAAGC 58.556 47.619 0.00 0.00 44.67 3.09
644 856 2.159531 GCATGAATGCGACAGTTAAGCA 60.160 45.455 0.00 2.44 44.67 3.91
679 891 0.380378 GGCGAAAAAGTGTGCAGACA 59.620 50.000 17.22 0.00 0.00 3.41
682 894 2.223249 GCGAAAAAGTGTGCAGACAAGA 60.223 45.455 17.22 0.00 32.49 3.02
722 934 0.729140 GGTTTGTCGAATGCTTGCGG 60.729 55.000 0.00 0.00 0.00 5.69
738 950 3.174788 GGGACGGTTGTGCGAATC 58.825 61.111 0.00 0.00 37.30 2.52
740 952 1.669760 GGACGGTTGTGCGAATCCA 60.670 57.895 0.00 0.00 0.00 3.41
756 968 1.214305 TCCATGCAAAGCCCTACCCT 61.214 55.000 0.00 0.00 0.00 4.34
757 969 0.550914 CCATGCAAAGCCCTACCCTA 59.449 55.000 0.00 0.00 0.00 3.53
768 980 2.357777 GCCCTACCCTAATTTGCTTCCA 60.358 50.000 0.00 0.00 0.00 3.53
769 981 3.880117 GCCCTACCCTAATTTGCTTCCAA 60.880 47.826 0.00 0.00 0.00 3.53
774 986 7.201911 CCCTACCCTAATTTGCTTCCAATTTAG 60.202 40.741 9.45 9.45 40.82 1.85
787 999 9.859427 TGCTTCCAATTTAGTAGAAAAATGATG 57.141 29.630 0.00 0.00 0.00 3.07
788 1000 9.305925 GCTTCCAATTTAGTAGAAAAATGATGG 57.694 33.333 0.00 0.00 30.46 3.51
791 1003 8.966868 TCCAATTTAGTAGAAAAATGATGGTCC 58.033 33.333 0.00 0.00 30.94 4.46
794 1006 7.605410 TTTAGTAGAAAAATGATGGTCCGTC 57.395 36.000 3.90 3.90 0.00 4.79
795 1007 4.181578 AGTAGAAAAATGATGGTCCGTCG 58.818 43.478 6.60 0.00 0.00 5.12
796 1008 2.356135 AGAAAAATGATGGTCCGTCGG 58.644 47.619 4.39 4.39 0.00 4.79
797 1009 2.027561 AGAAAAATGATGGTCCGTCGGA 60.028 45.455 10.71 10.71 0.00 4.55
800 1012 1.414158 AATGATGGTCCGTCGGAGAT 58.586 50.000 15.95 9.91 40.67 2.75
808 1020 2.202797 CGTCGGAGATGGCCAGTG 60.203 66.667 13.05 0.00 40.43 3.66
809 1021 2.512515 GTCGGAGATGGCCAGTGC 60.513 66.667 13.05 5.33 40.67 4.40
822 1034 4.988598 AGTGCCGTTGGTCCGCTG 62.989 66.667 0.00 0.00 0.00 5.18
823 1035 4.980805 GTGCCGTTGGTCCGCTGA 62.981 66.667 0.00 0.00 0.00 4.26
824 1036 4.980805 TGCCGTTGGTCCGCTGAC 62.981 66.667 0.00 0.00 40.98 3.51
825 1037 4.980805 GCCGTTGGTCCGCTGACA 62.981 66.667 10.60 0.00 43.65 3.58
826 1038 2.047274 CCGTTGGTCCGCTGACAT 60.047 61.111 10.60 0.00 43.65 3.06
827 1039 2.390599 CCGTTGGTCCGCTGACATG 61.391 63.158 10.60 0.00 43.65 3.21
829 1041 1.868997 GTTGGTCCGCTGACATGTG 59.131 57.895 1.15 0.00 43.65 3.21
830 1042 1.302431 TTGGTCCGCTGACATGTGG 60.302 57.895 1.15 0.00 43.65 4.17
831 1043 2.436646 GGTCCGCTGACATGTGGG 60.437 66.667 1.15 0.00 43.65 4.61
832 1044 3.127533 GTCCGCTGACATGTGGGC 61.128 66.667 1.15 6.31 41.37 5.36
833 1045 4.408821 TCCGCTGACATGTGGGCC 62.409 66.667 1.15 0.00 38.11 5.80
834 1046 4.720902 CCGCTGACATGTGGGCCA 62.721 66.667 1.15 0.00 34.20 5.36
835 1047 3.129502 CGCTGACATGTGGGCCAG 61.130 66.667 6.40 5.40 0.00 4.85
836 1048 2.753043 GCTGACATGTGGGCCAGG 60.753 66.667 6.40 1.59 0.00 4.45
837 1049 2.759114 CTGACATGTGGGCCAGGT 59.241 61.111 6.40 5.66 41.63 4.00
838 1050 1.075482 CTGACATGTGGGCCAGGTT 59.925 57.895 6.40 0.00 38.40 3.50
840 1052 0.539438 TGACATGTGGGCCAGGTTTC 60.539 55.000 6.40 1.88 38.40 2.78
842 1054 2.035626 ATGTGGGCCAGGTTTCCG 59.964 61.111 6.40 0.00 0.00 4.30
843 1055 3.583882 ATGTGGGCCAGGTTTCCGG 62.584 63.158 6.40 0.00 0.00 5.14
860 1072 4.643387 GCGGGCCCAAGTGTGAGT 62.643 66.667 24.92 0.00 0.00 3.41
861 1073 2.358737 CGGGCCCAAGTGTGAGTC 60.359 66.667 24.92 0.00 0.00 3.36
862 1074 2.836154 GGGCCCAAGTGTGAGTCA 59.164 61.111 19.95 0.00 0.00 3.41
863 1075 1.302832 GGGCCCAAGTGTGAGTCAG 60.303 63.158 19.95 0.00 0.00 3.51
865 1077 2.320587 GCCCAAGTGTGAGTCAGCG 61.321 63.158 0.00 0.00 0.00 5.18
868 1080 0.861837 CCAAGTGTGAGTCAGCGAAC 59.138 55.000 0.00 0.00 0.00 3.95
869 1081 1.570813 CAAGTGTGAGTCAGCGAACA 58.429 50.000 0.00 0.00 0.00 3.18
870 1082 1.524355 CAAGTGTGAGTCAGCGAACAG 59.476 52.381 0.00 0.00 0.00 3.16
885 1097 4.393155 CAGCAGCAGGGTGCCGTA 62.393 66.667 18.77 0.00 46.52 4.02
886 1098 4.394712 AGCAGCAGGGTGCCGTAC 62.395 66.667 18.77 0.00 46.52 3.67
900 1112 1.067582 CGTACGGCAGGGGATCTTC 59.932 63.158 7.57 0.00 0.00 2.87
1417 2671 6.608808 CCCATCTGATTATCTTCCTTTGGTTT 59.391 38.462 0.00 0.00 0.00 3.27
1433 2687 7.393234 TCCTTTGGTTTGTTATATGTTCTGGAG 59.607 37.037 0.00 0.00 0.00 3.86
1445 2699 7.914427 ATATGTTCTGGAGTAATGTGGTAGA 57.086 36.000 0.00 0.00 0.00 2.59
1455 2709 7.068962 TGGAGTAATGTGGTAGATTAATCGTGA 59.931 37.037 9.78 0.00 33.28 4.35
1460 2714 7.715265 ATGTGGTAGATTAATCGTGATTGTC 57.285 36.000 9.78 4.08 32.50 3.18
1463 2717 8.417884 TGTGGTAGATTAATCGTGATTGTCATA 58.582 33.333 9.78 0.00 32.50 2.15
1505 2759 6.682423 AGATGCATTTCGACAATACATTCA 57.318 33.333 0.00 0.00 0.00 2.57
1612 2866 8.870075 ACTTCTGAAAATACTCAAAATAGGCT 57.130 30.769 0.00 0.00 0.00 4.58
1682 2939 7.693132 AGATTCATGGGCTAAATTATGCTCTA 58.307 34.615 0.00 0.00 0.00 2.43
1724 2981 3.450457 TGGAAACAGCCAGTTGTGAAATT 59.550 39.130 0.00 0.00 41.19 1.82
1811 3068 3.894427 AGCTGAGACTGAGAAGAGTTCAA 59.106 43.478 0.00 0.00 0.00 2.69
1912 3169 4.550076 GCCAGAGCTCTGAATACCATAT 57.450 45.455 39.34 1.19 46.59 1.78
1978 3235 9.821662 GTCATGTTGTTAACTTGTTCTATAACC 57.178 33.333 7.22 0.00 37.68 2.85
2002 3259 7.347222 ACCCATCCTTCTATGTAACTGATGTTA 59.653 37.037 0.00 0.00 37.59 2.41
2024 3281 2.224378 CCTCGTGGTGGAATATCTGCAT 60.224 50.000 0.00 0.00 0.00 3.96
2070 3327 9.921637 CATCTTCCTATCTCTGTTTAGTATTCC 57.078 37.037 0.00 0.00 0.00 3.01
2071 3328 8.480133 TCTTCCTATCTCTGTTTAGTATTCCC 57.520 38.462 0.00 0.00 0.00 3.97
2072 3329 8.290277 TCTTCCTATCTCTGTTTAGTATTCCCT 58.710 37.037 0.00 0.00 0.00 4.20
2073 3330 8.480133 TTCCTATCTCTGTTTAGTATTCCCTC 57.520 38.462 0.00 0.00 0.00 4.30
2074 3331 7.011382 TCCTATCTCTGTTTAGTATTCCCTCC 58.989 42.308 0.00 0.00 0.00 4.30
2075 3332 5.793030 ATCTCTGTTTAGTATTCCCTCCG 57.207 43.478 0.00 0.00 0.00 4.63
2076 3333 4.607239 TCTCTGTTTAGTATTCCCTCCGT 58.393 43.478 0.00 0.00 0.00 4.69
2077 3334 4.643784 TCTCTGTTTAGTATTCCCTCCGTC 59.356 45.833 0.00 0.00 0.00 4.79
2078 3335 3.703052 TCTGTTTAGTATTCCCTCCGTCC 59.297 47.826 0.00 0.00 0.00 4.79
2079 3336 2.767960 TGTTTAGTATTCCCTCCGTCCC 59.232 50.000 0.00 0.00 0.00 4.46
2080 3337 2.767960 GTTTAGTATTCCCTCCGTCCCA 59.232 50.000 0.00 0.00 0.00 4.37
2081 3338 2.852714 TAGTATTCCCTCCGTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
2082 3339 1.961133 AGTATTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
2083 3340 2.271777 AGTATTCCCTCCGTCCCAAAA 58.728 47.619 0.00 0.00 0.00 2.44
2084 3341 2.850568 AGTATTCCCTCCGTCCCAAAAT 59.149 45.455 0.00 0.00 0.00 1.82
2085 3342 2.919772 ATTCCCTCCGTCCCAAAATT 57.080 45.000 0.00 0.00 0.00 1.82
2086 3343 2.209690 TTCCCTCCGTCCCAAAATTC 57.790 50.000 0.00 0.00 0.00 2.17
2087 3344 1.368374 TCCCTCCGTCCCAAAATTCT 58.632 50.000 0.00 0.00 0.00 2.40
2088 3345 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2089 3346 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2090 3347 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2091 3348 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2092 3349 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2093 3350 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2094 3351 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2095 3352 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
2096 3353 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
2097 3354 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
2098 3355 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
2099 3356 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
2100 3357 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
2101 3358 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
2102 3359 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
2103 3360 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
2111 3368 9.392259 TCTTGTCTTAGATTTGTCTAGATACGA 57.608 33.333 0.00 0.00 0.00 3.43
2112 3369 9.440784 CTTGTCTTAGATTTGTCTAGATACGAC 57.559 37.037 0.00 0.00 0.00 4.34
2113 3370 8.502105 TGTCTTAGATTTGTCTAGATACGACA 57.498 34.615 0.00 0.10 39.45 4.35
2114 3371 8.953313 TGTCTTAGATTTGTCTAGATACGACAA 58.047 33.333 0.00 1.82 46.34 3.18
2124 3381 8.502105 TGTCTAGATACGACAAATCTAAGACA 57.498 34.615 0.00 14.46 39.09 3.41
2125 3382 8.953313 TGTCTAGATACGACAAATCTAAGACAA 58.047 33.333 15.29 6.73 38.84 3.18
2126 3383 9.440784 GTCTAGATACGACAAATCTAAGACAAG 57.559 37.037 0.00 0.00 35.93 3.16
2127 3384 9.392259 TCTAGATACGACAAATCTAAGACAAGA 57.608 33.333 0.00 0.00 35.93 3.02
2130 3387 9.877178 AGATACGACAAATCTAAGACAAGAATT 57.123 29.630 0.00 0.00 31.88 2.17
2134 3391 8.076178 ACGACAAATCTAAGACAAGAATTTTGG 58.924 33.333 0.00 0.00 33.04 3.28
2135 3392 7.538678 CGACAAATCTAAGACAAGAATTTTGGG 59.461 37.037 0.00 0.00 33.04 4.12
2136 3393 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2137 3394 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
2138 3395 8.359642 CAAATCTAAGACAAGAATTTTGGGACA 58.640 33.333 5.68 0.00 28.49 4.02
2139 3396 7.693969 ATCTAAGACAAGAATTTTGGGACAG 57.306 36.000 5.68 0.00 42.39 3.51
2140 3397 6.837312 TCTAAGACAAGAATTTTGGGACAGA 58.163 36.000 5.68 0.00 42.39 3.41
2141 3398 6.936900 TCTAAGACAAGAATTTTGGGACAGAG 59.063 38.462 5.68 0.00 42.39 3.35
2142 3399 4.401925 AGACAAGAATTTTGGGACAGAGG 58.598 43.478 5.68 0.00 42.39 3.69
2143 3400 4.104738 AGACAAGAATTTTGGGACAGAGGA 59.895 41.667 5.68 0.00 42.39 3.71
2144 3401 4.401925 ACAAGAATTTTGGGACAGAGGAG 58.598 43.478 5.68 0.00 42.39 3.69
2145 3402 4.141158 ACAAGAATTTTGGGACAGAGGAGT 60.141 41.667 5.68 0.00 42.39 3.85
2146 3403 5.073144 ACAAGAATTTTGGGACAGAGGAGTA 59.927 40.000 5.68 0.00 42.39 2.59
2147 3404 6.183347 CAAGAATTTTGGGACAGAGGAGTAT 58.817 40.000 0.00 0.00 42.39 2.12
2148 3405 7.037586 ACAAGAATTTTGGGACAGAGGAGTATA 60.038 37.037 5.68 0.00 42.39 1.47
2149 3406 7.698163 AGAATTTTGGGACAGAGGAGTATAT 57.302 36.000 0.00 0.00 42.39 0.86
2150 3407 7.512992 AGAATTTTGGGACAGAGGAGTATATG 58.487 38.462 0.00 0.00 42.39 1.78
2377 3635 5.625197 GCCAGAGACTTTTACCGTACCAATA 60.625 44.000 0.00 0.00 0.00 1.90
2410 3668 4.156739 GGGGAAGACATAAAGAACTTGCAG 59.843 45.833 0.00 0.00 33.58 4.41
2747 4005 2.103094 CCGAATGCTAGGATTGTCCAGA 59.897 50.000 14.86 0.00 39.61 3.86
2797 4055 6.260050 TGTCAGTTAAGGCAAGTACTTTTCAG 59.740 38.462 5.07 0.00 0.00 3.02
2957 4215 3.038788 ACACATCGACAGTGCATAACA 57.961 42.857 17.10 0.00 40.59 2.41
2998 4256 1.075542 TTGCGTACTCTTGATTGGCG 58.924 50.000 0.00 0.00 0.00 5.69
3000 4258 0.645868 GCGTACTCTTGATTGGCGTC 59.354 55.000 0.00 0.00 0.00 5.19
3020 5214 5.616424 GCGTCTTAGCCATTCATGAATCATC 60.616 44.000 18.16 9.91 0.00 2.92
3183 5407 3.609175 CGGTTGTTAAGCATGTCCTTGTG 60.609 47.826 0.00 0.00 0.00 3.33
3199 5423 7.699566 TGTCCTTGTGATGTAAGTGTTTTTAC 58.300 34.615 0.00 0.00 34.78 2.01
3246 5470 6.985653 AGTATCTGGCTGTACATTAGTCAT 57.014 37.500 0.00 0.00 0.00 3.06
3751 6010 4.017126 CAGGGGTTTCTAATCCCAACTTC 58.983 47.826 10.26 0.00 45.06 3.01
3789 6048 2.350772 GGCAACAGGAAATCTTGTCACG 60.351 50.000 0.00 0.00 34.96 4.35
3802 6061 5.339008 TCTTGTCACGGCTAAATCTACAT 57.661 39.130 0.00 0.00 0.00 2.29
3942 6201 6.479990 TGAGTCTGAACCTGATATATTTTGCG 59.520 38.462 0.00 0.00 0.00 4.85
3943 6202 5.760253 AGTCTGAACCTGATATATTTTGCGG 59.240 40.000 0.00 0.00 0.00 5.69
4046 6305 0.473755 TTCTTCTTGCAGCTGACCCA 59.526 50.000 20.43 2.58 0.00 4.51
4050 6309 1.376942 CTTGCAGCTGACCCAGAGG 60.377 63.158 20.43 0.00 40.04 3.69
4052 6311 3.715097 GCAGCTGACCCAGAGGCT 61.715 66.667 20.43 0.00 36.11 4.58
4106 6365 0.036164 TTGGCGCAAAAGCTCCTCTA 59.964 50.000 10.83 0.00 37.29 2.43
4351 6610 6.808321 ATCTACTGCCTAGGATGTTAACAA 57.192 37.500 14.75 0.00 0.00 2.83
4366 6625 8.739972 GGATGTTAACAATTTGTGATAACTCCT 58.260 33.333 13.23 8.59 42.84 3.69
4442 6704 6.127619 GGATGAATCCCGAGTTTTGATCTTTT 60.128 38.462 0.00 0.00 41.20 2.27
4443 6705 6.012658 TGAATCCCGAGTTTTGATCTTTTG 57.987 37.500 0.00 0.00 0.00 2.44
4452 6714 5.308014 AGTTTTGATCTTTTGCCATTTCCC 58.692 37.500 0.00 0.00 0.00 3.97
4458 6720 5.129155 TGATCTTTTGCCATTTCCCCTATTG 59.871 40.000 0.00 0.00 0.00 1.90
4460 6722 4.843516 TCTTTTGCCATTTCCCCTATTGTT 59.156 37.500 0.00 0.00 0.00 2.83
4463 6725 3.784178 TGCCATTTCCCCTATTGTTTGA 58.216 40.909 0.00 0.00 0.00 2.69
4464 6726 3.513515 TGCCATTTCCCCTATTGTTTGAC 59.486 43.478 0.00 0.00 0.00 3.18
4465 6727 3.513515 GCCATTTCCCCTATTGTTTGACA 59.486 43.478 0.00 0.00 0.00 3.58
4472 6734 3.573967 CCCCTATTGTTTGACAAGCAACT 59.426 43.478 18.19 10.85 41.94 3.16
4475 6737 5.473504 CCCTATTGTTTGACAAGCAACTAGT 59.526 40.000 18.19 6.70 41.94 2.57
4477 6739 7.148407 CCCTATTGTTTGACAAGCAACTAGTAG 60.148 40.741 18.19 14.88 41.94 2.57
4478 6740 7.602644 CCTATTGTTTGACAAGCAACTAGTAGA 59.397 37.037 18.19 0.00 41.94 2.59
4479 6741 7.801716 ATTGTTTGACAAGCAACTAGTAGAA 57.198 32.000 18.19 0.00 41.94 2.10
4480 6742 7.801716 TTGTTTGACAAGCAACTAGTAGAAT 57.198 32.000 12.80 0.00 35.91 2.40
4481 6743 7.801716 TGTTTGACAAGCAACTAGTAGAATT 57.198 32.000 3.59 0.00 35.91 2.17
4482 6744 7.639039 TGTTTGACAAGCAACTAGTAGAATTG 58.361 34.615 3.59 2.31 35.91 2.32
4483 6745 7.497579 TGTTTGACAAGCAACTAGTAGAATTGA 59.502 33.333 3.59 0.00 35.91 2.57
4484 6746 7.421530 TTGACAAGCAACTAGTAGAATTGAC 57.578 36.000 3.59 9.70 0.00 3.18
4488 6751 8.709386 ACAAGCAACTAGTAGAATTGACTATG 57.291 34.615 3.59 0.49 0.00 2.23
4499 6762 6.425210 AGAATTGACTATGTATAGCCTGCA 57.575 37.500 0.00 0.00 33.68 4.41
4505 6768 5.718607 TGACTATGTATAGCCTGCATGATCT 59.281 40.000 0.00 0.00 33.68 2.75
4507 6770 5.718607 ACTATGTATAGCCTGCATGATCTGA 59.281 40.000 0.00 0.00 33.68 3.27
4508 6771 4.961438 TGTATAGCCTGCATGATCTGAA 57.039 40.909 0.00 0.00 0.00 3.02
4512 6775 7.627311 TGTATAGCCTGCATGATCTGAATATT 58.373 34.615 0.00 0.00 0.00 1.28
4532 6795 5.545658 ATTAGAGGCGTTTTACACATGTG 57.454 39.130 24.25 24.25 0.00 3.21
4539 6802 4.286910 GCGTTTTACACATGTGACATGTT 58.713 39.130 31.94 19.66 0.00 2.71
4556 6819 7.488471 GTGACATGTTACTCCTGTGTTAGTATC 59.512 40.741 13.20 0.00 0.00 2.24
4566 6829 5.053145 CCTGTGTTAGTATCAGATCAAGGC 58.947 45.833 0.00 0.00 0.00 4.35
4569 6832 5.358725 TGTGTTAGTATCAGATCAAGGCGTA 59.641 40.000 0.00 0.00 0.00 4.42
4578 6841 7.897575 ATCAGATCAAGGCGTATCTTAAATC 57.102 36.000 0.00 0.00 29.93 2.17
4586 6849 4.003648 GGCGTATCTTAAATCATCCTGGG 58.996 47.826 0.00 0.00 0.00 4.45
4590 6853 6.758886 GCGTATCTTAAATCATCCTGGGATAG 59.241 42.308 1.42 0.00 32.93 2.08
4630 6893 5.183713 TCTGGGCAATGAATGTACAAAGAAG 59.816 40.000 0.00 0.00 0.00 2.85
4640 6903 8.500753 TGAATGTACAAAGAAGTGTAAGTTGT 57.499 30.769 0.00 0.00 35.79 3.32
4645 6908 8.070007 GTACAAAGAAGTGTAAGTTGTACTCC 57.930 38.462 14.59 0.00 45.60 3.85
4646 6909 6.053650 ACAAAGAAGTGTAAGTTGTACTCCC 58.946 40.000 0.00 0.00 30.88 4.30
4647 6910 6.126854 ACAAAGAAGTGTAAGTTGTACTCCCT 60.127 38.462 0.00 0.00 30.88 4.20
4648 6911 5.725325 AGAAGTGTAAGTTGTACTCCCTC 57.275 43.478 0.00 0.00 0.00 4.30
4649 6912 5.395611 AGAAGTGTAAGTTGTACTCCCTCT 58.604 41.667 0.00 0.00 0.00 3.69
4650 6913 5.244178 AGAAGTGTAAGTTGTACTCCCTCTG 59.756 44.000 0.00 0.00 0.00 3.35
4651 6914 4.481072 AGTGTAAGTTGTACTCCCTCTGT 58.519 43.478 0.00 0.00 0.00 3.41
4652 6915 4.900054 AGTGTAAGTTGTACTCCCTCTGTT 59.100 41.667 0.00 0.00 0.00 3.16
4653 6916 5.010820 AGTGTAAGTTGTACTCCCTCTGTTC 59.989 44.000 0.00 0.00 0.00 3.18
4654 6917 3.662247 AAGTTGTACTCCCTCTGTTCG 57.338 47.619 0.00 0.00 0.00 3.95
4655 6918 1.893801 AGTTGTACTCCCTCTGTTCGG 59.106 52.381 0.00 0.00 0.00 4.30
4656 6919 1.891150 GTTGTACTCCCTCTGTTCGGA 59.109 52.381 0.00 0.00 0.00 4.55
4657 6920 2.297698 TGTACTCCCTCTGTTCGGAA 57.702 50.000 0.00 0.00 0.00 4.30
4658 6921 2.816411 TGTACTCCCTCTGTTCGGAAT 58.184 47.619 0.00 0.00 0.00 3.01
4659 6922 3.170717 TGTACTCCCTCTGTTCGGAATT 58.829 45.455 0.00 0.00 0.00 2.17
4660 6923 4.346730 TGTACTCCCTCTGTTCGGAATTA 58.653 43.478 0.00 0.00 0.00 1.40
4661 6924 3.889520 ACTCCCTCTGTTCGGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
4662 6925 3.442076 ACTCCCTCTGTTCGGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
4663 6926 3.447944 ACTCCCTCTGTTCGGAATTACTC 59.552 47.826 0.00 0.00 0.00 2.59
4664 6927 2.426024 TCCCTCTGTTCGGAATTACTCG 59.574 50.000 0.00 0.00 0.00 4.18
4665 6928 2.165845 CCCTCTGTTCGGAATTACTCGT 59.834 50.000 0.00 0.00 0.00 4.18
4666 6929 3.436496 CCTCTGTTCGGAATTACTCGTC 58.564 50.000 0.00 0.00 0.00 4.20
4667 6930 3.099362 CTCTGTTCGGAATTACTCGTCG 58.901 50.000 0.00 0.00 0.00 5.12
4668 6931 2.743664 TCTGTTCGGAATTACTCGTCGA 59.256 45.455 0.00 0.00 0.00 4.20
4669 6932 3.189080 TCTGTTCGGAATTACTCGTCGAA 59.811 43.478 0.00 0.00 37.48 3.71
4670 6933 3.495193 TGTTCGGAATTACTCGTCGAAG 58.505 45.455 0.00 0.00 39.89 3.79
4671 6934 3.058016 TGTTCGGAATTACTCGTCGAAGT 60.058 43.478 0.00 0.00 39.89 3.01
4672 6935 3.837213 TCGGAATTACTCGTCGAAGTT 57.163 42.857 0.00 0.00 0.00 2.66
4673 6936 4.944962 TCGGAATTACTCGTCGAAGTTA 57.055 40.909 0.00 0.00 0.00 2.24
4674 6937 4.651994 TCGGAATTACTCGTCGAAGTTAC 58.348 43.478 0.00 0.00 0.00 2.50
4675 6938 4.393062 TCGGAATTACTCGTCGAAGTTACT 59.607 41.667 0.00 0.00 0.00 2.24
4676 6939 4.727655 CGGAATTACTCGTCGAAGTTACTC 59.272 45.833 0.00 0.00 0.00 2.59
4677 6940 4.727655 GGAATTACTCGTCGAAGTTACTCG 59.272 45.833 0.00 0.00 40.25 4.18
4678 6941 4.935885 ATTACTCGTCGAAGTTACTCGT 57.064 40.909 0.00 0.00 39.84 4.18
4679 6942 2.871263 ACTCGTCGAAGTTACTCGTC 57.129 50.000 0.00 0.00 39.84 4.20
4680 6943 1.125748 ACTCGTCGAAGTTACTCGTCG 59.874 52.381 13.48 13.48 46.69 5.12
4690 6953 6.686130 GAAGTTACTCGTCGAAGAAATGAA 57.314 37.500 1.95 0.00 39.69 2.57
4691 6954 7.279470 GAAGTTACTCGTCGAAGAAATGAAT 57.721 36.000 1.95 0.00 39.69 2.57
4692 6955 6.633668 AGTTACTCGTCGAAGAAATGAATG 57.366 37.500 1.95 0.00 39.69 2.67
4693 6956 6.157211 AGTTACTCGTCGAAGAAATGAATGT 58.843 36.000 1.95 0.00 39.69 2.71
4694 6957 7.310664 AGTTACTCGTCGAAGAAATGAATGTA 58.689 34.615 1.95 0.00 39.69 2.29
4695 6958 7.974501 AGTTACTCGTCGAAGAAATGAATGTAT 59.025 33.333 1.95 0.00 39.69 2.29
4696 6959 6.814076 ACTCGTCGAAGAAATGAATGTATC 57.186 37.500 1.95 0.00 39.69 2.24
4697 6960 6.565234 ACTCGTCGAAGAAATGAATGTATCT 58.435 36.000 1.95 0.00 39.69 1.98
4698 6961 7.704271 ACTCGTCGAAGAAATGAATGTATCTA 58.296 34.615 1.95 0.00 39.69 1.98
4699 6962 7.858382 ACTCGTCGAAGAAATGAATGTATCTAG 59.142 37.037 1.95 0.00 39.69 2.43
4700 6963 7.927048 TCGTCGAAGAAATGAATGTATCTAGA 58.073 34.615 0.00 0.00 39.69 2.43
4701 6964 8.568794 TCGTCGAAGAAATGAATGTATCTAGAT 58.431 33.333 10.73 10.73 39.69 1.98
4702 6965 8.634265 CGTCGAAGAAATGAATGTATCTAGATG 58.366 37.037 15.79 0.00 39.69 2.90
4703 6966 9.469807 GTCGAAGAAATGAATGTATCTAGATGT 57.530 33.333 15.79 0.00 39.69 3.06
4734 6997 8.862325 AGTTGTAGATACATCCATTTTTGTGA 57.138 30.769 0.00 0.00 35.89 3.58
4735 6998 8.730680 AGTTGTAGATACATCCATTTTTGTGAC 58.269 33.333 0.00 0.00 35.89 3.67
4736 6999 8.511321 GTTGTAGATACATCCATTTTTGTGACA 58.489 33.333 0.00 0.00 35.89 3.58
4737 7000 8.628630 TGTAGATACATCCATTTTTGTGACAA 57.371 30.769 0.00 0.00 0.00 3.18
4738 7001 8.729756 TGTAGATACATCCATTTTTGTGACAAG 58.270 33.333 0.00 0.00 0.00 3.16
4739 7002 7.765695 AGATACATCCATTTTTGTGACAAGT 57.234 32.000 0.00 0.00 0.00 3.16
4740 7003 8.862325 AGATACATCCATTTTTGTGACAAGTA 57.138 30.769 0.00 0.00 0.00 2.24
4741 7004 9.295825 AGATACATCCATTTTTGTGACAAGTAA 57.704 29.630 0.00 0.00 0.00 2.24
4744 7007 8.816640 ACATCCATTTTTGTGACAAGTAATTC 57.183 30.769 0.00 0.00 0.00 2.17
4745 7008 7.872483 ACATCCATTTTTGTGACAAGTAATTCC 59.128 33.333 0.00 0.00 0.00 3.01
4746 7009 7.353414 TCCATTTTTGTGACAAGTAATTCCA 57.647 32.000 0.00 0.00 0.00 3.53
4747 7010 7.786030 TCCATTTTTGTGACAAGTAATTCCAA 58.214 30.769 0.00 0.00 0.00 3.53
4748 7011 8.260818 TCCATTTTTGTGACAAGTAATTCCAAA 58.739 29.630 0.00 0.00 0.00 3.28
4749 7012 8.334632 CCATTTTTGTGACAAGTAATTCCAAAC 58.665 33.333 0.00 0.00 0.00 2.93
4750 7013 7.513190 TTTTTGTGACAAGTAATTCCAAACG 57.487 32.000 0.00 0.00 0.00 3.60
4751 7014 4.822036 TGTGACAAGTAATTCCAAACGG 57.178 40.909 0.00 0.00 0.00 4.44
4752 7015 4.452825 TGTGACAAGTAATTCCAAACGGA 58.547 39.130 0.00 0.00 0.00 4.69
4753 7016 4.513692 TGTGACAAGTAATTCCAAACGGAG 59.486 41.667 0.00 0.00 32.88 4.63
4754 7017 4.069304 TGACAAGTAATTCCAAACGGAGG 58.931 43.478 0.00 0.00 32.88 4.30
4755 7018 3.418047 ACAAGTAATTCCAAACGGAGGG 58.582 45.455 0.00 0.00 32.88 4.30
4756 7019 3.073356 ACAAGTAATTCCAAACGGAGGGA 59.927 43.478 0.00 0.00 32.88 4.20
4757 7020 3.629142 AGTAATTCCAAACGGAGGGAG 57.371 47.619 0.00 0.00 34.02 4.30
4758 7021 2.910977 AGTAATTCCAAACGGAGGGAGT 59.089 45.455 0.00 0.00 34.02 3.85
4759 7022 4.098894 AGTAATTCCAAACGGAGGGAGTA 58.901 43.478 0.00 0.00 34.02 2.59
4760 7023 3.345508 AATTCCAAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 34.02 2.73
4761 7024 2.019807 TTCCAAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 34.02 2.73
4762 7025 2.905415 TCCAAACGGAGGGAGTACTA 57.095 50.000 0.00 0.00 0.00 1.82
4763 7026 3.173953 TCCAAACGGAGGGAGTACTAA 57.826 47.619 0.00 0.00 0.00 2.24
4764 7027 3.509442 TCCAAACGGAGGGAGTACTAAA 58.491 45.455 0.00 0.00 0.00 1.85
4777 7040 9.145442 GAGGGAGTACTAAATACTAATCCTGTT 57.855 37.037 0.00 0.00 44.64 3.16
4790 7053 9.712305 ATACTAATCCTGTTGTGTCATATTAGC 57.288 33.333 0.00 0.00 32.52 3.09
4792 7055 3.792401 TCCTGTTGTGTCATATTAGCCG 58.208 45.455 0.00 0.00 0.00 5.52
4822 7089 4.439057 GGGTAATCTGCAATCTCGTAACA 58.561 43.478 0.00 0.00 0.00 2.41
4899 7284 8.040132 AGATAAGAAAGAGTTGACATCTTCAGG 58.960 37.037 0.00 0.00 35.98 3.86
4918 7303 1.762957 GGCCCATAGCACAGAACTCTA 59.237 52.381 0.00 0.00 46.50 2.43
4923 7308 5.011125 GCCCATAGCACAGAACTCTAATCTA 59.989 44.000 0.00 0.00 42.97 1.98
4924 7309 6.463049 GCCCATAGCACAGAACTCTAATCTAA 60.463 42.308 0.00 0.00 42.97 2.10
4925 7310 7.675062 CCCATAGCACAGAACTCTAATCTAAT 58.325 38.462 0.00 0.00 0.00 1.73
4926 7311 7.816995 CCCATAGCACAGAACTCTAATCTAATC 59.183 40.741 0.00 0.00 0.00 1.75
4927 7312 8.584157 CCATAGCACAGAACTCTAATCTAATCT 58.416 37.037 0.00 0.00 0.00 2.40
4975 7368 5.207768 CACAATCGCAGGCATAAATAGAAC 58.792 41.667 0.00 0.00 0.00 3.01
5091 7484 9.162764 AGTATGAAGTATTTACACAACCATCAC 57.837 33.333 0.00 0.00 0.00 3.06
5106 7499 0.747255 ATCACGGAGAGATGGGAACG 59.253 55.000 0.00 0.00 36.27 3.95
5107 7500 0.323087 TCACGGAGAGATGGGAACGA 60.323 55.000 0.00 0.00 0.00 3.85
5113 7506 1.201647 GAGAGATGGGAACGAACGACA 59.798 52.381 0.14 0.00 0.00 4.35
5121 7514 2.613725 GGGAACGAACGACACCCTAATT 60.614 50.000 15.33 0.00 37.75 1.40
5178 7571 3.754965 TGGACAGGATCACCAAAGAAAG 58.245 45.455 0.00 0.00 38.94 2.62
5181 7574 4.263068 GGACAGGATCACCAAAGAAAGAGA 60.263 45.833 0.00 0.00 38.94 3.10
5182 7575 4.904241 ACAGGATCACCAAAGAAAGAGAG 58.096 43.478 0.00 0.00 38.94 3.20
5183 7576 4.594920 ACAGGATCACCAAAGAAAGAGAGA 59.405 41.667 0.00 0.00 38.94 3.10
5184 7577 5.072329 ACAGGATCACCAAAGAAAGAGAGAA 59.928 40.000 0.00 0.00 38.94 2.87
5185 7578 6.000219 CAGGATCACCAAAGAAAGAGAGAAA 59.000 40.000 0.00 0.00 38.94 2.52
5186 7579 6.149142 CAGGATCACCAAAGAAAGAGAGAAAG 59.851 42.308 0.00 0.00 38.94 2.62
5187 7580 5.414144 GGATCACCAAAGAAAGAGAGAAAGG 59.586 44.000 0.00 0.00 35.97 3.11
5188 7581 5.630415 TCACCAAAGAAAGAGAGAAAGGA 57.370 39.130 0.00 0.00 0.00 3.36
5189 7582 6.001449 TCACCAAAGAAAGAGAGAAAGGAA 57.999 37.500 0.00 0.00 0.00 3.36
5190 7583 6.423182 TCACCAAAGAAAGAGAGAAAGGAAA 58.577 36.000 0.00 0.00 0.00 3.13
5191 7584 6.889722 TCACCAAAGAAAGAGAGAAAGGAAAA 59.110 34.615 0.00 0.00 0.00 2.29
5192 7585 7.067494 TCACCAAAGAAAGAGAGAAAGGAAAAG 59.933 37.037 0.00 0.00 0.00 2.27
5193 7586 7.067494 CACCAAAGAAAGAGAGAAAGGAAAAGA 59.933 37.037 0.00 0.00 0.00 2.52
5194 7587 7.615757 ACCAAAGAAAGAGAGAAAGGAAAAGAA 59.384 33.333 0.00 0.00 0.00 2.52
5259 7657 0.099082 GACGACGACCCAGCTAGAAG 59.901 60.000 0.00 0.00 0.00 2.85
5260 7658 1.313812 ACGACGACCCAGCTAGAAGG 61.314 60.000 0.00 0.00 0.00 3.46
5261 7659 1.030488 CGACGACCCAGCTAGAAGGA 61.030 60.000 0.00 0.00 0.00 3.36
5315 7713 4.996434 CCGCCGATGGAGATGGCC 62.996 72.222 0.00 0.00 46.12 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.828868 GGCGGGCCATCACTATGA 59.171 61.111 4.39 0.00 34.84 2.15
1 2 2.666190 CGGCGGGCCATCACTATG 60.666 66.667 4.39 0.00 35.37 2.23
2 3 4.626081 GCGGCGGGCCATCACTAT 62.626 66.667 9.78 0.00 35.37 2.12
24 25 1.972588 AGCAGTTGGAGGGTTAGGAT 58.027 50.000 0.00 0.00 0.00 3.24
44 45 2.270205 CCGCTGCCCTTGATGAGT 59.730 61.111 0.00 0.00 0.00 3.41
48 49 0.037590 TAAACACCGCTGCCCTTGAT 59.962 50.000 0.00 0.00 0.00 2.57
56 57 1.626654 CGAGGCACTAAACACCGCTG 61.627 60.000 0.00 0.00 41.55 5.18
80 83 4.602259 CGTGTCTGTGGCACCGGT 62.602 66.667 16.26 0.00 33.61 5.28
91 94 2.628178 TCAGATTCAGGTGTTCGTGTCT 59.372 45.455 0.00 0.00 0.00 3.41
131 134 3.150335 CTAGCCCGCTGCCTCTCA 61.150 66.667 0.00 0.00 42.71 3.27
263 267 4.697514 CGTCCATCTCCATTGTCATAAGT 58.302 43.478 0.00 0.00 0.00 2.24
329 336 2.668457 CTCGCATGTTGACTACTCCAAC 59.332 50.000 0.00 0.00 42.96 3.77
330 337 2.353704 CCTCGCATGTTGACTACTCCAA 60.354 50.000 0.00 0.00 0.00 3.53
332 339 1.927895 CCTCGCATGTTGACTACTCC 58.072 55.000 0.00 0.00 0.00 3.85
342 349 2.434884 CTCCAACGCCTCGCATGT 60.435 61.111 0.00 0.00 0.00 3.21
377 384 1.743252 CTTCAGCTTGACCGCCCTC 60.743 63.158 0.00 0.00 0.00 4.30
385 392 1.552337 CCTGCTACCTCTTCAGCTTGA 59.448 52.381 0.00 0.00 38.63 3.02
414 421 2.041081 TGAAACCCACCATCTTCCGAAT 59.959 45.455 0.00 0.00 0.00 3.34
431 438 3.515502 AGGACAATGAGGAGTCGATGAAA 59.484 43.478 0.00 0.00 35.63 2.69
446 453 2.354103 CGTCAGTGATGTGGAGGACAAT 60.354 50.000 4.02 0.00 38.36 2.71
448 455 0.603065 CGTCAGTGATGTGGAGGACA 59.397 55.000 4.02 0.00 39.53 4.02
515 522 0.535335 TTCTGGTCACCGATGCCTAC 59.465 55.000 0.00 0.00 0.00 3.18
516 523 0.824109 CTTCTGGTCACCGATGCCTA 59.176 55.000 0.00 0.00 0.00 3.93
517 524 1.599047 CTTCTGGTCACCGATGCCT 59.401 57.895 0.00 0.00 0.00 4.75
518 525 1.450312 CCTTCTGGTCACCGATGCC 60.450 63.158 0.00 0.00 0.00 4.40
522 529 1.701031 TTTGCCCTTCTGGTCACCGA 61.701 55.000 0.00 0.00 36.04 4.69
549 556 2.922234 CCAAGAGGGCCCTCCATC 59.078 66.667 42.54 23.55 43.70 3.51
611 823 0.171007 ATTCATGCCGACCAAAAGCG 59.829 50.000 0.00 0.00 0.00 4.68
637 849 2.778679 CGGTCAGCGCTGCTTAAC 59.221 61.111 32.44 23.64 36.40 2.01
664 876 5.393461 CCTCTTTCTTGTCTGCACACTTTTT 60.393 40.000 0.00 0.00 29.76 1.94
665 877 4.096984 CCTCTTTCTTGTCTGCACACTTTT 59.903 41.667 0.00 0.00 29.76 2.27
679 891 3.309193 GGCCTATCCAAACCCTCTTTCTT 60.309 47.826 0.00 0.00 34.01 2.52
682 894 2.000048 TGGCCTATCCAAACCCTCTTT 59.000 47.619 3.32 0.00 43.21 2.52
708 920 2.785258 GTCCCGCAAGCATTCGAC 59.215 61.111 0.00 0.00 0.00 4.20
722 934 1.024579 ATGGATTCGCACAACCGTCC 61.025 55.000 0.00 0.00 0.00 4.79
726 938 0.243365 TTGCATGGATTCGCACAACC 59.757 50.000 0.00 0.00 38.00 3.77
729 941 0.109179 GCTTTGCATGGATTCGCACA 60.109 50.000 0.00 0.00 38.00 4.57
730 942 0.803380 GGCTTTGCATGGATTCGCAC 60.803 55.000 0.00 0.00 38.00 5.34
732 944 1.227060 GGGCTTTGCATGGATTCGC 60.227 57.895 0.00 0.00 0.00 4.70
733 945 1.334869 GTAGGGCTTTGCATGGATTCG 59.665 52.381 0.00 0.00 0.00 3.34
737 949 1.214305 AGGGTAGGGCTTTGCATGGA 61.214 55.000 0.00 0.00 0.00 3.41
738 950 0.550914 TAGGGTAGGGCTTTGCATGG 59.449 55.000 0.00 0.00 0.00 3.66
740 952 3.688049 AATTAGGGTAGGGCTTTGCAT 57.312 42.857 0.00 0.00 0.00 3.96
768 980 8.575649 ACGGACCATCATTTTTCTACTAAATT 57.424 30.769 0.00 0.00 0.00 1.82
769 981 7.011109 CGACGGACCATCATTTTTCTACTAAAT 59.989 37.037 0.00 0.00 0.00 1.40
774 986 3.308866 CCGACGGACCATCATTTTTCTAC 59.691 47.826 8.64 0.00 0.00 2.59
783 995 1.391933 CCATCTCCGACGGACCATCA 61.392 60.000 13.88 0.00 0.00 3.07
784 996 1.364171 CCATCTCCGACGGACCATC 59.636 63.158 13.88 0.00 0.00 3.51
785 997 2.797278 GCCATCTCCGACGGACCAT 61.797 63.158 13.88 5.06 0.00 3.55
787 999 4.222847 GGCCATCTCCGACGGACC 62.223 72.222 13.88 8.73 0.00 4.46
788 1000 3.432051 CTGGCCATCTCCGACGGAC 62.432 68.421 13.88 2.27 0.00 4.79
789 1001 3.147595 CTGGCCATCTCCGACGGA 61.148 66.667 17.28 17.28 0.00 4.69
790 1002 3.461773 ACTGGCCATCTCCGACGG 61.462 66.667 5.51 7.84 0.00 4.79
791 1003 2.202797 CACTGGCCATCTCCGACG 60.203 66.667 5.51 0.00 0.00 5.12
805 1017 4.988598 CAGCGGACCAACGGCACT 62.989 66.667 0.00 0.00 45.30 4.40
806 1018 4.980805 TCAGCGGACCAACGGCAC 62.981 66.667 0.00 0.00 45.30 5.01
807 1019 4.980805 GTCAGCGGACCAACGGCA 62.981 66.667 5.60 0.00 45.30 5.69
808 1020 4.980805 TGTCAGCGGACCAACGGC 62.981 66.667 14.62 0.00 43.65 5.68
809 1021 2.047274 ATGTCAGCGGACCAACGG 60.047 61.111 14.62 0.00 43.65 4.44
810 1022 1.667830 ACATGTCAGCGGACCAACG 60.668 57.895 14.62 2.90 43.65 4.10
811 1023 1.577328 CCACATGTCAGCGGACCAAC 61.577 60.000 14.62 0.00 43.65 3.77
813 1025 2.347114 CCACATGTCAGCGGACCA 59.653 61.111 14.62 3.25 43.65 4.02
814 1026 2.436646 CCCACATGTCAGCGGACC 60.437 66.667 14.62 0.00 43.65 4.46
818 1030 3.129502 CTGGCCCACATGTCAGCG 61.130 66.667 0.00 0.00 0.00 5.18
819 1031 2.753043 CCTGGCCCACATGTCAGC 60.753 66.667 0.00 7.90 0.00 4.26
820 1032 0.540365 AAACCTGGCCCACATGTCAG 60.540 55.000 0.00 0.00 0.00 3.51
822 1034 1.250840 GGAAACCTGGCCCACATGTC 61.251 60.000 0.00 0.00 0.00 3.06
823 1035 1.228862 GGAAACCTGGCCCACATGT 60.229 57.895 0.00 0.00 0.00 3.21
824 1036 2.342650 CGGAAACCTGGCCCACATG 61.343 63.158 0.00 0.00 0.00 3.21
825 1037 2.035626 CGGAAACCTGGCCCACAT 59.964 61.111 0.00 0.00 0.00 3.21
826 1038 4.278513 CCGGAAACCTGGCCCACA 62.279 66.667 0.00 0.00 0.00 4.17
843 1055 4.643387 ACTCACACTTGGGCCCGC 62.643 66.667 19.37 0.00 0.00 6.13
845 1057 1.302832 CTGACTCACACTTGGGCCC 60.303 63.158 17.59 17.59 0.00 5.80
846 1058 1.968540 GCTGACTCACACTTGGGCC 60.969 63.158 0.00 0.00 0.00 5.80
847 1059 2.320587 CGCTGACTCACACTTGGGC 61.321 63.158 0.00 0.00 0.00 5.36
848 1060 0.249868 TTCGCTGACTCACACTTGGG 60.250 55.000 0.00 0.00 0.00 4.12
849 1061 0.861837 GTTCGCTGACTCACACTTGG 59.138 55.000 0.00 0.00 0.00 3.61
850 1062 1.524355 CTGTTCGCTGACTCACACTTG 59.476 52.381 0.00 0.00 0.00 3.16
851 1063 1.858091 CTGTTCGCTGACTCACACTT 58.142 50.000 0.00 0.00 0.00 3.16
852 1064 0.598680 GCTGTTCGCTGACTCACACT 60.599 55.000 0.00 0.00 35.14 3.55
853 1065 0.875908 TGCTGTTCGCTGACTCACAC 60.876 55.000 0.00 0.00 40.11 3.82
854 1066 0.598419 CTGCTGTTCGCTGACTCACA 60.598 55.000 0.00 0.00 39.69 3.58
855 1067 1.895280 GCTGCTGTTCGCTGACTCAC 61.895 60.000 0.00 0.00 39.69 3.51
857 1069 1.624865 CTGCTGCTGTTCGCTGACTC 61.625 60.000 0.00 0.00 39.69 3.36
858 1070 1.667191 CTGCTGCTGTTCGCTGACT 60.667 57.895 0.00 0.00 39.69 3.41
859 1071 2.675056 CCTGCTGCTGTTCGCTGAC 61.675 63.158 0.00 0.00 39.69 3.51
860 1072 2.357881 CCTGCTGCTGTTCGCTGA 60.358 61.111 0.00 0.00 39.69 4.26
861 1073 3.429141 CCCTGCTGCTGTTCGCTG 61.429 66.667 0.00 0.00 40.11 5.18
862 1074 3.946201 ACCCTGCTGCTGTTCGCT 61.946 61.111 0.00 0.00 40.11 4.93
863 1075 3.730761 CACCCTGCTGCTGTTCGC 61.731 66.667 0.00 0.00 39.77 4.70
865 1077 3.368571 GGCACCCTGCTGCTGTTC 61.369 66.667 0.00 0.00 44.28 3.18
881 1093 2.365095 GAAGATCCCCTGCCGTACGG 62.365 65.000 30.06 30.06 38.57 4.02
882 1094 1.067582 GAAGATCCCCTGCCGTACG 59.932 63.158 8.69 8.69 0.00 3.67
883 1095 1.067582 CGAAGATCCCCTGCCGTAC 59.932 63.158 0.00 0.00 0.00 3.67
885 1097 2.683933 ACGAAGATCCCCTGCCGT 60.684 61.111 0.00 0.00 32.60 5.68
886 1098 2.107141 GACGAAGATCCCCTGCCG 59.893 66.667 0.00 0.00 0.00 5.69
887 1099 2.506472 GGACGAAGATCCCCTGCC 59.494 66.667 0.00 0.00 31.94 4.85
888 1100 2.107141 CGGACGAAGATCCCCTGC 59.893 66.667 0.00 0.00 35.03 4.85
891 1103 2.412112 CGACGGACGAAGATCCCC 59.588 66.667 0.00 0.00 45.77 4.81
894 1106 0.945813 ATCTCCGACGGACGAAGATC 59.054 55.000 13.88 0.00 45.77 2.75
895 1107 0.663688 CATCTCCGACGGACGAAGAT 59.336 55.000 13.88 11.45 45.77 2.40
896 1108 1.989966 GCATCTCCGACGGACGAAGA 61.990 60.000 13.88 9.38 45.77 2.87
897 1109 1.586564 GCATCTCCGACGGACGAAG 60.587 63.158 13.88 12.45 45.77 3.79
900 1112 4.570663 GGGCATCTCCGACGGACG 62.571 72.222 13.88 9.65 42.18 4.79
1417 2671 7.857456 ACCACATTACTCCAGAACATATAACA 58.143 34.615 0.00 0.00 0.00 2.41
1433 2687 9.042008 ACAATCACGATTAATCTACCACATTAC 57.958 33.333 13.45 0.00 0.00 1.89
1445 2699 7.094634 GCATTCCCTATGACAATCACGATTAAT 60.095 37.037 0.00 0.00 36.26 1.40
1455 2709 4.356405 TCGATGCATTCCCTATGACAAT 57.644 40.909 0.00 0.00 36.26 2.71
1460 2714 5.991606 TCTTAAGTTCGATGCATTCCCTATG 59.008 40.000 0.00 0.00 37.31 2.23
1463 2717 4.487714 TCTTAAGTTCGATGCATTCCCT 57.512 40.909 0.00 0.00 0.00 4.20
1505 2759 3.623060 CGCATTGTTACCAGTTATGCTCT 59.377 43.478 0.00 0.00 39.45 4.09
1682 2939 4.021544 TCCAACAGAAAACAGCAACAGTTT 60.022 37.500 0.00 0.00 40.66 2.66
1709 2966 7.701539 TCATATTGTAATTTCACAACTGGCT 57.298 32.000 0.00 0.00 41.02 4.75
1724 2981 8.164733 TCACCAACCCTTAGTTTTCATATTGTA 58.835 33.333 0.00 0.00 36.18 2.41
1737 2994 8.101419 AGACTAATAAGTTTCACCAACCCTTAG 58.899 37.037 0.00 0.00 35.56 2.18
1827 3084 5.702209 GGGGTCAATTAAGTTAGAACACGAA 59.298 40.000 0.00 0.00 0.00 3.85
1919 3176 7.655732 GTCCAAGCTTAAACAATTTAACATGGT 59.344 33.333 0.00 0.00 32.83 3.55
2006 3263 2.837498 TCATGCAGATATTCCACCACG 58.163 47.619 0.00 0.00 0.00 4.94
2018 3275 8.190122 GTGTACATAAATTTTCCATCATGCAGA 58.810 33.333 0.00 0.00 0.00 4.26
2068 3325 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2069 3326 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2070 3327 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2071 3328 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2072 3329 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2073 3330 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
2074 3331 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2075 3332 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
2076 3333 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2077 3334 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
2085 3342 9.392259 TCGTATCTAGACAAATCTAAGACAAGA 57.608 33.333 0.00 0.00 36.98 3.02
2086 3343 9.440784 GTCGTATCTAGACAAATCTAAGACAAG 57.559 37.037 0.00 0.00 36.98 3.16
2087 3344 8.953313 TGTCGTATCTAGACAAATCTAAGACAA 58.047 33.333 12.29 1.68 44.56 3.18
2088 3345 8.502105 TGTCGTATCTAGACAAATCTAAGACA 57.498 34.615 11.23 11.23 44.56 3.41
2099 3356 8.502105 TGTCTTAGATTTGTCGTATCTAGACA 57.498 34.615 0.00 14.25 45.68 3.41
2100 3357 9.440784 CTTGTCTTAGATTTGTCGTATCTAGAC 57.559 37.037 0.00 0.00 36.32 2.59
2101 3358 9.392259 TCTTGTCTTAGATTTGTCGTATCTAGA 57.608 33.333 0.00 0.00 36.32 2.43
2104 3361 9.877178 AATTCTTGTCTTAGATTTGTCGTATCT 57.123 29.630 0.00 0.00 36.39 1.98
2108 3365 8.076178 CCAAAATTCTTGTCTTAGATTTGTCGT 58.924 33.333 0.00 0.00 28.79 4.34
2109 3366 7.538678 CCCAAAATTCTTGTCTTAGATTTGTCG 59.461 37.037 0.00 0.00 28.79 4.35
2110 3367 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
2111 3368 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
2112 3369 8.359642 TGTCCCAAAATTCTTGTCTTAGATTTG 58.640 33.333 0.00 0.00 29.84 2.32
2113 3370 8.477419 TGTCCCAAAATTCTTGTCTTAGATTT 57.523 30.769 0.00 0.00 0.00 2.17
2114 3371 7.944554 TCTGTCCCAAAATTCTTGTCTTAGATT 59.055 33.333 0.00 0.00 0.00 2.40
2115 3372 7.461749 TCTGTCCCAAAATTCTTGTCTTAGAT 58.538 34.615 0.00 0.00 0.00 1.98
2116 3373 6.837312 TCTGTCCCAAAATTCTTGTCTTAGA 58.163 36.000 0.00 0.00 0.00 2.10
2117 3374 6.150140 CCTCTGTCCCAAAATTCTTGTCTTAG 59.850 42.308 0.00 0.00 0.00 2.18
2118 3375 6.003950 CCTCTGTCCCAAAATTCTTGTCTTA 58.996 40.000 0.00 0.00 0.00 2.10
2119 3376 4.829492 CCTCTGTCCCAAAATTCTTGTCTT 59.171 41.667 0.00 0.00 0.00 3.01
2120 3377 4.104738 TCCTCTGTCCCAAAATTCTTGTCT 59.895 41.667 0.00 0.00 0.00 3.41
2121 3378 4.398319 TCCTCTGTCCCAAAATTCTTGTC 58.602 43.478 0.00 0.00 0.00 3.18
2122 3379 4.141158 ACTCCTCTGTCCCAAAATTCTTGT 60.141 41.667 0.00 0.00 0.00 3.16
2123 3380 4.401925 ACTCCTCTGTCCCAAAATTCTTG 58.598 43.478 0.00 0.00 0.00 3.02
2124 3381 4.731313 ACTCCTCTGTCCCAAAATTCTT 57.269 40.909 0.00 0.00 0.00 2.52
2125 3382 7.348274 TCATATACTCCTCTGTCCCAAAATTCT 59.652 37.037 0.00 0.00 0.00 2.40
2126 3383 7.509546 TCATATACTCCTCTGTCCCAAAATTC 58.490 38.462 0.00 0.00 0.00 2.17
2127 3384 7.451731 TCATATACTCCTCTGTCCCAAAATT 57.548 36.000 0.00 0.00 0.00 1.82
2128 3385 7.293299 TCATCATATACTCCTCTGTCCCAAAAT 59.707 37.037 0.00 0.00 0.00 1.82
2129 3386 6.615316 TCATCATATACTCCTCTGTCCCAAAA 59.385 38.462 0.00 0.00 0.00 2.44
2130 3387 6.143206 TCATCATATACTCCTCTGTCCCAAA 58.857 40.000 0.00 0.00 0.00 3.28
2131 3388 5.715921 TCATCATATACTCCTCTGTCCCAA 58.284 41.667 0.00 0.00 0.00 4.12
2132 3389 5.328565 CTCATCATATACTCCTCTGTCCCA 58.671 45.833 0.00 0.00 0.00 4.37
2133 3390 4.709397 CCTCATCATATACTCCTCTGTCCC 59.291 50.000 0.00 0.00 0.00 4.46
2134 3391 4.709397 CCCTCATCATATACTCCTCTGTCC 59.291 50.000 0.00 0.00 0.00 4.02
2135 3392 5.575157 TCCCTCATCATATACTCCTCTGTC 58.425 45.833 0.00 0.00 0.00 3.51
2136 3393 5.314573 TCTCCCTCATCATATACTCCTCTGT 59.685 44.000 0.00 0.00 0.00 3.41
2137 3394 5.825532 TCTCCCTCATCATATACTCCTCTG 58.174 45.833 0.00 0.00 0.00 3.35
2138 3395 6.672946 ATCTCCCTCATCATATACTCCTCT 57.327 41.667 0.00 0.00 0.00 3.69
2139 3396 7.732222 AAATCTCCCTCATCATATACTCCTC 57.268 40.000 0.00 0.00 0.00 3.71
2140 3397 9.796242 ATAAAATCTCCCTCATCATATACTCCT 57.204 33.333 0.00 0.00 0.00 3.69
2239 3497 3.684305 TCACATGCTTACCACAAGATTCG 59.316 43.478 0.00 0.00 0.00 3.34
2377 3635 5.796502 TTATGTCTTCCCCTGGAAAGAAT 57.203 39.130 11.52 10.17 41.54 2.40
2410 3668 1.044611 GGTGGAGGAGAGGAGCATAC 58.955 60.000 0.00 0.00 0.00 2.39
2747 4005 0.915364 GGGCTCTCCACATCTCCTTT 59.085 55.000 0.00 0.00 35.00 3.11
2797 4055 4.201335 CGACGACAATTACACGTGTAAGAC 60.201 45.833 36.07 25.01 42.94 3.01
2931 4189 5.627499 ATGCACTGTCGATGTGTTTTTAT 57.373 34.783 18.29 7.15 37.70 1.40
2957 4215 7.379529 CGCAAACAAAATTTGAGTTCTATGAGT 59.620 33.333 13.19 0.00 0.00 3.41
2998 4256 6.709397 TCTGATGATTCATGAATGGCTAAGAC 59.291 38.462 25.37 8.86 0.00 3.01
3000 4258 6.711194 ACTCTGATGATTCATGAATGGCTAAG 59.289 38.462 25.37 15.89 0.00 2.18
3020 5214 9.926158 AGAAGATATTATTAGCACATGACTCTG 57.074 33.333 0.00 0.00 0.00 3.35
3183 5407 8.413899 TGCAAAAAGGTAAAAACACTTACATC 57.586 30.769 0.00 0.00 34.10 3.06
3199 5423 2.861935 CACTGCTGTTCTTGCAAAAAGG 59.138 45.455 0.00 0.00 40.13 3.11
3535 5761 5.172205 TGCGTTATAGCACAACATACAGAA 58.828 37.500 0.00 0.00 42.92 3.02
3751 6010 2.334307 CCACTTGGCTGGTGTTGAG 58.666 57.895 8.91 0.00 33.31 3.02
3778 6037 5.730550 TGTAGATTTAGCCGTGACAAGATT 58.269 37.500 0.00 0.00 0.00 2.40
3789 6048 3.648545 ACCCTCTCCATGTAGATTTAGCC 59.351 47.826 0.00 0.00 0.00 3.93
3802 6061 2.550277 TCAGAATAGCACCCTCTCCA 57.450 50.000 0.00 0.00 0.00 3.86
3942 6201 3.600388 CAGTAACCAAGTCAGGATCACC 58.400 50.000 0.00 0.00 0.00 4.02
3943 6202 3.003480 GCAGTAACCAAGTCAGGATCAC 58.997 50.000 0.00 0.00 0.00 3.06
4046 6305 1.679898 GTGCTTACCCACAGCCTCT 59.320 57.895 0.00 0.00 36.33 3.69
4050 6309 0.108138 AGATCGTGCTTACCCACAGC 60.108 55.000 0.00 0.00 35.47 4.40
4052 6311 1.262417 TCAGATCGTGCTTACCCACA 58.738 50.000 0.00 0.00 35.47 4.17
4092 6351 0.749818 GGGCCTAGAGGAGCTTTTGC 60.750 60.000 0.84 0.00 39.97 3.68
4094 6353 2.120312 GTAGGGCCTAGAGGAGCTTTT 58.880 52.381 15.05 0.00 37.39 2.27
4106 6365 3.459063 GCTTCGACGGTAGGGCCT 61.459 66.667 12.58 12.58 34.25 5.19
4351 6610 7.504924 TTGTCGAAAAGGAGTTATCACAAAT 57.495 32.000 0.00 0.00 0.00 2.32
4366 6625 8.378172 ACAGAAAGATAGTTGATTGTCGAAAA 57.622 30.769 0.00 0.00 0.00 2.29
4370 6629 7.796838 TCAAACAGAAAGATAGTTGATTGTCG 58.203 34.615 0.00 0.00 0.00 4.35
4412 6674 7.131907 TCAAAACTCGGGATTCATCCTTATA 57.868 36.000 5.80 0.00 46.35 0.98
4414 6676 5.429681 TCAAAACTCGGGATTCATCCTTA 57.570 39.130 5.80 0.00 46.35 2.69
4417 6679 4.455606 AGATCAAAACTCGGGATTCATCC 58.544 43.478 0.00 0.00 46.41 3.51
4418 6680 6.442513 AAAGATCAAAACTCGGGATTCATC 57.557 37.500 0.00 0.00 0.00 2.92
4421 6683 4.859245 GCAAAAGATCAAAACTCGGGATTC 59.141 41.667 0.00 0.00 0.00 2.52
4428 6690 5.409520 GGGAAATGGCAAAAGATCAAAACTC 59.590 40.000 0.00 0.00 0.00 3.01
4442 6704 3.513515 GTCAAACAATAGGGGAAATGGCA 59.486 43.478 0.00 0.00 0.00 4.92
4443 6705 3.513515 TGTCAAACAATAGGGGAAATGGC 59.486 43.478 0.00 0.00 0.00 4.40
4452 6714 6.560253 ACTAGTTGCTTGTCAAACAATAGG 57.440 37.500 4.78 1.86 37.48 2.57
4458 6720 7.798982 GTCAATTCTACTAGTTGCTTGTCAAAC 59.201 37.037 0.00 0.00 36.26 2.93
4460 6722 7.217200 AGTCAATTCTACTAGTTGCTTGTCAA 58.783 34.615 0.00 0.00 0.00 3.18
4463 6725 8.314751 ACATAGTCAATTCTACTAGTTGCTTGT 58.685 33.333 0.00 1.09 33.15 3.16
4464 6726 8.709386 ACATAGTCAATTCTACTAGTTGCTTG 57.291 34.615 0.00 6.88 33.15 4.01
4472 6734 8.740906 GCAGGCTATACATAGTCAATTCTACTA 58.259 37.037 3.82 0.79 37.45 1.82
4475 6737 7.539034 TGCAGGCTATACATAGTCAATTCTA 57.461 36.000 3.82 0.00 37.45 2.10
4477 6739 6.875726 TCATGCAGGCTATACATAGTCAATTC 59.124 38.462 3.82 0.00 37.45 2.17
4478 6740 6.772605 TCATGCAGGCTATACATAGTCAATT 58.227 36.000 3.82 0.00 37.45 2.32
4479 6741 6.364568 TCATGCAGGCTATACATAGTCAAT 57.635 37.500 3.82 0.00 37.45 2.57
4480 6742 5.806654 TCATGCAGGCTATACATAGTCAA 57.193 39.130 3.82 0.00 37.45 3.18
4481 6743 5.718607 AGATCATGCAGGCTATACATAGTCA 59.281 40.000 3.82 0.00 37.45 3.41
4482 6744 6.041511 CAGATCATGCAGGCTATACATAGTC 58.958 44.000 0.00 0.00 35.26 2.59
4483 6745 5.718607 TCAGATCATGCAGGCTATACATAGT 59.281 40.000 0.00 0.00 32.96 2.12
4484 6746 6.218108 TCAGATCATGCAGGCTATACATAG 57.782 41.667 0.00 0.00 0.00 2.23
4488 6751 9.258826 CTAATATTCAGATCATGCAGGCTATAC 57.741 37.037 0.00 0.00 0.00 1.47
4499 6762 9.209175 GTAAAACGCCTCTAATATTCAGATCAT 57.791 33.333 0.00 0.00 0.00 2.45
4505 6768 7.551262 ACATGTGTAAAACGCCTCTAATATTCA 59.449 33.333 0.00 0.00 0.00 2.57
4507 6770 7.551262 TCACATGTGTAAAACGCCTCTAATATT 59.449 33.333 24.63 0.00 0.00 1.28
4508 6771 7.011109 GTCACATGTGTAAAACGCCTCTAATAT 59.989 37.037 24.63 0.00 0.00 1.28
4512 6775 3.991773 GTCACATGTGTAAAACGCCTCTA 59.008 43.478 24.63 0.00 0.00 2.43
4532 6795 7.544622 TGATACTAACACAGGAGTAACATGTC 58.455 38.462 0.00 0.00 41.71 3.06
4539 6802 7.285629 CCTTGATCTGATACTAACACAGGAGTA 59.714 40.741 0.00 0.00 32.86 2.59
4556 6819 7.148507 GGATGATTTAAGATACGCCTTGATCTG 60.149 40.741 0.00 0.00 32.66 2.90
4566 6829 7.841956 ACTATCCCAGGATGATTTAAGATACG 58.158 38.462 9.54 0.00 39.69 3.06
4569 6832 9.398921 AGTAACTATCCCAGGATGATTTAAGAT 57.601 33.333 9.54 0.00 39.69 2.40
4578 6841 4.130118 GTTGCAGTAACTATCCCAGGATG 58.870 47.826 9.54 2.51 36.34 3.51
4586 6849 5.105752 CAGAGACTGGTTGCAGTAACTATC 58.894 45.833 1.05 0.00 39.31 2.08
4590 6853 2.417719 CCAGAGACTGGTTGCAGTAAC 58.582 52.381 9.36 0.00 45.82 2.50
4610 6873 5.772521 ACACTTCTTTGTACATTCATTGCC 58.227 37.500 0.00 0.00 0.00 4.52
4630 6893 4.868314 ACAGAGGGAGTACAACTTACAC 57.132 45.455 0.00 0.00 0.00 2.90
4640 6903 4.607239 AGTAATTCCGAACAGAGGGAGTA 58.393 43.478 0.00 0.00 33.01 2.59
4644 6907 2.165845 ACGAGTAATTCCGAACAGAGGG 59.834 50.000 0.00 0.00 0.00 4.30
4645 6908 3.436496 GACGAGTAATTCCGAACAGAGG 58.564 50.000 0.00 0.00 0.00 3.69
4646 6909 3.099362 CGACGAGTAATTCCGAACAGAG 58.901 50.000 0.00 0.00 0.00 3.35
4647 6910 2.743664 TCGACGAGTAATTCCGAACAGA 59.256 45.455 0.00 0.00 0.00 3.41
4648 6911 3.127081 TCGACGAGTAATTCCGAACAG 57.873 47.619 0.00 0.00 0.00 3.16
4649 6912 3.058016 ACTTCGACGAGTAATTCCGAACA 60.058 43.478 0.00 0.00 35.71 3.18
4650 6913 3.496155 ACTTCGACGAGTAATTCCGAAC 58.504 45.455 0.00 0.00 35.71 3.95
4651 6914 3.837213 ACTTCGACGAGTAATTCCGAA 57.163 42.857 0.00 0.00 37.61 4.30
4652 6915 3.837213 AACTTCGACGAGTAATTCCGA 57.163 42.857 0.00 0.00 0.00 4.55
4653 6916 4.656041 AGTAACTTCGACGAGTAATTCCG 58.344 43.478 0.00 0.00 0.00 4.30
4654 6917 4.727655 CGAGTAACTTCGACGAGTAATTCC 59.272 45.833 0.00 0.00 43.03 3.01
4655 6918 5.319931 ACGAGTAACTTCGACGAGTAATTC 58.680 41.667 0.00 0.00 43.03 2.17
4656 6919 5.288543 ACGAGTAACTTCGACGAGTAATT 57.711 39.130 0.00 0.00 43.03 1.40
4657 6920 4.891516 GACGAGTAACTTCGACGAGTAAT 58.108 43.478 0.00 0.00 43.03 1.89
4658 6921 4.313522 GACGAGTAACTTCGACGAGTAA 57.686 45.455 0.00 0.00 43.03 2.24
4659 6922 3.980238 GACGAGTAACTTCGACGAGTA 57.020 47.619 0.00 0.00 43.03 2.59
4660 6923 2.871263 GACGAGTAACTTCGACGAGT 57.129 50.000 0.00 0.00 43.03 4.18
4664 6927 3.446184 TCTTCGACGAGTAACTTCGAC 57.554 47.619 0.00 0.00 45.99 4.20
4665 6928 4.472691 TTTCTTCGACGAGTAACTTCGA 57.527 40.909 0.00 1.09 45.01 3.71
4666 6929 4.849926 TCATTTCTTCGACGAGTAACTTCG 59.150 41.667 0.00 0.00 45.70 3.79
4667 6930 6.686130 TTCATTTCTTCGACGAGTAACTTC 57.314 37.500 0.00 0.00 0.00 3.01
4668 6931 6.645415 ACATTCATTTCTTCGACGAGTAACTT 59.355 34.615 0.00 0.00 0.00 2.66
4669 6932 6.157211 ACATTCATTTCTTCGACGAGTAACT 58.843 36.000 0.00 0.00 0.00 2.24
4670 6933 6.390987 ACATTCATTTCTTCGACGAGTAAC 57.609 37.500 0.00 0.00 0.00 2.50
4671 6934 8.188799 AGATACATTCATTTCTTCGACGAGTAA 58.811 33.333 0.00 0.00 0.00 2.24
4672 6935 7.704271 AGATACATTCATTTCTTCGACGAGTA 58.296 34.615 0.00 0.00 0.00 2.59
4673 6936 6.565234 AGATACATTCATTTCTTCGACGAGT 58.435 36.000 0.00 0.00 0.00 4.18
4674 6937 8.070769 TCTAGATACATTCATTTCTTCGACGAG 58.929 37.037 0.00 0.00 0.00 4.18
4675 6938 7.927048 TCTAGATACATTCATTTCTTCGACGA 58.073 34.615 0.00 0.00 0.00 4.20
4676 6939 8.634265 CATCTAGATACATTCATTTCTTCGACG 58.366 37.037 4.54 0.00 0.00 5.12
4677 6940 9.469807 ACATCTAGATACATTCATTTCTTCGAC 57.530 33.333 4.54 0.00 0.00 4.20
4708 6971 9.952030 TCACAAAAATGGATGTATCTACAACTA 57.048 29.630 0.00 0.00 39.99 2.24
4709 6972 8.730680 GTCACAAAAATGGATGTATCTACAACT 58.269 33.333 0.00 0.00 39.99 3.16
4710 6973 8.511321 TGTCACAAAAATGGATGTATCTACAAC 58.489 33.333 0.00 0.00 39.99 3.32
4711 6974 8.628630 TGTCACAAAAATGGATGTATCTACAA 57.371 30.769 0.00 0.00 39.99 2.41
4712 6975 8.628630 TTGTCACAAAAATGGATGTATCTACA 57.371 30.769 0.00 0.00 40.98 2.74
4713 6976 8.730680 ACTTGTCACAAAAATGGATGTATCTAC 58.269 33.333 0.00 0.00 0.00 2.59
4714 6977 8.862325 ACTTGTCACAAAAATGGATGTATCTA 57.138 30.769 0.00 0.00 0.00 1.98
4715 6978 7.765695 ACTTGTCACAAAAATGGATGTATCT 57.234 32.000 0.00 0.00 0.00 1.98
4718 6981 9.906660 GAATTACTTGTCACAAAAATGGATGTA 57.093 29.630 0.00 0.00 0.00 2.29
4719 6982 7.872483 GGAATTACTTGTCACAAAAATGGATGT 59.128 33.333 0.00 0.00 0.00 3.06
4720 6983 7.871973 TGGAATTACTTGTCACAAAAATGGATG 59.128 33.333 0.00 0.00 0.00 3.51
4721 6984 7.961351 TGGAATTACTTGTCACAAAAATGGAT 58.039 30.769 0.00 0.00 0.00 3.41
4722 6985 7.353414 TGGAATTACTTGTCACAAAAATGGA 57.647 32.000 0.00 0.00 0.00 3.41
4723 6986 8.334632 GTTTGGAATTACTTGTCACAAAAATGG 58.665 33.333 0.00 0.00 0.00 3.16
4724 6987 8.055402 CGTTTGGAATTACTTGTCACAAAAATG 58.945 33.333 0.00 0.00 0.00 2.32
4725 6988 7.223777 CCGTTTGGAATTACTTGTCACAAAAAT 59.776 33.333 0.00 0.00 37.49 1.82
4726 6989 6.531948 CCGTTTGGAATTACTTGTCACAAAAA 59.468 34.615 0.00 0.00 37.49 1.94
4727 6990 6.037098 CCGTTTGGAATTACTTGTCACAAAA 58.963 36.000 0.00 0.00 37.49 2.44
4728 6991 5.357314 TCCGTTTGGAATTACTTGTCACAAA 59.643 36.000 0.00 0.00 42.85 2.83
4729 6992 4.882427 TCCGTTTGGAATTACTTGTCACAA 59.118 37.500 0.00 0.00 42.85 3.33
4730 6993 4.452825 TCCGTTTGGAATTACTTGTCACA 58.547 39.130 0.00 0.00 42.85 3.58
4731 6994 4.083484 CCTCCGTTTGGAATTACTTGTCAC 60.083 45.833 0.00 0.00 45.87 3.67
4732 6995 4.069304 CCTCCGTTTGGAATTACTTGTCA 58.931 43.478 0.00 0.00 45.87 3.58
4733 6996 3.439129 CCCTCCGTTTGGAATTACTTGTC 59.561 47.826 0.00 0.00 45.87 3.18
4734 6997 3.073356 TCCCTCCGTTTGGAATTACTTGT 59.927 43.478 0.00 0.00 45.87 3.16
4735 6998 3.681593 TCCCTCCGTTTGGAATTACTTG 58.318 45.455 0.00 0.00 45.87 3.16
4736 6999 3.329814 ACTCCCTCCGTTTGGAATTACTT 59.670 43.478 0.00 0.00 45.87 2.24
4737 7000 2.910977 ACTCCCTCCGTTTGGAATTACT 59.089 45.455 0.00 0.00 45.87 2.24
4738 7001 3.345508 ACTCCCTCCGTTTGGAATTAC 57.654 47.619 0.00 0.00 45.87 1.89
4739 7002 4.098894 AGTACTCCCTCCGTTTGGAATTA 58.901 43.478 0.00 0.00 45.87 1.40
4740 7003 2.910977 AGTACTCCCTCCGTTTGGAATT 59.089 45.455 0.00 0.00 45.87 2.17
4741 7004 2.547990 AGTACTCCCTCCGTTTGGAAT 58.452 47.619 0.00 0.00 45.87 3.01
4742 7005 2.019807 AGTACTCCCTCCGTTTGGAA 57.980 50.000 0.00 0.00 45.87 3.53
4743 7006 2.905415 TAGTACTCCCTCCGTTTGGA 57.095 50.000 0.00 0.00 43.88 3.53
4744 7007 3.967332 TTTAGTACTCCCTCCGTTTGG 57.033 47.619 0.00 0.00 0.00 3.28
4745 7008 6.218108 AGTATTTAGTACTCCCTCCGTTTG 57.782 41.667 0.00 0.00 39.46 2.93
4746 7009 7.961326 TTAGTATTTAGTACTCCCTCCGTTT 57.039 36.000 0.00 0.00 42.63 3.60
4747 7010 7.232330 GGATTAGTATTTAGTACTCCCTCCGTT 59.768 40.741 0.00 0.00 42.63 4.44
4748 7011 6.718912 GGATTAGTATTTAGTACTCCCTCCGT 59.281 42.308 0.00 0.00 42.63 4.69
4749 7012 6.947158 AGGATTAGTATTTAGTACTCCCTCCG 59.053 42.308 0.00 0.00 42.63 4.63
4750 7013 7.729431 ACAGGATTAGTATTTAGTACTCCCTCC 59.271 40.741 0.00 0.00 42.63 4.30
4751 7014 8.709272 ACAGGATTAGTATTTAGTACTCCCTC 57.291 38.462 0.00 0.00 42.63 4.30
4752 7015 8.925338 CAACAGGATTAGTATTTAGTACTCCCT 58.075 37.037 0.00 0.00 42.63 4.20
4753 7016 8.702819 ACAACAGGATTAGTATTTAGTACTCCC 58.297 37.037 0.00 0.00 42.63 4.30
4754 7017 9.530633 CACAACAGGATTAGTATTTAGTACTCC 57.469 37.037 0.00 0.00 42.63 3.85
4757 7020 9.865321 TGACACAACAGGATTAGTATTTAGTAC 57.135 33.333 0.00 0.00 0.00 2.73
4764 7027 9.712305 GCTAATATGACACAACAGGATTAGTAT 57.288 33.333 0.00 0.00 35.02 2.12
4777 7040 4.439057 GAAGAACCGGCTAATATGACACA 58.561 43.478 0.00 0.00 0.00 3.72
4792 7055 2.396590 TGCAGATTACCCGAAGAACC 57.603 50.000 0.00 0.00 0.00 3.62
4808 7075 2.333926 CCGTTCTGTTACGAGATTGCA 58.666 47.619 0.00 0.00 43.99 4.08
4822 7089 2.257353 GGCTCAACAATGCCGTTCT 58.743 52.632 0.00 0.00 39.71 3.01
4867 7211 7.004555 TGTCAACTCTTTCTTATCTTGCCTA 57.995 36.000 0.00 0.00 0.00 3.93
4882 7267 1.280421 GGGCCTGAAGATGTCAACTCT 59.720 52.381 0.84 0.00 35.22 3.24
4899 7284 3.543680 TTAGAGTTCTGTGCTATGGGC 57.456 47.619 0.00 0.00 42.22 5.36
4926 7311 9.890352 GGAAAGAAATTATGCATAGAGCTTTAG 57.110 33.333 17.93 0.00 45.94 1.85
4927 7312 9.407380 TGGAAAGAAATTATGCATAGAGCTTTA 57.593 29.630 17.93 0.00 45.94 1.85
4945 7335 0.881118 GCCTGCGATTGTGGAAAGAA 59.119 50.000 0.00 0.00 0.00 2.52
4951 7341 3.814842 TCTATTTATGCCTGCGATTGTGG 59.185 43.478 0.00 0.00 0.00 4.17
4975 7368 6.364706 TGGTGCTGCGTTTTTATTTTATTCTG 59.635 34.615 0.00 0.00 0.00 3.02
5091 7484 0.525668 CGTTCGTTCCCATCTCTCCG 60.526 60.000 0.00 0.00 0.00 4.63
5104 7497 2.562298 TGGTAATTAGGGTGTCGTTCGT 59.438 45.455 0.00 0.00 0.00 3.85
5105 7498 3.184541 CTGGTAATTAGGGTGTCGTTCG 58.815 50.000 0.00 0.00 0.00 3.95
5106 7499 2.934553 GCTGGTAATTAGGGTGTCGTTC 59.065 50.000 0.00 0.00 0.00 3.95
5107 7500 2.303600 TGCTGGTAATTAGGGTGTCGTT 59.696 45.455 0.00 0.00 0.00 3.85
5113 7506 4.721776 TCATCTTCTGCTGGTAATTAGGGT 59.278 41.667 0.00 0.00 0.00 4.34
5121 7514 3.640498 CAGAGGATCATCTTCTGCTGGTA 59.360 47.826 13.46 0.00 42.36 3.25
5200 7593 3.118482 TCTCGTCGTGTATTAGGACCTCT 60.118 47.826 0.00 0.00 40.26 3.69
5201 7599 3.201290 TCTCGTCGTGTATTAGGACCTC 58.799 50.000 0.00 0.00 40.26 3.85
5203 7601 3.201290 TCTCTCGTCGTGTATTAGGACC 58.799 50.000 0.00 0.00 40.26 4.46
5204 7602 3.303263 GCTCTCTCGTCGTGTATTAGGAC 60.303 52.174 0.00 0.00 40.04 3.85
5268 7666 4.554036 CTAGGGCCGGCCTTGCTC 62.554 72.222 42.70 26.86 36.10 4.26
5271 7669 4.176752 GTCCTAGGGCCGGCCTTG 62.177 72.222 42.70 30.21 36.10 3.61
5273 7671 3.436028 TAGTCCTAGGGCCGGCCT 61.436 66.667 42.70 30.10 36.10 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.