Multiple sequence alignment - TraesCS6B01G325400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G325400 chr6B 100.000 4520 0 0 1 4520 574714035 574718554 0.000000e+00 8347.0
1 TraesCS6B01G325400 chr6B 82.530 166 22 3 3891 4049 12519860 12520025 6.100000e-29 139.0
2 TraesCS6B01G325400 chr6D 91.037 2421 113 51 83 2459 384437939 384440299 0.000000e+00 3173.0
3 TraesCS6B01G325400 chr6D 93.021 1261 40 19 2515 3752 384440309 384441544 0.000000e+00 1797.0
4 TraesCS6B01G325400 chr6A 95.284 1336 38 14 987 2315 529018790 529020107 0.000000e+00 2095.0
5 TraesCS6B01G325400 chr6A 91.997 1212 54 24 2724 3901 529021333 529022535 0.000000e+00 1661.0
6 TraesCS6B01G325400 chr6A 82.886 894 87 23 27 882 529017869 529018734 0.000000e+00 743.0
7 TraesCS6B01G325400 chr6A 92.252 413 16 7 2312 2714 529020640 529021046 5.070000e-159 571.0
8 TraesCS6B01G325400 chr6A 93.970 199 5 3 2312 2507 529020399 529020593 1.230000e-75 294.0
9 TraesCS6B01G325400 chr7D 83.480 684 77 22 1030 1694 164874797 164874131 5.000000e-169 604.0
10 TraesCS6B01G325400 chr7D 89.157 332 34 2 3167 3497 164871581 164871251 3.250000e-111 412.0
11 TraesCS6B01G325400 chr7D 92.692 260 19 0 1773 2032 164873852 164873593 4.270000e-100 375.0
12 TraesCS6B01G325400 chr7D 80.982 163 22 5 3894 4049 453287224 453287384 2.210000e-23 121.0
13 TraesCS6B01G325400 chr7D 94.872 39 2 0 4072 4110 454669988 454669950 1.360000e-05 62.1
14 TraesCS6B01G325400 chr7B 83.138 682 79 27 1030 1694 128308742 128308080 1.400000e-164 590.0
15 TraesCS6B01G325400 chr7B 87.651 332 39 2 3167 3497 128305256 128304926 7.090000e-103 385.0
16 TraesCS6B01G325400 chr7B 92.308 260 20 0 1773 2032 128307923 128307664 1.990000e-98 370.0
17 TraesCS6B01G325400 chr7B 82.822 163 22 2 3893 4049 7333881 7333719 1.700000e-29 141.0
18 TraesCS6B01G325400 chr7B 85.714 56 6 2 4054 4108 719096430 719096376 1.760000e-04 58.4
19 TraesCS6B01G325400 chr7A 90.338 414 40 0 1281 1694 166752021 166751608 1.110000e-150 544.0
20 TraesCS6B01G325400 chr7A 92.830 265 19 0 1769 2033 166751385 166751121 7.090000e-103 385.0
21 TraesCS6B01G325400 chr7A 84.795 171 23 3 1030 1197 166752189 166752019 7.780000e-38 169.0
22 TraesCS6B01G325400 chr7A 72.250 400 96 12 1297 1687 457867078 457866685 4.780000e-20 110.0
23 TraesCS6B01G325400 chr2A 86.228 167 14 5 3890 4049 310733887 310733723 6.010000e-39 172.0
24 TraesCS6B01G325400 chr3D 85.093 161 17 3 3895 4049 114674494 114674335 1.680000e-34 158.0
25 TraesCS6B01G325400 chr1D 72.401 558 116 31 1100 1633 56530713 56530170 4.710000e-30 143.0
26 TraesCS6B01G325400 chr1D 76.168 214 47 4 1279 1490 445588735 445588946 4.780000e-20 110.0
27 TraesCS6B01G325400 chr2D 82.099 162 23 2 3894 4049 14985364 14985203 2.840000e-27 134.0
28 TraesCS6B01G325400 chr3A 81.761 159 23 2 3897 4049 41079872 41079714 1.320000e-25 128.0
29 TraesCS6B01G325400 chr3A 100.000 32 0 0 1865 1896 127089663 127089632 4.880000e-05 60.2
30 TraesCS6B01G325400 chr5A 80.982 163 25 2 3893 4049 450557201 450557363 1.710000e-24 124.0
31 TraesCS6B01G325400 chr4A 80.723 166 25 3 3890 4049 146399105 146398941 6.140000e-24 122.0
32 TraesCS6B01G325400 chr4A 88.136 59 7 0 4050 4108 732815997 732816055 2.260000e-08 71.3
33 TraesCS6B01G325400 chr4A 92.857 42 3 0 4067 4108 731955438 731955397 1.360000e-05 62.1
34 TraesCS6B01G325400 chr1A 72.912 443 83 30 1067 1490 541770413 541770837 7.940000e-23 119.0
35 TraesCS6B01G325400 chr2B 88.136 59 4 3 4050 4107 68224494 68224438 2.920000e-07 67.6
36 TraesCS6B01G325400 chr5D 97.143 35 1 0 4067 4101 493067846 493067880 4.880000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G325400 chr6B 574714035 574718554 4519 False 8347.000000 8347 100.0000 1 4520 1 chr6B.!!$F2 4519
1 TraesCS6B01G325400 chr6D 384437939 384441544 3605 False 2485.000000 3173 92.0290 83 3752 2 chr6D.!!$F1 3669
2 TraesCS6B01G325400 chr6A 529017869 529022535 4666 False 1072.800000 2095 91.2778 27 3901 5 chr6A.!!$F1 3874
3 TraesCS6B01G325400 chr7D 164871251 164874797 3546 True 463.666667 604 88.4430 1030 3497 3 chr7D.!!$R2 2467
4 TraesCS6B01G325400 chr7B 128304926 128308742 3816 True 448.333333 590 87.6990 1030 3497 3 chr7B.!!$R3 2467
5 TraesCS6B01G325400 chr7A 166751121 166752189 1068 True 366.000000 544 89.3210 1030 2033 3 chr7A.!!$R2 1003

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
725 780 0.038526 GTCACTCCATCGGTTCACGT 60.039 55.0 0.0 0.0 44.69 4.49 F
861 919 0.188587 ACACCTCACTCACCTCCTCA 59.811 55.0 0.0 0.0 0.00 3.86 F
897 955 0.250038 AGCATTGATCCATCGGACGG 60.250 55.0 0.0 0.0 32.98 4.79 F
2721 4468 0.032813 CCCCATGTTCTTCCTGCCAT 60.033 55.0 0.0 0.0 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2401 3561 0.031314 ATCAGTAGCATCTGCCGTCG 59.969 55.0 0.0 0.0 43.38 5.12 R
2642 4389 0.392595 GACCCGTGAGCCCCTAAAAG 60.393 60.0 0.0 0.0 0.00 2.27 R
2807 4845 1.893315 TCCCCATTAGAACCTCCTGG 58.107 55.0 0.0 0.0 39.83 4.45 R
4241 6594 0.033504 GCGGGATAAGCGATGAAGGA 59.966 55.0 0.0 0.0 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.500603 GCTTGGTAACTATAGCTAGCGA 57.499 45.455 9.55 4.05 44.22 4.93
23 24 4.868067 GCTTGGTAACTATAGCTAGCGAA 58.132 43.478 9.55 1.68 44.22 4.70
24 25 4.680567 GCTTGGTAACTATAGCTAGCGAAC 59.319 45.833 9.55 0.00 44.22 3.95
25 26 5.507650 GCTTGGTAACTATAGCTAGCGAACT 60.508 44.000 9.55 0.00 44.22 3.01
34 35 5.786401 ATAGCTAGCGAACTTTGTTTCAG 57.214 39.130 9.55 0.00 0.00 3.02
49 50 5.979288 TGTTTCAGAGACCTACTCCTAAC 57.021 43.478 0.00 0.00 45.96 2.34
66 67 4.660168 CCTAACTAGTAGGGCTAATCGGA 58.340 47.826 0.00 0.00 45.30 4.55
67 68 4.701171 CCTAACTAGTAGGGCTAATCGGAG 59.299 50.000 0.00 0.00 45.30 4.63
68 69 2.516906 ACTAGTAGGGCTAATCGGAGC 58.483 52.381 1.45 0.00 42.05 4.70
69 70 1.469308 CTAGTAGGGCTAATCGGAGCG 59.531 57.143 0.00 0.00 43.83 5.03
228 238 2.234913 ATCTACAACACCGCCGTCCC 62.235 60.000 0.00 0.00 0.00 4.46
237 247 2.514592 CGCCGTCCCGTACTCCTA 60.515 66.667 0.00 0.00 0.00 2.94
259 269 1.348696 TGTGATGAGTGAGTGCCATGT 59.651 47.619 0.00 0.00 0.00 3.21
299 309 1.343789 ACTGATCCATCATCGCCAGAG 59.656 52.381 0.00 0.00 36.02 3.35
308 318 0.809241 CATCGCCAGAGGAGAAGTGC 60.809 60.000 0.00 0.00 34.75 4.40
344 360 5.190677 TCAAAAGGAGGACCGGAATATTTC 58.809 41.667 9.46 0.00 41.83 2.17
431 448 4.082571 CCATTTTATCCATTCGATCTGGCC 60.083 45.833 9.19 0.00 33.56 5.36
460 477 2.419667 GAGCTTAAGCCGTTGGTAACA 58.580 47.619 23.71 0.00 44.92 2.41
481 498 9.059485 GTAACAAAACTACTATACGAGTGTGAG 57.941 37.037 0.00 0.00 39.39 3.51
522 557 1.736032 CGGCCAAAACGAACAAACCAA 60.736 47.619 2.24 0.00 0.00 3.67
530 565 1.009335 GAACAAACCAACCGACGGC 60.009 57.895 15.39 0.00 0.00 5.68
531 566 1.716826 GAACAAACCAACCGACGGCA 61.717 55.000 15.39 0.00 0.00 5.69
532 567 1.995646 AACAAACCAACCGACGGCAC 61.996 55.000 15.39 0.00 0.00 5.01
604 659 1.985473 ACTGCACATTCAAGCCTTCA 58.015 45.000 0.00 0.00 0.00 3.02
725 780 0.038526 GTCACTCCATCGGTTCACGT 60.039 55.000 0.00 0.00 44.69 4.49
755 810 4.394920 CCGTCACATGCTGTATTTAACCTT 59.605 41.667 0.00 0.00 0.00 3.50
846 901 1.067495 GCTGACTCCAGTAGACACACC 60.067 57.143 0.00 0.00 42.35 4.16
847 902 2.520069 CTGACTCCAGTAGACACACCT 58.480 52.381 0.00 0.00 35.70 4.00
849 904 2.158519 TGACTCCAGTAGACACACCTCA 60.159 50.000 0.00 0.00 0.00 3.86
851 906 2.158445 ACTCCAGTAGACACACCTCACT 60.158 50.000 0.00 0.00 0.00 3.41
853 908 2.158519 TCCAGTAGACACACCTCACTCA 60.159 50.000 0.00 0.00 0.00 3.41
855 910 2.029828 CAGTAGACACACCTCACTCACC 60.030 54.545 0.00 0.00 0.00 4.02
856 911 2.158445 AGTAGACACACCTCACTCACCT 60.158 50.000 0.00 0.00 0.00 4.00
861 919 0.188587 ACACCTCACTCACCTCCTCA 59.811 55.000 0.00 0.00 0.00 3.86
862 920 0.605589 CACCTCACTCACCTCCTCAC 59.394 60.000 0.00 0.00 0.00 3.51
865 923 1.548809 CCTCACTCACCTCCTCACTCA 60.549 57.143 0.00 0.00 0.00 3.41
867 925 0.605589 CACTCACCTCCTCACTCACC 59.394 60.000 0.00 0.00 0.00 4.02
871 929 0.833834 CACCTCCTCACTCACCCAGT 60.834 60.000 0.00 0.00 34.67 4.00
874 932 0.896019 CTCCTCACTCACCCAGTCGT 60.896 60.000 0.00 0.00 30.26 4.34
882 940 1.079819 CACCCAGTCGTCGAAGCAT 60.080 57.895 0.00 0.00 0.00 3.79
883 941 0.670546 CACCCAGTCGTCGAAGCATT 60.671 55.000 0.00 0.00 0.00 3.56
888 946 1.590238 CAGTCGTCGAAGCATTGATCC 59.410 52.381 0.00 0.00 0.00 3.36
889 947 1.204704 AGTCGTCGAAGCATTGATCCA 59.795 47.619 0.00 0.00 0.00 3.41
891 949 2.219674 GTCGTCGAAGCATTGATCCATC 59.780 50.000 0.00 0.00 0.00 3.51
892 950 1.190984 CGTCGAAGCATTGATCCATCG 59.809 52.381 0.00 0.00 0.00 3.84
893 951 1.528586 GTCGAAGCATTGATCCATCGG 59.471 52.381 0.00 0.00 0.00 4.18
894 952 1.412343 TCGAAGCATTGATCCATCGGA 59.588 47.619 0.00 0.00 35.55 4.55
895 953 1.528586 CGAAGCATTGATCCATCGGAC 59.471 52.381 0.00 0.00 32.98 4.79
896 954 1.528586 GAAGCATTGATCCATCGGACG 59.471 52.381 0.00 0.00 32.98 4.79
897 955 0.250038 AGCATTGATCCATCGGACGG 60.250 55.000 0.00 0.00 32.98 4.79
898 956 0.532862 GCATTGATCCATCGGACGGT 60.533 55.000 0.00 0.00 32.98 4.83
899 957 1.220529 CATTGATCCATCGGACGGTG 58.779 55.000 0.00 0.00 32.98 4.94
900 958 0.532862 ATTGATCCATCGGACGGTGC 60.533 55.000 0.00 0.00 32.98 5.01
901 959 1.613317 TTGATCCATCGGACGGTGCT 61.613 55.000 0.00 0.00 32.98 4.40
902 960 1.592669 GATCCATCGGACGGTGCTG 60.593 63.158 0.00 0.00 32.98 4.41
903 961 3.740128 ATCCATCGGACGGTGCTGC 62.740 63.158 0.00 0.00 32.98 5.25
904 962 4.758251 CCATCGGACGGTGCTGCA 62.758 66.667 0.00 0.00 0.00 4.41
905 963 2.741985 CATCGGACGGTGCTGCAA 60.742 61.111 2.77 0.00 0.00 4.08
906 964 2.434884 ATCGGACGGTGCTGCAAG 60.435 61.111 2.77 4.18 0.00 4.01
953 1011 5.355071 CACTGCATTAGCTTAATCACTTCCA 59.645 40.000 0.00 0.00 42.74 3.53
964 1022 2.031516 CACTTCCAGTCAGCCGCAG 61.032 63.158 0.00 0.00 0.00 5.18
1223 1307 4.100653 CACTCTCCTCTTGCATTATCCTGA 59.899 45.833 0.00 0.00 0.00 3.86
1697 1796 3.573491 GCCATGGCCGTAAGTCGC 61.573 66.667 27.24 0.00 38.35 5.19
1698 1797 2.125310 CCATGGCCGTAAGTCGCA 60.125 61.111 0.00 0.00 38.35 5.10
1699 1798 1.743623 CCATGGCCGTAAGTCGCAA 60.744 57.895 0.00 0.00 38.35 4.85
1764 1874 5.048504 TGCTCTGACATGAAAGAATCAAACC 60.049 40.000 0.00 0.00 42.54 3.27
2033 2365 1.683917 CGTCCTCATCTCCAAGGTAGG 59.316 57.143 0.00 0.00 34.12 3.18
2036 2368 1.139853 CCTCATCTCCAAGGTAGGCAC 59.860 57.143 0.00 0.00 0.00 5.01
2037 2369 2.114616 CTCATCTCCAAGGTAGGCACT 58.885 52.381 0.00 0.00 46.37 4.40
2086 2544 1.326213 ACTGTCTCCTCTCCATGCGG 61.326 60.000 0.00 0.00 0.00 5.69
2107 2565 4.201851 CGGCACAACATTTCCTGAGAATAG 60.202 45.833 0.00 0.00 0.00 1.73
2161 2619 0.260230 TCTTTGGTTTCCCCACAGCA 59.740 50.000 0.00 0.00 45.19 4.41
2185 2643 3.326747 AGTTATGCGATATTCCTTCCGC 58.673 45.455 0.00 0.00 46.82 5.54
2231 2694 5.465532 AGTACAGCTACTGATGATGATGG 57.534 43.478 0.78 0.00 35.18 3.51
2298 2761 0.888285 GACTGTCTTGCCTGCTGCTT 60.888 55.000 0.00 0.00 42.00 3.91
2299 2762 0.466922 ACTGTCTTGCCTGCTGCTTT 60.467 50.000 0.00 0.00 42.00 3.51
2485 3811 5.599999 ATGACCAGGCAGTAGTAAACTAG 57.400 43.478 0.00 0.00 35.76 2.57
2584 4331 3.895232 TGTCTGTTCTATCTTGGCCTC 57.105 47.619 3.32 0.00 0.00 4.70
2642 4389 1.966451 AGCAAACGGTAGCAGCACC 60.966 57.895 8.00 0.00 35.04 5.01
2646 4393 1.336755 CAAACGGTAGCAGCACCTTTT 59.663 47.619 10.67 10.67 39.79 2.27
2721 4468 0.032813 CCCCATGTTCTTCCTGCCAT 60.033 55.000 0.00 0.00 0.00 4.40
2739 4763 6.404734 CCTGCCATTTGAATCAAGTTACTACC 60.405 42.308 0.00 0.00 0.00 3.18
2741 4765 6.150976 TGCCATTTGAATCAAGTTACTACCAG 59.849 38.462 0.00 0.00 0.00 4.00
2743 4767 6.375455 CCATTTGAATCAAGTTACTACCAGCT 59.625 38.462 0.00 0.00 0.00 4.24
2744 4768 7.552687 CCATTTGAATCAAGTTACTACCAGCTA 59.447 37.037 0.00 0.00 0.00 3.32
2745 4769 8.607459 CATTTGAATCAAGTTACTACCAGCTAG 58.393 37.037 0.00 0.00 0.00 3.42
2929 5090 2.197465 GATCCAGTACTCCCCAGGTTT 58.803 52.381 0.00 0.00 0.00 3.27
2932 5093 1.423921 CCAGTACTCCCCAGGTTTGTT 59.576 52.381 0.00 0.00 0.00 2.83
2954 5115 2.999355 GCACCAAACACAGCAAGAAAAA 59.001 40.909 0.00 0.00 0.00 1.94
2974 5197 4.326504 AAAATGGGCTTCTTGTGAACTG 57.673 40.909 0.00 0.00 0.00 3.16
2975 5198 1.915141 ATGGGCTTCTTGTGAACTGG 58.085 50.000 0.00 0.00 0.00 4.00
2976 5199 0.550914 TGGGCTTCTTGTGAACTGGT 59.449 50.000 0.00 0.00 0.00 4.00
2977 5200 0.954452 GGGCTTCTTGTGAACTGGTG 59.046 55.000 0.00 0.00 0.00 4.17
2978 5201 0.954452 GGCTTCTTGTGAACTGGTGG 59.046 55.000 0.00 0.00 0.00 4.61
2979 5202 1.476833 GGCTTCTTGTGAACTGGTGGA 60.477 52.381 0.00 0.00 0.00 4.02
2980 5203 1.876156 GCTTCTTGTGAACTGGTGGAG 59.124 52.381 0.00 0.00 0.00 3.86
2981 5204 2.746472 GCTTCTTGTGAACTGGTGGAGT 60.746 50.000 0.00 0.00 35.94 3.85
2982 5205 3.494398 GCTTCTTGTGAACTGGTGGAGTA 60.494 47.826 0.00 0.00 33.09 2.59
2983 5206 4.703897 CTTCTTGTGAACTGGTGGAGTAA 58.296 43.478 0.00 0.00 33.09 2.24
2984 5207 4.974645 TCTTGTGAACTGGTGGAGTAAT 57.025 40.909 0.00 0.00 33.09 1.89
2985 5208 4.894784 TCTTGTGAACTGGTGGAGTAATC 58.105 43.478 0.00 0.00 33.09 1.75
2986 5209 4.346709 TCTTGTGAACTGGTGGAGTAATCA 59.653 41.667 0.00 0.00 33.09 2.57
2987 5210 4.698201 TGTGAACTGGTGGAGTAATCAA 57.302 40.909 0.00 0.00 33.09 2.57
3530 5871 1.439679 GACGACTAAAACCCAGCAGG 58.560 55.000 0.00 0.00 43.78 4.85
3535 5876 2.239907 GACTAAAACCCAGCAGGAGGAT 59.760 50.000 0.00 0.00 39.89 3.24
3539 5880 2.196742 AACCCAGCAGGAGGATGATA 57.803 50.000 0.00 0.00 39.89 2.15
3546 5887 6.100859 ACCCAGCAGGAGGATGATAATATATG 59.899 42.308 0.00 0.00 39.89 1.78
3603 5949 3.017442 TGCAGGAGTAGTGCAGTAGTAG 58.983 50.000 8.93 4.17 45.96 2.57
3606 5952 4.035441 GCAGGAGTAGTGCAGTAGTAGTAC 59.965 50.000 8.93 0.00 40.86 2.73
3607 5953 5.430007 CAGGAGTAGTGCAGTAGTAGTACT 58.570 45.833 8.93 8.14 45.54 2.73
3608 5954 6.580788 CAGGAGTAGTGCAGTAGTAGTACTA 58.419 44.000 9.94 5.90 43.74 1.82
3609 5955 7.046652 CAGGAGTAGTGCAGTAGTAGTACTAA 58.953 42.308 11.64 0.00 43.74 2.24
3610 5956 7.551974 CAGGAGTAGTGCAGTAGTAGTACTAAA 59.448 40.741 11.64 0.00 43.74 1.85
3611 5957 7.769970 AGGAGTAGTGCAGTAGTAGTACTAAAG 59.230 40.741 11.64 8.43 43.74 1.85
3612 5958 7.319142 AGTAGTGCAGTAGTAGTACTAAAGC 57.681 40.000 20.40 20.40 42.48 3.51
3613 5959 7.111466 AGTAGTGCAGTAGTAGTACTAAAGCT 58.889 38.462 24.37 12.43 42.48 3.74
3703 6049 4.079253 CGAAAAAGAAAAGATCAGGGGGA 58.921 43.478 0.00 0.00 0.00 4.81
3725 6071 6.127054 GGGATGTATAGGCTGTATCTGCAATA 60.127 42.308 0.00 0.00 0.00 1.90
3783 6129 8.574251 TGGCACTATGTAAAATGTTTATCAGT 57.426 30.769 0.00 0.00 0.00 3.41
3803 6149 7.484035 TCAGTAAAAGAGCTTCTTGTTTCTC 57.516 36.000 0.00 0.00 36.71 2.87
3814 6160 4.768130 TCTTGTTTCTCTGACGTCTAGG 57.232 45.455 17.92 7.23 0.00 3.02
3817 6163 5.477291 TCTTGTTTCTCTGACGTCTAGGAAT 59.523 40.000 17.92 0.00 0.00 3.01
3818 6164 5.060662 TGTTTCTCTGACGTCTAGGAATG 57.939 43.478 17.92 2.59 0.00 2.67
3819 6165 4.523173 TGTTTCTCTGACGTCTAGGAATGT 59.477 41.667 17.92 0.00 0.00 2.71
3820 6166 5.010719 TGTTTCTCTGACGTCTAGGAATGTT 59.989 40.000 17.92 0.00 0.00 2.71
3821 6167 4.966965 TCTCTGACGTCTAGGAATGTTC 57.033 45.455 17.92 0.00 0.00 3.18
3822 6168 4.332828 TCTCTGACGTCTAGGAATGTTCA 58.667 43.478 17.92 0.00 0.00 3.18
3823 6169 4.156190 TCTCTGACGTCTAGGAATGTTCAC 59.844 45.833 17.92 0.00 0.00 3.18
3860 6207 3.873952 AGATAGAAAAAGATGCTGACCGC 59.126 43.478 0.00 0.00 39.77 5.68
3880 6233 2.686405 GCAAGCCAATGAGATCACATGA 59.314 45.455 6.39 0.00 0.00 3.07
3886 6239 4.023963 GCCAATGAGATCACATGACAGATG 60.024 45.833 6.39 0.45 0.00 2.90
3887 6240 5.123936 CCAATGAGATCACATGACAGATGT 58.876 41.667 6.39 0.00 0.00 3.06
3894 6247 6.939622 AGATCACATGACAGATGTTGAGTTA 58.060 36.000 0.00 0.00 0.00 2.24
3895 6248 7.040494 AGATCACATGACAGATGTTGAGTTAG 58.960 38.462 0.00 0.00 0.00 2.34
4011 6364 9.562408 TTACAATAGCAAATTTATATGACGGGA 57.438 29.630 0.00 0.00 0.00 5.14
4012 6365 8.458573 ACAATAGCAAATTTATATGACGGGAA 57.541 30.769 0.00 0.00 0.00 3.97
4013 6366 8.908903 ACAATAGCAAATTTATATGACGGGAAA 58.091 29.630 0.00 0.00 0.00 3.13
4014 6367 9.398170 CAATAGCAAATTTATATGACGGGAAAG 57.602 33.333 0.00 0.00 0.00 2.62
4015 6368 8.691661 ATAGCAAATTTATATGACGGGAAAGT 57.308 30.769 0.00 0.00 0.00 2.66
4016 6369 6.795399 AGCAAATTTATATGACGGGAAAGTG 58.205 36.000 0.00 0.00 0.00 3.16
4017 6370 6.377146 AGCAAATTTATATGACGGGAAAGTGT 59.623 34.615 0.00 0.00 0.00 3.55
4018 6371 7.554835 AGCAAATTTATATGACGGGAAAGTGTA 59.445 33.333 0.00 0.00 0.00 2.90
4019 6372 8.349983 GCAAATTTATATGACGGGAAAGTGTAT 58.650 33.333 0.00 0.00 0.00 2.29
4022 6375 9.621629 AATTTATATGACGGGAAAGTGTATTCA 57.378 29.630 0.00 0.00 0.00 2.57
4023 6376 9.621629 ATTTATATGACGGGAAAGTGTATTCAA 57.378 29.630 0.00 0.00 0.00 2.69
4024 6377 9.621629 TTTATATGACGGGAAAGTGTATTCAAT 57.378 29.630 0.00 0.00 0.00 2.57
4027 6380 9.793259 ATATGACGGGAAAGTGTATTCAATAAT 57.207 29.630 0.00 0.00 0.00 1.28
4028 6381 7.315247 TGACGGGAAAGTGTATTCAATAATG 57.685 36.000 0.00 0.00 0.00 1.90
4029 6382 7.106890 TGACGGGAAAGTGTATTCAATAATGA 58.893 34.615 0.00 0.00 0.00 2.57
4060 6413 9.729281 AAGATATTGATTTGTCAAAATTTGGCT 57.271 25.926 11.79 0.00 36.10 4.75
4061 6414 9.729281 AGATATTGATTTGTCAAAATTTGGCTT 57.271 25.926 11.79 0.00 36.10 4.35
4064 6417 7.621428 TTGATTTGTCAAAATTTGGCTTTGA 57.379 28.000 11.79 0.00 39.79 2.69
4106 6459 9.059023 AGAGTAAATAAAAATGGAGGGAGTACT 57.941 33.333 0.00 0.00 0.00 2.73
4107 6460 9.682465 GAGTAAATAAAAATGGAGGGAGTACTT 57.318 33.333 0.00 0.00 0.00 2.24
4108 6461 9.462606 AGTAAATAAAAATGGAGGGAGTACTTG 57.537 33.333 0.00 0.00 0.00 3.16
4109 6462 9.239551 GTAAATAAAAATGGAGGGAGTACTTGT 57.760 33.333 0.00 0.00 0.00 3.16
4110 6463 8.721133 AAATAAAAATGGAGGGAGTACTTGTT 57.279 30.769 0.00 0.00 0.00 2.83
4111 6464 7.703058 ATAAAAATGGAGGGAGTACTTGTTG 57.297 36.000 0.00 0.00 0.00 3.33
4112 6465 3.721087 AATGGAGGGAGTACTTGTTGG 57.279 47.619 0.00 0.00 0.00 3.77
4113 6466 2.112279 TGGAGGGAGTACTTGTTGGT 57.888 50.000 0.00 0.00 0.00 3.67
4114 6467 1.697432 TGGAGGGAGTACTTGTTGGTG 59.303 52.381 0.00 0.00 0.00 4.17
4115 6468 1.697982 GGAGGGAGTACTTGTTGGTGT 59.302 52.381 0.00 0.00 0.00 4.16
4116 6469 2.105993 GGAGGGAGTACTTGTTGGTGTT 59.894 50.000 0.00 0.00 0.00 3.32
4117 6470 3.139077 GAGGGAGTACTTGTTGGTGTTG 58.861 50.000 0.00 0.00 0.00 3.33
4118 6471 2.508300 AGGGAGTACTTGTTGGTGTTGT 59.492 45.455 0.00 0.00 0.00 3.32
4119 6472 3.053917 AGGGAGTACTTGTTGGTGTTGTT 60.054 43.478 0.00 0.00 0.00 2.83
4120 6473 3.066203 GGGAGTACTTGTTGGTGTTGTTG 59.934 47.826 0.00 0.00 0.00 3.33
4121 6474 3.692593 GGAGTACTTGTTGGTGTTGTTGT 59.307 43.478 0.00 0.00 0.00 3.32
4122 6475 4.877251 GGAGTACTTGTTGGTGTTGTTGTA 59.123 41.667 0.00 0.00 0.00 2.41
4123 6476 5.529800 GGAGTACTTGTTGGTGTTGTTGTAT 59.470 40.000 0.00 0.00 0.00 2.29
4124 6477 6.038936 GGAGTACTTGTTGGTGTTGTTGTATT 59.961 38.462 0.00 0.00 0.00 1.89
4125 6478 7.399245 AGTACTTGTTGGTGTTGTTGTATTT 57.601 32.000 0.00 0.00 0.00 1.40
4126 6479 7.254852 AGTACTTGTTGGTGTTGTTGTATTTG 58.745 34.615 0.00 0.00 0.00 2.32
4127 6480 4.867608 ACTTGTTGGTGTTGTTGTATTTGC 59.132 37.500 0.00 0.00 0.00 3.68
4128 6481 4.456280 TGTTGGTGTTGTTGTATTTGCA 57.544 36.364 0.00 0.00 0.00 4.08
4129 6482 4.820897 TGTTGGTGTTGTTGTATTTGCAA 58.179 34.783 0.00 0.00 0.00 4.08
4130 6483 4.867047 TGTTGGTGTTGTTGTATTTGCAAG 59.133 37.500 0.00 0.00 0.00 4.01
4131 6484 4.727507 TGGTGTTGTTGTATTTGCAAGT 57.272 36.364 0.00 0.00 0.00 3.16
4132 6485 4.428209 TGGTGTTGTTGTATTTGCAAGTG 58.572 39.130 4.47 0.00 0.00 3.16
4133 6486 3.801594 GGTGTTGTTGTATTTGCAAGTGG 59.198 43.478 4.47 0.00 0.00 4.00
4134 6487 4.429108 GTGTTGTTGTATTTGCAAGTGGT 58.571 39.130 4.47 0.00 0.00 4.16
4135 6488 5.450688 GGTGTTGTTGTATTTGCAAGTGGTA 60.451 40.000 4.47 0.00 0.00 3.25
4136 6489 6.037098 GTGTTGTTGTATTTGCAAGTGGTAA 58.963 36.000 4.47 0.00 0.00 2.85
4137 6490 6.198216 GTGTTGTTGTATTTGCAAGTGGTAAG 59.802 38.462 4.47 0.00 0.00 2.34
4138 6491 6.095580 TGTTGTTGTATTTGCAAGTGGTAAGA 59.904 34.615 4.47 0.00 0.00 2.10
4139 6492 6.892658 TGTTGTATTTGCAAGTGGTAAGAT 57.107 33.333 4.47 0.00 0.00 2.40
4140 6493 7.283625 TGTTGTATTTGCAAGTGGTAAGATT 57.716 32.000 4.47 0.00 0.00 2.40
4141 6494 7.367285 TGTTGTATTTGCAAGTGGTAAGATTC 58.633 34.615 4.47 0.00 0.00 2.52
4142 6495 7.013750 TGTTGTATTTGCAAGTGGTAAGATTCA 59.986 33.333 4.47 0.00 0.00 2.57
4143 6496 7.144722 TGTATTTGCAAGTGGTAAGATTCAG 57.855 36.000 4.47 0.00 0.00 3.02
4144 6497 6.714810 TGTATTTGCAAGTGGTAAGATTCAGT 59.285 34.615 4.47 0.00 0.00 3.41
4145 6498 5.437289 TTTGCAAGTGGTAAGATTCAGTG 57.563 39.130 0.00 0.00 0.00 3.66
4146 6499 4.085357 TGCAAGTGGTAAGATTCAGTGT 57.915 40.909 0.00 0.00 0.00 3.55
4147 6500 3.814842 TGCAAGTGGTAAGATTCAGTGTG 59.185 43.478 0.00 0.00 0.00 3.82
4148 6501 3.365364 GCAAGTGGTAAGATTCAGTGTGC 60.365 47.826 0.00 0.00 0.00 4.57
4149 6502 2.688507 AGTGGTAAGATTCAGTGTGCG 58.311 47.619 0.00 0.00 0.00 5.34
4150 6503 2.037251 AGTGGTAAGATTCAGTGTGCGT 59.963 45.455 0.00 0.00 0.00 5.24
4151 6504 2.157668 GTGGTAAGATTCAGTGTGCGTG 59.842 50.000 0.00 0.00 0.00 5.34
4152 6505 1.732259 GGTAAGATTCAGTGTGCGTGG 59.268 52.381 0.00 0.00 0.00 4.94
4153 6506 2.413837 GTAAGATTCAGTGTGCGTGGT 58.586 47.619 0.00 0.00 0.00 4.16
4154 6507 1.229428 AAGATTCAGTGTGCGTGGTG 58.771 50.000 0.00 0.00 0.00 4.17
4155 6508 0.603707 AGATTCAGTGTGCGTGGTGG 60.604 55.000 0.00 0.00 0.00 4.61
4156 6509 1.577328 GATTCAGTGTGCGTGGTGGG 61.577 60.000 0.00 0.00 0.00 4.61
4157 6510 4.927782 TCAGTGTGCGTGGTGGGC 62.928 66.667 0.00 0.00 0.00 5.36
4158 6511 4.935495 CAGTGTGCGTGGTGGGCT 62.935 66.667 0.00 0.00 0.00 5.19
4159 6512 3.238497 AGTGTGCGTGGTGGGCTA 61.238 61.111 0.00 0.00 0.00 3.93
4160 6513 2.046314 GTGTGCGTGGTGGGCTAT 60.046 61.111 0.00 0.00 0.00 2.97
4161 6514 1.219664 GTGTGCGTGGTGGGCTATA 59.780 57.895 0.00 0.00 0.00 1.31
4162 6515 0.391927 GTGTGCGTGGTGGGCTATAA 60.392 55.000 0.00 0.00 0.00 0.98
4163 6516 0.544223 TGTGCGTGGTGGGCTATAAT 59.456 50.000 0.00 0.00 0.00 1.28
4164 6517 1.226746 GTGCGTGGTGGGCTATAATC 58.773 55.000 0.00 0.00 0.00 1.75
4165 6518 0.833949 TGCGTGGTGGGCTATAATCA 59.166 50.000 0.00 0.00 0.00 2.57
4166 6519 1.210722 TGCGTGGTGGGCTATAATCAA 59.789 47.619 0.00 0.00 0.00 2.57
4167 6520 2.158682 TGCGTGGTGGGCTATAATCAAT 60.159 45.455 0.00 0.00 0.00 2.57
4168 6521 2.884639 GCGTGGTGGGCTATAATCAATT 59.115 45.455 0.00 0.00 0.00 2.32
4169 6522 4.069304 GCGTGGTGGGCTATAATCAATTA 58.931 43.478 0.00 0.00 0.00 1.40
4170 6523 4.154195 GCGTGGTGGGCTATAATCAATTAG 59.846 45.833 0.00 0.00 0.00 1.73
4171 6524 5.547465 CGTGGTGGGCTATAATCAATTAGA 58.453 41.667 0.00 0.00 0.00 2.10
4172 6525 5.639506 CGTGGTGGGCTATAATCAATTAGAG 59.360 44.000 0.98 0.98 35.33 2.43
4173 6526 6.518369 CGTGGTGGGCTATAATCAATTAGAGA 60.518 42.308 8.25 0.00 34.41 3.10
4174 6527 7.224297 GTGGTGGGCTATAATCAATTAGAGAA 58.776 38.462 8.25 0.00 34.41 2.87
4175 6528 7.389053 GTGGTGGGCTATAATCAATTAGAGAAG 59.611 40.741 8.25 0.00 34.41 2.85
4176 6529 7.072454 TGGTGGGCTATAATCAATTAGAGAAGT 59.928 37.037 8.25 0.00 34.41 3.01
4177 6530 8.594550 GGTGGGCTATAATCAATTAGAGAAGTA 58.405 37.037 8.25 0.00 34.41 2.24
4178 6531 9.998106 GTGGGCTATAATCAATTAGAGAAGTAA 57.002 33.333 8.25 0.00 34.41 2.24
4189 6542 9.847224 TCAATTAGAGAAGTAAAAGTCTGGTTT 57.153 29.630 0.00 0.00 0.00 3.27
4200 6553 8.658499 GTAAAAGTCTGGTTTTACTTCTCTCA 57.342 34.615 10.57 0.00 44.36 3.27
4201 6554 7.793927 AAAAGTCTGGTTTTACTTCTCTCAG 57.206 36.000 0.00 0.00 34.91 3.35
4202 6555 5.476091 AGTCTGGTTTTACTTCTCTCAGG 57.524 43.478 0.00 0.00 0.00 3.86
4203 6556 5.148502 AGTCTGGTTTTACTTCTCTCAGGA 58.851 41.667 0.00 0.00 0.00 3.86
4204 6557 5.011227 AGTCTGGTTTTACTTCTCTCAGGAC 59.989 44.000 0.00 0.00 0.00 3.85
4205 6558 4.283722 TCTGGTTTTACTTCTCTCAGGACC 59.716 45.833 0.00 0.00 0.00 4.46
4206 6559 4.232091 TGGTTTTACTTCTCTCAGGACCT 58.768 43.478 0.00 0.00 0.00 3.85
4207 6560 5.399991 TGGTTTTACTTCTCTCAGGACCTA 58.600 41.667 0.00 0.00 0.00 3.08
4208 6561 5.480772 TGGTTTTACTTCTCTCAGGACCTAG 59.519 44.000 0.00 0.00 0.00 3.02
4209 6562 5.412640 GTTTTACTTCTCTCAGGACCTAGC 58.587 45.833 0.00 0.00 0.00 3.42
4210 6563 2.153034 ACTTCTCTCAGGACCTAGCC 57.847 55.000 0.00 0.00 0.00 3.93
4211 6564 1.028905 CTTCTCTCAGGACCTAGCCG 58.971 60.000 0.00 0.00 0.00 5.52
4212 6565 0.624254 TTCTCTCAGGACCTAGCCGA 59.376 55.000 0.00 0.00 0.00 5.54
4213 6566 0.624254 TCTCTCAGGACCTAGCCGAA 59.376 55.000 0.00 0.00 0.00 4.30
4214 6567 0.741915 CTCTCAGGACCTAGCCGAAC 59.258 60.000 0.00 0.00 0.00 3.95
4215 6568 0.683504 TCTCAGGACCTAGCCGAACC 60.684 60.000 0.00 0.00 0.00 3.62
4216 6569 1.677637 CTCAGGACCTAGCCGAACCC 61.678 65.000 0.00 0.00 0.00 4.11
4217 6570 1.686110 CAGGACCTAGCCGAACCCT 60.686 63.158 0.00 0.00 0.00 4.34
4218 6571 1.080538 AGGACCTAGCCGAACCCTT 59.919 57.895 0.00 0.00 0.00 3.95
4219 6572 0.337428 AGGACCTAGCCGAACCCTTA 59.663 55.000 0.00 0.00 0.00 2.69
4220 6573 1.197812 GGACCTAGCCGAACCCTTAA 58.802 55.000 0.00 0.00 0.00 1.85
4221 6574 1.556451 GGACCTAGCCGAACCCTTAAA 59.444 52.381 0.00 0.00 0.00 1.52
4222 6575 2.026915 GGACCTAGCCGAACCCTTAAAA 60.027 50.000 0.00 0.00 0.00 1.52
4223 6576 3.371273 GGACCTAGCCGAACCCTTAAAAT 60.371 47.826 0.00 0.00 0.00 1.82
4224 6577 3.875727 GACCTAGCCGAACCCTTAAAATC 59.124 47.826 0.00 0.00 0.00 2.17
4225 6578 2.870411 CCTAGCCGAACCCTTAAAATCG 59.130 50.000 0.00 0.00 35.19 3.34
4226 6579 2.484742 AGCCGAACCCTTAAAATCGT 57.515 45.000 0.00 0.00 33.65 3.73
4227 6580 2.786777 AGCCGAACCCTTAAAATCGTT 58.213 42.857 0.00 0.00 33.65 3.85
4228 6581 3.941573 AGCCGAACCCTTAAAATCGTTA 58.058 40.909 0.00 0.00 33.65 3.18
4229 6582 3.937079 AGCCGAACCCTTAAAATCGTTAG 59.063 43.478 0.00 0.00 33.65 2.34
4230 6583 3.934579 GCCGAACCCTTAAAATCGTTAGA 59.065 43.478 0.00 0.00 33.65 2.10
4231 6584 4.033702 GCCGAACCCTTAAAATCGTTAGAG 59.966 45.833 0.00 0.00 33.65 2.43
4232 6585 5.173664 CCGAACCCTTAAAATCGTTAGAGT 58.826 41.667 0.00 0.00 33.65 3.24
4233 6586 6.332630 CCGAACCCTTAAAATCGTTAGAGTA 58.667 40.000 0.00 0.00 33.65 2.59
4234 6587 6.254373 CCGAACCCTTAAAATCGTTAGAGTAC 59.746 42.308 0.00 0.00 33.65 2.73
4235 6588 6.808212 CGAACCCTTAAAATCGTTAGAGTACA 59.192 38.462 0.00 0.00 0.00 2.90
4236 6589 7.329226 CGAACCCTTAAAATCGTTAGAGTACAA 59.671 37.037 0.00 0.00 0.00 2.41
4237 6590 9.159364 GAACCCTTAAAATCGTTAGAGTACAAT 57.841 33.333 0.00 0.00 0.00 2.71
4238 6591 9.511272 AACCCTTAAAATCGTTAGAGTACAATT 57.489 29.630 0.00 0.00 0.00 2.32
4239 6592 9.511272 ACCCTTAAAATCGTTAGAGTACAATTT 57.489 29.630 0.00 0.00 0.00 1.82
4249 6602 9.745880 TCGTTAGAGTACAATTTATCCTTCATC 57.254 33.333 0.00 0.00 0.00 2.92
4250 6603 8.691727 CGTTAGAGTACAATTTATCCTTCATCG 58.308 37.037 0.00 0.00 0.00 3.84
4251 6604 8.488764 GTTAGAGTACAATTTATCCTTCATCGC 58.511 37.037 0.00 0.00 0.00 4.58
4252 6605 6.821388 AGAGTACAATTTATCCTTCATCGCT 58.179 36.000 0.00 0.00 0.00 4.93
4253 6606 7.275920 AGAGTACAATTTATCCTTCATCGCTT 58.724 34.615 0.00 0.00 0.00 4.68
4254 6607 8.421784 AGAGTACAATTTATCCTTCATCGCTTA 58.578 33.333 0.00 0.00 0.00 3.09
4255 6608 9.209175 GAGTACAATTTATCCTTCATCGCTTAT 57.791 33.333 0.00 0.00 0.00 1.73
4256 6609 9.209175 AGTACAATTTATCCTTCATCGCTTATC 57.791 33.333 0.00 0.00 0.00 1.75
4257 6610 7.440523 ACAATTTATCCTTCATCGCTTATCC 57.559 36.000 0.00 0.00 0.00 2.59
4258 6611 6.431234 ACAATTTATCCTTCATCGCTTATCCC 59.569 38.462 0.00 0.00 0.00 3.85
4259 6612 2.751166 ATCCTTCATCGCTTATCCCG 57.249 50.000 0.00 0.00 0.00 5.14
4260 6613 0.033504 TCCTTCATCGCTTATCCCGC 59.966 55.000 0.00 0.00 0.00 6.13
4261 6614 0.249868 CCTTCATCGCTTATCCCGCA 60.250 55.000 0.00 0.00 0.00 5.69
4262 6615 0.861837 CTTCATCGCTTATCCCGCAC 59.138 55.000 0.00 0.00 0.00 5.34
4263 6616 0.176910 TTCATCGCTTATCCCGCACA 59.823 50.000 0.00 0.00 0.00 4.57
4264 6617 0.392706 TCATCGCTTATCCCGCACAT 59.607 50.000 0.00 0.00 0.00 3.21
4265 6618 1.616374 TCATCGCTTATCCCGCACATA 59.384 47.619 0.00 0.00 0.00 2.29
4266 6619 2.233676 TCATCGCTTATCCCGCACATAT 59.766 45.455 0.00 0.00 0.00 1.78
4267 6620 2.078849 TCGCTTATCCCGCACATATG 57.921 50.000 0.00 0.00 0.00 1.78
4268 6621 1.343142 TCGCTTATCCCGCACATATGT 59.657 47.619 1.41 1.41 0.00 2.29
4269 6622 2.559231 TCGCTTATCCCGCACATATGTA 59.441 45.455 8.32 0.00 0.00 2.29
4270 6623 2.666508 CGCTTATCCCGCACATATGTAC 59.333 50.000 8.32 1.36 0.00 2.90
4271 6624 3.614150 CGCTTATCCCGCACATATGTACT 60.614 47.826 8.32 0.00 0.00 2.73
4272 6625 3.927142 GCTTATCCCGCACATATGTACTC 59.073 47.826 8.32 0.15 0.00 2.59
4273 6626 4.495422 CTTATCCCGCACATATGTACTCC 58.505 47.826 8.32 0.00 0.00 3.85
4274 6627 1.783071 TCCCGCACATATGTACTCCA 58.217 50.000 8.32 0.00 0.00 3.86
4275 6628 1.411246 TCCCGCACATATGTACTCCAC 59.589 52.381 8.32 0.00 0.00 4.02
4276 6629 1.540363 CCCGCACATATGTACTCCACC 60.540 57.143 8.32 0.00 0.00 4.61
4277 6630 1.487482 CGCACATATGTACTCCACCG 58.513 55.000 8.32 0.00 0.00 4.94
4278 6631 1.217882 GCACATATGTACTCCACCGC 58.782 55.000 8.32 1.26 0.00 5.68
4279 6632 1.202533 GCACATATGTACTCCACCGCT 60.203 52.381 8.32 0.00 0.00 5.52
4280 6633 2.743938 CACATATGTACTCCACCGCTC 58.256 52.381 8.32 0.00 0.00 5.03
4281 6634 2.100749 CACATATGTACTCCACCGCTCA 59.899 50.000 8.32 0.00 0.00 4.26
4282 6635 2.764010 ACATATGTACTCCACCGCTCAA 59.236 45.455 6.56 0.00 0.00 3.02
4283 6636 3.388024 ACATATGTACTCCACCGCTCAAT 59.612 43.478 6.56 0.00 0.00 2.57
4284 6637 2.315925 ATGTACTCCACCGCTCAATG 57.684 50.000 0.00 0.00 0.00 2.82
4285 6638 1.262417 TGTACTCCACCGCTCAATGA 58.738 50.000 0.00 0.00 0.00 2.57
4286 6639 1.067142 TGTACTCCACCGCTCAATGAC 60.067 52.381 0.00 0.00 0.00 3.06
4287 6640 1.067142 GTACTCCACCGCTCAATGACA 60.067 52.381 0.00 0.00 0.00 3.58
4288 6641 0.615331 ACTCCACCGCTCAATGACAT 59.385 50.000 0.00 0.00 0.00 3.06
4289 6642 1.831106 ACTCCACCGCTCAATGACATA 59.169 47.619 0.00 0.00 0.00 2.29
4290 6643 2.159043 ACTCCACCGCTCAATGACATAG 60.159 50.000 0.00 0.00 0.00 2.23
4291 6644 1.831106 TCCACCGCTCAATGACATAGT 59.169 47.619 0.00 0.00 0.00 2.12
4292 6645 3.028130 TCCACCGCTCAATGACATAGTA 58.972 45.455 0.00 0.00 0.00 1.82
4293 6646 3.449377 TCCACCGCTCAATGACATAGTAA 59.551 43.478 0.00 0.00 0.00 2.24
4294 6647 4.081365 TCCACCGCTCAATGACATAGTAAA 60.081 41.667 0.00 0.00 0.00 2.01
4295 6648 4.634004 CCACCGCTCAATGACATAGTAAAA 59.366 41.667 0.00 0.00 0.00 1.52
4296 6649 5.123186 CCACCGCTCAATGACATAGTAAAAA 59.877 40.000 0.00 0.00 0.00 1.94
4316 6669 3.510531 AAAACTTCACCCTTCTCTCCC 57.489 47.619 0.00 0.00 0.00 4.30
4317 6670 2.118403 AACTTCACCCTTCTCTCCCA 57.882 50.000 0.00 0.00 0.00 4.37
4318 6671 1.353091 ACTTCACCCTTCTCTCCCAC 58.647 55.000 0.00 0.00 0.00 4.61
4319 6672 1.132689 ACTTCACCCTTCTCTCCCACT 60.133 52.381 0.00 0.00 0.00 4.00
4320 6673 1.981495 CTTCACCCTTCTCTCCCACTT 59.019 52.381 0.00 0.00 0.00 3.16
4321 6674 1.352083 TCACCCTTCTCTCCCACTTG 58.648 55.000 0.00 0.00 0.00 3.16
4322 6675 1.059913 CACCCTTCTCTCCCACTTGT 58.940 55.000 0.00 0.00 0.00 3.16
4323 6676 1.002544 CACCCTTCTCTCCCACTTGTC 59.997 57.143 0.00 0.00 0.00 3.18
4324 6677 0.615850 CCCTTCTCTCCCACTTGTCC 59.384 60.000 0.00 0.00 0.00 4.02
4325 6678 1.650528 CCTTCTCTCCCACTTGTCCT 58.349 55.000 0.00 0.00 0.00 3.85
4326 6679 1.552792 CCTTCTCTCCCACTTGTCCTC 59.447 57.143 0.00 0.00 0.00 3.71
4327 6680 1.552792 CTTCTCTCCCACTTGTCCTCC 59.447 57.143 0.00 0.00 0.00 4.30
4328 6681 0.252284 TCTCTCCCACTTGTCCTCCC 60.252 60.000 0.00 0.00 0.00 4.30
4329 6682 1.229529 TCTCCCACTTGTCCTCCCC 60.230 63.158 0.00 0.00 0.00 4.81
4330 6683 1.538876 CTCCCACTTGTCCTCCCCA 60.539 63.158 0.00 0.00 0.00 4.96
4331 6684 1.073319 TCCCACTTGTCCTCCCCAA 60.073 57.895 0.00 0.00 0.00 4.12
4332 6685 0.699577 TCCCACTTGTCCTCCCCAAA 60.700 55.000 0.00 0.00 0.00 3.28
4333 6686 0.539669 CCCACTTGTCCTCCCCAAAC 60.540 60.000 0.00 0.00 0.00 2.93
4334 6687 0.539669 CCACTTGTCCTCCCCAAACC 60.540 60.000 0.00 0.00 0.00 3.27
4335 6688 0.539669 CACTTGTCCTCCCCAAACCC 60.540 60.000 0.00 0.00 0.00 4.11
4336 6689 1.076727 CTTGTCCTCCCCAAACCCC 59.923 63.158 0.00 0.00 0.00 4.95
4337 6690 2.764637 CTTGTCCTCCCCAAACCCCG 62.765 65.000 0.00 0.00 0.00 5.73
4338 6691 4.735358 GTCCTCCCCAAACCCCGC 62.735 72.222 0.00 0.00 0.00 6.13
4339 6692 4.995058 TCCTCCCCAAACCCCGCT 62.995 66.667 0.00 0.00 0.00 5.52
4340 6693 4.740822 CCTCCCCAAACCCCGCTG 62.741 72.222 0.00 0.00 0.00 5.18
4341 6694 3.966543 CTCCCCAAACCCCGCTGT 61.967 66.667 0.00 0.00 0.00 4.40
4342 6695 3.920093 CTCCCCAAACCCCGCTGTC 62.920 68.421 0.00 0.00 0.00 3.51
4362 6715 4.587189 CGAATCCTCGCCGTCCCC 62.587 72.222 0.00 0.00 38.45 4.81
4363 6716 4.237207 GAATCCTCGCCGTCCCCC 62.237 72.222 0.00 0.00 0.00 5.40
4374 6727 3.159347 GTCCCCCGTCGCCCTAAT 61.159 66.667 0.00 0.00 0.00 1.73
4375 6728 3.158648 TCCCCCGTCGCCCTAATG 61.159 66.667 0.00 0.00 0.00 1.90
4376 6729 4.250305 CCCCCGTCGCCCTAATGG 62.250 72.222 0.00 0.00 37.09 3.16
4385 6738 2.757077 CCCTAATGGCCGGATCCC 59.243 66.667 5.05 0.00 0.00 3.85
4387 6740 2.516888 CCTAATGGCCGGATCCCGT 61.517 63.158 5.05 0.00 46.80 5.28
4388 6741 1.301716 CTAATGGCCGGATCCCGTG 60.302 63.158 5.05 0.00 46.80 4.94
4389 6742 2.040009 CTAATGGCCGGATCCCGTGT 62.040 60.000 5.05 0.00 46.80 4.49
4390 6743 2.035237 TAATGGCCGGATCCCGTGTC 62.035 60.000 5.05 0.00 46.80 3.67
4393 6746 4.832608 GCCGGATCCCGTGTCCAC 62.833 72.222 5.05 0.00 46.80 4.02
4394 6747 3.075005 CCGGATCCCGTGTCCACT 61.075 66.667 6.06 0.00 46.80 4.00
4395 6748 1.755395 CCGGATCCCGTGTCCACTA 60.755 63.158 6.06 0.00 46.80 2.74
4396 6749 1.734137 CGGATCCCGTGTCCACTAG 59.266 63.158 6.06 0.00 42.73 2.57
4397 6750 1.035932 CGGATCCCGTGTCCACTAGT 61.036 60.000 6.06 0.00 42.73 2.57
4398 6751 0.745468 GGATCCCGTGTCCACTAGTC 59.255 60.000 0.00 0.00 35.76 2.59
4399 6752 0.745468 GATCCCGTGTCCACTAGTCC 59.255 60.000 0.00 0.00 0.00 3.85
4400 6753 0.686769 ATCCCGTGTCCACTAGTCCC 60.687 60.000 0.00 0.00 0.00 4.46
4401 6754 2.356780 CCCGTGTCCACTAGTCCCC 61.357 68.421 0.00 0.00 0.00 4.81
4402 6755 2.707849 CCGTGTCCACTAGTCCCCG 61.708 68.421 0.00 0.00 0.00 5.73
4403 6756 2.577593 GTGTCCACTAGTCCCCGC 59.422 66.667 0.00 0.00 0.00 6.13
4404 6757 2.682494 TGTCCACTAGTCCCCGCC 60.682 66.667 0.00 0.00 0.00 6.13
4405 6758 3.834799 GTCCACTAGTCCCCGCCG 61.835 72.222 0.00 0.00 0.00 6.46
4425 6778 4.520846 CGTTTGCAGCGCGGATCC 62.521 66.667 13.03 0.00 0.00 3.36
4426 6779 3.430862 GTTTGCAGCGCGGATCCA 61.431 61.111 13.03 0.00 0.00 3.41
4427 6780 3.430862 TTTGCAGCGCGGATCCAC 61.431 61.111 13.03 0.00 0.00 4.02
4438 6791 3.499737 GATCCACGCCGCCACAAG 61.500 66.667 0.00 0.00 0.00 3.16
4444 6797 4.980903 CGCCGCCACAAGCACAAC 62.981 66.667 0.00 0.00 44.04 3.32
4445 6798 3.898509 GCCGCCACAAGCACAACA 61.899 61.111 0.00 0.00 44.04 3.33
4446 6799 2.026014 CCGCCACAAGCACAACAC 59.974 61.111 0.00 0.00 44.04 3.32
4447 6800 2.352229 CGCCACAAGCACAACACG 60.352 61.111 0.00 0.00 44.04 4.49
4448 6801 2.026014 GCCACAAGCACAACACGG 59.974 61.111 0.00 0.00 42.97 4.94
4449 6802 2.477176 GCCACAAGCACAACACGGA 61.477 57.895 0.00 0.00 42.97 4.69
4450 6803 1.795170 GCCACAAGCACAACACGGAT 61.795 55.000 0.00 0.00 42.97 4.18
4451 6804 0.040157 CCACAAGCACAACACGGATG 60.040 55.000 0.00 0.00 0.00 3.51
4452 6805 0.661187 CACAAGCACAACACGGATGC 60.661 55.000 0.00 0.00 39.74 3.91
4453 6806 1.440850 CAAGCACAACACGGATGCG 60.441 57.895 4.58 4.58 44.25 4.73
4454 6807 1.891919 AAGCACAACACGGATGCGT 60.892 52.632 6.39 6.39 44.25 5.24
4455 6808 1.841663 AAGCACAACACGGATGCGTC 61.842 55.000 10.14 0.00 44.25 5.19
4456 6809 2.860293 CACAACACGGATGCGTCC 59.140 61.111 15.54 15.54 41.40 4.79
4457 6810 1.667830 CACAACACGGATGCGTCCT 60.668 57.895 22.53 7.21 42.73 3.85
4458 6811 1.374252 ACAACACGGATGCGTCCTC 60.374 57.895 22.53 0.00 42.73 3.71
4459 6812 2.100631 CAACACGGATGCGTCCTCC 61.101 63.158 22.53 3.98 42.73 4.30
4460 6813 2.283529 AACACGGATGCGTCCTCCT 61.284 57.895 22.53 2.20 42.73 3.69
4461 6814 2.105128 CACGGATGCGTCCTCCTC 59.895 66.667 22.53 0.00 42.73 3.71
4462 6815 3.518998 ACGGATGCGTCCTCCTCG 61.519 66.667 22.53 11.26 42.73 4.63
4492 6845 3.665544 CAACACTGCAACCCCTTTG 57.334 52.632 0.00 0.00 38.37 2.77
4493 6846 0.104671 CAACACTGCAACCCCTTTGG 59.895 55.000 0.00 0.00 41.37 3.28
4502 6855 2.612251 CCCCTTTGGTGGGTTGGT 59.388 61.111 0.00 0.00 45.70 3.67
4503 6856 1.533033 CCCCTTTGGTGGGTTGGTC 60.533 63.158 0.00 0.00 45.70 4.02
4504 6857 1.901464 CCCTTTGGTGGGTTGGTCG 60.901 63.158 0.00 0.00 42.25 4.79
4505 6858 1.901464 CCTTTGGTGGGTTGGTCGG 60.901 63.158 0.00 0.00 0.00 4.79
4506 6859 2.519780 TTTGGTGGGTTGGTCGGC 60.520 61.111 0.00 0.00 0.00 5.54
4507 6860 2.976494 CTTTGGTGGGTTGGTCGGCT 62.976 60.000 0.00 0.00 0.00 5.52
4508 6861 2.575455 TTTGGTGGGTTGGTCGGCTT 62.575 55.000 0.00 0.00 0.00 4.35
4509 6862 2.983592 GGTGGGTTGGTCGGCTTG 60.984 66.667 0.00 0.00 0.00 4.01
4510 6863 3.670377 GTGGGTTGGTCGGCTTGC 61.670 66.667 0.00 0.00 0.00 4.01
4511 6864 3.884774 TGGGTTGGTCGGCTTGCT 61.885 61.111 0.00 0.00 0.00 3.91
4512 6865 2.597510 GGGTTGGTCGGCTTGCTT 60.598 61.111 0.00 0.00 0.00 3.91
4513 6866 2.644992 GGTTGGTCGGCTTGCTTG 59.355 61.111 0.00 0.00 0.00 4.01
4514 6867 2.050077 GTTGGTCGGCTTGCTTGC 60.050 61.111 0.00 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.142790 TCGCTAGCTATAGTTACCAAGCT 58.857 43.478 13.93 8.39 46.58 3.74
1 2 4.500603 TCGCTAGCTATAGTTACCAAGC 57.499 45.455 13.93 0.55 35.16 4.01
2 3 6.074544 AGTTCGCTAGCTATAGTTACCAAG 57.925 41.667 13.93 0.00 0.00 3.61
3 4 6.461110 AAGTTCGCTAGCTATAGTTACCAA 57.539 37.500 13.93 0.00 0.00 3.67
4 5 6.127535 ACAAAGTTCGCTAGCTATAGTTACCA 60.128 38.462 13.93 0.00 0.00 3.25
5 6 6.271566 ACAAAGTTCGCTAGCTATAGTTACC 58.728 40.000 13.93 0.00 0.00 2.85
6 7 7.752557 AACAAAGTTCGCTAGCTATAGTTAC 57.247 36.000 13.93 0.00 0.00 2.50
7 8 8.030692 TGAAACAAAGTTCGCTAGCTATAGTTA 58.969 33.333 13.93 0.00 0.00 2.24
8 9 6.872020 TGAAACAAAGTTCGCTAGCTATAGTT 59.128 34.615 13.93 5.65 0.00 2.24
9 10 6.395629 TGAAACAAAGTTCGCTAGCTATAGT 58.604 36.000 13.93 0.00 0.00 2.12
10 11 6.752351 TCTGAAACAAAGTTCGCTAGCTATAG 59.248 38.462 13.93 0.00 0.00 1.31
11 12 6.627243 TCTGAAACAAAGTTCGCTAGCTATA 58.373 36.000 13.93 0.00 0.00 1.31
12 13 5.479306 TCTGAAACAAAGTTCGCTAGCTAT 58.521 37.500 13.93 0.00 0.00 2.97
13 14 4.878439 TCTGAAACAAAGTTCGCTAGCTA 58.122 39.130 13.93 0.00 0.00 3.32
14 15 3.728845 TCTGAAACAAAGTTCGCTAGCT 58.271 40.909 13.93 0.00 0.00 3.32
15 16 3.741344 TCTCTGAAACAAAGTTCGCTAGC 59.259 43.478 4.06 4.06 0.00 3.42
16 17 4.150804 GGTCTCTGAAACAAAGTTCGCTAG 59.849 45.833 0.00 0.00 0.00 3.42
17 18 4.056050 GGTCTCTGAAACAAAGTTCGCTA 58.944 43.478 0.00 0.00 0.00 4.26
18 19 2.872858 GGTCTCTGAAACAAAGTTCGCT 59.127 45.455 0.00 0.00 0.00 4.93
19 20 2.872858 AGGTCTCTGAAACAAAGTTCGC 59.127 45.455 0.00 0.00 0.00 4.70
20 21 5.290386 AGTAGGTCTCTGAAACAAAGTTCG 58.710 41.667 0.00 0.00 0.00 3.95
21 22 5.697178 GGAGTAGGTCTCTGAAACAAAGTTC 59.303 44.000 0.00 0.00 42.40 3.01
22 23 5.367060 AGGAGTAGGTCTCTGAAACAAAGTT 59.633 40.000 0.00 0.00 42.40 2.66
23 24 4.902448 AGGAGTAGGTCTCTGAAACAAAGT 59.098 41.667 0.00 0.00 42.40 2.66
24 25 5.476091 AGGAGTAGGTCTCTGAAACAAAG 57.524 43.478 0.00 0.00 42.40 2.77
25 26 6.553852 AGTTAGGAGTAGGTCTCTGAAACAAA 59.446 38.462 0.00 0.00 42.40 2.83
49 50 1.469308 CGCTCCGATTAGCCCTACTAG 59.531 57.143 0.00 0.00 39.43 2.57
70 71 3.947841 CTCTCTCCCTCTCGCGCG 61.948 72.222 26.76 26.76 0.00 6.86
71 72 4.264638 GCTCTCTCCCTCTCGCGC 62.265 72.222 0.00 0.00 0.00 6.86
72 73 2.826287 TGCTCTCTCCCTCTCGCG 60.826 66.667 0.00 0.00 0.00 5.87
73 74 1.034838 TTCTGCTCTCTCCCTCTCGC 61.035 60.000 0.00 0.00 0.00 5.03
74 75 1.024271 CTTCTGCTCTCTCCCTCTCG 58.976 60.000 0.00 0.00 0.00 4.04
80 90 0.172352 CCGTCACTTCTGCTCTCTCC 59.828 60.000 0.00 0.00 0.00 3.71
228 238 3.939592 TCACTCATCACAGTAGGAGTACG 59.060 47.826 0.00 0.00 38.48 3.67
237 247 1.051008 TGGCACTCACTCATCACAGT 58.949 50.000 0.00 0.00 0.00 3.55
344 360 4.022849 GGTGTGATCAAAGAAAGTTCAGGG 60.023 45.833 0.00 0.00 0.00 4.45
431 448 2.749621 ACGGCTTAAGCTCCTTCATTTG 59.250 45.455 25.88 6.79 41.70 2.32
460 477 9.837525 CTAAACTCACACTCGTATAGTAGTTTT 57.162 33.333 8.86 0.00 39.71 2.43
461 478 8.457261 CCTAAACTCACACTCGTATAGTAGTTT 58.543 37.037 0.00 0.00 42.79 2.66
462 479 7.826252 TCCTAAACTCACACTCGTATAGTAGTT 59.174 37.037 0.00 0.00 36.51 2.24
463 480 7.334090 TCCTAAACTCACACTCGTATAGTAGT 58.666 38.462 0.00 0.00 35.76 2.73
464 481 7.518689 GCTCCTAAACTCACACTCGTATAGTAG 60.519 44.444 0.00 0.00 35.76 2.57
465 482 6.259608 GCTCCTAAACTCACACTCGTATAGTA 59.740 42.308 0.00 0.00 35.76 1.82
466 483 5.066246 GCTCCTAAACTCACACTCGTATAGT 59.934 44.000 0.00 0.00 39.81 2.12
467 484 5.505985 GGCTCCTAAACTCACACTCGTATAG 60.506 48.000 0.00 0.00 0.00 1.31
468 485 4.337555 GGCTCCTAAACTCACACTCGTATA 59.662 45.833 0.00 0.00 0.00 1.47
477 494 0.391263 CCACCGGCTCCTAAACTCAC 60.391 60.000 0.00 0.00 0.00 3.51
481 498 1.449778 GCTCCACCGGCTCCTAAAC 60.450 63.158 0.00 0.00 0.00 2.01
507 542 2.728535 CGTCGGTTGGTTTGTTCGTTTT 60.729 45.455 0.00 0.00 0.00 2.43
530 565 1.080501 AGACATCTGTGGCGACGTG 60.081 57.895 0.00 0.00 38.86 4.49
531 566 1.080501 CAGACATCTGTGGCGACGT 60.081 57.895 0.40 0.00 38.86 4.34
532 567 2.447887 GCAGACATCTGTGGCGACG 61.448 63.158 10.50 0.00 45.45 5.12
533 568 0.950555 TTGCAGACATCTGTGGCGAC 60.951 55.000 10.50 0.00 45.45 5.19
534 569 0.950555 GTTGCAGACATCTGTGGCGA 60.951 55.000 10.50 0.00 45.45 5.54
535 570 0.952497 AGTTGCAGACATCTGTGGCG 60.952 55.000 10.50 0.00 45.45 5.69
536 571 0.520404 CAGTTGCAGACATCTGTGGC 59.480 55.000 10.50 0.00 45.45 5.01
537 572 0.520404 GCAGTTGCAGACATCTGTGG 59.480 55.000 10.50 0.00 45.45 4.17
604 659 2.599578 CTTGGTTGGCCTGCAGCT 60.600 61.111 8.66 0.00 43.05 4.24
743 798 1.278699 ACGGGCGGAAGGTTAAATACA 59.721 47.619 0.00 0.00 0.00 2.29
846 901 1.543802 GTGAGTGAGGAGGTGAGTGAG 59.456 57.143 0.00 0.00 0.00 3.51
847 902 1.621992 GTGAGTGAGGAGGTGAGTGA 58.378 55.000 0.00 0.00 0.00 3.41
849 904 0.543174 GGGTGAGTGAGGAGGTGAGT 60.543 60.000 0.00 0.00 0.00 3.41
851 906 0.542938 CTGGGTGAGTGAGGAGGTGA 60.543 60.000 0.00 0.00 0.00 4.02
853 908 0.543174 GACTGGGTGAGTGAGGAGGT 60.543 60.000 0.00 0.00 33.83 3.85
855 910 0.896019 ACGACTGGGTGAGTGAGGAG 60.896 60.000 0.00 0.00 33.83 3.69
856 911 0.894184 GACGACTGGGTGAGTGAGGA 60.894 60.000 0.00 0.00 33.83 3.71
861 919 1.957562 CTTCGACGACTGGGTGAGT 59.042 57.895 0.00 0.00 37.76 3.41
862 920 1.444553 GCTTCGACGACTGGGTGAG 60.445 63.158 0.00 0.00 0.00 3.51
865 923 0.670546 CAATGCTTCGACGACTGGGT 60.671 55.000 0.00 0.00 0.00 4.51
867 925 1.590238 GATCAATGCTTCGACGACTGG 59.410 52.381 0.00 0.00 0.00 4.00
871 929 2.473816 GATGGATCAATGCTTCGACGA 58.526 47.619 0.00 0.00 0.00 4.20
874 932 1.412343 TCCGATGGATCAATGCTTCGA 59.588 47.619 17.33 5.20 44.46 3.71
882 940 1.153449 GCACCGTCCGATGGATCAA 60.153 57.895 13.92 0.00 32.73 2.57
883 941 2.058001 AGCACCGTCCGATGGATCA 61.058 57.895 13.92 0.00 32.73 2.92
888 946 2.741985 TTGCAGCACCGTCCGATG 60.742 61.111 0.00 0.00 0.00 3.84
889 947 2.434884 CTTGCAGCACCGTCCGAT 60.435 61.111 0.00 0.00 0.00 4.18
900 958 1.077123 CACTCACTAGCTGCTTGCAG 58.923 55.000 17.34 17.34 45.94 4.41
901 959 0.952497 GCACTCACTAGCTGCTTGCA 60.952 55.000 7.79 0.00 45.94 4.08
902 960 0.673022 AGCACTCACTAGCTGCTTGC 60.673 55.000 7.79 10.72 40.13 4.01
903 961 3.529252 AGCACTCACTAGCTGCTTG 57.471 52.632 7.79 8.80 40.13 4.01
914 972 1.228337 AGTGGCAATGCAGCACTCA 60.228 52.632 7.79 0.00 35.83 3.41
915 973 1.211969 CAGTGGCAATGCAGCACTC 59.788 57.895 12.96 0.00 35.83 3.51
1556 1655 0.906282 GGGAGGGGTCGACCTTGTAA 60.906 60.000 32.52 0.00 42.10 2.41
1679 1778 2.125310 CGACTTACGGCCATGGCA 60.125 61.111 36.56 15.51 44.11 4.92
1697 1796 0.455295 GTCGTCAGAGTCGAGGCTTG 60.455 60.000 0.00 0.00 37.99 4.01
1698 1797 0.606944 AGTCGTCAGAGTCGAGGCTT 60.607 55.000 0.00 0.00 37.99 4.35
1699 1798 1.003112 AGTCGTCAGAGTCGAGGCT 60.003 57.895 0.00 0.00 37.99 4.58
1764 1874 1.299541 ACTTGAACACCTGCTCGTTG 58.700 50.000 0.00 0.00 0.00 4.10
2033 2365 5.647589 TGCAGTACTGTATGTTACTAGTGC 58.352 41.667 23.44 5.93 36.80 4.40
2036 2368 6.980978 AGCAATGCAGTACTGTATGTTACTAG 59.019 38.462 24.68 11.22 36.07 2.57
2037 2369 6.873997 AGCAATGCAGTACTGTATGTTACTA 58.126 36.000 24.68 2.23 36.07 1.82
2086 2544 4.943705 TCCTATTCTCAGGAAATGTTGTGC 59.056 41.667 0.00 0.00 41.88 4.57
2107 2565 0.671472 GCCAAAGTGCCAATGCTTCC 60.671 55.000 0.00 0.00 38.71 3.46
2161 2619 4.750098 CGGAAGGAATATCGCATAACTTGT 59.250 41.667 0.00 0.00 0.00 3.16
2185 2643 4.386652 GCATACAAAGACCAAAGTTGCATG 59.613 41.667 0.00 0.00 31.80 4.06
2253 2716 4.281941 TCATTAGATCGAGTGGCTTGCTAT 59.718 41.667 0.00 0.00 0.00 2.97
2299 2762 7.010923 CACATGCAAAGCTTAAAGGTGTAAAAA 59.989 33.333 0.00 0.00 0.00 1.94
2362 3492 1.442526 GATCCGCTGGCAAGATGTGG 61.443 60.000 0.00 0.00 0.00 4.17
2365 3495 1.783031 GCTGATCCGCTGGCAAGATG 61.783 60.000 1.31 0.00 0.00 2.90
2401 3561 0.031314 ATCAGTAGCATCTGCCGTCG 59.969 55.000 0.00 0.00 43.38 5.12
2485 3811 3.379372 AGAATGCATGCACACTCCATTAC 59.621 43.478 25.37 5.99 0.00 1.89
2584 4331 1.152226 CAGGGGCCTAGGTAGGAGG 60.152 68.421 11.31 0.00 46.63 4.30
2629 4376 1.338769 CCTAAAAGGTGCTGCTACCGT 60.339 52.381 13.15 8.97 45.56 4.83
2642 4389 0.392595 GACCCGTGAGCCCCTAAAAG 60.393 60.000 0.00 0.00 0.00 2.27
2646 4393 3.674050 GAGGACCCGTGAGCCCCTA 62.674 68.421 0.00 0.00 0.00 3.53
2721 4468 7.676947 ACTAGCTGGTAGTAACTTGATTCAAA 58.323 34.615 17.24 0.00 40.47 2.69
2739 4763 7.361713 GGCATGATCTAGTTCTACTACTAGCTG 60.362 44.444 0.00 0.00 44.68 4.24
2741 4765 6.657541 AGGCATGATCTAGTTCTACTACTAGC 59.342 42.308 0.00 0.00 44.68 3.42
2743 4767 7.746703 TCAGGCATGATCTAGTTCTACTACTA 58.253 38.462 0.00 0.00 0.00 1.82
2744 4768 6.606069 TCAGGCATGATCTAGTTCTACTACT 58.394 40.000 0.00 0.00 0.00 2.57
2745 4769 6.885952 TCAGGCATGATCTAGTTCTACTAC 57.114 41.667 0.00 0.00 0.00 2.73
2807 4845 1.893315 TCCCCATTAGAACCTCCTGG 58.107 55.000 0.00 0.00 39.83 4.45
2929 5090 0.605083 TTGCTGTGTTTGGTGCAACA 59.395 45.000 0.00 0.00 39.98 3.33
2932 5093 1.180907 TTCTTGCTGTGTTTGGTGCA 58.819 45.000 0.00 0.00 0.00 4.57
2954 5115 2.629617 CCAGTTCACAAGAAGCCCATTT 59.370 45.455 0.00 0.00 33.63 2.32
2958 5119 0.954452 CACCAGTTCACAAGAAGCCC 59.046 55.000 0.00 0.00 33.63 5.19
2959 5120 0.954452 CCACCAGTTCACAAGAAGCC 59.046 55.000 0.00 0.00 33.63 4.35
2960 5121 1.876156 CTCCACCAGTTCACAAGAAGC 59.124 52.381 0.00 0.00 33.63 3.86
2961 5122 3.199880 ACTCCACCAGTTCACAAGAAG 57.800 47.619 0.00 0.00 33.63 2.85
2972 5195 4.641989 CCCATTTCTTGATTACTCCACCAG 59.358 45.833 0.00 0.00 0.00 4.00
2974 5197 4.855340 TCCCATTTCTTGATTACTCCACC 58.145 43.478 0.00 0.00 0.00 4.61
2975 5198 5.221126 GCATCCCATTTCTTGATTACTCCAC 60.221 44.000 0.00 0.00 0.00 4.02
2976 5199 4.889409 GCATCCCATTTCTTGATTACTCCA 59.111 41.667 0.00 0.00 0.00 3.86
2977 5200 4.889409 TGCATCCCATTTCTTGATTACTCC 59.111 41.667 0.00 0.00 0.00 3.85
2978 5201 5.009410 CCTGCATCCCATTTCTTGATTACTC 59.991 44.000 0.00 0.00 0.00 2.59
2979 5202 4.891756 CCTGCATCCCATTTCTTGATTACT 59.108 41.667 0.00 0.00 0.00 2.24
2980 5203 4.500375 GCCTGCATCCCATTTCTTGATTAC 60.500 45.833 0.00 0.00 0.00 1.89
2981 5204 3.638160 GCCTGCATCCCATTTCTTGATTA 59.362 43.478 0.00 0.00 0.00 1.75
2982 5205 2.433239 GCCTGCATCCCATTTCTTGATT 59.567 45.455 0.00 0.00 0.00 2.57
2983 5206 2.037144 GCCTGCATCCCATTTCTTGAT 58.963 47.619 0.00 0.00 0.00 2.57
2984 5207 1.477553 GCCTGCATCCCATTTCTTGA 58.522 50.000 0.00 0.00 0.00 3.02
2985 5208 0.101759 CGCCTGCATCCCATTTCTTG 59.898 55.000 0.00 0.00 0.00 3.02
2986 5209 1.039233 CCGCCTGCATCCCATTTCTT 61.039 55.000 0.00 0.00 0.00 2.52
2987 5210 1.454479 CCGCCTGCATCCCATTTCT 60.454 57.895 0.00 0.00 0.00 2.52
3603 5949 9.846248 AAACAAATGAATGATGAGCTTTAGTAC 57.154 29.630 0.00 0.00 0.00 2.73
3606 5952 7.816031 ACCAAACAAATGAATGATGAGCTTTAG 59.184 33.333 0.00 0.00 0.00 1.85
3607 5953 7.669427 ACCAAACAAATGAATGATGAGCTTTA 58.331 30.769 0.00 0.00 0.00 1.85
3608 5954 6.527423 ACCAAACAAATGAATGATGAGCTTT 58.473 32.000 0.00 0.00 0.00 3.51
3609 5955 6.105397 ACCAAACAAATGAATGATGAGCTT 57.895 33.333 0.00 0.00 0.00 3.74
3610 5956 5.733620 ACCAAACAAATGAATGATGAGCT 57.266 34.783 0.00 0.00 0.00 4.09
3611 5957 6.790285 AAACCAAACAAATGAATGATGAGC 57.210 33.333 0.00 0.00 0.00 4.26
3612 5958 9.480053 AGTTAAACCAAACAAATGAATGATGAG 57.520 29.630 0.00 0.00 0.00 2.90
3613 5959 9.258826 CAGTTAAACCAAACAAATGAATGATGA 57.741 29.630 0.00 0.00 0.00 2.92
3777 6123 9.209175 GAGAAACAAGAAGCTCTTTTACTGATA 57.791 33.333 0.00 0.00 33.78 2.15
3783 6129 6.201044 CGTCAGAGAAACAAGAAGCTCTTTTA 59.799 38.462 0.00 0.00 33.78 1.52
3796 6142 4.523173 ACATTCCTAGACGTCAGAGAAACA 59.477 41.667 19.50 0.00 0.00 2.83
3803 6149 4.169508 CAGTGAACATTCCTAGACGTCAG 58.830 47.826 19.50 12.61 0.00 3.51
3814 6160 2.744202 CTGTAGCCACCAGTGAACATTC 59.256 50.000 0.00 0.00 0.00 2.67
3817 6163 1.070134 GTCTGTAGCCACCAGTGAACA 59.930 52.381 0.00 0.56 0.00 3.18
3818 6164 1.070134 TGTCTGTAGCCACCAGTGAAC 59.930 52.381 0.00 0.00 0.00 3.18
3819 6165 1.344438 CTGTCTGTAGCCACCAGTGAA 59.656 52.381 0.00 0.00 0.00 3.18
3820 6166 0.969149 CTGTCTGTAGCCACCAGTGA 59.031 55.000 0.00 0.00 0.00 3.41
3821 6167 0.969149 TCTGTCTGTAGCCACCAGTG 59.031 55.000 0.00 0.00 0.00 3.66
3822 6168 1.944177 ATCTGTCTGTAGCCACCAGT 58.056 50.000 0.00 0.00 0.00 4.00
3823 6169 3.291584 TCTATCTGTCTGTAGCCACCAG 58.708 50.000 0.00 0.00 0.00 4.00
3860 6207 3.692593 TGTCATGTGATCTCATTGGCTTG 59.307 43.478 7.53 0.00 0.00 4.01
3866 6219 6.412214 TCAACATCTGTCATGTGATCTCATT 58.588 36.000 7.53 0.00 31.80 2.57
3985 6338 9.562408 TCCCGTCATATAAATTTGCTATTGTAA 57.438 29.630 0.00 0.00 0.00 2.41
3986 6339 9.562408 TTCCCGTCATATAAATTTGCTATTGTA 57.438 29.630 0.00 0.00 0.00 2.41
3987 6340 8.458573 TTCCCGTCATATAAATTTGCTATTGT 57.541 30.769 0.00 0.00 0.00 2.71
3988 6341 9.398170 CTTTCCCGTCATATAAATTTGCTATTG 57.602 33.333 0.00 0.00 0.00 1.90
3989 6342 9.131791 ACTTTCCCGTCATATAAATTTGCTATT 57.868 29.630 0.00 0.00 0.00 1.73
3990 6343 8.567948 CACTTTCCCGTCATATAAATTTGCTAT 58.432 33.333 0.00 0.00 0.00 2.97
3991 6344 7.554835 ACACTTTCCCGTCATATAAATTTGCTA 59.445 33.333 0.00 0.00 0.00 3.49
3992 6345 6.377146 ACACTTTCCCGTCATATAAATTTGCT 59.623 34.615 0.00 0.00 0.00 3.91
3993 6346 6.560711 ACACTTTCCCGTCATATAAATTTGC 58.439 36.000 0.00 0.00 0.00 3.68
3996 6349 9.621629 TGAATACACTTTCCCGTCATATAAATT 57.378 29.630 0.00 0.00 0.00 1.82
3997 6350 9.621629 TTGAATACACTTTCCCGTCATATAAAT 57.378 29.630 0.00 0.00 0.00 1.40
3998 6351 9.621629 ATTGAATACACTTTCCCGTCATATAAA 57.378 29.630 0.00 0.00 0.00 1.40
4001 6354 9.793259 ATTATTGAATACACTTTCCCGTCATAT 57.207 29.630 0.00 0.00 0.00 1.78
4002 6355 9.051679 CATTATTGAATACACTTTCCCGTCATA 57.948 33.333 0.00 0.00 0.00 2.15
4003 6356 7.773224 TCATTATTGAATACACTTTCCCGTCAT 59.227 33.333 0.00 0.00 0.00 3.06
4004 6357 7.106890 TCATTATTGAATACACTTTCCCGTCA 58.893 34.615 0.00 0.00 0.00 4.35
4005 6358 7.548196 TCATTATTGAATACACTTTCCCGTC 57.452 36.000 0.00 0.00 0.00 4.79
4006 6359 7.931578 TTCATTATTGAATACACTTTCCCGT 57.068 32.000 0.00 0.00 36.94 5.28
4034 6387 9.729281 AGCCAAATTTTGACAAATCAATATCTT 57.271 25.926 10.72 0.00 44.36 2.40
4035 6388 9.729281 AAGCCAAATTTTGACAAATCAATATCT 57.271 25.926 10.72 0.00 44.36 1.98
4038 6391 9.334947 TCAAAGCCAAATTTTGACAAATCAATA 57.665 25.926 10.72 0.00 44.36 1.90
4039 6392 8.223177 TCAAAGCCAAATTTTGACAAATCAAT 57.777 26.923 10.72 0.00 44.36 2.57
4040 6393 7.621428 TCAAAGCCAAATTTTGACAAATCAA 57.379 28.000 10.72 0.00 43.28 2.57
4080 6433 9.059023 AGTACTCCCTCCATTTTTATTTACTCT 57.941 33.333 0.00 0.00 0.00 3.24
4081 6434 9.682465 AAGTACTCCCTCCATTTTTATTTACTC 57.318 33.333 0.00 0.00 0.00 2.59
4082 6435 9.462606 CAAGTACTCCCTCCATTTTTATTTACT 57.537 33.333 0.00 0.00 0.00 2.24
4083 6436 9.239551 ACAAGTACTCCCTCCATTTTTATTTAC 57.760 33.333 0.00 0.00 0.00 2.01
4084 6437 9.816787 AACAAGTACTCCCTCCATTTTTATTTA 57.183 29.630 0.00 0.00 0.00 1.40
4085 6438 8.585018 CAACAAGTACTCCCTCCATTTTTATTT 58.415 33.333 0.00 0.00 0.00 1.40
4086 6439 7.178451 CCAACAAGTACTCCCTCCATTTTTATT 59.822 37.037 0.00 0.00 0.00 1.40
4087 6440 6.663523 CCAACAAGTACTCCCTCCATTTTTAT 59.336 38.462 0.00 0.00 0.00 1.40
4088 6441 6.007703 CCAACAAGTACTCCCTCCATTTTTA 58.992 40.000 0.00 0.00 0.00 1.52
4089 6442 4.832823 CCAACAAGTACTCCCTCCATTTTT 59.167 41.667 0.00 0.00 0.00 1.94
4090 6443 4.141018 ACCAACAAGTACTCCCTCCATTTT 60.141 41.667 0.00 0.00 0.00 1.82
4091 6444 3.397955 ACCAACAAGTACTCCCTCCATTT 59.602 43.478 0.00 0.00 0.00 2.32
4092 6445 2.986728 ACCAACAAGTACTCCCTCCATT 59.013 45.455 0.00 0.00 0.00 3.16
4093 6446 2.305927 CACCAACAAGTACTCCCTCCAT 59.694 50.000 0.00 0.00 0.00 3.41
4094 6447 1.697432 CACCAACAAGTACTCCCTCCA 59.303 52.381 0.00 0.00 0.00 3.86
4095 6448 1.697982 ACACCAACAAGTACTCCCTCC 59.302 52.381 0.00 0.00 0.00 4.30
4096 6449 3.139077 CAACACCAACAAGTACTCCCTC 58.861 50.000 0.00 0.00 0.00 4.30
4097 6450 2.508300 ACAACACCAACAAGTACTCCCT 59.492 45.455 0.00 0.00 0.00 4.20
4098 6451 2.927028 ACAACACCAACAAGTACTCCC 58.073 47.619 0.00 0.00 0.00 4.30
4099 6452 3.692593 ACAACAACACCAACAAGTACTCC 59.307 43.478 0.00 0.00 0.00 3.85
4100 6453 4.957759 ACAACAACACCAACAAGTACTC 57.042 40.909 0.00 0.00 0.00 2.59
4101 6454 7.254852 CAAATACAACAACACCAACAAGTACT 58.745 34.615 0.00 0.00 0.00 2.73
4102 6455 6.020201 GCAAATACAACAACACCAACAAGTAC 60.020 38.462 0.00 0.00 0.00 2.73
4103 6456 6.037098 GCAAATACAACAACACCAACAAGTA 58.963 36.000 0.00 0.00 0.00 2.24
4104 6457 4.867608 GCAAATACAACAACACCAACAAGT 59.132 37.500 0.00 0.00 0.00 3.16
4105 6458 4.867047 TGCAAATACAACAACACCAACAAG 59.133 37.500 0.00 0.00 0.00 3.16
4106 6459 4.820897 TGCAAATACAACAACACCAACAA 58.179 34.783 0.00 0.00 0.00 2.83
4107 6460 4.456280 TGCAAATACAACAACACCAACA 57.544 36.364 0.00 0.00 0.00 3.33
4108 6461 4.867608 ACTTGCAAATACAACAACACCAAC 59.132 37.500 0.00 0.00 0.00 3.77
4109 6462 4.867047 CACTTGCAAATACAACAACACCAA 59.133 37.500 0.00 0.00 0.00 3.67
4110 6463 4.428209 CACTTGCAAATACAACAACACCA 58.572 39.130 0.00 0.00 0.00 4.17
4111 6464 3.801594 CCACTTGCAAATACAACAACACC 59.198 43.478 0.00 0.00 0.00 4.16
4112 6465 4.429108 ACCACTTGCAAATACAACAACAC 58.571 39.130 0.00 0.00 0.00 3.32
4113 6466 4.727507 ACCACTTGCAAATACAACAACA 57.272 36.364 0.00 0.00 0.00 3.33
4114 6467 6.500041 TCTTACCACTTGCAAATACAACAAC 58.500 36.000 0.00 0.00 0.00 3.32
4115 6468 6.701145 TCTTACCACTTGCAAATACAACAA 57.299 33.333 0.00 0.00 0.00 2.83
4116 6469 6.892658 ATCTTACCACTTGCAAATACAACA 57.107 33.333 0.00 0.00 0.00 3.33
4117 6470 7.367285 TGAATCTTACCACTTGCAAATACAAC 58.633 34.615 0.00 0.00 0.00 3.32
4118 6471 7.230510 ACTGAATCTTACCACTTGCAAATACAA 59.769 33.333 0.00 0.00 0.00 2.41
4119 6472 6.714810 ACTGAATCTTACCACTTGCAAATACA 59.285 34.615 0.00 0.00 0.00 2.29
4120 6473 7.023575 CACTGAATCTTACCACTTGCAAATAC 58.976 38.462 0.00 0.00 0.00 1.89
4121 6474 6.714810 ACACTGAATCTTACCACTTGCAAATA 59.285 34.615 0.00 0.00 0.00 1.40
4122 6475 5.536161 ACACTGAATCTTACCACTTGCAAAT 59.464 36.000 0.00 0.00 0.00 2.32
4123 6476 4.887071 ACACTGAATCTTACCACTTGCAAA 59.113 37.500 0.00 0.00 0.00 3.68
4124 6477 4.275689 CACACTGAATCTTACCACTTGCAA 59.724 41.667 0.00 0.00 0.00 4.08
4125 6478 3.814842 CACACTGAATCTTACCACTTGCA 59.185 43.478 0.00 0.00 0.00 4.08
4126 6479 3.365364 GCACACTGAATCTTACCACTTGC 60.365 47.826 0.00 0.00 0.00 4.01
4127 6480 3.120546 CGCACACTGAATCTTACCACTTG 60.121 47.826 0.00 0.00 0.00 3.16
4128 6481 3.067106 CGCACACTGAATCTTACCACTT 58.933 45.455 0.00 0.00 0.00 3.16
4129 6482 2.037251 ACGCACACTGAATCTTACCACT 59.963 45.455 0.00 0.00 0.00 4.00
4130 6483 2.157668 CACGCACACTGAATCTTACCAC 59.842 50.000 0.00 0.00 0.00 4.16
4131 6484 2.412870 CACGCACACTGAATCTTACCA 58.587 47.619 0.00 0.00 0.00 3.25
4132 6485 1.732259 CCACGCACACTGAATCTTACC 59.268 52.381 0.00 0.00 0.00 2.85
4133 6486 2.157668 CACCACGCACACTGAATCTTAC 59.842 50.000 0.00 0.00 0.00 2.34
4134 6487 2.412870 CACCACGCACACTGAATCTTA 58.587 47.619 0.00 0.00 0.00 2.10
4135 6488 1.229428 CACCACGCACACTGAATCTT 58.771 50.000 0.00 0.00 0.00 2.40
4136 6489 0.603707 CCACCACGCACACTGAATCT 60.604 55.000 0.00 0.00 0.00 2.40
4137 6490 1.577328 CCCACCACGCACACTGAATC 61.577 60.000 0.00 0.00 0.00 2.52
4138 6491 1.600636 CCCACCACGCACACTGAAT 60.601 57.895 0.00 0.00 0.00 2.57
4139 6492 2.203139 CCCACCACGCACACTGAA 60.203 61.111 0.00 0.00 0.00 3.02
4140 6493 4.927782 GCCCACCACGCACACTGA 62.928 66.667 0.00 0.00 0.00 3.41
4141 6494 2.803155 ATAGCCCACCACGCACACTG 62.803 60.000 0.00 0.00 0.00 3.66
4142 6495 1.261938 TATAGCCCACCACGCACACT 61.262 55.000 0.00 0.00 0.00 3.55
4143 6496 0.391927 TTATAGCCCACCACGCACAC 60.392 55.000 0.00 0.00 0.00 3.82
4144 6497 0.544223 ATTATAGCCCACCACGCACA 59.456 50.000 0.00 0.00 0.00 4.57
4145 6498 1.226746 GATTATAGCCCACCACGCAC 58.773 55.000 0.00 0.00 0.00 5.34
4146 6499 0.833949 TGATTATAGCCCACCACGCA 59.166 50.000 0.00 0.00 0.00 5.24
4147 6500 1.961793 TTGATTATAGCCCACCACGC 58.038 50.000 0.00 0.00 0.00 5.34
4148 6501 5.547465 TCTAATTGATTATAGCCCACCACG 58.453 41.667 0.00 0.00 0.00 4.94
4149 6502 6.769512 TCTCTAATTGATTATAGCCCACCAC 58.230 40.000 0.00 0.00 0.00 4.16
4150 6503 7.072454 ACTTCTCTAATTGATTATAGCCCACCA 59.928 37.037 0.00 0.00 0.00 4.17
4151 6504 7.454225 ACTTCTCTAATTGATTATAGCCCACC 58.546 38.462 0.00 0.00 0.00 4.61
4152 6505 9.998106 TTACTTCTCTAATTGATTATAGCCCAC 57.002 33.333 0.00 0.00 0.00 4.61
4163 6516 9.847224 AAACCAGACTTTTACTTCTCTAATTGA 57.153 29.630 0.00 0.00 0.00 2.57
4175 6528 8.658499 TGAGAGAAGTAAAACCAGACTTTTAC 57.342 34.615 6.48 6.48 42.94 2.01
4176 6529 7.931948 CCTGAGAGAAGTAAAACCAGACTTTTA 59.068 37.037 0.00 0.00 36.04 1.52
4177 6530 6.768381 CCTGAGAGAAGTAAAACCAGACTTTT 59.232 38.462 0.00 0.00 36.04 2.27
4178 6531 6.099845 TCCTGAGAGAAGTAAAACCAGACTTT 59.900 38.462 0.00 0.00 36.04 2.66
4179 6532 5.602978 TCCTGAGAGAAGTAAAACCAGACTT 59.397 40.000 0.00 0.00 38.60 3.01
4180 6533 5.011227 GTCCTGAGAGAAGTAAAACCAGACT 59.989 44.000 0.00 0.00 0.00 3.24
4181 6534 5.231702 GTCCTGAGAGAAGTAAAACCAGAC 58.768 45.833 0.00 0.00 0.00 3.51
4182 6535 4.283722 GGTCCTGAGAGAAGTAAAACCAGA 59.716 45.833 0.00 0.00 0.00 3.86
4183 6536 4.284746 AGGTCCTGAGAGAAGTAAAACCAG 59.715 45.833 0.00 0.00 0.00 4.00
4184 6537 4.232091 AGGTCCTGAGAGAAGTAAAACCA 58.768 43.478 0.00 0.00 0.00 3.67
4185 6538 4.893829 AGGTCCTGAGAGAAGTAAAACC 57.106 45.455 0.00 0.00 0.00 3.27
4186 6539 5.412640 GCTAGGTCCTGAGAGAAGTAAAAC 58.587 45.833 0.00 0.00 0.00 2.43
4187 6540 4.466726 GGCTAGGTCCTGAGAGAAGTAAAA 59.533 45.833 0.00 0.00 0.00 1.52
4188 6541 4.024670 GGCTAGGTCCTGAGAGAAGTAAA 58.975 47.826 0.00 0.00 0.00 2.01
4189 6542 3.633418 GGCTAGGTCCTGAGAGAAGTAA 58.367 50.000 0.00 0.00 0.00 2.24
4190 6543 2.421670 CGGCTAGGTCCTGAGAGAAGTA 60.422 54.545 0.00 0.00 0.00 2.24
4191 6544 1.683629 CGGCTAGGTCCTGAGAGAAGT 60.684 57.143 0.00 0.00 0.00 3.01
4192 6545 1.028905 CGGCTAGGTCCTGAGAGAAG 58.971 60.000 0.00 0.00 0.00 2.85
4193 6546 0.624254 TCGGCTAGGTCCTGAGAGAA 59.376 55.000 0.00 0.00 0.00 2.87
4194 6547 0.624254 TTCGGCTAGGTCCTGAGAGA 59.376 55.000 0.00 0.00 0.00 3.10
4195 6548 0.741915 GTTCGGCTAGGTCCTGAGAG 59.258 60.000 0.00 0.00 0.00 3.20
4196 6549 0.683504 GGTTCGGCTAGGTCCTGAGA 60.684 60.000 0.00 0.00 0.00 3.27
4197 6550 1.677637 GGGTTCGGCTAGGTCCTGAG 61.678 65.000 0.00 0.00 0.00 3.35
4198 6551 1.684734 GGGTTCGGCTAGGTCCTGA 60.685 63.158 0.00 0.00 0.00 3.86
4199 6552 1.265454 AAGGGTTCGGCTAGGTCCTG 61.265 60.000 0.00 0.00 0.00 3.86
4200 6553 0.337428 TAAGGGTTCGGCTAGGTCCT 59.663 55.000 0.00 0.00 0.00 3.85
4201 6554 1.197812 TTAAGGGTTCGGCTAGGTCC 58.802 55.000 0.00 0.00 0.00 4.46
4202 6555 3.339253 TTTTAAGGGTTCGGCTAGGTC 57.661 47.619 0.00 0.00 0.00 3.85
4203 6556 3.680754 CGATTTTAAGGGTTCGGCTAGGT 60.681 47.826 0.00 0.00 0.00 3.08
4204 6557 2.870411 CGATTTTAAGGGTTCGGCTAGG 59.130 50.000 0.00 0.00 0.00 3.02
4205 6558 3.528532 ACGATTTTAAGGGTTCGGCTAG 58.471 45.455 0.00 0.00 35.98 3.42
4206 6559 3.615224 ACGATTTTAAGGGTTCGGCTA 57.385 42.857 0.00 0.00 35.98 3.93
4207 6560 2.484742 ACGATTTTAAGGGTTCGGCT 57.515 45.000 0.00 0.00 35.98 5.52
4208 6561 3.934579 TCTAACGATTTTAAGGGTTCGGC 59.065 43.478 0.00 0.00 35.98 5.54
4209 6562 5.173664 ACTCTAACGATTTTAAGGGTTCGG 58.826 41.667 0.00 0.00 35.98 4.30
4210 6563 6.808212 TGTACTCTAACGATTTTAAGGGTTCG 59.192 38.462 0.00 0.00 37.60 3.95
4211 6564 8.538409 TTGTACTCTAACGATTTTAAGGGTTC 57.462 34.615 0.00 0.00 0.00 3.62
4212 6565 9.511272 AATTGTACTCTAACGATTTTAAGGGTT 57.489 29.630 0.00 0.00 30.71 4.11
4213 6566 9.511272 AAATTGTACTCTAACGATTTTAAGGGT 57.489 29.630 0.00 0.00 39.41 4.34
4223 6576 9.745880 GATGAAGGATAAATTGTACTCTAACGA 57.254 33.333 0.00 0.00 0.00 3.85
4224 6577 8.691727 CGATGAAGGATAAATTGTACTCTAACG 58.308 37.037 0.00 0.00 0.00 3.18
4225 6578 8.488764 GCGATGAAGGATAAATTGTACTCTAAC 58.511 37.037 0.00 0.00 0.00 2.34
4226 6579 8.421784 AGCGATGAAGGATAAATTGTACTCTAA 58.578 33.333 0.00 0.00 0.00 2.10
4227 6580 7.952671 AGCGATGAAGGATAAATTGTACTCTA 58.047 34.615 0.00 0.00 0.00 2.43
4228 6581 6.821388 AGCGATGAAGGATAAATTGTACTCT 58.179 36.000 0.00 0.00 0.00 3.24
4229 6582 7.484035 AAGCGATGAAGGATAAATTGTACTC 57.516 36.000 0.00 0.00 0.00 2.59
4230 6583 9.209175 GATAAGCGATGAAGGATAAATTGTACT 57.791 33.333 0.00 0.00 0.00 2.73
4231 6584 8.443937 GGATAAGCGATGAAGGATAAATTGTAC 58.556 37.037 0.00 0.00 0.00 2.90
4232 6585 7.606456 GGGATAAGCGATGAAGGATAAATTGTA 59.394 37.037 0.00 0.00 0.00 2.41
4233 6586 6.431234 GGGATAAGCGATGAAGGATAAATTGT 59.569 38.462 0.00 0.00 0.00 2.71
4234 6587 6.402550 CGGGATAAGCGATGAAGGATAAATTG 60.403 42.308 0.00 0.00 0.00 2.32
4235 6588 5.643777 CGGGATAAGCGATGAAGGATAAATT 59.356 40.000 0.00 0.00 0.00 1.82
4236 6589 5.178797 CGGGATAAGCGATGAAGGATAAAT 58.821 41.667 0.00 0.00 0.00 1.40
4237 6590 4.566004 CGGGATAAGCGATGAAGGATAAA 58.434 43.478 0.00 0.00 0.00 1.40
4238 6591 3.616560 GCGGGATAAGCGATGAAGGATAA 60.617 47.826 0.00 0.00 0.00 1.75
4239 6592 2.094182 GCGGGATAAGCGATGAAGGATA 60.094 50.000 0.00 0.00 0.00 2.59
4240 6593 1.338200 GCGGGATAAGCGATGAAGGAT 60.338 52.381 0.00 0.00 0.00 3.24
4241 6594 0.033504 GCGGGATAAGCGATGAAGGA 59.966 55.000 0.00 0.00 0.00 3.36
4242 6595 0.249868 TGCGGGATAAGCGATGAAGG 60.250 55.000 0.00 0.00 37.44 3.46
4243 6596 0.861837 GTGCGGGATAAGCGATGAAG 59.138 55.000 0.00 0.00 37.44 3.02
4244 6597 0.176910 TGTGCGGGATAAGCGATGAA 59.823 50.000 0.00 0.00 37.44 2.57
4245 6598 0.392706 ATGTGCGGGATAAGCGATGA 59.607 50.000 0.00 0.00 37.44 2.92
4246 6599 2.078849 TATGTGCGGGATAAGCGATG 57.921 50.000 0.00 0.00 37.44 3.84
4247 6600 2.028112 ACATATGTGCGGGATAAGCGAT 60.028 45.455 7.78 0.00 37.44 4.58
4248 6601 1.343142 ACATATGTGCGGGATAAGCGA 59.657 47.619 7.78 0.00 37.44 4.93
4249 6602 1.795768 ACATATGTGCGGGATAAGCG 58.204 50.000 7.78 0.00 37.44 4.68
4250 6603 3.926616 AGTACATATGTGCGGGATAAGC 58.073 45.455 18.81 0.00 35.74 3.09
4251 6604 4.021456 TGGAGTACATATGTGCGGGATAAG 60.021 45.833 18.81 0.00 35.74 1.73
4252 6605 3.898741 TGGAGTACATATGTGCGGGATAA 59.101 43.478 18.81 0.39 35.74 1.75
4253 6606 3.257375 GTGGAGTACATATGTGCGGGATA 59.743 47.826 18.81 2.51 35.74 2.59
4254 6607 2.037251 GTGGAGTACATATGTGCGGGAT 59.963 50.000 18.81 0.69 35.74 3.85
4255 6608 1.411246 GTGGAGTACATATGTGCGGGA 59.589 52.381 18.81 3.44 35.74 5.14
4256 6609 1.540363 GGTGGAGTACATATGTGCGGG 60.540 57.143 18.81 0.00 35.74 6.13
4257 6610 1.865865 GGTGGAGTACATATGTGCGG 58.134 55.000 18.81 0.00 35.74 5.69
4258 6611 1.487482 CGGTGGAGTACATATGTGCG 58.513 55.000 18.81 0.00 35.74 5.34
4259 6612 1.202533 AGCGGTGGAGTACATATGTGC 60.203 52.381 18.81 17.04 0.00 4.57
4260 6613 2.100749 TGAGCGGTGGAGTACATATGTG 59.899 50.000 18.81 0.00 0.00 3.21
4261 6614 2.384828 TGAGCGGTGGAGTACATATGT 58.615 47.619 13.93 13.93 0.00 2.29
4262 6615 3.452755 TTGAGCGGTGGAGTACATATG 57.547 47.619 0.00 0.00 0.00 1.78
4263 6616 3.641436 TCATTGAGCGGTGGAGTACATAT 59.359 43.478 0.00 0.00 0.00 1.78
4264 6617 3.028130 TCATTGAGCGGTGGAGTACATA 58.972 45.455 0.00 0.00 0.00 2.29
4265 6618 1.831106 TCATTGAGCGGTGGAGTACAT 59.169 47.619 0.00 0.00 0.00 2.29
4266 6619 1.067142 GTCATTGAGCGGTGGAGTACA 60.067 52.381 0.00 0.00 0.00 2.90
4267 6620 1.067142 TGTCATTGAGCGGTGGAGTAC 60.067 52.381 0.00 0.00 0.00 2.73
4268 6621 1.262417 TGTCATTGAGCGGTGGAGTA 58.738 50.000 0.00 0.00 0.00 2.59
4269 6622 0.615331 ATGTCATTGAGCGGTGGAGT 59.385 50.000 0.00 0.00 0.00 3.85
4270 6623 2.159043 ACTATGTCATTGAGCGGTGGAG 60.159 50.000 0.00 0.00 0.00 3.86
4271 6624 1.831106 ACTATGTCATTGAGCGGTGGA 59.169 47.619 0.00 0.00 0.00 4.02
4272 6625 2.315925 ACTATGTCATTGAGCGGTGG 57.684 50.000 0.00 0.00 0.00 4.61
4273 6626 5.794687 TTTTACTATGTCATTGAGCGGTG 57.205 39.130 0.00 0.00 0.00 4.94
4295 6648 3.204382 TGGGAGAGAAGGGTGAAGTTTTT 59.796 43.478 0.00 0.00 0.00 1.94
4296 6649 2.783510 TGGGAGAGAAGGGTGAAGTTTT 59.216 45.455 0.00 0.00 0.00 2.43
4297 6650 2.106684 GTGGGAGAGAAGGGTGAAGTTT 59.893 50.000 0.00 0.00 0.00 2.66
4298 6651 1.700186 GTGGGAGAGAAGGGTGAAGTT 59.300 52.381 0.00 0.00 0.00 2.66
4299 6652 1.132689 AGTGGGAGAGAAGGGTGAAGT 60.133 52.381 0.00 0.00 0.00 3.01
4300 6653 1.650528 AGTGGGAGAGAAGGGTGAAG 58.349 55.000 0.00 0.00 0.00 3.02
4301 6654 1.699634 CAAGTGGGAGAGAAGGGTGAA 59.300 52.381 0.00 0.00 0.00 3.18
4302 6655 1.352083 CAAGTGGGAGAGAAGGGTGA 58.648 55.000 0.00 0.00 0.00 4.02
4303 6656 1.002544 GACAAGTGGGAGAGAAGGGTG 59.997 57.143 0.00 0.00 0.00 4.61
4304 6657 1.353091 GACAAGTGGGAGAGAAGGGT 58.647 55.000 0.00 0.00 0.00 4.34
4305 6658 0.615850 GGACAAGTGGGAGAGAAGGG 59.384 60.000 0.00 0.00 0.00 3.95
4306 6659 1.552792 GAGGACAAGTGGGAGAGAAGG 59.447 57.143 0.00 0.00 0.00 3.46
4307 6660 1.552792 GGAGGACAAGTGGGAGAGAAG 59.447 57.143 0.00 0.00 0.00 2.85
4308 6661 1.645710 GGAGGACAAGTGGGAGAGAA 58.354 55.000 0.00 0.00 0.00 2.87
4309 6662 0.252284 GGGAGGACAAGTGGGAGAGA 60.252 60.000 0.00 0.00 0.00 3.10
4310 6663 1.268283 GGGGAGGACAAGTGGGAGAG 61.268 65.000 0.00 0.00 0.00 3.20
4311 6664 1.229529 GGGGAGGACAAGTGGGAGA 60.230 63.158 0.00 0.00 0.00 3.71
4312 6665 1.133809 TTGGGGAGGACAAGTGGGAG 61.134 60.000 0.00 0.00 0.00 4.30
4313 6666 0.699577 TTTGGGGAGGACAAGTGGGA 60.700 55.000 0.00 0.00 0.00 4.37
4314 6667 0.539669 GTTTGGGGAGGACAAGTGGG 60.540 60.000 0.00 0.00 0.00 4.61
4315 6668 0.539669 GGTTTGGGGAGGACAAGTGG 60.540 60.000 0.00 0.00 0.00 4.00
4316 6669 0.539669 GGGTTTGGGGAGGACAAGTG 60.540 60.000 0.00 0.00 0.00 3.16
4317 6670 1.726192 GGGGTTTGGGGAGGACAAGT 61.726 60.000 0.00 0.00 0.00 3.16
4318 6671 1.076727 GGGGTTTGGGGAGGACAAG 59.923 63.158 0.00 0.00 0.00 3.16
4319 6672 2.836187 CGGGGTTTGGGGAGGACAA 61.836 63.158 0.00 0.00 0.00 3.18
4320 6673 3.253838 CGGGGTTTGGGGAGGACA 61.254 66.667 0.00 0.00 0.00 4.02
4321 6674 4.735358 GCGGGGTTTGGGGAGGAC 62.735 72.222 0.00 0.00 0.00 3.85
4322 6675 4.995058 AGCGGGGTTTGGGGAGGA 62.995 66.667 0.00 0.00 0.00 3.71
4323 6676 4.740822 CAGCGGGGTTTGGGGAGG 62.741 72.222 0.00 0.00 0.00 4.30
4324 6677 3.920093 GACAGCGGGGTTTGGGGAG 62.920 68.421 0.00 0.00 0.00 4.30
4325 6678 3.961414 GACAGCGGGGTTTGGGGA 61.961 66.667 0.00 0.00 0.00 4.81
4337 6690 2.956964 CGAGGATTCGCCGACAGC 60.957 66.667 0.00 0.00 43.43 4.40
4346 6699 4.237207 GGGGGACGGCGAGGATTC 62.237 72.222 16.62 0.00 0.00 2.52
4357 6710 3.159347 ATTAGGGCGACGGGGGAC 61.159 66.667 0.00 0.00 0.00 4.46
4358 6711 3.158648 CATTAGGGCGACGGGGGA 61.159 66.667 0.00 0.00 0.00 4.81
4359 6712 4.250305 CCATTAGGGCGACGGGGG 62.250 72.222 0.00 0.00 0.00 5.40
4368 6721 2.757077 GGGATCCGGCCATTAGGG 59.243 66.667 5.45 0.00 40.85 3.53
4369 6722 2.347490 CGGGATCCGGCCATTAGG 59.653 66.667 5.45 0.00 44.15 2.69
4379 6732 0.745468 GACTAGTGGACACGGGATCC 59.255 60.000 1.92 1.92 36.70 3.36
4380 6733 0.745468 GGACTAGTGGACACGGGATC 59.255 60.000 0.00 0.00 36.20 3.36
4381 6734 0.686769 GGGACTAGTGGACACGGGAT 60.687 60.000 0.00 0.00 36.20 3.85
4382 6735 1.304713 GGGACTAGTGGACACGGGA 60.305 63.158 0.00 0.00 36.20 5.14
4383 6736 2.356780 GGGGACTAGTGGACACGGG 61.357 68.421 0.00 0.00 36.20 5.28
4384 6737 2.707849 CGGGGACTAGTGGACACGG 61.708 68.421 0.00 0.00 36.20 4.94
4385 6738 2.882876 CGGGGACTAGTGGACACG 59.117 66.667 0.00 0.00 36.20 4.49
4386 6739 2.577593 GCGGGGACTAGTGGACAC 59.422 66.667 0.00 0.00 0.00 3.67
4387 6740 2.682494 GGCGGGGACTAGTGGACA 60.682 66.667 0.00 0.00 0.00 4.02
4388 6741 3.834799 CGGCGGGGACTAGTGGAC 61.835 72.222 0.00 0.00 0.00 4.02
4408 6761 4.520846 GGATCCGCGCTGCAAACG 62.521 66.667 5.56 4.50 0.00 3.60
4409 6762 3.430862 TGGATCCGCGCTGCAAAC 61.431 61.111 7.39 0.00 0.00 2.93
4410 6763 3.430862 GTGGATCCGCGCTGCAAA 61.431 61.111 10.09 0.00 0.00 3.68
4421 6774 3.499737 CTTGTGGCGGCGTGGATC 61.500 66.667 9.37 0.00 0.00 3.36
4427 6780 4.980903 GTTGTGCTTGTGGCGGCG 62.981 66.667 0.51 0.51 45.43 6.46
4428 6781 3.898509 TGTTGTGCTTGTGGCGGC 61.899 61.111 0.00 0.00 45.43 6.53
4429 6782 2.026014 GTGTTGTGCTTGTGGCGG 59.974 61.111 0.00 0.00 45.43 6.13
4430 6783 2.352229 CGTGTTGTGCTTGTGGCG 60.352 61.111 0.00 0.00 45.43 5.69
4431 6784 1.795170 ATCCGTGTTGTGCTTGTGGC 61.795 55.000 0.00 0.00 42.22 5.01
4432 6785 0.040157 CATCCGTGTTGTGCTTGTGG 60.040 55.000 0.00 0.00 0.00 4.17
4433 6786 0.661187 GCATCCGTGTTGTGCTTGTG 60.661 55.000 0.00 0.00 36.02 3.33
4434 6787 1.654220 GCATCCGTGTTGTGCTTGT 59.346 52.632 0.00 0.00 36.02 3.16
4435 6788 1.440850 CGCATCCGTGTTGTGCTTG 60.441 57.895 0.00 0.00 36.74 4.01
4436 6789 2.945984 CGCATCCGTGTTGTGCTT 59.054 55.556 0.00 0.00 36.74 3.91
4474 6827 0.104671 CCAAAGGGGTTGCAGTGTTG 59.895 55.000 0.00 0.00 35.74 3.33
4475 6828 2.515288 CCAAAGGGGTTGCAGTGTT 58.485 52.632 0.00 0.00 35.74 3.32
4476 6829 4.275781 CCAAAGGGGTTGCAGTGT 57.724 55.556 0.00 0.00 35.74 3.55
4487 6840 1.901464 CCGACCAACCCACCAAAGG 60.901 63.158 0.00 0.00 0.00 3.11
4488 6841 2.561037 GCCGACCAACCCACCAAAG 61.561 63.158 0.00 0.00 0.00 2.77
4489 6842 2.519780 GCCGACCAACCCACCAAA 60.520 61.111 0.00 0.00 0.00 3.28
4490 6843 3.063197 AAGCCGACCAACCCACCAA 62.063 57.895 0.00 0.00 0.00 3.67
4491 6844 3.494254 AAGCCGACCAACCCACCA 61.494 61.111 0.00 0.00 0.00 4.17
4492 6845 2.983592 CAAGCCGACCAACCCACC 60.984 66.667 0.00 0.00 0.00 4.61
4493 6846 3.670377 GCAAGCCGACCAACCCAC 61.670 66.667 0.00 0.00 0.00 4.61
4494 6847 3.429372 AAGCAAGCCGACCAACCCA 62.429 57.895 0.00 0.00 0.00 4.51
4495 6848 2.597510 AAGCAAGCCGACCAACCC 60.598 61.111 0.00 0.00 0.00 4.11
4496 6849 2.644992 CAAGCAAGCCGACCAACC 59.355 61.111 0.00 0.00 0.00 3.77
4497 6850 2.050077 GCAAGCAAGCCGACCAAC 60.050 61.111 0.00 0.00 0.00 3.77
4498 6851 3.294493 GGCAAGCAAGCCGACCAA 61.294 61.111 3.54 0.00 46.12 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.