Multiple sequence alignment - TraesCS6B01G323500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G323500 chr6B 100.000 6746 0 0 1 6746 572400407 572407152 0.000000e+00 12458.0
1 TraesCS6B01G323500 chr6D 94.321 1796 78 15 4073 5856 382624166 382625949 0.000000e+00 2730.0
2 TraesCS6B01G323500 chr6D 95.460 1608 55 8 2396 3988 382622560 382624164 0.000000e+00 2549.0
3 TraesCS6B01G323500 chr6D 92.791 971 43 8 1447 2404 382621253 382622209 0.000000e+00 1380.0
4 TraesCS6B01G323500 chr6D 89.467 769 35 6 5938 6680 382626130 382626878 0.000000e+00 929.0
5 TraesCS6B01G323500 chr6D 85.255 746 46 23 714 1410 382620527 382621257 0.000000e+00 710.0
6 TraesCS6B01G323500 chr6D 91.071 392 28 6 60 448 382620140 382620527 2.160000e-144 523.0
7 TraesCS6B01G323500 chr6D 84.825 257 27 2 438 682 24479822 24480078 1.450000e-61 248.0
8 TraesCS6B01G323500 chr6D 91.000 100 7 2 3981 4079 139569724 139569822 4.240000e-27 134.0
9 TraesCS6B01G323500 chr6D 74.129 402 60 22 50 431 418225456 418225833 7.100000e-25 126.0
10 TraesCS6B01G323500 chr6D 96.923 65 2 0 6682 6746 382626845 382626909 7.150000e-20 110.0
11 TraesCS6B01G323500 chr6D 79.070 129 12 8 580 695 239254539 239254413 2.610000e-09 75.0
12 TraesCS6B01G323500 chr6D 84.722 72 8 3 625 695 144189647 144189578 1.210000e-07 69.4
13 TraesCS6B01G323500 chr6D 77.519 129 14 7 580 695 146757999 146758125 5.650000e-06 63.9
14 TraesCS6B01G323500 chr6D 83.333 72 9 3 625 695 243055809 243055878 5.650000e-06 63.9
15 TraesCS6B01G323500 chr6D 83.333 72 9 3 625 695 272401097 272401028 5.650000e-06 63.9
16 TraesCS6B01G323500 chr6D 83.333 72 9 3 625 695 326120642 326120711 5.650000e-06 63.9
17 TraesCS6B01G323500 chr6A 94.851 1612 61 12 2396 3989 524765133 524766740 0.000000e+00 2497.0
18 TraesCS6B01G323500 chr6A 94.451 1622 71 14 4071 5682 524766739 524768351 0.000000e+00 2479.0
19 TraesCS6B01G323500 chr6A 90.130 1540 85 26 887 2404 524763311 524764805 0.000000e+00 1940.0
20 TraesCS6B01G323500 chr6A 91.066 694 46 6 6056 6746 524768882 524769562 0.000000e+00 924.0
21 TraesCS6B01G323500 chr6A 87.399 373 20 5 1 372 524762102 524762448 2.930000e-108 403.0
22 TraesCS6B01G323500 chr6A 94.891 137 7 0 5923 6059 524768721 524768857 1.470000e-51 215.0
23 TraesCS6B01G323500 chr6A 95.455 88 4 0 5775 5862 524768352 524768439 2.540000e-29 141.0
24 TraesCS6B01G323500 chr1D 81.272 1132 140 32 4616 5709 112353680 112354777 0.000000e+00 850.0
25 TraesCS6B01G323500 chr1D 87.812 722 67 12 1680 2389 112351321 112352033 0.000000e+00 826.0
26 TraesCS6B01G323500 chr1D 90.463 367 28 5 3629 3989 112353157 112353522 1.700000e-130 477.0
27 TraesCS6B01G323500 chr1D 83.066 437 39 17 3052 3475 112352662 112353076 1.380000e-96 364.0
28 TraesCS6B01G323500 chr1D 86.475 244 21 4 451 682 44310218 44309975 2.410000e-64 257.0
29 TraesCS6B01G323500 chr1D 85.600 250 22 5 451 686 44275020 44274771 4.040000e-62 250.0
30 TraesCS6B01G323500 chr1D 89.683 126 7 6 4071 4195 112353521 112353641 9.060000e-34 156.0
31 TraesCS6B01G323500 chr1D 90.722 97 9 0 3979 4075 104427161 104427257 5.490000e-26 130.0
32 TraesCS6B01G323500 chr1D 83.051 118 19 1 515 632 274481389 274481505 9.250000e-19 106.0
33 TraesCS6B01G323500 chr1B 87.821 739 73 11 1680 2410 171617321 171618050 0.000000e+00 850.0
34 TraesCS6B01G323500 chr1B 81.861 1053 135 23 4616 5635 171619508 171620537 0.000000e+00 835.0
35 TraesCS6B01G323500 chr1B 90.685 365 27 5 3629 3989 171618988 171619349 4.730000e-131 479.0
36 TraesCS6B01G323500 chr1B 83.066 437 39 17 3052 3475 171618493 171618907 1.380000e-96 364.0
37 TraesCS6B01G323500 chr1B 91.597 119 7 3 4071 4189 171619348 171619463 1.950000e-35 161.0
38 TraesCS6B01G323500 chr1A 87.534 746 69 12 1680 2410 119493673 119494409 0.000000e+00 841.0
39 TraesCS6B01G323500 chr1A 82.146 997 132 20 4748 5709 119495937 119496922 0.000000e+00 813.0
40 TraesCS6B01G323500 chr1A 89.373 367 28 7 3633 3989 119495345 119495710 1.030000e-122 451.0
41 TraesCS6B01G323500 chr1A 82.439 410 37 17 3052 3448 119494850 119495237 6.520000e-85 326.0
42 TraesCS6B01G323500 chr1A 91.597 119 8 2 4071 4189 119495709 119495825 5.410000e-36 163.0
43 TraesCS6B01G323500 chr7D 80.505 436 51 16 3 434 224482254 224481849 3.060000e-78 303.0
44 TraesCS6B01G323500 chr7D 80.542 406 50 18 31 431 388716904 388716523 1.110000e-72 285.0
45 TraesCS6B01G323500 chr7D 87.190 242 19 2 453 682 550979718 550979959 1.440000e-66 265.0
46 TraesCS6B01G323500 chr7D 76.623 385 52 16 8 373 370192407 370192772 1.930000e-40 178.0
47 TraesCS6B01G323500 chr2D 80.000 430 59 17 8 431 12924708 12924300 6.620000e-75 292.0
48 TraesCS6B01G323500 chr2D 83.489 321 39 12 26 342 390901842 390901532 3.080000e-73 287.0
49 TraesCS6B01G323500 chr2D 87.805 246 18 2 449 682 371841381 371841136 1.850000e-70 278.0
50 TraesCS6B01G323500 chr2D 87.395 119 12 2 565 682 372943291 372943407 4.240000e-27 134.0
51 TraesCS6B01G323500 chr2D 91.753 97 7 1 3983 4079 651527881 651527786 4.240000e-27 134.0
52 TraesCS6B01G323500 chr4D 87.603 242 18 3 453 682 329463613 329463372 3.100000e-68 270.0
53 TraesCS6B01G323500 chr4D 77.519 129 14 7 580 695 122105176 122105302 5.650000e-06 63.9
54 TraesCS6B01G323500 chr4D 83.333 72 9 3 625 695 194074720 194074651 5.650000e-06 63.9
55 TraesCS6B01G323500 chr3D 92.179 179 14 0 450 628 385703179 385703001 3.120000e-63 254.0
56 TraesCS6B01G323500 chr3D 85.200 250 23 3 453 688 382108336 382108087 1.880000e-60 244.0
57 TraesCS6B01G323500 chr3D 92.473 93 7 0 3980 4072 607079119 607079211 4.240000e-27 134.0
58 TraesCS6B01G323500 chr3D 91.429 70 5 1 54 123 68437866 68437934 2.000000e-15 95.3
59 TraesCS6B01G323500 chr7A 85.772 246 23 3 449 682 547571711 547571466 4.040000e-62 250.0
60 TraesCS6B01G323500 chr7A 77.015 335 46 9 54 373 409864364 409864046 5.410000e-36 163.0
61 TraesCS6B01G323500 chr5B 83.511 188 25 5 233 419 388730410 388730228 3.230000e-38 171.0
62 TraesCS6B01G323500 chr5B 92.632 95 7 0 3988 4082 73990254 73990160 3.280000e-28 137.0
63 TraesCS6B01G323500 chr5B 88.462 104 11 1 3977 4079 97297032 97296929 2.550000e-24 124.0
64 TraesCS6B01G323500 chr7B 77.151 337 44 10 54 373 317243166 317243486 1.510000e-36 165.0
65 TraesCS6B01G323500 chr3B 92.553 94 7 0 3982 4075 623657558 623657651 1.180000e-27 135.0
66 TraesCS6B01G323500 chr3B 92.473 93 6 1 3983 4075 427633732 427633823 1.530000e-26 132.0
67 TraesCS6B01G323500 chr5D 90.291 103 9 1 3975 4077 367998074 367998175 4.240000e-27 134.0
68 TraesCS6B01G323500 chr4A 82.524 103 16 2 8 109 600688028 600688129 9.320000e-14 89.8
69 TraesCS6B01G323500 chr3A 95.238 42 1 1 50 91 610059373 610059333 1.570000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G323500 chr6B 572400407 572407152 6745 False 12458.000000 12458 100.000000 1 6746 1 chr6B.!!$F1 6745
1 TraesCS6B01G323500 chr6D 382620140 382626909 6769 False 1275.857143 2730 92.184000 60 6746 7 chr6D.!!$F7 6686
2 TraesCS6B01G323500 chr6A 524762102 524769562 7460 False 1228.428571 2497 92.606143 1 6746 7 chr6A.!!$F1 6745
3 TraesCS6B01G323500 chr1D 112351321 112354777 3456 False 534.600000 850 86.459200 1680 5709 5 chr1D.!!$F3 4029
4 TraesCS6B01G323500 chr1B 171617321 171620537 3216 False 537.800000 850 87.006000 1680 5635 5 chr1B.!!$F1 3955
5 TraesCS6B01G323500 chr1A 119493673 119496922 3249 False 518.800000 841 86.617800 1680 5709 5 chr1A.!!$F1 4029

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
768 1433 0.394899 CTGGGGCCTGATTCTTGGAC 60.395 60.000 0.84 0.0 0.00 4.02 F
1415 2162 0.107263 TGTGGCATGTGTGTCAGTGT 60.107 50.000 0.00 0.0 41.38 3.55 F
1416 2163 0.308684 GTGGCATGTGTGTCAGTGTG 59.691 55.000 0.00 0.0 41.38 3.82 F
1419 2166 0.308684 GCATGTGTGTCAGTGTGTGG 59.691 55.000 0.00 0.0 0.00 4.17 F
2999 4315 0.102844 TGCCACAGCTTGTTTCAAGC 59.897 50.000 21.90 21.9 43.31 4.01 F
3903 5268 1.556911 TCAGCTGAAGGGATGGAGTTC 59.443 52.381 15.67 0.0 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1649 2398 1.065410 TTGGCCTTCCTTCTGGGTGA 61.065 55.000 3.32 0.0 36.25 4.02 R
2272 3055 1.066143 ACCTCCCTGCATTAACACTCG 60.066 52.381 0.00 0.0 0.00 4.18 R
2963 4279 1.159285 GCACTATGTCTGCTTGCACA 58.841 50.000 0.00 0.0 33.24 4.57 R
3050 4366 5.837437 ACGTTGGCATGAGTTTTATTGAAA 58.163 33.333 0.00 0.0 0.00 2.69 R
4005 5378 0.031994 GGCCAAAACACGTCTTGCAT 59.968 50.000 0.00 0.0 0.00 3.96 R
5747 7171 0.610232 CAAGCCCAACCTTCTCAGGG 60.610 60.000 0.00 0.0 46.01 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
145 166 5.357257 AGCGTCTAAGAACTTGAGTTTCAA 58.643 37.500 0.00 0.00 38.56 2.69
187 209 5.656416 TGACAAAAATGAGAAGGGACAACTT 59.344 36.000 0.00 0.00 0.00 2.66
450 1115 2.447244 CAGTTCGCTGGAGTTTCTCT 57.553 50.000 0.00 0.00 41.40 3.10
451 1116 2.760374 CAGTTCGCTGGAGTTTCTCTT 58.240 47.619 0.00 0.00 41.40 2.85
452 1117 3.914312 CAGTTCGCTGGAGTTTCTCTTA 58.086 45.455 0.00 0.00 41.40 2.10
453 1118 3.923461 CAGTTCGCTGGAGTTTCTCTTAG 59.077 47.826 0.00 0.00 41.40 2.18
454 1119 3.827302 AGTTCGCTGGAGTTTCTCTTAGA 59.173 43.478 0.00 0.00 0.00 2.10
455 1120 3.851976 TCGCTGGAGTTTCTCTTAGAC 57.148 47.619 0.00 0.00 0.00 2.59
456 1121 3.422796 TCGCTGGAGTTTCTCTTAGACT 58.577 45.455 0.00 0.00 0.00 3.24
457 1122 4.586884 TCGCTGGAGTTTCTCTTAGACTA 58.413 43.478 0.00 0.00 0.00 2.59
458 1123 4.395542 TCGCTGGAGTTTCTCTTAGACTAC 59.604 45.833 0.00 0.00 0.00 2.73
459 1124 4.439016 CGCTGGAGTTTCTCTTAGACTACC 60.439 50.000 0.00 0.00 0.00 3.18
460 1125 4.142116 GCTGGAGTTTCTCTTAGACTACCC 60.142 50.000 0.00 0.00 0.00 3.69
461 1126 5.006896 TGGAGTTTCTCTTAGACTACCCA 57.993 43.478 0.00 0.00 0.00 4.51
462 1127 4.771054 TGGAGTTTCTCTTAGACTACCCAC 59.229 45.833 0.00 0.00 0.00 4.61
463 1128 4.771054 GGAGTTTCTCTTAGACTACCCACA 59.229 45.833 0.00 0.00 0.00 4.17
464 1129 5.245526 GGAGTTTCTCTTAGACTACCCACAA 59.754 44.000 0.00 0.00 0.00 3.33
465 1130 6.070710 GGAGTTTCTCTTAGACTACCCACAAT 60.071 42.308 0.00 0.00 0.00 2.71
466 1131 7.123847 GGAGTTTCTCTTAGACTACCCACAATA 59.876 40.741 0.00 0.00 0.00 1.90
467 1132 8.431910 AGTTTCTCTTAGACTACCCACAATAA 57.568 34.615 0.00 0.00 0.00 1.40
468 1133 8.877195 AGTTTCTCTTAGACTACCCACAATAAA 58.123 33.333 0.00 0.00 0.00 1.40
469 1134 9.498176 GTTTCTCTTAGACTACCCACAATAAAA 57.502 33.333 0.00 0.00 0.00 1.52
483 1148 9.707957 ACCCACAATAAAAATAACATAGATGGA 57.292 29.630 0.00 0.00 0.00 3.41
544 1209 9.741647 GGCAAATAATTAATGAAGAAAGAGAGG 57.258 33.333 5.96 0.00 0.00 3.69
545 1210 9.242477 GCAAATAATTAATGAAGAAAGAGAGGC 57.758 33.333 5.96 0.00 0.00 4.70
549 1214 7.951347 AATTAATGAAGAAAGAGAGGCATGT 57.049 32.000 0.00 0.00 0.00 3.21
551 1216 8.674263 ATTAATGAAGAAAGAGAGGCATGTAG 57.326 34.615 0.00 0.00 0.00 2.74
552 1217 5.690464 ATGAAGAAAGAGAGGCATGTAGT 57.310 39.130 0.00 0.00 0.00 2.73
553 1218 6.798427 ATGAAGAAAGAGAGGCATGTAGTA 57.202 37.500 0.00 0.00 0.00 1.82
554 1219 6.605471 TGAAGAAAGAGAGGCATGTAGTAA 57.395 37.500 0.00 0.00 0.00 2.24
555 1220 6.398918 TGAAGAAAGAGAGGCATGTAGTAAC 58.601 40.000 0.00 0.00 0.00 2.50
556 1221 6.014584 TGAAGAAAGAGAGGCATGTAGTAACA 60.015 38.462 0.00 0.00 40.69 2.41
558 1223 7.661536 AGAAAGAGAGGCATGTAGTAACATA 57.338 36.000 0.00 0.00 44.70 2.29
559 1224 7.721402 AGAAAGAGAGGCATGTAGTAACATAG 58.279 38.462 0.00 0.00 44.70 2.23
560 1225 5.461032 AGAGAGGCATGTAGTAACATAGC 57.539 43.478 0.00 0.00 44.70 2.97
561 1226 5.144100 AGAGAGGCATGTAGTAACATAGCT 58.856 41.667 0.00 0.00 44.70 3.32
562 1227 6.307776 AGAGAGGCATGTAGTAACATAGCTA 58.692 40.000 0.00 0.00 44.70 3.32
563 1228 6.432783 AGAGAGGCATGTAGTAACATAGCTAG 59.567 42.308 0.00 0.00 44.70 3.42
564 1229 6.071984 AGAGGCATGTAGTAACATAGCTAGT 58.928 40.000 0.00 0.00 44.70 2.57
565 1230 6.551601 AGAGGCATGTAGTAACATAGCTAGTT 59.448 38.462 0.00 6.69 44.70 2.24
566 1231 7.724506 AGAGGCATGTAGTAACATAGCTAGTTA 59.275 37.037 0.00 5.74 44.70 2.24
567 1232 7.659186 AGGCATGTAGTAACATAGCTAGTTAC 58.341 38.462 24.10 24.10 44.70 2.50
595 1260 9.982651 AATACTATGAGTAACATCACACATACC 57.017 33.333 0.00 0.00 40.07 2.73
596 1261 7.418337 ACTATGAGTAACATCACACATACCA 57.582 36.000 0.00 0.00 40.07 3.25
597 1262 7.847096 ACTATGAGTAACATCACACATACCAA 58.153 34.615 0.00 0.00 40.07 3.67
598 1263 7.981789 ACTATGAGTAACATCACACATACCAAG 59.018 37.037 0.00 0.00 40.07 3.61
599 1264 5.487433 TGAGTAACATCACACATACCAAGG 58.513 41.667 0.00 0.00 0.00 3.61
600 1265 4.261801 AGTAACATCACACATACCAAGGC 58.738 43.478 0.00 0.00 0.00 4.35
601 1266 2.877097 ACATCACACATACCAAGGCA 57.123 45.000 0.00 0.00 0.00 4.75
602 1267 3.153369 ACATCACACATACCAAGGCAA 57.847 42.857 0.00 0.00 0.00 4.52
603 1268 3.084039 ACATCACACATACCAAGGCAAG 58.916 45.455 0.00 0.00 0.00 4.01
604 1269 3.244875 ACATCACACATACCAAGGCAAGA 60.245 43.478 0.00 0.00 0.00 3.02
605 1270 3.719268 TCACACATACCAAGGCAAGAT 57.281 42.857 0.00 0.00 0.00 2.40
606 1271 3.346315 TCACACATACCAAGGCAAGATG 58.654 45.455 0.00 0.00 0.00 2.90
607 1272 3.008923 TCACACATACCAAGGCAAGATGA 59.991 43.478 0.00 0.00 0.00 2.92
608 1273 3.376234 CACACATACCAAGGCAAGATGAG 59.624 47.826 0.00 0.00 0.00 2.90
609 1274 3.009473 ACACATACCAAGGCAAGATGAGT 59.991 43.478 0.00 0.00 0.00 3.41
610 1275 4.012374 CACATACCAAGGCAAGATGAGTT 58.988 43.478 0.00 0.00 0.00 3.01
611 1276 4.460382 CACATACCAAGGCAAGATGAGTTT 59.540 41.667 0.00 0.00 0.00 2.66
612 1277 5.647658 CACATACCAAGGCAAGATGAGTTTA 59.352 40.000 0.00 0.00 0.00 2.01
613 1278 6.319658 CACATACCAAGGCAAGATGAGTTTAT 59.680 38.462 0.00 0.00 0.00 1.40
614 1279 7.498900 CACATACCAAGGCAAGATGAGTTTATA 59.501 37.037 0.00 0.00 0.00 0.98
615 1280 8.052748 ACATACCAAGGCAAGATGAGTTTATAA 58.947 33.333 0.00 0.00 0.00 0.98
616 1281 6.759497 ACCAAGGCAAGATGAGTTTATAAC 57.241 37.500 0.00 0.00 0.00 1.89
617 1282 5.652452 ACCAAGGCAAGATGAGTTTATAACC 59.348 40.000 0.00 0.00 0.00 2.85
618 1283 5.888161 CCAAGGCAAGATGAGTTTATAACCT 59.112 40.000 0.00 0.00 0.00 3.50
619 1284 7.054124 CCAAGGCAAGATGAGTTTATAACCTA 58.946 38.462 0.00 0.00 0.00 3.08
620 1285 7.556275 CCAAGGCAAGATGAGTTTATAACCTAA 59.444 37.037 0.00 0.00 0.00 2.69
621 1286 9.125026 CAAGGCAAGATGAGTTTATAACCTAAT 57.875 33.333 0.00 0.00 0.00 1.73
641 1306 9.851686 ACCTAATAAATGACATCACACATATGT 57.148 29.630 1.41 1.41 40.23 2.29
648 1313 9.453572 AAATGACATCACACATATGTTACTTCT 57.546 29.630 5.37 0.00 37.69 2.85
649 1314 8.654230 ATGACATCACACATATGTTACTTCTC 57.346 34.615 5.37 0.00 37.69 2.87
650 1315 7.610865 TGACATCACACATATGTTACTTCTCA 58.389 34.615 5.37 1.12 37.69 3.27
651 1316 8.260114 TGACATCACACATATGTTACTTCTCAT 58.740 33.333 5.37 0.00 37.69 2.90
652 1317 9.102757 GACATCACACATATGTTACTTCTCATT 57.897 33.333 5.37 0.00 37.69 2.57
653 1318 8.886719 ACATCACACATATGTTACTTCTCATTG 58.113 33.333 5.37 0.00 36.72 2.82
654 1319 8.886719 CATCACACATATGTTACTTCTCATTGT 58.113 33.333 5.37 0.00 36.72 2.71
656 1321 9.586435 TCACACATATGTTACTTCTCATTGTAG 57.414 33.333 5.37 0.00 36.72 2.74
657 1322 9.586435 CACACATATGTTACTTCTCATTGTAGA 57.414 33.333 5.37 0.00 36.72 2.59
699 1364 4.637483 ACATGCATATGTTTACTGTGGC 57.363 40.909 0.00 0.00 45.01 5.01
700 1365 4.272489 ACATGCATATGTTTACTGTGGCT 58.728 39.130 0.00 0.00 45.01 4.75
701 1366 5.436175 ACATGCATATGTTTACTGTGGCTA 58.564 37.500 0.00 0.00 45.01 3.93
702 1367 5.528690 ACATGCATATGTTTACTGTGGCTAG 59.471 40.000 0.00 0.00 45.01 3.42
703 1368 5.097742 TGCATATGTTTACTGTGGCTAGT 57.902 39.130 4.29 0.99 34.71 2.57
704 1369 5.116180 TGCATATGTTTACTGTGGCTAGTC 58.884 41.667 4.29 0.00 32.19 2.59
705 1370 5.104941 TGCATATGTTTACTGTGGCTAGTCT 60.105 40.000 4.29 0.00 32.19 3.24
706 1371 5.817816 GCATATGTTTACTGTGGCTAGTCTT 59.182 40.000 4.29 0.00 32.19 3.01
707 1372 6.984474 GCATATGTTTACTGTGGCTAGTCTTA 59.016 38.462 4.29 0.00 32.19 2.10
708 1373 7.657761 GCATATGTTTACTGTGGCTAGTCTTAT 59.342 37.037 4.29 0.00 32.19 1.73
711 1376 6.570692 TGTTTACTGTGGCTAGTCTTATAGC 58.429 40.000 0.00 0.00 46.13 2.97
717 1382 1.687628 GCTAGTCTTATAGCGCACGG 58.312 55.000 11.47 0.00 38.90 4.94
718 1383 1.666311 GCTAGTCTTATAGCGCACGGG 60.666 57.143 11.47 0.00 38.90 5.28
719 1384 1.607628 CTAGTCTTATAGCGCACGGGT 59.392 52.381 11.47 0.00 0.00 5.28
720 1385 0.822164 AGTCTTATAGCGCACGGGTT 59.178 50.000 11.47 0.00 0.00 4.11
721 1386 1.206371 AGTCTTATAGCGCACGGGTTT 59.794 47.619 11.47 0.00 0.00 3.27
722 1387 1.326548 GTCTTATAGCGCACGGGTTTG 59.673 52.381 11.47 0.00 0.00 2.93
723 1388 0.655733 CTTATAGCGCACGGGTTTGG 59.344 55.000 11.47 0.00 0.00 3.28
768 1433 0.394899 CTGGGGCCTGATTCTTGGAC 60.395 60.000 0.84 0.00 0.00 4.02
795 1460 1.609210 GGCTTGGGGGCAGCTAAAA 60.609 57.895 0.00 0.00 40.53 1.52
796 1461 1.191489 GGCTTGGGGGCAGCTAAAAA 61.191 55.000 0.00 0.00 40.53 1.94
897 1594 1.447140 GGCACGTATCCTGCGTCAA 60.447 57.895 0.00 0.00 40.90 3.18
920 1617 4.891566 GTGCAGACGAATCCGACT 57.108 55.556 0.00 0.00 41.09 4.18
929 1627 1.825474 ACGAATCCGACTGAAGATGGT 59.175 47.619 0.00 0.00 39.50 3.55
954 1654 0.813210 GCTGCGAAATCTCTCCTGGG 60.813 60.000 0.00 0.00 0.00 4.45
964 1664 1.001269 TCTCCTGGGTGACGATCGT 60.001 57.895 22.97 22.97 0.00 3.73
997 1697 2.107552 ACTTCCCCAAAATCTCACCGAA 59.892 45.455 0.00 0.00 0.00 4.30
1119 1831 2.608988 CACACTCCCCTGCCCTCT 60.609 66.667 0.00 0.00 0.00 3.69
1120 1832 2.284995 ACACTCCCCTGCCCTCTC 60.285 66.667 0.00 0.00 0.00 3.20
1121 1833 3.465403 CACTCCCCTGCCCTCTCG 61.465 72.222 0.00 0.00 0.00 4.04
1171 1902 4.388499 CACCGGGCAAGCGGTAGT 62.388 66.667 6.32 0.00 36.65 2.73
1212 1943 4.951963 GCGGATCCGGGAAGAGCG 62.952 72.222 33.98 7.06 40.19 5.03
1237 1968 1.677637 GGCGGATCGGGAAGAGAAGT 61.678 60.000 2.13 0.00 0.00 3.01
1265 1996 0.616111 TCAGCAAGACCTCCTCCCTC 60.616 60.000 0.00 0.00 0.00 4.30
1284 2015 3.873361 CCTCCAAGGTATATATGCGCATG 59.127 47.826 32.48 13.87 0.00 4.06
1300 2031 2.363680 CGCATGCCCATTACCCAATAAA 59.636 45.455 13.15 0.00 0.00 1.40
1321 2052 3.214328 ACTGCCAGAATTTTTGACGAGT 58.786 40.909 0.00 0.00 0.00 4.18
1323 2054 3.476552 TGCCAGAATTTTTGACGAGTCT 58.523 40.909 4.78 0.00 0.00 3.24
1365 2096 5.689835 TGTTGGCTGGATATGTTGCTATAA 58.310 37.500 0.00 0.00 0.00 0.98
1371 2102 3.916349 TGGATATGTTGCTATAAGCCCCT 59.084 43.478 0.00 0.00 41.51 4.79
1380 2111 2.417719 CTATAAGCCCCTGTGCGAATC 58.582 52.381 0.00 0.00 36.02 2.52
1410 2157 3.981211 AGATTTTTGTGGCATGTGTGTC 58.019 40.909 0.00 0.00 0.00 3.67
1411 2158 3.384146 AGATTTTTGTGGCATGTGTGTCA 59.616 39.130 0.00 0.00 37.69 3.58
1412 2159 2.867287 TTTTGTGGCATGTGTGTCAG 57.133 45.000 0.00 0.00 41.38 3.51
1413 2160 1.761449 TTTGTGGCATGTGTGTCAGT 58.239 45.000 0.00 0.00 41.38 3.41
1414 2161 1.023502 TTGTGGCATGTGTGTCAGTG 58.976 50.000 0.00 0.00 41.38 3.66
1415 2162 0.107263 TGTGGCATGTGTGTCAGTGT 60.107 50.000 0.00 0.00 41.38 3.55
1416 2163 0.308684 GTGGCATGTGTGTCAGTGTG 59.691 55.000 0.00 0.00 41.38 3.82
1417 2164 0.107263 TGGCATGTGTGTCAGTGTGT 60.107 50.000 0.00 0.00 34.41 3.72
1418 2165 0.308684 GGCATGTGTGTCAGTGTGTG 59.691 55.000 0.00 0.00 0.00 3.82
1419 2166 0.308684 GCATGTGTGTCAGTGTGTGG 59.691 55.000 0.00 0.00 0.00 4.17
1420 2167 1.667236 CATGTGTGTCAGTGTGTGGT 58.333 50.000 0.00 0.00 0.00 4.16
1421 2168 2.832563 CATGTGTGTCAGTGTGTGGTA 58.167 47.619 0.00 0.00 0.00 3.25
1422 2169 3.402110 CATGTGTGTCAGTGTGTGGTAT 58.598 45.455 0.00 0.00 0.00 2.73
1423 2170 3.552132 TGTGTGTCAGTGTGTGGTATT 57.448 42.857 0.00 0.00 0.00 1.89
1424 2171 3.462982 TGTGTGTCAGTGTGTGGTATTC 58.537 45.455 0.00 0.00 0.00 1.75
1425 2172 3.118592 TGTGTGTCAGTGTGTGGTATTCA 60.119 43.478 0.00 0.00 0.00 2.57
1426 2173 3.874543 GTGTGTCAGTGTGTGGTATTCAA 59.125 43.478 0.00 0.00 0.00 2.69
1427 2174 4.024893 GTGTGTCAGTGTGTGGTATTCAAG 60.025 45.833 0.00 0.00 0.00 3.02
1428 2175 4.127171 GTGTCAGTGTGTGGTATTCAAGT 58.873 43.478 0.00 0.00 0.00 3.16
1429 2176 4.211374 GTGTCAGTGTGTGGTATTCAAGTC 59.789 45.833 0.00 0.00 0.00 3.01
1430 2177 4.141824 TGTCAGTGTGTGGTATTCAAGTCA 60.142 41.667 0.00 0.00 0.00 3.41
1431 2178 4.997395 GTCAGTGTGTGGTATTCAAGTCAT 59.003 41.667 0.00 0.00 0.00 3.06
1432 2179 6.163476 GTCAGTGTGTGGTATTCAAGTCATA 58.837 40.000 0.00 0.00 0.00 2.15
1433 2180 6.818644 GTCAGTGTGTGGTATTCAAGTCATAT 59.181 38.462 0.00 0.00 0.00 1.78
1434 2181 7.334421 GTCAGTGTGTGGTATTCAAGTCATATT 59.666 37.037 0.00 0.00 0.00 1.28
1435 2182 7.882791 TCAGTGTGTGGTATTCAAGTCATATTT 59.117 33.333 0.00 0.00 0.00 1.40
1436 2183 8.514594 CAGTGTGTGGTATTCAAGTCATATTTT 58.485 33.333 0.00 0.00 0.00 1.82
1437 2184 9.077885 AGTGTGTGGTATTCAAGTCATATTTTT 57.922 29.630 0.00 0.00 0.00 1.94
1438 2185 9.128107 GTGTGTGGTATTCAAGTCATATTTTTG 57.872 33.333 0.00 0.00 0.00 2.44
1439 2186 7.812191 TGTGTGGTATTCAAGTCATATTTTTGC 59.188 33.333 0.00 0.00 0.00 3.68
1440 2187 7.812191 GTGTGGTATTCAAGTCATATTTTTGCA 59.188 33.333 0.00 0.00 0.00 4.08
1441 2188 8.363390 TGTGGTATTCAAGTCATATTTTTGCAA 58.637 29.630 0.00 0.00 0.00 4.08
1442 2189 9.369904 GTGGTATTCAAGTCATATTTTTGCAAT 57.630 29.630 0.00 0.00 0.00 3.56
1443 2190 9.585099 TGGTATTCAAGTCATATTTTTGCAATC 57.415 29.630 0.00 0.00 0.00 2.67
1444 2191 9.034544 GGTATTCAAGTCATATTTTTGCAATCC 57.965 33.333 0.00 0.00 0.00 3.01
1445 2192 9.585099 GTATTCAAGTCATATTTTTGCAATCCA 57.415 29.630 0.00 0.00 0.00 3.41
1447 2194 8.481974 TTCAAGTCATATTTTTGCAATCCATG 57.518 30.769 0.00 2.36 0.00 3.66
1448 2195 7.613585 TCAAGTCATATTTTTGCAATCCATGT 58.386 30.769 0.00 0.00 0.00 3.21
1449 2196 8.095792 TCAAGTCATATTTTTGCAATCCATGTT 58.904 29.630 0.00 0.00 0.00 2.71
1450 2197 7.837202 AGTCATATTTTTGCAATCCATGTTG 57.163 32.000 0.00 0.00 0.00 3.33
1451 2198 6.819649 AGTCATATTTTTGCAATCCATGTTGG 59.180 34.615 0.00 0.00 39.43 3.77
1452 2199 5.585445 TCATATTTTTGCAATCCATGTTGGC 59.415 36.000 0.00 0.00 37.47 4.52
1453 2200 2.924757 TTTTGCAATCCATGTTGGCA 57.075 40.000 0.00 0.00 37.47 4.92
1454 2201 3.420300 TTTTGCAATCCATGTTGGCAT 57.580 38.095 0.00 0.00 37.47 4.40
1455 2202 4.548451 TTTTGCAATCCATGTTGGCATA 57.452 36.364 0.00 0.00 37.47 3.14
1456 2203 4.757019 TTTGCAATCCATGTTGGCATAT 57.243 36.364 0.00 0.00 37.47 1.78
1457 2204 3.737032 TGCAATCCATGTTGGCATATG 57.263 42.857 0.00 0.00 37.47 1.78
1458 2205 2.224090 TGCAATCCATGTTGGCATATGC 60.224 45.455 19.79 19.79 37.47 3.14
1459 2206 2.036733 GCAATCCATGTTGGCATATGCT 59.963 45.455 26.12 4.00 41.70 3.79
1460 2207 3.493699 GCAATCCATGTTGGCATATGCTT 60.494 43.478 26.12 7.38 41.70 3.91
1471 2218 1.404391 GCATATGCTTTGCTGCTGTCT 59.596 47.619 20.64 0.00 37.14 3.41
1478 2225 2.729882 GCTTTGCTGCTGTCTGAAATTG 59.270 45.455 0.00 0.00 0.00 2.32
1482 2229 2.291465 TGCTGCTGTCTGAAATTGTGTC 59.709 45.455 0.00 0.00 0.00 3.67
1504 2251 4.457257 TCGATGGATTTTGTTGCATGTGTA 59.543 37.500 0.00 0.00 0.00 2.90
1507 2254 5.718724 TGGATTTTGTTGCATGTGTATGA 57.281 34.783 0.00 0.00 36.36 2.15
1523 2270 9.016623 CATGTGTATGACATTCAAATCATGAAC 57.983 33.333 14.06 0.00 43.20 3.18
1625 2372 6.676950 TCAAATTTGTATGCAACAGTGGTAG 58.323 36.000 17.47 0.00 39.87 3.18
1719 2483 3.212275 GGACGAGCCTTCCTCCTC 58.788 66.667 0.00 0.00 37.27 3.71
1720 2484 2.428085 GGACGAGCCTTCCTCCTCC 61.428 68.421 0.00 0.00 38.18 4.30
1721 2485 2.364448 ACGAGCCTTCCTCCTCCC 60.364 66.667 0.00 0.00 37.27 4.30
1722 2486 2.042435 CGAGCCTTCCTCCTCCCT 60.042 66.667 0.00 0.00 37.27 4.20
1723 2487 1.687493 CGAGCCTTCCTCCTCCCTT 60.687 63.158 0.00 0.00 37.27 3.95
1724 2488 1.911471 GAGCCTTCCTCCTCCCTTG 59.089 63.158 0.00 0.00 34.35 3.61
1725 2489 2.264120 GAGCCTTCCTCCTCCCTTGC 62.264 65.000 0.00 0.00 34.35 4.01
1726 2490 2.586792 CCTTCCTCCTCCCTTGCG 59.413 66.667 0.00 0.00 0.00 4.85
1727 2491 2.294078 CCTTCCTCCTCCCTTGCGT 61.294 63.158 0.00 0.00 0.00 5.24
1728 2492 1.219393 CTTCCTCCTCCCTTGCGTC 59.781 63.158 0.00 0.00 0.00 5.19
1786 2551 1.516423 GCCTTCGTCACTAGACCCC 59.484 63.158 0.00 0.00 41.87 4.95
1804 2570 2.171448 CCCCATCTAGTTGCTGCTAACT 59.829 50.000 17.22 17.22 43.03 2.24
1834 2600 2.159338 CGTGCGAAGGGTAGCTAACTAA 60.159 50.000 9.06 0.00 0.00 2.24
2017 2795 3.367025 GGTAACTACTTTGCTGTGCTACG 59.633 47.826 0.00 0.00 0.00 3.51
2058 2836 3.490348 ACCCTTGAGAAAATGTCACCTG 58.510 45.455 0.00 0.00 0.00 4.00
2367 3150 2.152016 GCAGAAGGCTCGGTTAGTTTT 58.848 47.619 0.00 0.00 40.25 2.43
2446 3751 6.073440 GCAATTTGTTCTTCGTGAGTTAGGTA 60.073 38.462 0.00 0.00 0.00 3.08
2504 3809 5.499004 TCAGTTGCTTTTCTGTATAGGGT 57.501 39.130 0.00 0.00 33.89 4.34
2520 3825 7.797062 TGTATAGGGTAGATTTGTACATTGCA 58.203 34.615 0.00 0.00 0.00 4.08
2523 3828 4.705023 AGGGTAGATTTGTACATTGCAACC 59.295 41.667 0.00 2.59 0.00 3.77
2528 3833 5.219633 AGATTTGTACATTGCAACCGTTTC 58.780 37.500 0.00 0.56 0.00 2.78
2565 3870 8.436046 TTTGTAACCTGTACTGTAATCGTTTT 57.564 30.769 0.00 0.00 0.00 2.43
2672 3982 3.292492 TCAGACTTATCAGCGGTCCTA 57.708 47.619 0.00 0.00 0.00 2.94
2743 4055 1.728971 CTCTCAACTACGCAGCAAAGG 59.271 52.381 0.00 0.00 0.00 3.11
2820 4133 6.959639 AAAGATTGCATGACCCGTTATAAT 57.040 33.333 0.00 0.00 0.00 1.28
2963 4279 1.153168 GTGGTGGTGTGCTCTGTGT 60.153 57.895 0.00 0.00 0.00 3.72
2999 4315 0.102844 TGCCACAGCTTGTTTCAAGC 59.897 50.000 21.90 21.90 43.31 4.01
3050 4366 7.285401 ACCAAATTATACGCAAGAAATGGATCT 59.715 33.333 0.00 0.00 43.62 2.75
3054 4370 7.857734 TTATACGCAAGAAATGGATCTTTCA 57.142 32.000 9.39 0.00 37.56 2.69
3079 4395 4.939509 AAACTCATGCCAACGTATACAC 57.060 40.909 3.32 0.00 0.00 2.90
3093 4409 7.902917 CCAACGTATACACACATTTGTCATTAG 59.097 37.037 3.32 0.00 31.66 1.73
3319 4650 7.410485 GTGAGTGACCTAGCTTTATATTTTGC 58.590 38.462 0.00 0.00 0.00 3.68
3640 5002 9.213777 TGAGGTTTATACTTCCTATTCTGATGT 57.786 33.333 0.00 0.00 29.74 3.06
3746 5108 3.059982 CTTCGTCCTGGAGGCACA 58.940 61.111 11.46 0.00 34.44 4.57
3903 5268 1.556911 TCAGCTGAAGGGATGGAGTTC 59.443 52.381 15.67 0.00 0.00 3.01
3958 5323 8.283291 GTGAAGAGTACACAGAAAAGGTAATTG 58.717 37.037 0.00 0.00 38.05 2.32
3997 5370 9.670442 ATTACTTCTTATATGTTACTCCCTCCA 57.330 33.333 0.00 0.00 0.00 3.86
3998 5371 9.670442 TTACTTCTTATATGTTACTCCCTCCAT 57.330 33.333 0.00 0.00 0.00 3.41
3999 5372 8.196378 ACTTCTTATATGTTACTCCCTCCATC 57.804 38.462 0.00 0.00 0.00 3.51
4000 5373 7.235812 ACTTCTTATATGTTACTCCCTCCATCC 59.764 40.741 0.00 0.00 0.00 3.51
4001 5374 6.023603 TCTTATATGTTACTCCCTCCATCCC 58.976 44.000 0.00 0.00 0.00 3.85
4002 5375 2.587060 ATGTTACTCCCTCCATCCCA 57.413 50.000 0.00 0.00 0.00 4.37
4003 5376 2.587060 TGTTACTCCCTCCATCCCAT 57.413 50.000 0.00 0.00 0.00 4.00
4004 5377 3.717507 TGTTACTCCCTCCATCCCATA 57.282 47.619 0.00 0.00 0.00 2.74
4005 5378 4.015617 TGTTACTCCCTCCATCCCATAA 57.984 45.455 0.00 0.00 0.00 1.90
4006 5379 4.577096 TGTTACTCCCTCCATCCCATAAT 58.423 43.478 0.00 0.00 0.00 1.28
4007 5380 4.350816 TGTTACTCCCTCCATCCCATAATG 59.649 45.833 0.00 0.00 0.00 1.90
4008 5381 1.707427 ACTCCCTCCATCCCATAATGC 59.293 52.381 0.00 0.00 0.00 3.56
4009 5382 1.706866 CTCCCTCCATCCCATAATGCA 59.293 52.381 0.00 0.00 0.00 3.96
4010 5383 2.108776 CTCCCTCCATCCCATAATGCAA 59.891 50.000 0.00 0.00 0.00 4.08
4011 5384 2.108776 TCCCTCCATCCCATAATGCAAG 59.891 50.000 0.00 0.00 0.00 4.01
4012 5385 2.108776 CCCTCCATCCCATAATGCAAGA 59.891 50.000 0.00 0.00 0.00 3.02
4013 5386 3.152341 CCTCCATCCCATAATGCAAGAC 58.848 50.000 0.00 0.00 0.00 3.01
4014 5387 2.810274 CTCCATCCCATAATGCAAGACG 59.190 50.000 0.00 0.00 0.00 4.18
4015 5388 2.172505 TCCATCCCATAATGCAAGACGT 59.827 45.455 0.00 0.00 0.00 4.34
4016 5389 2.291465 CCATCCCATAATGCAAGACGTG 59.709 50.000 0.00 0.00 0.00 4.49
4017 5390 2.779755 TCCCATAATGCAAGACGTGT 57.220 45.000 0.00 0.00 0.00 4.49
4018 5391 3.066291 TCCCATAATGCAAGACGTGTT 57.934 42.857 0.00 0.00 0.00 3.32
4019 5392 3.417101 TCCCATAATGCAAGACGTGTTT 58.583 40.909 0.00 0.00 0.00 2.83
4020 5393 3.823873 TCCCATAATGCAAGACGTGTTTT 59.176 39.130 0.00 0.00 0.00 2.43
4021 5394 3.919804 CCCATAATGCAAGACGTGTTTTG 59.080 43.478 0.00 0.00 0.00 2.44
4022 5395 3.919804 CCATAATGCAAGACGTGTTTTGG 59.080 43.478 0.00 0.00 0.00 3.28
4023 5396 1.851658 AATGCAAGACGTGTTTTGGC 58.148 45.000 0.00 0.00 0.00 4.52
4024 5397 0.031994 ATGCAAGACGTGTTTTGGCC 59.968 50.000 0.00 0.00 0.00 5.36
4025 5398 1.299850 GCAAGACGTGTTTTGGCCC 60.300 57.895 0.00 0.00 0.00 5.80
4026 5399 1.734388 GCAAGACGTGTTTTGGCCCT 61.734 55.000 0.00 0.00 0.00 5.19
4027 5400 1.600023 CAAGACGTGTTTTGGCCCTA 58.400 50.000 0.00 0.00 0.00 3.53
4028 5401 1.265905 CAAGACGTGTTTTGGCCCTAC 59.734 52.381 0.00 0.00 0.00 3.18
4029 5402 0.470766 AGACGTGTTTTGGCCCTACA 59.529 50.000 0.00 0.00 0.00 2.74
4030 5403 0.589708 GACGTGTTTTGGCCCTACAC 59.410 55.000 17.53 17.53 38.96 2.90
4031 5404 0.181824 ACGTGTTTTGGCCCTACACT 59.818 50.000 22.15 11.66 39.90 3.55
4032 5405 1.417145 ACGTGTTTTGGCCCTACACTA 59.583 47.619 22.15 0.00 39.90 2.74
4033 5406 2.073816 CGTGTTTTGGCCCTACACTAG 58.926 52.381 22.15 10.00 39.90 2.57
4034 5407 2.549349 CGTGTTTTGGCCCTACACTAGT 60.549 50.000 22.15 0.00 39.90 2.57
4035 5408 2.812011 GTGTTTTGGCCCTACACTAGTG 59.188 50.000 21.44 21.44 39.18 2.74
4036 5409 1.810755 GTTTTGGCCCTACACTAGTGC 59.189 52.381 22.90 8.20 0.00 4.40
4038 5411 3.721868 GGCCCTACACTAGTGCCA 58.278 61.111 22.90 10.02 46.88 4.92
4039 5412 1.988015 GGCCCTACACTAGTGCCAA 59.012 57.895 22.90 7.81 46.88 4.52
4040 5413 0.326927 GGCCCTACACTAGTGCCAAA 59.673 55.000 22.90 5.31 46.88 3.28
4041 5414 1.271707 GGCCCTACACTAGTGCCAAAA 60.272 52.381 22.90 2.85 46.88 2.44
4042 5415 2.510613 GCCCTACACTAGTGCCAAAAA 58.489 47.619 22.90 1.11 0.00 1.94
4064 5437 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
4065 5438 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
4066 5439 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
4067 5440 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
4068 5441 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
4069 5442 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
4097 5471 9.903682 AGTTTTCATTACTGACTGATCATTTTG 57.096 29.630 0.00 0.00 33.22 2.44
4100 5478 9.681692 TTTCATTACTGACTGATCATTTTGTTG 57.318 29.630 0.00 0.00 33.22 3.33
4101 5479 8.394971 TCATTACTGACTGATCATTTTGTTGT 57.605 30.769 0.00 0.00 33.22 3.32
4102 5480 8.849168 TCATTACTGACTGATCATTTTGTTGTT 58.151 29.630 0.00 0.00 33.22 2.83
4103 5481 9.121517 CATTACTGACTGATCATTTTGTTGTTC 57.878 33.333 0.00 0.00 33.22 3.18
4277 5655 7.696992 ATTCGAGTGTTTACCCAAATTGTAT 57.303 32.000 0.00 0.00 0.00 2.29
4278 5656 8.795842 ATTCGAGTGTTTACCCAAATTGTATA 57.204 30.769 0.00 0.00 0.00 1.47
4285 5663 8.789762 GTGTTTACCCAAATTGTATAACAGAGT 58.210 33.333 0.00 0.00 0.00 3.24
4365 5743 2.351726 GCACACTACCCTTTCTAATGCG 59.648 50.000 0.00 0.00 0.00 4.73
4368 5746 5.357257 CACACTACCCTTTCTAATGCGTAT 58.643 41.667 0.00 0.00 0.00 3.06
4480 5858 0.610687 AACTCTGCACTCCTGTAGGC 59.389 55.000 0.00 0.00 31.28 3.93
4505 5883 2.090760 TGTTGTTTGCTGCAGTCTTCA 58.909 42.857 16.64 7.57 0.00 3.02
4514 5892 2.808202 GCTGCAGTCTTCAGTTCTTCCA 60.808 50.000 16.64 0.00 34.21 3.53
4559 5937 3.353557 AGTATGTAGCTGACGTCCTTCA 58.646 45.455 14.12 8.26 0.00 3.02
4689 6072 2.806244 GCTTCCTGCTTTTCACTCGTTA 59.194 45.455 0.00 0.00 38.95 3.18
4755 6139 5.277825 TCAGTAACAAATTCTTTGGCAACG 58.722 37.500 0.00 0.00 44.81 4.10
4827 6211 2.146920 ACTACTGGCAGAGGAGGTAC 57.853 55.000 23.66 0.00 36.86 3.34
4830 6217 0.178932 ACTGGCAGAGGAGGTACACA 60.179 55.000 23.66 0.00 0.00 3.72
4859 6246 1.691127 CTCAGTATGCTATGGCGACG 58.309 55.000 0.00 0.00 42.25 5.12
4876 6263 0.180406 ACGTGTGCCTCTGTTTCCTT 59.820 50.000 0.00 0.00 0.00 3.36
4927 6314 4.096382 TCTCGAAAATTTTGCTGCCCTATC 59.904 41.667 8.47 0.00 0.00 2.08
4942 6329 7.559533 TGCTGCCCTATCTTTTGTTATCATTTA 59.440 33.333 0.00 0.00 0.00 1.40
5306 6715 3.951037 TGCTGTTAACAACTGAACCACAT 59.049 39.130 10.03 0.00 32.71 3.21
5702 7126 7.174080 TGTGGAACATCGAAATATTTGTTCAGA 59.826 33.333 22.83 12.10 45.67 3.27
5733 7157 9.991906 TTTCTTGTAAAGTAGTACTTGCACTAT 57.008 29.630 16.22 2.37 46.34 2.12
5747 7171 1.672881 GCACTATGCACACCTCCAATC 59.327 52.381 0.00 0.00 44.26 2.67
5768 7192 1.612726 CCTGAGAAGGTTGGGCTTGAG 60.613 57.143 0.00 0.00 0.00 3.02
5770 7194 1.202806 TGAGAAGGTTGGGCTTGAGTG 60.203 52.381 0.00 0.00 0.00 3.51
5856 7282 7.766278 CAGGAGCTTGTTAATCAACTACAGTAT 59.234 37.037 0.00 0.00 35.56 2.12
5857 7283 8.322091 AGGAGCTTGTTAATCAACTACAGTATT 58.678 33.333 0.00 0.00 35.56 1.89
5858 7284 9.595823 GGAGCTTGTTAATCAACTACAGTATTA 57.404 33.333 0.00 0.00 35.56 0.98
5864 7290 9.841295 TGTTAATCAACTACAGTATTAATCCCC 57.159 33.333 0.00 0.00 35.56 4.81
5865 7291 9.281371 GTTAATCAACTACAGTATTAATCCCCC 57.719 37.037 0.00 0.00 0.00 5.40
5866 7292 7.707467 AATCAACTACAGTATTAATCCCCCT 57.293 36.000 0.00 0.00 0.00 4.79
5867 7293 8.808240 AATCAACTACAGTATTAATCCCCCTA 57.192 34.615 0.00 0.00 0.00 3.53
5868 7294 8.808240 ATCAACTACAGTATTAATCCCCCTAA 57.192 34.615 0.00 0.00 0.00 2.69
5869 7295 8.626917 TCAACTACAGTATTAATCCCCCTAAA 57.373 34.615 0.00 0.00 0.00 1.85
5870 7296 9.060137 TCAACTACAGTATTAATCCCCCTAAAA 57.940 33.333 0.00 0.00 0.00 1.52
5871 7297 9.689501 CAACTACAGTATTAATCCCCCTAAAAA 57.310 33.333 0.00 0.00 0.00 1.94
5907 7535 2.365617 TCAAGGGCTACGATTCTGATCC 59.634 50.000 0.00 0.00 0.00 3.36
5915 7543 0.936764 CGATTCTGATCCGTGGCTCG 60.937 60.000 1.28 1.28 39.52 5.03
5916 7544 0.103208 GATTCTGATCCGTGGCTCGT 59.897 55.000 8.25 0.00 37.94 4.18
5920 7548 0.179100 CTGATCCGTGGCTCGTGAAT 60.179 55.000 8.25 0.00 37.94 2.57
5921 7549 0.460109 TGATCCGTGGCTCGTGAATG 60.460 55.000 8.25 0.00 37.94 2.67
5925 7553 0.110238 CCGTGGCTCGTGAATGTTTG 60.110 55.000 8.25 0.00 37.94 2.93
5928 7556 2.650608 GTGGCTCGTGAATGTTTGTTC 58.349 47.619 0.00 0.00 0.00 3.18
6038 7755 9.680315 ACGTTTGATGCTTATACTAATCTAGTC 57.320 33.333 0.00 0.00 40.14 2.59
6050 7767 8.950208 ATACTAATCTAGTCTGGCAAAACTTC 57.050 34.615 7.42 0.00 40.14 3.01
6225 7972 2.039084 GGTTGCCGGATTGAGGATCTAT 59.961 50.000 5.05 0.00 35.02 1.98
6241 7988 7.739444 TGAGGATCTATGGGTAATTCTAATGGT 59.261 37.037 0.00 0.00 34.92 3.55
6254 8002 2.028567 TCTAATGGTCACATGCGACACA 60.029 45.455 15.39 10.90 37.40 3.72
6277 8025 3.554692 GACCATCTTCGCGTGCCG 61.555 66.667 5.77 0.00 38.61 5.69
6350 8098 0.326143 AAACAAGGCCCCCACTGTTT 60.326 50.000 0.00 5.42 37.15 2.83
6369 8117 1.229359 CCTCCCCTGCATGCTTCAT 59.771 57.895 20.33 0.00 0.00 2.57
6387 8135 3.872696 TCATTGGTGTGTGATATTCGCT 58.127 40.909 0.00 0.00 0.00 4.93
6388 8136 4.260985 TCATTGGTGTGTGATATTCGCTT 58.739 39.130 0.00 0.00 0.00 4.68
6414 8162 2.031560 CGCTTGCTCCATTTATTGCGTA 59.968 45.455 0.00 0.00 37.80 4.42
6424 8172 7.307989 GCTCCATTTATTGCGTACAACTATCAT 60.308 37.037 0.00 0.00 38.99 2.45
6634 8382 6.623767 GCAACTAGGAAAATGACCAGATGTTC 60.624 42.308 0.00 0.00 0.00 3.18
6694 8443 8.122952 CGTGTTTCTTAATGATACTCAAATCCC 58.877 37.037 0.00 0.00 0.00 3.85
6703 8452 1.892209 ACTCAAATCCCGGTTGTGTC 58.108 50.000 0.00 0.00 29.17 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.425668 GCGTGGGGCAACATTTAGTTAT 59.574 45.455 0.00 0.00 42.87 1.89
12 13 2.909965 AACGCGTGGGGCAACATT 60.910 55.556 14.98 0.00 43.84 2.71
112 133 8.617809 TCAAGTTCTTAGACGCTTTGTATTTTT 58.382 29.630 0.00 0.00 0.00 1.94
113 134 8.149973 TCAAGTTCTTAGACGCTTTGTATTTT 57.850 30.769 0.00 0.00 0.00 1.82
114 135 7.441458 ACTCAAGTTCTTAGACGCTTTGTATTT 59.559 33.333 0.00 0.00 0.00 1.40
115 136 6.929606 ACTCAAGTTCTTAGACGCTTTGTATT 59.070 34.615 0.00 0.00 0.00 1.89
116 137 6.456501 ACTCAAGTTCTTAGACGCTTTGTAT 58.543 36.000 0.00 0.00 0.00 2.29
117 138 5.839621 ACTCAAGTTCTTAGACGCTTTGTA 58.160 37.500 0.00 0.00 0.00 2.41
118 139 4.694339 ACTCAAGTTCTTAGACGCTTTGT 58.306 39.130 0.00 0.00 0.00 2.83
119 140 5.659048 AACTCAAGTTCTTAGACGCTTTG 57.341 39.130 0.00 0.00 31.64 2.77
120 141 5.815740 TGAAACTCAAGTTCTTAGACGCTTT 59.184 36.000 0.00 0.00 37.25 3.51
121 142 5.357257 TGAAACTCAAGTTCTTAGACGCTT 58.643 37.500 0.00 0.00 37.25 4.68
122 143 4.945246 TGAAACTCAAGTTCTTAGACGCT 58.055 39.130 0.00 0.00 37.25 5.07
123 144 5.652744 TTGAAACTCAAGTTCTTAGACGC 57.347 39.130 0.00 0.00 37.25 5.19
157 179 6.865205 GTCCCTTCTCATTTTTGTCAGAAATG 59.135 38.462 18.38 18.38 42.84 2.32
164 186 5.774498 AGTTGTCCCTTCTCATTTTTGTC 57.226 39.130 0.00 0.00 0.00 3.18
174 196 6.387220 AGCATACCTATAAAGTTGTCCCTTCT 59.613 38.462 0.00 0.00 0.00 2.85
187 209 4.528987 TGGGCGATTGTAGCATACCTATAA 59.471 41.667 0.00 0.00 42.12 0.98
274 297 6.924612 GCCACATCATAAATTCATGCATGTTA 59.075 34.615 25.43 16.91 30.80 2.41
329 352 8.355272 TGCATGCATGTCATAAATTACATTTC 57.645 30.769 26.79 5.42 34.12 2.17
442 1107 6.936968 ATTGTGGGTAGTCTAAGAGAAACT 57.063 37.500 0.00 0.00 0.00 2.66
443 1108 9.498176 TTTTATTGTGGGTAGTCTAAGAGAAAC 57.502 33.333 0.00 0.00 0.00 2.78
457 1122 9.707957 TCCATCTATGTTATTTTTATTGTGGGT 57.292 29.630 0.00 0.00 0.00 4.51
468 1133 9.241919 TGTGTGATGTTTCCATCTATGTTATTT 57.758 29.630 4.51 0.00 46.38 1.40
469 1134 8.806429 TGTGTGATGTTTCCATCTATGTTATT 57.194 30.769 4.51 0.00 46.38 1.40
470 1135 8.985315 ATGTGTGATGTTTCCATCTATGTTAT 57.015 30.769 4.51 0.00 46.38 1.89
472 1137 8.985315 ATATGTGTGATGTTTCCATCTATGTT 57.015 30.769 4.51 0.00 46.38 2.71
473 1138 8.985315 AATATGTGTGATGTTTCCATCTATGT 57.015 30.769 4.51 0.00 46.38 2.29
477 1142 9.685276 TTCTAAATATGTGTGATGTTTCCATCT 57.315 29.630 4.51 0.00 46.38 2.90
518 1183 9.741647 CCTCTCTTTCTTCATTAATTATTTGCC 57.258 33.333 0.00 0.00 0.00 4.52
519 1184 9.242477 GCCTCTCTTTCTTCATTAATTATTTGC 57.758 33.333 0.00 0.00 0.00 3.68
523 1188 9.638176 ACATGCCTCTCTTTCTTCATTAATTAT 57.362 29.630 0.00 0.00 0.00 1.28
525 1190 7.951347 ACATGCCTCTCTTTCTTCATTAATT 57.049 32.000 0.00 0.00 0.00 1.40
526 1191 8.270744 ACTACATGCCTCTCTTTCTTCATTAAT 58.729 33.333 0.00 0.00 0.00 1.40
527 1192 7.624549 ACTACATGCCTCTCTTTCTTCATTAA 58.375 34.615 0.00 0.00 0.00 1.40
528 1193 7.187824 ACTACATGCCTCTCTTTCTTCATTA 57.812 36.000 0.00 0.00 0.00 1.90
529 1194 6.059787 ACTACATGCCTCTCTTTCTTCATT 57.940 37.500 0.00 0.00 0.00 2.57
530 1195 5.690464 ACTACATGCCTCTCTTTCTTCAT 57.310 39.130 0.00 0.00 0.00 2.57
531 1196 6.014584 TGTTACTACATGCCTCTCTTTCTTCA 60.015 38.462 0.00 0.00 0.00 3.02
532 1197 6.398918 TGTTACTACATGCCTCTCTTTCTTC 58.601 40.000 0.00 0.00 0.00 2.87
533 1198 6.360370 TGTTACTACATGCCTCTCTTTCTT 57.640 37.500 0.00 0.00 0.00 2.52
534 1199 6.552445 ATGTTACTACATGCCTCTCTTTCT 57.448 37.500 0.00 0.00 43.29 2.52
535 1200 6.422400 GCTATGTTACTACATGCCTCTCTTTC 59.578 42.308 0.00 0.00 44.56 2.62
536 1201 6.098982 AGCTATGTTACTACATGCCTCTCTTT 59.901 38.462 0.00 0.00 44.56 2.52
537 1202 5.600484 AGCTATGTTACTACATGCCTCTCTT 59.400 40.000 0.00 0.00 44.56 2.85
538 1203 5.144100 AGCTATGTTACTACATGCCTCTCT 58.856 41.667 0.00 0.00 44.56 3.10
539 1204 5.461032 AGCTATGTTACTACATGCCTCTC 57.539 43.478 0.00 0.00 44.56 3.20
540 1205 6.071984 ACTAGCTATGTTACTACATGCCTCT 58.928 40.000 0.00 0.00 44.56 3.69
541 1206 6.334102 ACTAGCTATGTTACTACATGCCTC 57.666 41.667 0.00 0.00 44.56 4.70
542 1207 6.732896 AACTAGCTATGTTACTACATGCCT 57.267 37.500 0.00 0.85 44.56 4.75
543 1208 7.870588 GTAACTAGCTATGTTACTACATGCC 57.129 40.000 24.17 8.39 44.56 4.40
569 1234 9.982651 GGTATGTGTGATGTTACTCATAGTATT 57.017 33.333 0.00 0.00 37.57 1.89
570 1235 9.143155 TGGTATGTGTGATGTTACTCATAGTAT 57.857 33.333 0.00 0.00 37.57 2.12
571 1236 8.528044 TGGTATGTGTGATGTTACTCATAGTA 57.472 34.615 0.00 0.00 37.57 1.82
572 1237 7.418337 TGGTATGTGTGATGTTACTCATAGT 57.582 36.000 0.00 0.00 37.57 2.12
573 1238 7.439356 CCTTGGTATGTGTGATGTTACTCATAG 59.561 40.741 0.00 0.00 37.57 2.23
574 1239 7.272244 CCTTGGTATGTGTGATGTTACTCATA 58.728 38.462 0.00 0.00 36.51 2.15
575 1240 6.115446 CCTTGGTATGTGTGATGTTACTCAT 58.885 40.000 0.00 0.00 38.11 2.90
576 1241 5.487433 CCTTGGTATGTGTGATGTTACTCA 58.513 41.667 0.00 0.00 0.00 3.41
577 1242 4.332819 GCCTTGGTATGTGTGATGTTACTC 59.667 45.833 0.00 0.00 0.00 2.59
578 1243 4.261801 GCCTTGGTATGTGTGATGTTACT 58.738 43.478 0.00 0.00 0.00 2.24
579 1244 4.006989 TGCCTTGGTATGTGTGATGTTAC 58.993 43.478 0.00 0.00 0.00 2.50
580 1245 4.293662 TGCCTTGGTATGTGTGATGTTA 57.706 40.909 0.00 0.00 0.00 2.41
581 1246 3.153369 TGCCTTGGTATGTGTGATGTT 57.847 42.857 0.00 0.00 0.00 2.71
582 1247 2.877097 TGCCTTGGTATGTGTGATGT 57.123 45.000 0.00 0.00 0.00 3.06
583 1248 3.346315 TCTTGCCTTGGTATGTGTGATG 58.654 45.455 0.00 0.00 0.00 3.07
584 1249 3.719268 TCTTGCCTTGGTATGTGTGAT 57.281 42.857 0.00 0.00 0.00 3.06
585 1250 3.008923 TCATCTTGCCTTGGTATGTGTGA 59.991 43.478 0.00 0.00 0.00 3.58
586 1251 3.346315 TCATCTTGCCTTGGTATGTGTG 58.654 45.455 0.00 0.00 0.00 3.82
587 1252 3.009473 ACTCATCTTGCCTTGGTATGTGT 59.991 43.478 0.00 0.00 0.00 3.72
588 1253 3.614092 ACTCATCTTGCCTTGGTATGTG 58.386 45.455 0.00 0.00 0.00 3.21
589 1254 4.307032 AACTCATCTTGCCTTGGTATGT 57.693 40.909 0.00 0.00 0.00 2.29
590 1255 6.949352 ATAAACTCATCTTGCCTTGGTATG 57.051 37.500 0.00 0.00 0.00 2.39
591 1256 7.502561 GGTTATAAACTCATCTTGCCTTGGTAT 59.497 37.037 0.00 0.00 0.00 2.73
592 1257 6.826741 GGTTATAAACTCATCTTGCCTTGGTA 59.173 38.462 0.00 0.00 0.00 3.25
593 1258 5.652452 GGTTATAAACTCATCTTGCCTTGGT 59.348 40.000 0.00 0.00 0.00 3.67
594 1259 5.888161 AGGTTATAAACTCATCTTGCCTTGG 59.112 40.000 0.00 0.00 0.00 3.61
595 1260 8.506168 TTAGGTTATAAACTCATCTTGCCTTG 57.494 34.615 6.23 0.00 0.00 3.61
615 1280 9.851686 ACATATGTGTGATGTCATTTATTAGGT 57.148 29.630 7.78 0.00 37.14 3.08
622 1287 9.453572 AGAAGTAACATATGTGTGATGTCATTT 57.546 29.630 9.63 0.00 38.92 2.32
623 1288 9.102757 GAGAAGTAACATATGTGTGATGTCATT 57.897 33.333 9.63 0.00 38.92 2.57
624 1289 8.260114 TGAGAAGTAACATATGTGTGATGTCAT 58.740 33.333 9.63 0.00 38.92 3.06
625 1290 7.610865 TGAGAAGTAACATATGTGTGATGTCA 58.389 34.615 9.63 8.17 38.92 3.58
626 1291 8.654230 ATGAGAAGTAACATATGTGTGATGTC 57.346 34.615 9.63 5.77 38.92 3.06
627 1292 8.886719 CAATGAGAAGTAACATATGTGTGATGT 58.113 33.333 9.63 0.00 38.92 3.06
628 1293 8.886719 ACAATGAGAAGTAACATATGTGTGATG 58.113 33.333 9.63 1.46 38.92 3.07
630 1295 9.586435 CTACAATGAGAAGTAACATATGTGTGA 57.414 33.333 9.63 0.00 38.92 3.58
631 1296 9.586435 TCTACAATGAGAAGTAACATATGTGTG 57.414 33.333 9.63 0.00 38.92 3.82
679 1344 4.906065 AGCCACAGTAAACATATGCATG 57.094 40.909 10.16 0.00 38.21 4.06
680 1345 5.684704 ACTAGCCACAGTAAACATATGCAT 58.315 37.500 3.79 3.79 0.00 3.96
681 1346 5.097742 ACTAGCCACAGTAAACATATGCA 57.902 39.130 1.58 0.00 0.00 3.96
682 1347 5.360591 AGACTAGCCACAGTAAACATATGC 58.639 41.667 1.58 0.00 0.00 3.14
685 1350 8.358148 GCTATAAGACTAGCCACAGTAAACATA 58.642 37.037 0.00 0.00 38.54 2.29
686 1351 7.210873 GCTATAAGACTAGCCACAGTAAACAT 58.789 38.462 0.00 0.00 38.54 2.71
687 1352 6.570692 GCTATAAGACTAGCCACAGTAAACA 58.429 40.000 0.00 0.00 38.54 2.83
688 1353 5.686397 CGCTATAAGACTAGCCACAGTAAAC 59.314 44.000 0.00 0.00 40.87 2.01
689 1354 5.735354 GCGCTATAAGACTAGCCACAGTAAA 60.735 44.000 0.00 0.00 40.87 2.01
690 1355 4.261489 GCGCTATAAGACTAGCCACAGTAA 60.261 45.833 0.00 0.00 40.87 2.24
691 1356 3.252701 GCGCTATAAGACTAGCCACAGTA 59.747 47.826 0.00 0.00 40.87 2.74
692 1357 2.034812 GCGCTATAAGACTAGCCACAGT 59.965 50.000 0.00 0.00 40.87 3.55
693 1358 2.034685 TGCGCTATAAGACTAGCCACAG 59.965 50.000 9.73 0.00 40.87 3.66
694 1359 2.028876 TGCGCTATAAGACTAGCCACA 58.971 47.619 9.73 0.00 40.87 4.17
695 1360 2.395654 GTGCGCTATAAGACTAGCCAC 58.604 52.381 9.73 8.11 40.87 5.01
696 1361 1.001706 CGTGCGCTATAAGACTAGCCA 60.002 52.381 9.73 0.00 40.87 4.75
697 1362 1.666311 CCGTGCGCTATAAGACTAGCC 60.666 57.143 9.73 0.00 40.87 3.93
698 1363 1.666311 CCCGTGCGCTATAAGACTAGC 60.666 57.143 9.73 0.00 40.61 3.42
699 1364 1.607628 ACCCGTGCGCTATAAGACTAG 59.392 52.381 9.73 0.00 0.00 2.57
700 1365 1.683943 ACCCGTGCGCTATAAGACTA 58.316 50.000 9.73 0.00 0.00 2.59
701 1366 0.822164 AACCCGTGCGCTATAAGACT 59.178 50.000 9.73 0.00 0.00 3.24
702 1367 1.326548 CAAACCCGTGCGCTATAAGAC 59.673 52.381 9.73 0.00 0.00 3.01
703 1368 1.647346 CAAACCCGTGCGCTATAAGA 58.353 50.000 9.73 0.00 0.00 2.10
704 1369 0.655733 CCAAACCCGTGCGCTATAAG 59.344 55.000 9.73 0.00 0.00 1.73
705 1370 0.745128 CCCAAACCCGTGCGCTATAA 60.745 55.000 9.73 0.00 0.00 0.98
706 1371 1.153329 CCCAAACCCGTGCGCTATA 60.153 57.895 9.73 0.00 0.00 1.31
707 1372 2.437716 CCCAAACCCGTGCGCTAT 60.438 61.111 9.73 0.00 0.00 2.97
708 1373 4.708386 CCCCAAACCCGTGCGCTA 62.708 66.667 9.73 0.00 0.00 4.26
711 1376 3.131478 GATCCCCAAACCCGTGCG 61.131 66.667 0.00 0.00 0.00 5.34
712 1377 2.754254 GGATCCCCAAACCCGTGC 60.754 66.667 0.00 0.00 0.00 5.34
713 1378 2.437716 CGGATCCCCAAACCCGTG 60.438 66.667 6.06 0.00 37.40 4.94
714 1379 2.608368 TCGGATCCCCAAACCCGT 60.608 61.111 6.06 0.00 42.34 5.28
715 1380 2.124860 GTCGGATCCCCAAACCCG 60.125 66.667 6.06 0.00 43.02 5.28
716 1381 2.124860 CGTCGGATCCCCAAACCC 60.125 66.667 6.06 0.00 0.00 4.11
717 1382 1.743995 CACGTCGGATCCCCAAACC 60.744 63.158 6.06 0.00 0.00 3.27
718 1383 1.743995 CCACGTCGGATCCCCAAAC 60.744 63.158 6.06 0.00 36.56 2.93
719 1384 2.666207 CCACGTCGGATCCCCAAA 59.334 61.111 6.06 0.00 36.56 3.28
720 1385 4.090588 GCCACGTCGGATCCCCAA 62.091 66.667 6.06 0.00 36.56 4.12
723 1388 4.530857 CTGGCCACGTCGGATCCC 62.531 72.222 0.00 0.00 36.56 3.85
795 1460 0.773644 ACTGGCCCAGAACTCACATT 59.226 50.000 19.90 0.00 35.18 2.71
796 1461 0.773644 AACTGGCCCAGAACTCACAT 59.226 50.000 19.90 0.00 35.18 3.21
884 1581 2.535984 CACGAATCTTGACGCAGGATAC 59.464 50.000 5.23 0.00 30.08 2.24
885 1582 2.809446 CACGAATCTTGACGCAGGATA 58.191 47.619 5.23 0.00 30.08 2.59
920 1617 0.462581 GCAGCGATCCACCATCTTCA 60.463 55.000 0.00 0.00 0.00 3.02
929 1627 0.461548 AGAGATTTCGCAGCGATCCA 59.538 50.000 20.32 6.31 35.23 3.41
964 1664 8.832735 AGATTTTGGGGAAGTACTATTAACTGA 58.167 33.333 0.00 0.00 0.00 3.41
974 1674 3.007635 CGGTGAGATTTTGGGGAAGTAC 58.992 50.000 0.00 0.00 0.00 2.73
975 1675 2.907696 TCGGTGAGATTTTGGGGAAGTA 59.092 45.455 0.00 0.00 0.00 2.24
976 1676 1.702957 TCGGTGAGATTTTGGGGAAGT 59.297 47.619 0.00 0.00 0.00 3.01
977 1677 2.488153 GTTCGGTGAGATTTTGGGGAAG 59.512 50.000 0.00 0.00 0.00 3.46
1119 1831 1.740664 CTCGAGGGACAGACGACGA 60.741 63.158 3.91 0.00 32.72 4.20
1120 1832 1.296755 TTCTCGAGGGACAGACGACG 61.297 60.000 13.56 0.00 32.72 5.12
1121 1833 1.064357 GATTCTCGAGGGACAGACGAC 59.936 57.143 13.56 0.00 32.72 4.34
1171 1902 1.760875 CCGCTTCCCCACTAGCCTA 60.761 63.158 0.00 0.00 33.86 3.93
1237 1968 2.103771 GAGGTCTTGCTGATGGCTGATA 59.896 50.000 0.00 0.00 42.39 2.15
1257 1988 4.362677 GCATATATACCTTGGAGGGAGGA 58.637 47.826 0.00 0.00 40.58 3.71
1265 1996 2.355756 GGCATGCGCATATATACCTTGG 59.644 50.000 24.84 7.65 41.24 3.61
1284 2015 2.102420 GGCAGTTTATTGGGTAATGGGC 59.898 50.000 0.00 0.00 0.00 5.36
1300 2031 3.214328 ACTCGTCAAAAATTCTGGCAGT 58.786 40.909 15.27 0.00 0.00 4.40
1323 2054 8.916062 AGCCAACAAATATGATTGAATATCACA 58.084 29.630 0.00 0.00 34.38 3.58
1365 2096 2.735772 ATCGATTCGCACAGGGGCT 61.736 57.895 0.00 0.00 0.00 5.19
1371 2102 2.682836 TCTTCAACATCGATTCGCACA 58.317 42.857 0.00 0.00 0.00 4.57
1380 2111 4.297510 TGCCACAAAAATCTTCAACATCG 58.702 39.130 0.00 0.00 0.00 3.84
1410 2157 7.615582 AATATGACTTGAATACCACACACTG 57.384 36.000 0.00 0.00 0.00 3.66
1411 2158 8.635765 AAAATATGACTTGAATACCACACACT 57.364 30.769 0.00 0.00 0.00 3.55
1412 2159 9.128107 CAAAAATATGACTTGAATACCACACAC 57.872 33.333 0.00 0.00 0.00 3.82
1413 2160 7.812191 GCAAAAATATGACTTGAATACCACACA 59.188 33.333 0.00 0.00 0.00 3.72
1414 2161 7.812191 TGCAAAAATATGACTTGAATACCACAC 59.188 33.333 0.00 0.00 0.00 3.82
1415 2162 7.890515 TGCAAAAATATGACTTGAATACCACA 58.109 30.769 0.00 0.00 0.00 4.17
1416 2163 8.755696 TTGCAAAAATATGACTTGAATACCAC 57.244 30.769 0.00 0.00 0.00 4.16
1417 2164 9.585099 GATTGCAAAAATATGACTTGAATACCA 57.415 29.630 1.71 0.00 0.00 3.25
1418 2165 9.034544 GGATTGCAAAAATATGACTTGAATACC 57.965 33.333 1.71 0.00 0.00 2.73
1419 2166 9.585099 TGGATTGCAAAAATATGACTTGAATAC 57.415 29.630 1.71 0.00 0.00 1.89
1421 2168 9.104965 CATGGATTGCAAAAATATGACTTGAAT 57.895 29.630 1.71 0.00 0.00 2.57
1422 2169 8.095792 ACATGGATTGCAAAAATATGACTTGAA 58.904 29.630 17.58 0.00 0.00 2.69
1423 2170 7.613585 ACATGGATTGCAAAAATATGACTTGA 58.386 30.769 17.58 0.00 0.00 3.02
1424 2171 7.837202 ACATGGATTGCAAAAATATGACTTG 57.163 32.000 17.58 8.05 0.00 3.16
1425 2172 7.334921 CCAACATGGATTGCAAAAATATGACTT 59.665 33.333 17.58 5.45 40.96 3.01
1426 2173 6.819649 CCAACATGGATTGCAAAAATATGACT 59.180 34.615 17.58 6.61 40.96 3.41
1427 2174 6.457257 GCCAACATGGATTGCAAAAATATGAC 60.457 38.462 17.58 5.93 40.96 3.06
1428 2175 5.585445 GCCAACATGGATTGCAAAAATATGA 59.415 36.000 17.58 0.00 40.96 2.15
1429 2176 5.354513 TGCCAACATGGATTGCAAAAATATG 59.645 36.000 1.71 8.81 40.96 1.78
1430 2177 5.498393 TGCCAACATGGATTGCAAAAATAT 58.502 33.333 1.71 0.00 40.96 1.28
1431 2178 4.903054 TGCCAACATGGATTGCAAAAATA 58.097 34.783 1.71 0.00 40.96 1.40
1432 2179 3.752665 TGCCAACATGGATTGCAAAAAT 58.247 36.364 1.71 0.00 40.96 1.82
1433 2180 3.204306 TGCCAACATGGATTGCAAAAA 57.796 38.095 1.71 0.00 40.96 1.94
1434 2181 2.924757 TGCCAACATGGATTGCAAAA 57.075 40.000 1.71 0.00 40.96 2.44
1435 2182 4.443621 CATATGCCAACATGGATTGCAAA 58.556 39.130 1.71 0.00 40.96 3.68
1436 2183 3.741700 GCATATGCCAACATGGATTGCAA 60.742 43.478 17.26 0.00 40.96 4.08
1437 2184 2.224090 GCATATGCCAACATGGATTGCA 60.224 45.455 17.26 0.45 40.96 4.08
1438 2185 2.036733 AGCATATGCCAACATGGATTGC 59.963 45.455 23.96 3.35 40.96 3.56
1439 2186 4.330944 AAGCATATGCCAACATGGATTG 57.669 40.909 23.96 0.00 40.96 2.67
1440 2187 4.699637 CAAAGCATATGCCAACATGGATT 58.300 39.130 23.96 5.68 40.96 3.01
1441 2188 3.493699 GCAAAGCATATGCCAACATGGAT 60.494 43.478 23.96 0.00 40.96 3.41
1442 2189 2.159071 GCAAAGCATATGCCAACATGGA 60.159 45.455 23.96 0.00 40.96 3.41
1443 2190 2.159014 AGCAAAGCATATGCCAACATGG 60.159 45.455 23.96 8.18 44.91 3.66
1444 2191 2.863740 CAGCAAAGCATATGCCAACATG 59.136 45.455 23.96 15.68 44.91 3.21
1445 2192 2.740580 GCAGCAAAGCATATGCCAACAT 60.741 45.455 23.96 1.96 44.91 2.71
1446 2193 1.404449 GCAGCAAAGCATATGCCAACA 60.404 47.619 23.96 0.00 44.91 3.33
1447 2194 1.134907 AGCAGCAAAGCATATGCCAAC 60.135 47.619 23.96 11.32 44.91 3.77
1448 2195 1.134936 CAGCAGCAAAGCATATGCCAA 60.135 47.619 23.96 0.00 44.91 4.52
1449 2196 0.458260 CAGCAGCAAAGCATATGCCA 59.542 50.000 23.96 0.00 44.91 4.92
1450 2197 0.458669 ACAGCAGCAAAGCATATGCC 59.541 50.000 23.96 8.78 44.91 4.40
1451 2198 1.404391 AGACAGCAGCAAAGCATATGC 59.596 47.619 20.36 20.36 44.15 3.14
1452 2199 2.681344 TCAGACAGCAGCAAAGCATATG 59.319 45.455 0.00 0.00 36.85 1.78
1453 2200 2.995283 TCAGACAGCAGCAAAGCATAT 58.005 42.857 0.00 0.00 36.85 1.78
1454 2201 2.477845 TCAGACAGCAGCAAAGCATA 57.522 45.000 0.00 0.00 36.85 3.14
1455 2202 1.612676 TTCAGACAGCAGCAAAGCAT 58.387 45.000 0.00 0.00 36.85 3.79
1456 2203 1.391577 TTTCAGACAGCAGCAAAGCA 58.608 45.000 0.00 0.00 36.85 3.91
1457 2204 2.719426 ATTTCAGACAGCAGCAAAGC 57.281 45.000 0.00 0.00 0.00 3.51
1458 2205 3.734231 CACAATTTCAGACAGCAGCAAAG 59.266 43.478 0.00 0.00 0.00 2.77
1459 2206 3.130869 ACACAATTTCAGACAGCAGCAAA 59.869 39.130 0.00 0.00 0.00 3.68
1460 2207 2.689471 ACACAATTTCAGACAGCAGCAA 59.311 40.909 0.00 0.00 0.00 3.91
1471 2218 6.083098 ACAAAATCCATCGACACAATTTCA 57.917 33.333 0.00 0.00 0.00 2.69
1478 2225 3.281341 TGCAACAAAATCCATCGACAC 57.719 42.857 0.00 0.00 0.00 3.67
1482 2229 3.577667 ACACATGCAACAAAATCCATCG 58.422 40.909 0.00 0.00 0.00 3.84
1504 2251 7.435305 TGTTGTGTTCATGATTTGAATGTCAT 58.565 30.769 0.00 0.00 45.77 3.06
1507 2254 6.698329 CACTGTTGTGTTCATGATTTGAATGT 59.302 34.615 0.00 0.00 45.77 2.71
1523 2270 5.714047 TGAAGACTAGCTATCACTGTTGTG 58.286 41.667 0.00 0.00 45.07 3.33
1649 2398 1.065410 TTGGCCTTCCTTCTGGGTGA 61.065 55.000 3.32 0.00 36.25 4.02
1659 2408 2.601367 TTGCAGCCTTGGCCTTCC 60.601 61.111 3.32 0.00 0.00 3.46
1722 2486 3.972276 GCTTTTGGGCGGACGCAA 61.972 61.111 18.95 2.07 45.96 4.85
1786 2551 3.118629 TGGGAGTTAGCAGCAACTAGATG 60.119 47.826 9.41 0.00 38.86 2.90
1804 2570 1.219664 CCTTCGCACGGTATTGGGA 59.780 57.895 0.00 0.00 36.71 4.37
1834 2600 3.551846 CACCTACACAAAGACCAAACCT 58.448 45.455 0.00 0.00 0.00 3.50
2017 2795 3.321968 GGTTTTAGGGGATGAATGGATGC 59.678 47.826 0.00 0.00 0.00 3.91
2058 2836 2.482721 CTGGTTTCACCCAACATCGTAC 59.517 50.000 0.00 0.00 37.50 3.67
2272 3055 1.066143 ACCTCCCTGCATTAACACTCG 60.066 52.381 0.00 0.00 0.00 4.18
2415 3720 6.857964 ACTCACGAAGAACAAATTGCATTAAG 59.142 34.615 0.00 0.00 0.00 1.85
2431 3736 6.574350 AGATGGAAATACCTAACTCACGAAG 58.426 40.000 0.00 0.00 39.86 3.79
2446 3751 5.163478 GCCAAAGCATTACAGAGATGGAAAT 60.163 40.000 0.00 0.00 39.53 2.17
2504 3809 5.950758 AACGGTTGCAATGTACAAATCTA 57.049 34.783 0.59 0.00 0.00 1.98
2520 3825 6.848451 ACAAAATAATATCTGCGAAACGGTT 58.152 32.000 0.00 0.00 0.00 4.44
2523 3828 8.120465 AGGTTACAAAATAATATCTGCGAAACG 58.880 33.333 0.00 0.00 0.00 3.60
2528 3833 9.042008 AGTACAGGTTACAAAATAATATCTGCG 57.958 33.333 0.00 0.00 0.00 5.18
2636 3943 5.584551 AGTCTGAAGGTTTTACCAAGGAT 57.415 39.130 0.00 0.00 41.95 3.24
2672 3982 5.105310 AGCGAATACACAAGTTCTATGGTCT 60.105 40.000 0.00 0.00 0.00 3.85
2820 4133 1.604438 CGTTGTTGATCCGAGTCACCA 60.604 52.381 0.00 0.00 0.00 4.17
2963 4279 1.159285 GCACTATGTCTGCTTGCACA 58.841 50.000 0.00 0.00 33.24 4.57
2999 4315 9.173939 GTTTCAACTACAGAAAGATGTTCAATG 57.826 33.333 0.00 0.00 35.81 2.82
3035 4351 8.375465 GTTTTATTGAAAGATCCATTTCTTGCG 58.625 33.333 8.43 0.00 39.45 4.85
3050 4366 5.837437 ACGTTGGCATGAGTTTTATTGAAA 58.163 33.333 0.00 0.00 0.00 2.69
3054 4370 7.119992 TGTGTATACGTTGGCATGAGTTTTATT 59.880 33.333 0.00 0.00 0.00 1.40
3079 4395 7.041721 TCACCTACTAGCTAATGACAAATGTG 58.958 38.462 0.00 0.00 0.00 3.21
3093 4409 7.222000 AGTATAAGCAGAATCACCTACTAGC 57.778 40.000 0.00 0.00 0.00 3.42
3175 4493 6.839124 ATAATTCTTGATGAGCACCACAAA 57.161 33.333 0.00 0.00 0.00 2.83
3553 4894 5.989168 TCCTGACGGTGCATTACATATTAAG 59.011 40.000 0.00 0.00 0.00 1.85
3746 5108 3.003394 TCAGGCATCGTTCCAATGAAT 57.997 42.857 0.00 0.00 31.98 2.57
3973 5346 9.310449 GATGGAGGGAGTAACATATAAGAAGTA 57.690 37.037 0.00 0.00 0.00 2.24
3987 5360 2.912956 GCATTATGGGATGGAGGGAGTA 59.087 50.000 0.00 0.00 0.00 2.59
3988 5361 1.707427 GCATTATGGGATGGAGGGAGT 59.293 52.381 0.00 0.00 0.00 3.85
3989 5362 1.706866 TGCATTATGGGATGGAGGGAG 59.293 52.381 0.00 0.00 0.00 4.30
3990 5363 1.831835 TGCATTATGGGATGGAGGGA 58.168 50.000 0.00 0.00 0.00 4.20
3991 5364 2.108776 TCTTGCATTATGGGATGGAGGG 59.891 50.000 0.00 0.00 0.00 4.30
3992 5365 3.152341 GTCTTGCATTATGGGATGGAGG 58.848 50.000 0.00 0.00 0.00 4.30
3993 5366 2.810274 CGTCTTGCATTATGGGATGGAG 59.190 50.000 0.00 0.00 0.00 3.86
3994 5367 2.172505 ACGTCTTGCATTATGGGATGGA 59.827 45.455 0.00 0.00 0.00 3.41
3995 5368 2.291465 CACGTCTTGCATTATGGGATGG 59.709 50.000 0.00 0.00 0.00 3.51
3996 5369 2.945008 ACACGTCTTGCATTATGGGATG 59.055 45.455 0.00 0.00 0.00 3.51
3997 5370 3.281727 ACACGTCTTGCATTATGGGAT 57.718 42.857 0.00 0.00 0.00 3.85
3998 5371 2.779755 ACACGTCTTGCATTATGGGA 57.220 45.000 0.00 0.00 0.00 4.37
3999 5372 3.848272 AAACACGTCTTGCATTATGGG 57.152 42.857 0.00 0.00 0.00 4.00
4000 5373 3.919804 CCAAAACACGTCTTGCATTATGG 59.080 43.478 0.00 0.00 0.00 2.74
4001 5374 3.364621 GCCAAAACACGTCTTGCATTATG 59.635 43.478 0.00 0.00 0.00 1.90
4002 5375 3.574614 GCCAAAACACGTCTTGCATTAT 58.425 40.909 0.00 0.00 0.00 1.28
4003 5376 2.287909 GGCCAAAACACGTCTTGCATTA 60.288 45.455 0.00 0.00 0.00 1.90
4004 5377 1.537990 GGCCAAAACACGTCTTGCATT 60.538 47.619 0.00 0.00 0.00 3.56
4005 5378 0.031994 GGCCAAAACACGTCTTGCAT 59.968 50.000 0.00 0.00 0.00 3.96
4006 5379 1.435515 GGCCAAAACACGTCTTGCA 59.564 52.632 0.00 0.00 0.00 4.08
4007 5380 1.299850 GGGCCAAAACACGTCTTGC 60.300 57.895 4.39 0.00 0.00 4.01
4008 5381 1.265905 GTAGGGCCAAAACACGTCTTG 59.734 52.381 6.18 0.00 0.00 3.02
4009 5382 1.134037 TGTAGGGCCAAAACACGTCTT 60.134 47.619 6.18 0.00 0.00 3.01
4010 5383 0.470766 TGTAGGGCCAAAACACGTCT 59.529 50.000 6.18 0.00 0.00 4.18
4011 5384 0.589708 GTGTAGGGCCAAAACACGTC 59.410 55.000 17.39 0.61 34.72 4.34
4012 5385 0.181824 AGTGTAGGGCCAAAACACGT 59.818 50.000 22.83 13.38 46.33 4.49
4013 5386 2.073816 CTAGTGTAGGGCCAAAACACG 58.926 52.381 22.83 11.81 46.33 4.49
4014 5387 2.812011 CACTAGTGTAGGGCCAAAACAC 59.188 50.000 22.11 22.11 43.02 3.32
4015 5388 3.134574 CACTAGTGTAGGGCCAAAACA 57.865 47.619 15.06 4.04 0.00 2.83
4039 5412 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
4040 5413 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
4041 5414 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
4042 5415 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
4043 5416 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
4045 5418 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
4046 5419 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
4047 5420 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
4048 5421 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
4049 5422 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
4050 5423 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
4051 5424 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
4052 5425 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
4053 5426 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
4054 5427 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
4055 5428 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
4056 5429 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
4057 5430 1.206610 GAAAACTACTCCCTCCGTCCC 59.793 57.143 0.00 0.00 0.00 4.46
4058 5431 1.897802 TGAAAACTACTCCCTCCGTCC 59.102 52.381 0.00 0.00 0.00 4.79
4059 5432 3.889520 ATGAAAACTACTCCCTCCGTC 57.110 47.619 0.00 0.00 0.00 4.79
4060 5433 4.776308 AGTAATGAAAACTACTCCCTCCGT 59.224 41.667 0.00 0.00 0.00 4.69
4061 5434 5.105473 TCAGTAATGAAAACTACTCCCTCCG 60.105 44.000 0.00 0.00 0.00 4.63
4062 5435 6.070710 AGTCAGTAATGAAAACTACTCCCTCC 60.071 42.308 0.00 0.00 0.00 4.30
4063 5436 6.814146 CAGTCAGTAATGAAAACTACTCCCTC 59.186 42.308 0.00 0.00 0.00 4.30
4064 5437 6.497259 TCAGTCAGTAATGAAAACTACTCCCT 59.503 38.462 0.00 0.00 0.00 4.20
4065 5438 6.698380 TCAGTCAGTAATGAAAACTACTCCC 58.302 40.000 0.00 0.00 0.00 4.30
4066 5439 8.035394 TGATCAGTCAGTAATGAAAACTACTCC 58.965 37.037 0.00 0.00 0.00 3.85
4067 5440 8.988064 TGATCAGTCAGTAATGAAAACTACTC 57.012 34.615 0.00 0.00 0.00 2.59
4068 5441 9.950496 AATGATCAGTCAGTAATGAAAACTACT 57.050 29.630 0.09 0.00 37.87 2.57
4097 5471 6.371809 TTTCTACACCATTGTGAGAACAAC 57.628 37.500 3.55 0.00 45.76 3.32
4100 5478 6.349363 GGGAATTTCTACACCATTGTGAGAAC 60.349 42.308 3.55 0.00 45.76 3.01
4101 5479 5.710099 GGGAATTTCTACACCATTGTGAGAA 59.290 40.000 3.55 5.95 45.76 2.87
4102 5480 5.253330 GGGAATTTCTACACCATTGTGAGA 58.747 41.667 3.55 0.09 45.76 3.27
4103 5481 4.094887 CGGGAATTTCTACACCATTGTGAG 59.905 45.833 3.55 0.00 45.76 3.51
4397 5775 0.108207 AGAGCTGCAGCAACTGAAGT 59.892 50.000 38.24 17.06 39.27 3.01
4456 5834 1.486310 ACAGGAGTGCAGAGTTTGTGA 59.514 47.619 0.00 0.00 0.00 3.58
4480 5858 3.251729 AGACTGCAGCAAACAACATGTAG 59.748 43.478 15.27 0.00 0.00 2.74
4544 5922 3.492656 GGCAATATGAAGGACGTCAGCTA 60.493 47.826 18.91 0.83 0.00 3.32
4827 6211 6.615264 AGCATACTGAGCAATAGATTTGTG 57.385 37.500 0.00 0.00 0.00 3.33
4830 6217 6.373774 GCCATAGCATACTGAGCAATAGATTT 59.626 38.462 0.00 0.00 39.53 2.17
4859 6246 4.378459 CGAAATAAGGAAACAGAGGCACAC 60.378 45.833 0.00 0.00 0.00 3.82
4865 6252 8.535690 AACTAGTTCGAAATAAGGAAACAGAG 57.464 34.615 6.79 0.00 0.00 3.35
4867 6254 8.306680 TGAACTAGTTCGAAATAAGGAAACAG 57.693 34.615 26.35 0.00 42.28 3.16
4905 6292 2.730550 AGGGCAGCAAAATTTTCGAG 57.269 45.000 0.00 0.00 0.00 4.04
4912 6299 5.488262 AACAAAAGATAGGGCAGCAAAAT 57.512 34.783 0.00 0.00 0.00 1.82
5013 6401 8.321353 TCTTCATTAGAACCAGCTCTAAATCAA 58.679 33.333 0.00 0.00 40.42 2.57
5198 6586 3.198068 CAGCGTGCCTACATAACTCAAT 58.802 45.455 0.00 0.00 0.00 2.57
5306 6715 1.017177 GCAAACATAGGACGACCGCA 61.017 55.000 0.00 0.00 41.83 5.69
5460 6879 9.702494 ATATAATCGGTAAGTTGTTAGTAAGCC 57.298 33.333 0.00 0.00 0.00 4.35
5588 7008 3.846360 ACATGAGTAACTAGTTCGTGCC 58.154 45.455 12.39 0.00 32.42 5.01
5702 7126 9.946165 GCAAGTACTACTTTACAAGAAAAATGT 57.054 29.630 0.00 0.00 36.03 2.71
5733 7157 1.133181 TCAGGGATTGGAGGTGTGCA 61.133 55.000 0.00 0.00 0.00 4.57
5741 7165 1.635487 CCAACCTTCTCAGGGATTGGA 59.365 52.381 5.15 0.00 46.01 3.53
5747 7171 0.610232 CAAGCCCAACCTTCTCAGGG 60.610 60.000 0.00 0.00 46.01 4.45
5768 7192 1.207329 AGAGGCGGTGGAATAAGACAC 59.793 52.381 0.00 0.00 36.89 3.67
5770 7194 1.757699 AGAGAGGCGGTGGAATAAGAC 59.242 52.381 0.00 0.00 0.00 3.01
5869 7295 8.879427 AGCCCTTGATTAATACTGTAGTTTTT 57.121 30.769 0.00 0.00 0.00 1.94
5870 7296 9.392259 GTAGCCCTTGATTAATACTGTAGTTTT 57.608 33.333 0.00 0.00 0.00 2.43
5871 7297 7.709613 CGTAGCCCTTGATTAATACTGTAGTTT 59.290 37.037 0.00 0.00 0.00 2.66
5872 7298 7.069085 TCGTAGCCCTTGATTAATACTGTAGTT 59.931 37.037 0.00 0.00 0.00 2.24
5873 7299 6.548622 TCGTAGCCCTTGATTAATACTGTAGT 59.451 38.462 0.00 0.00 0.00 2.73
5874 7300 6.978338 TCGTAGCCCTTGATTAATACTGTAG 58.022 40.000 0.00 0.00 0.00 2.74
5875 7301 6.964807 TCGTAGCCCTTGATTAATACTGTA 57.035 37.500 0.00 0.00 0.00 2.74
5876 7302 5.864418 TCGTAGCCCTTGATTAATACTGT 57.136 39.130 0.00 0.00 0.00 3.55
5877 7303 7.116948 CAGAATCGTAGCCCTTGATTAATACTG 59.883 40.741 0.00 0.00 32.74 2.74
5878 7304 7.015292 TCAGAATCGTAGCCCTTGATTAATACT 59.985 37.037 0.00 0.00 32.74 2.12
5879 7305 7.152645 TCAGAATCGTAGCCCTTGATTAATAC 58.847 38.462 0.00 0.00 32.74 1.89
5915 7543 6.017933 CGCTCAGATTAGAACAAACATTCAC 58.982 40.000 0.00 0.00 0.00 3.18
5916 7544 5.700832 ACGCTCAGATTAGAACAAACATTCA 59.299 36.000 0.00 0.00 0.00 2.57
5920 7548 5.534407 TGTACGCTCAGATTAGAACAAACA 58.466 37.500 0.00 0.00 0.00 2.83
5921 7549 6.531948 AGATGTACGCTCAGATTAGAACAAAC 59.468 38.462 0.00 0.00 0.00 2.93
5925 7553 6.017440 AGAGAGATGTACGCTCAGATTAGAAC 60.017 42.308 15.36 0.00 45.53 3.01
5928 7556 5.700832 AGAGAGAGATGTACGCTCAGATTAG 59.299 44.000 15.36 0.00 45.53 1.73
6038 7755 1.106944 ACACGGGGAAGTTTTGCCAG 61.107 55.000 1.80 0.13 43.95 4.85
6050 7767 2.091541 AGCATATGAACAAACACGGGG 58.908 47.619 6.97 0.00 0.00 5.73
6207 7953 1.625315 CCATAGATCCTCAATCCGGCA 59.375 52.381 0.00 0.00 34.67 5.69
6225 7972 4.887071 GCATGTGACCATTAGAATTACCCA 59.113 41.667 0.00 0.00 0.00 4.51
6254 8002 2.125512 GCGAAGATGGTCTGCGGT 60.126 61.111 9.22 0.00 45.51 5.68
6259 8007 2.125512 GGCACGCGAAGATGGTCT 60.126 61.111 15.93 0.00 0.00 3.85
6277 8025 2.399356 GCAGTAAAGACCTGGCCGC 61.399 63.158 0.00 0.00 0.00 6.53
6285 8033 1.810030 CGGCCGAGGCAGTAAAGAC 60.810 63.158 24.07 0.00 44.11 3.01
6350 8098 1.284111 ATGAAGCATGCAGGGGAGGA 61.284 55.000 21.98 0.00 0.00 3.71
6369 8117 4.517075 TGAAAAGCGAATATCACACACCAA 59.483 37.500 0.00 0.00 0.00 3.67
6387 8135 4.782019 ATAAATGGAGCAAGCGTGAAAA 57.218 36.364 2.99 0.00 0.00 2.29
6388 8136 4.484236 CAATAAATGGAGCAAGCGTGAAA 58.516 39.130 2.99 0.00 0.00 2.69
6414 8162 9.678260 ATCTTTCAGAAAGCTTATGATAGTTGT 57.322 29.630 17.04 12.20 38.39 3.32
6424 8172 9.618890 ACATAATAGCATCTTTCAGAAAGCTTA 57.381 29.630 17.04 1.90 39.38 3.09
6527 8275 2.740981 GACACTTCTGATGTGCTCCAAG 59.259 50.000 19.90 0.00 38.86 3.61
6537 8285 0.036952 CCTGGCACGACACTTCTGAT 60.037 55.000 0.00 0.00 0.00 2.90
6634 8382 4.944962 TTTGAGTATCTTGTGAATGGCG 57.055 40.909 0.00 0.00 34.92 5.69
6694 8443 3.307782 AGTTAAGAAACACGACACAACCG 59.692 43.478 0.00 0.00 38.12 4.44
6703 8452 3.064931 GGAGTGGGAGTTAAGAAACACG 58.935 50.000 0.00 0.00 38.12 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.