Multiple sequence alignment - TraesCS6B01G321000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G321000 chr6B 100.000 2861 0 0 1 2861 568188763 568191623 0.000000e+00 5284
1 TraesCS6B01G321000 chr6B 85.366 205 19 10 389 584 568463486 568463284 4.830000e-48 202
2 TraesCS6B01G321000 chr2B 98.841 2157 25 0 607 2763 571946215 571948371 0.000000e+00 3845
3 TraesCS6B01G321000 chr2B 95.604 91 4 0 2771 2861 470032441 470032351 2.300000e-31 147
4 TraesCS6B01G321000 chr1B 98.841 2157 23 2 607 2763 322392626 322394780 0.000000e+00 3843
5 TraesCS6B01G321000 chr1B 97.802 91 2 0 2771 2861 322397538 322397628 1.060000e-34 158
6 TraesCS6B01G321000 chr1B 92.391 92 3 3 2771 2861 30537304 30537392 8.320000e-26 128
7 TraesCS6B01G321000 chr7A 98.795 2157 26 0 607 2763 345261292 345263448 0.000000e+00 3840
8 TraesCS6B01G321000 chr7A 97.802 91 2 0 2771 2861 345268867 345268957 1.060000e-34 158
9 TraesCS6B01G321000 chr3A 98.566 2162 26 3 607 2763 457924736 457926897 0.000000e+00 3816
10 TraesCS6B01G321000 chr3A 97.657 2177 28 5 607 2763 11577136 11579309 0.000000e+00 3716
11 TraesCS6B01G321000 chr3A 96.703 91 3 0 2771 2861 11583685 11583775 4.940000e-33 152
12 TraesCS6B01G321000 chr3A 95.556 90 4 0 2771 2860 457930748 457930837 8.260000e-31 145
13 TraesCS6B01G321000 chr1A 97.460 2126 33 2 638 2763 113882216 113884320 0.000000e+00 3607
14 TraesCS6B01G321000 chr1A 97.778 90 2 0 2771 2860 113887550 113887639 3.820000e-34 156
15 TraesCS6B01G321000 chr3B 95.111 2168 78 15 616 2763 139621351 139623510 0.000000e+00 3391
16 TraesCS6B01G321000 chr4A 97.674 1978 27 1 805 2763 705572674 705570697 0.000000e+00 3380
17 TraesCS6B01G321000 chr4A 98.901 91 1 0 2771 2861 705553397 705553307 2.280000e-36 163
18 TraesCS6B01G321000 chr4A 92.391 92 3 3 2771 2861 3260254 3260342 8.320000e-26 128
19 TraesCS6B01G321000 chr4B 98.787 1484 17 1 607 2089 134586678 134585195 0.000000e+00 2639
20 TraesCS6B01G321000 chr4B 99.246 663 5 0 2101 2763 134585244 134584582 0.000000e+00 1197
21 TraesCS6B01G321000 chr6A 87.925 265 20 5 353 605 522203951 522204215 4.630000e-78 302
22 TraesCS6B01G321000 chr6A 84.804 204 22 7 387 584 522274147 522273947 2.250000e-46 196
23 TraesCS6B01G321000 chr6D 83.154 279 19 8 356 607 380782082 380782359 2.220000e-56 230
24 TraesCS6B01G321000 chr6D 87.081 209 14 8 387 584 380932500 380932294 1.030000e-54 224


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G321000 chr6B 568188763 568191623 2860 False 5284.0 5284 100.0000 1 2861 1 chr6B.!!$F1 2860
1 TraesCS6B01G321000 chr2B 571946215 571948371 2156 False 3845.0 3845 98.8410 607 2763 1 chr2B.!!$F1 2156
2 TraesCS6B01G321000 chr1B 322392626 322397628 5002 False 2000.5 3843 98.3215 607 2861 2 chr1B.!!$F2 2254
3 TraesCS6B01G321000 chr7A 345261292 345263448 2156 False 3840.0 3840 98.7950 607 2763 1 chr7A.!!$F1 2156
4 TraesCS6B01G321000 chr3A 11577136 11579309 2173 False 3716.0 3716 97.6570 607 2763 1 chr3A.!!$F1 2156
5 TraesCS6B01G321000 chr3A 457924736 457930837 6101 False 1980.5 3816 97.0610 607 2860 2 chr3A.!!$F3 2253
6 TraesCS6B01G321000 chr1A 113882216 113887639 5423 False 1881.5 3607 97.6190 638 2860 2 chr1A.!!$F1 2222
7 TraesCS6B01G321000 chr3B 139621351 139623510 2159 False 3391.0 3391 95.1110 616 2763 1 chr3B.!!$F1 2147
8 TraesCS6B01G321000 chr4A 705570697 705572674 1977 True 3380.0 3380 97.6740 805 2763 1 chr4A.!!$R2 1958
9 TraesCS6B01G321000 chr4B 134584582 134586678 2096 True 1918.0 2639 99.0165 607 2763 2 chr4B.!!$R1 2156


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
75 76 0.034186 AATTGAGCCAAGGGATGCGA 60.034 50.0 0.0 0.0 0.00 5.10 F
226 227 0.036577 CAGACAAGGGGAGTGCTGAG 60.037 60.0 0.0 0.0 0.00 3.35 F
378 379 0.100682 GTTGCTGAGCGTCGGAGATA 59.899 55.0 0.0 0.0 40.67 1.98 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1153 1157 0.684479 TCCATGTAGCGCACCTCTCT 60.684 55.000 11.47 0.0 0.00 3.10 R
1608 1616 1.005215 CTCCCCTGCCATTCTTTGTCT 59.995 52.381 0.00 0.0 0.00 3.41 R
2065 2085 5.761165 TTCAGTTAAGTAAACAAGCCACC 57.239 39.130 0.00 0.0 40.83 4.61 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.818141 CATTCCTCTTTTTCCTTTTCCTTTAC 57.182 34.615 0.00 0.00 0.00 2.01
26 27 6.628919 TCCTCTTTTTCCTTTTCCTTTACG 57.371 37.500 0.00 0.00 0.00 3.18
27 28 5.009310 TCCTCTTTTTCCTTTTCCTTTACGC 59.991 40.000 0.00 0.00 0.00 4.42
28 29 5.221165 CCTCTTTTTCCTTTTCCTTTACGCA 60.221 40.000 0.00 0.00 0.00 5.24
29 30 5.827666 TCTTTTTCCTTTTCCTTTACGCAG 58.172 37.500 0.00 0.00 0.00 5.18
30 31 4.577834 TTTTCCTTTTCCTTTACGCAGG 57.422 40.909 0.00 0.00 34.86 4.85
31 32 1.530323 TCCTTTTCCTTTACGCAGGC 58.470 50.000 0.00 0.00 33.35 4.85
32 33 0.168128 CCTTTTCCTTTACGCAGGCG 59.832 55.000 12.71 12.71 46.03 5.52
45 46 3.034406 CGCAGGCGTTAACTTAACATC 57.966 47.619 5.34 3.68 38.57 3.06
46 47 2.222953 CGCAGGCGTTAACTTAACATCC 60.223 50.000 5.34 10.67 38.57 3.51
47 48 2.745281 GCAGGCGTTAACTTAACATCCA 59.255 45.455 16.38 0.00 38.57 3.41
48 49 3.377172 GCAGGCGTTAACTTAACATCCAT 59.623 43.478 16.38 1.35 38.57 3.41
49 50 4.730613 GCAGGCGTTAACTTAACATCCATG 60.731 45.833 16.38 10.84 38.57 3.66
50 51 4.634004 CAGGCGTTAACTTAACATCCATGA 59.366 41.667 16.38 0.00 38.57 3.07
51 52 5.123186 CAGGCGTTAACTTAACATCCATGAA 59.877 40.000 16.38 0.00 38.57 2.57
52 53 5.885912 AGGCGTTAACTTAACATCCATGAAT 59.114 36.000 16.38 0.00 38.57 2.57
53 54 7.011950 CAGGCGTTAACTTAACATCCATGAATA 59.988 37.037 16.38 0.00 38.57 1.75
54 55 7.719633 AGGCGTTAACTTAACATCCATGAATAT 59.280 33.333 16.38 0.00 38.57 1.28
55 56 8.995220 GGCGTTAACTTAACATCCATGAATATA 58.005 33.333 11.40 0.00 38.57 0.86
65 66 8.481492 AACATCCATGAATATAAATTGAGCCA 57.519 30.769 0.00 0.00 0.00 4.75
66 67 8.481492 ACATCCATGAATATAAATTGAGCCAA 57.519 30.769 0.00 0.00 0.00 4.52
67 68 8.582437 ACATCCATGAATATAAATTGAGCCAAG 58.418 33.333 0.00 0.00 0.00 3.61
68 69 7.528996 TCCATGAATATAAATTGAGCCAAGG 57.471 36.000 0.00 0.00 0.00 3.61
69 70 6.494491 TCCATGAATATAAATTGAGCCAAGGG 59.506 38.462 0.00 0.00 0.00 3.95
70 71 6.494491 CCATGAATATAAATTGAGCCAAGGGA 59.506 38.462 0.00 0.00 0.00 4.20
71 72 7.179694 CCATGAATATAAATTGAGCCAAGGGAT 59.820 37.037 0.00 0.00 0.00 3.85
72 73 7.528996 TGAATATAAATTGAGCCAAGGGATG 57.471 36.000 0.00 0.00 0.00 3.51
73 74 5.990120 ATATAAATTGAGCCAAGGGATGC 57.010 39.130 0.00 0.00 0.00 3.91
74 75 0.819582 AAATTGAGCCAAGGGATGCG 59.180 50.000 0.00 0.00 0.00 4.73
75 76 0.034186 AATTGAGCCAAGGGATGCGA 60.034 50.000 0.00 0.00 0.00 5.10
76 77 0.184451 ATTGAGCCAAGGGATGCGAT 59.816 50.000 0.00 0.00 0.00 4.58
77 78 0.836606 TTGAGCCAAGGGATGCGATA 59.163 50.000 0.00 0.00 0.00 2.92
78 79 0.106708 TGAGCCAAGGGATGCGATAC 59.893 55.000 0.00 0.00 0.00 2.24
79 80 0.106708 GAGCCAAGGGATGCGATACA 59.893 55.000 0.00 0.00 0.00 2.29
80 81 0.546122 AGCCAAGGGATGCGATACAA 59.454 50.000 0.00 0.00 0.00 2.41
81 82 1.064758 AGCCAAGGGATGCGATACAAA 60.065 47.619 0.00 0.00 0.00 2.83
82 83 1.956477 GCCAAGGGATGCGATACAAAT 59.044 47.619 0.00 0.00 0.00 2.32
83 84 3.146066 GCCAAGGGATGCGATACAAATA 58.854 45.455 0.00 0.00 0.00 1.40
84 85 3.189287 GCCAAGGGATGCGATACAAATAG 59.811 47.826 0.00 0.00 0.00 1.73
85 86 3.189287 CCAAGGGATGCGATACAAATAGC 59.811 47.826 0.00 0.00 34.59 2.97
86 87 4.067896 CAAGGGATGCGATACAAATAGCT 58.932 43.478 0.00 0.00 35.03 3.32
87 88 3.931578 AGGGATGCGATACAAATAGCTC 58.068 45.455 0.00 0.00 35.03 4.09
88 89 3.324846 AGGGATGCGATACAAATAGCTCA 59.675 43.478 0.00 0.00 35.03 4.26
89 90 3.681897 GGGATGCGATACAAATAGCTCAG 59.318 47.826 0.00 0.00 35.03 3.35
90 91 4.560128 GGATGCGATACAAATAGCTCAGA 58.440 43.478 0.00 0.00 35.03 3.27
91 92 4.991056 GGATGCGATACAAATAGCTCAGAA 59.009 41.667 0.00 0.00 35.03 3.02
92 93 5.119898 GGATGCGATACAAATAGCTCAGAAG 59.880 44.000 0.00 0.00 35.03 2.85
93 94 4.371786 TGCGATACAAATAGCTCAGAAGG 58.628 43.478 0.00 0.00 35.03 3.46
94 95 4.141937 TGCGATACAAATAGCTCAGAAGGT 60.142 41.667 0.00 0.00 35.03 3.50
95 96 4.811557 GCGATACAAATAGCTCAGAAGGTT 59.188 41.667 0.00 0.00 34.40 3.50
96 97 5.294552 GCGATACAAATAGCTCAGAAGGTTT 59.705 40.000 0.00 0.00 34.40 3.27
97 98 6.479001 GCGATACAAATAGCTCAGAAGGTTTA 59.521 38.462 0.00 0.00 34.40 2.01
98 99 7.516943 GCGATACAAATAGCTCAGAAGGTTTAC 60.517 40.741 0.00 0.00 34.40 2.01
99 100 7.042658 CGATACAAATAGCTCAGAAGGTTTACC 60.043 40.741 0.00 0.00 34.40 2.85
100 101 5.254115 ACAAATAGCTCAGAAGGTTTACCC 58.746 41.667 0.00 0.00 36.42 3.69
102 103 6.214819 ACAAATAGCTCAGAAGGTTTACCCTA 59.785 38.462 0.00 0.00 45.47 3.53
103 104 6.487299 AATAGCTCAGAAGGTTTACCCTAG 57.513 41.667 0.00 0.00 45.47 3.02
104 105 3.108376 AGCTCAGAAGGTTTACCCTAGG 58.892 50.000 0.06 0.06 45.47 3.02
105 106 2.838813 GCTCAGAAGGTTTACCCTAGGT 59.161 50.000 8.29 0.00 45.47 3.08
106 107 3.118702 GCTCAGAAGGTTTACCCTAGGTC 60.119 52.174 8.29 0.00 45.47 3.85
107 108 4.354662 CTCAGAAGGTTTACCCTAGGTCT 58.645 47.826 8.29 0.00 45.47 3.85
108 109 4.094476 TCAGAAGGTTTACCCTAGGTCTG 58.906 47.826 8.29 11.27 45.47 3.51
109 110 3.838903 CAGAAGGTTTACCCTAGGTCTGT 59.161 47.826 8.29 0.84 45.47 3.41
110 111 3.838903 AGAAGGTTTACCCTAGGTCTGTG 59.161 47.826 8.29 0.00 45.47 3.66
111 112 3.271153 AGGTTTACCCTAGGTCTGTGT 57.729 47.619 8.29 0.03 43.87 3.72
112 113 3.595021 AGGTTTACCCTAGGTCTGTGTT 58.405 45.455 8.29 0.00 43.87 3.32
113 114 3.978672 AGGTTTACCCTAGGTCTGTGTTT 59.021 43.478 8.29 0.00 43.87 2.83
114 115 5.157395 AGGTTTACCCTAGGTCTGTGTTTA 58.843 41.667 8.29 0.00 43.87 2.01
115 116 5.608015 AGGTTTACCCTAGGTCTGTGTTTAA 59.392 40.000 8.29 0.00 43.87 1.52
116 117 6.101588 AGGTTTACCCTAGGTCTGTGTTTAAA 59.898 38.462 8.29 0.00 43.87 1.52
117 118 6.772233 GGTTTACCCTAGGTCTGTGTTTAAAA 59.228 38.462 8.29 0.00 37.09 1.52
118 119 7.255242 GGTTTACCCTAGGTCTGTGTTTAAAAC 60.255 40.741 8.29 5.88 37.09 2.43
119 120 5.641789 ACCCTAGGTCTGTGTTTAAAACT 57.358 39.130 8.29 0.00 0.00 2.66
120 121 5.618236 ACCCTAGGTCTGTGTTTAAAACTC 58.382 41.667 8.29 0.00 0.00 3.01
121 122 5.131475 ACCCTAGGTCTGTGTTTAAAACTCA 59.869 40.000 8.29 0.00 34.17 3.41
140 141 2.600388 GTGTAACTGCACGTGCTCA 58.400 52.632 37.59 24.50 42.66 4.26
141 142 0.232303 GTGTAACTGCACGTGCTCAC 59.768 55.000 37.59 29.37 42.66 3.51
152 153 3.562639 GTGCTCACGTACACAGACA 57.437 52.632 9.84 0.00 36.77 3.41
153 154 2.065993 GTGCTCACGTACACAGACAT 57.934 50.000 9.84 0.00 36.77 3.06
154 155 3.211803 GTGCTCACGTACACAGACATA 57.788 47.619 9.84 0.00 36.77 2.29
155 156 2.915463 GTGCTCACGTACACAGACATAC 59.085 50.000 9.84 0.00 36.77 2.39
156 157 2.554893 TGCTCACGTACACAGACATACA 59.445 45.455 0.00 0.00 0.00 2.29
157 158 2.915463 GCTCACGTACACAGACATACAC 59.085 50.000 0.00 0.00 0.00 2.90
158 159 3.366070 GCTCACGTACACAGACATACACT 60.366 47.826 0.00 0.00 0.00 3.55
159 160 4.404324 CTCACGTACACAGACATACACTC 58.596 47.826 0.00 0.00 0.00 3.51
160 161 3.816523 TCACGTACACAGACATACACTCA 59.183 43.478 0.00 0.00 0.00 3.41
161 162 4.457949 TCACGTACACAGACATACACTCAT 59.542 41.667 0.00 0.00 0.00 2.90
162 163 4.793731 CACGTACACAGACATACACTCATC 59.206 45.833 0.00 0.00 0.00 2.92
163 164 4.142447 ACGTACACAGACATACACTCATCC 60.142 45.833 0.00 0.00 0.00 3.51
164 165 3.510388 ACACAGACATACACTCATCCG 57.490 47.619 0.00 0.00 0.00 4.18
165 166 2.826128 ACACAGACATACACTCATCCGT 59.174 45.455 0.00 0.00 0.00 4.69
166 167 4.014406 ACACAGACATACACTCATCCGTA 58.986 43.478 0.00 0.00 0.00 4.02
167 168 4.645136 ACACAGACATACACTCATCCGTAT 59.355 41.667 0.00 0.00 0.00 3.06
168 169 4.978580 CACAGACATACACTCATCCGTATG 59.021 45.833 7.76 7.76 46.77 2.39
169 170 4.887655 ACAGACATACACTCATCCGTATGA 59.112 41.667 14.61 0.00 45.09 2.15
170 171 5.359860 ACAGACATACACTCATCCGTATGAA 59.640 40.000 14.61 0.00 45.09 2.57
171 172 6.040955 ACAGACATACACTCATCCGTATGAAT 59.959 38.462 14.61 2.28 45.09 2.57
172 173 6.364435 CAGACATACACTCATCCGTATGAATG 59.636 42.308 14.61 0.00 45.09 2.67
173 174 6.265422 AGACATACACTCATCCGTATGAATGA 59.735 38.462 6.43 0.00 45.09 2.57
174 175 6.816136 ACATACACTCATCCGTATGAATGAA 58.184 36.000 6.43 0.00 45.09 2.57
175 176 6.701841 ACATACACTCATCCGTATGAATGAAC 59.298 38.462 6.43 0.00 45.09 3.18
176 177 5.084818 ACACTCATCCGTATGAATGAACA 57.915 39.130 6.43 0.00 40.92 3.18
177 178 4.870426 ACACTCATCCGTATGAATGAACAC 59.130 41.667 6.43 0.00 40.92 3.32
178 179 4.869861 CACTCATCCGTATGAATGAACACA 59.130 41.667 0.00 0.00 40.92 3.72
179 180 4.870426 ACTCATCCGTATGAATGAACACAC 59.130 41.667 0.00 0.00 41.57 3.82
180 181 4.826556 TCATCCGTATGAATGAACACACA 58.173 39.130 0.00 0.00 39.20 3.72
181 182 5.241662 TCATCCGTATGAATGAACACACAA 58.758 37.500 0.00 0.00 39.20 3.33
182 183 5.703130 TCATCCGTATGAATGAACACACAAA 59.297 36.000 0.00 0.00 39.20 2.83
183 184 5.351233 TCCGTATGAATGAACACACAAAC 57.649 39.130 0.00 0.00 0.00 2.93
184 185 4.816925 TCCGTATGAATGAACACACAAACA 59.183 37.500 0.00 0.00 0.00 2.83
185 186 5.471797 TCCGTATGAATGAACACACAAACAT 59.528 36.000 0.00 0.00 0.00 2.71
186 187 5.794945 CCGTATGAATGAACACACAAACATC 59.205 40.000 0.00 0.00 0.00 3.06
187 188 5.794945 CGTATGAATGAACACACAAACATCC 59.205 40.000 0.00 0.00 0.00 3.51
188 189 4.582701 TGAATGAACACACAAACATCCC 57.417 40.909 0.00 0.00 0.00 3.85
189 190 3.956848 TGAATGAACACACAAACATCCCA 59.043 39.130 0.00 0.00 0.00 4.37
190 191 4.588106 TGAATGAACACACAAACATCCCAT 59.412 37.500 0.00 0.00 0.00 4.00
191 192 4.789012 ATGAACACACAAACATCCCATC 57.211 40.909 0.00 0.00 0.00 3.51
192 193 3.831323 TGAACACACAAACATCCCATCT 58.169 40.909 0.00 0.00 0.00 2.90
193 194 3.820467 TGAACACACAAACATCCCATCTC 59.180 43.478 0.00 0.00 0.00 2.75
194 195 3.795688 ACACACAAACATCCCATCTCT 57.204 42.857 0.00 0.00 0.00 3.10
195 196 4.908601 ACACACAAACATCCCATCTCTA 57.091 40.909 0.00 0.00 0.00 2.43
196 197 5.441718 ACACACAAACATCCCATCTCTAT 57.558 39.130 0.00 0.00 0.00 1.98
197 198 5.188434 ACACACAAACATCCCATCTCTATG 58.812 41.667 0.00 0.00 0.00 2.23
198 199 5.045651 ACACACAAACATCCCATCTCTATGA 60.046 40.000 0.00 0.00 34.84 2.15
199 200 5.882000 CACACAAACATCCCATCTCTATGAA 59.118 40.000 0.00 0.00 34.84 2.57
200 201 5.882557 ACACAAACATCCCATCTCTATGAAC 59.117 40.000 0.00 0.00 34.84 3.18
201 202 5.882000 CACAAACATCCCATCTCTATGAACA 59.118 40.000 0.00 0.00 34.84 3.18
202 203 6.544931 CACAAACATCCCATCTCTATGAACAT 59.455 38.462 0.00 0.00 34.84 2.71
203 204 6.769822 ACAAACATCCCATCTCTATGAACATC 59.230 38.462 0.00 0.00 34.84 3.06
204 205 6.760440 AACATCCCATCTCTATGAACATCT 57.240 37.500 0.00 0.00 34.84 2.90
205 206 6.760440 ACATCCCATCTCTATGAACATCTT 57.240 37.500 0.00 0.00 34.84 2.40
206 207 6.767456 ACATCCCATCTCTATGAACATCTTC 58.233 40.000 0.00 0.00 34.84 2.87
207 208 5.815233 TCCCATCTCTATGAACATCTTCC 57.185 43.478 0.00 0.00 34.84 3.46
208 209 5.218959 TCCCATCTCTATGAACATCTTCCA 58.781 41.667 0.00 0.00 34.84 3.53
209 210 5.306419 TCCCATCTCTATGAACATCTTCCAG 59.694 44.000 0.00 0.00 34.84 3.86
210 211 5.306419 CCCATCTCTATGAACATCTTCCAGA 59.694 44.000 0.00 0.00 34.84 3.86
211 212 6.222389 CCATCTCTATGAACATCTTCCAGAC 58.778 44.000 0.00 0.00 34.84 3.51
212 213 6.183360 CCATCTCTATGAACATCTTCCAGACA 60.183 42.308 0.00 0.00 34.84 3.41
213 214 6.857437 TCTCTATGAACATCTTCCAGACAA 57.143 37.500 0.00 0.00 0.00 3.18
214 215 6.871844 TCTCTATGAACATCTTCCAGACAAG 58.128 40.000 0.00 0.00 0.00 3.16
215 216 5.982356 TCTATGAACATCTTCCAGACAAGG 58.018 41.667 0.00 0.00 0.00 3.61
216 217 3.423539 TGAACATCTTCCAGACAAGGG 57.576 47.619 0.00 0.00 0.00 3.95
217 218 2.040278 TGAACATCTTCCAGACAAGGGG 59.960 50.000 0.00 0.00 0.00 4.79
218 219 2.044793 ACATCTTCCAGACAAGGGGA 57.955 50.000 0.00 0.00 0.00 4.81
219 220 1.912043 ACATCTTCCAGACAAGGGGAG 59.088 52.381 0.00 0.00 34.02 4.30
220 221 1.912043 CATCTTCCAGACAAGGGGAGT 59.088 52.381 0.00 0.00 34.02 3.85
221 222 1.352083 TCTTCCAGACAAGGGGAGTG 58.648 55.000 0.00 0.00 34.02 3.51
222 223 0.322008 CTTCCAGACAAGGGGAGTGC 60.322 60.000 0.00 0.00 34.02 4.40
223 224 0.768221 TTCCAGACAAGGGGAGTGCT 60.768 55.000 0.00 0.00 34.02 4.40
224 225 1.002868 CCAGACAAGGGGAGTGCTG 60.003 63.158 0.00 0.00 0.00 4.41
225 226 1.483595 CCAGACAAGGGGAGTGCTGA 61.484 60.000 0.00 0.00 0.00 4.26
226 227 0.036577 CAGACAAGGGGAGTGCTGAG 60.037 60.000 0.00 0.00 0.00 3.35
227 228 0.178921 AGACAAGGGGAGTGCTGAGA 60.179 55.000 0.00 0.00 0.00 3.27
228 229 0.908198 GACAAGGGGAGTGCTGAGAT 59.092 55.000 0.00 0.00 0.00 2.75
229 230 0.617413 ACAAGGGGAGTGCTGAGATG 59.383 55.000 0.00 0.00 0.00 2.90
230 231 0.747283 CAAGGGGAGTGCTGAGATGC 60.747 60.000 0.00 0.00 0.00 3.91
231 232 2.202987 GGGGAGTGCTGAGATGCG 60.203 66.667 0.00 0.00 35.36 4.73
232 233 2.581354 GGGAGTGCTGAGATGCGT 59.419 61.111 0.00 0.00 35.36 5.24
233 234 1.676678 GGGGAGTGCTGAGATGCGTA 61.677 60.000 0.00 0.00 35.36 4.42
234 235 0.528684 GGGAGTGCTGAGATGCGTAC 60.529 60.000 0.00 0.00 35.36 3.67
235 236 0.173481 GGAGTGCTGAGATGCGTACA 59.827 55.000 0.00 0.00 35.36 2.90
236 237 1.272781 GAGTGCTGAGATGCGTACAC 58.727 55.000 0.00 0.00 35.36 2.90
237 238 0.108615 AGTGCTGAGATGCGTACACC 60.109 55.000 0.00 0.00 35.36 4.16
238 239 0.108615 GTGCTGAGATGCGTACACCT 60.109 55.000 0.00 0.00 35.36 4.00
239 240 0.173481 TGCTGAGATGCGTACACCTC 59.827 55.000 0.00 0.00 35.36 3.85
240 241 0.457851 GCTGAGATGCGTACACCTCT 59.542 55.000 0.00 0.00 0.00 3.69
241 242 1.676529 GCTGAGATGCGTACACCTCTA 59.323 52.381 0.00 0.00 0.00 2.43
242 243 2.099263 GCTGAGATGCGTACACCTCTAA 59.901 50.000 0.00 0.00 0.00 2.10
243 244 3.696898 CTGAGATGCGTACACCTCTAAC 58.303 50.000 0.00 0.00 0.00 2.34
244 245 3.086282 TGAGATGCGTACACCTCTAACA 58.914 45.455 0.00 0.00 0.00 2.41
245 246 3.508402 TGAGATGCGTACACCTCTAACAA 59.492 43.478 0.00 0.00 0.00 2.83
246 247 4.021807 TGAGATGCGTACACCTCTAACAAA 60.022 41.667 0.00 0.00 0.00 2.83
247 248 4.890088 AGATGCGTACACCTCTAACAAAA 58.110 39.130 0.00 0.00 0.00 2.44
248 249 5.302360 AGATGCGTACACCTCTAACAAAAA 58.698 37.500 0.00 0.00 0.00 1.94
249 250 4.799419 TGCGTACACCTCTAACAAAAAC 57.201 40.909 0.00 0.00 0.00 2.43
250 251 3.245754 TGCGTACACCTCTAACAAAAACG 59.754 43.478 0.00 0.00 0.00 3.60
251 252 3.791175 CGTACACCTCTAACAAAAACGC 58.209 45.455 0.00 0.00 0.00 4.84
252 253 3.363280 CGTACACCTCTAACAAAAACGCC 60.363 47.826 0.00 0.00 0.00 5.68
253 254 1.951602 ACACCTCTAACAAAAACGCCC 59.048 47.619 0.00 0.00 0.00 6.13
254 255 1.069500 CACCTCTAACAAAAACGCCCG 60.069 52.381 0.00 0.00 0.00 6.13
255 256 0.519961 CCTCTAACAAAAACGCCCGG 59.480 55.000 0.00 0.00 0.00 5.73
256 257 0.109919 CTCTAACAAAAACGCCCGGC 60.110 55.000 0.00 0.00 0.00 6.13
270 271 2.126385 CGGCGCAGGTTGTACGTA 60.126 61.111 10.83 0.00 0.00 3.57
271 272 2.156446 CGGCGCAGGTTGTACGTAG 61.156 63.158 10.83 0.00 0.00 3.51
272 273 1.213537 GGCGCAGGTTGTACGTAGA 59.786 57.895 10.83 0.00 0.00 2.59
273 274 0.179119 GGCGCAGGTTGTACGTAGAT 60.179 55.000 10.83 0.00 0.00 1.98
274 275 1.636988 GCGCAGGTTGTACGTAGATT 58.363 50.000 0.30 0.00 0.00 2.40
275 276 1.997606 GCGCAGGTTGTACGTAGATTT 59.002 47.619 0.30 0.00 0.00 2.17
276 277 3.181397 GCGCAGGTTGTACGTAGATTTA 58.819 45.455 0.30 0.00 0.00 1.40
277 278 3.800506 GCGCAGGTTGTACGTAGATTTAT 59.199 43.478 0.30 0.00 0.00 1.40
278 279 4.269363 GCGCAGGTTGTACGTAGATTTATT 59.731 41.667 0.30 0.00 0.00 1.40
279 280 5.459762 GCGCAGGTTGTACGTAGATTTATTA 59.540 40.000 0.30 0.00 0.00 0.98
280 281 6.345565 GCGCAGGTTGTACGTAGATTTATTAG 60.346 42.308 0.30 0.00 0.00 1.73
281 282 6.914215 CGCAGGTTGTACGTAGATTTATTAGA 59.086 38.462 0.00 0.00 0.00 2.10
282 283 7.594015 CGCAGGTTGTACGTAGATTTATTAGAT 59.406 37.037 0.00 0.00 0.00 1.98
283 284 9.903682 GCAGGTTGTACGTAGATTTATTAGATA 57.096 33.333 0.00 0.00 0.00 1.98
292 293 9.745880 ACGTAGATTTATTAGATACACAAGTGG 57.254 33.333 5.08 0.00 34.19 4.00
293 294 9.961265 CGTAGATTTATTAGATACACAAGTGGA 57.039 33.333 5.08 0.00 34.19 4.02
305 306 9.911788 AGATACACAAGTGGAATCAAATATCTT 57.088 29.630 15.56 0.00 32.73 2.40
308 309 7.830739 ACACAAGTGGAATCAAATATCTTTCC 58.169 34.615 5.08 0.00 38.48 3.13
309 310 6.968904 CACAAGTGGAATCAAATATCTTTCCG 59.031 38.462 0.00 0.00 40.43 4.30
310 311 6.095440 ACAAGTGGAATCAAATATCTTTCCGG 59.905 38.462 0.00 0.00 40.43 5.14
311 312 6.001449 AGTGGAATCAAATATCTTTCCGGA 57.999 37.500 0.00 0.00 40.43 5.14
312 313 6.605119 AGTGGAATCAAATATCTTTCCGGAT 58.395 36.000 4.15 0.00 40.43 4.18
313 314 6.488006 AGTGGAATCAAATATCTTTCCGGATG 59.512 38.462 4.15 1.01 40.43 3.51
314 315 5.241506 TGGAATCAAATATCTTTCCGGATGC 59.758 40.000 4.15 0.00 40.43 3.91
315 316 5.241506 GGAATCAAATATCTTTCCGGATGCA 59.758 40.000 4.15 0.00 0.00 3.96
316 317 5.695851 ATCAAATATCTTTCCGGATGCAC 57.304 39.130 4.15 0.00 0.00 4.57
317 318 3.882888 TCAAATATCTTTCCGGATGCACC 59.117 43.478 4.15 0.00 0.00 5.01
318 319 3.576078 AATATCTTTCCGGATGCACCA 57.424 42.857 4.15 0.00 38.90 4.17
319 320 2.325583 TATCTTTCCGGATGCACCAC 57.674 50.000 4.15 0.00 38.90 4.16
320 321 0.327924 ATCTTTCCGGATGCACCACA 59.672 50.000 4.15 0.00 38.90 4.17
321 322 0.109532 TCTTTCCGGATGCACCACAA 59.890 50.000 4.15 0.00 38.90 3.33
322 323 0.523072 CTTTCCGGATGCACCACAAG 59.477 55.000 4.15 0.00 38.90 3.16
323 324 1.523154 TTTCCGGATGCACCACAAGC 61.523 55.000 4.15 0.00 38.90 4.01
325 326 2.267351 CCGGATGCACCACAAGCAA 61.267 57.895 0.00 0.00 46.27 3.91
326 327 1.597797 CCGGATGCACCACAAGCAAT 61.598 55.000 0.00 0.00 46.27 3.56
327 328 0.244450 CGGATGCACCACAAGCAATT 59.756 50.000 0.00 0.00 46.27 2.32
328 329 1.717194 GGATGCACCACAAGCAATTG 58.283 50.000 0.00 0.00 46.27 2.32
329 330 1.001181 GGATGCACCACAAGCAATTGT 59.999 47.619 7.40 0.00 46.27 2.71
330 331 2.548493 GGATGCACCACAAGCAATTGTT 60.548 45.455 7.40 0.00 46.27 2.83
331 332 3.305950 GGATGCACCACAAGCAATTGTTA 60.306 43.478 7.40 0.00 46.27 2.41
332 333 4.497300 GATGCACCACAAGCAATTGTTAT 58.503 39.130 7.40 0.00 46.27 1.89
333 334 3.911868 TGCACCACAAGCAATTGTTATC 58.088 40.909 7.40 0.00 39.39 1.75
334 335 3.573538 TGCACCACAAGCAATTGTTATCT 59.426 39.130 7.40 0.00 39.39 1.98
335 336 4.039004 TGCACCACAAGCAATTGTTATCTT 59.961 37.500 7.40 0.00 39.39 2.40
336 337 4.386652 GCACCACAAGCAATTGTTATCTTG 59.613 41.667 17.06 17.06 41.07 3.02
337 338 4.386652 CACCACAAGCAATTGTTATCTTGC 59.613 41.667 18.04 0.00 46.32 4.01
344 345 4.717991 GCAATTGTTATCTTGCGTGTACA 58.282 39.130 7.40 0.00 38.47 2.90
345 346 4.788100 GCAATTGTTATCTTGCGTGTACAG 59.212 41.667 7.40 0.00 38.47 2.74
346 347 5.323900 CAATTGTTATCTTGCGTGTACAGG 58.676 41.667 11.20 11.20 0.00 4.00
347 348 2.343101 TGTTATCTTGCGTGTACAGGC 58.657 47.619 28.93 28.93 42.08 4.85
348 349 1.323534 GTTATCTTGCGTGTACAGGCG 59.676 52.381 29.31 19.06 44.42 5.52
349 350 0.528924 TATCTTGCGTGTACAGGCGT 59.471 50.000 29.31 19.35 44.42 5.68
350 351 1.014044 ATCTTGCGTGTACAGGCGTG 61.014 55.000 29.31 24.11 44.42 5.34
351 352 1.663388 CTTGCGTGTACAGGCGTGA 60.663 57.895 29.31 19.01 44.42 4.35
352 353 1.005512 TTGCGTGTACAGGCGTGAT 60.006 52.632 29.31 0.03 44.42 3.06
353 354 1.011968 TTGCGTGTACAGGCGTGATC 61.012 55.000 29.31 8.49 44.42 2.92
354 355 1.153823 GCGTGTACAGGCGTGATCT 60.154 57.895 23.26 0.00 32.33 2.75
355 356 0.736325 GCGTGTACAGGCGTGATCTT 60.736 55.000 23.26 0.00 32.33 2.40
356 357 1.710013 CGTGTACAGGCGTGATCTTT 58.290 50.000 14.38 0.00 0.00 2.52
357 358 1.390123 CGTGTACAGGCGTGATCTTTG 59.610 52.381 14.38 0.00 0.00 2.77
358 359 2.413837 GTGTACAGGCGTGATCTTTGT 58.586 47.619 14.38 0.00 0.00 2.83
359 360 2.157668 GTGTACAGGCGTGATCTTTGTG 59.842 50.000 14.38 0.00 0.00 3.33
360 361 2.224185 TGTACAGGCGTGATCTTTGTGT 60.224 45.455 14.38 0.00 0.00 3.72
361 362 1.967319 ACAGGCGTGATCTTTGTGTT 58.033 45.000 14.38 0.00 0.00 3.32
362 363 1.603802 ACAGGCGTGATCTTTGTGTTG 59.396 47.619 14.38 0.00 0.00 3.33
363 364 0.593128 AGGCGTGATCTTTGTGTTGC 59.407 50.000 0.00 0.00 0.00 4.17
364 365 0.593128 GGCGTGATCTTTGTGTTGCT 59.407 50.000 0.00 0.00 0.00 3.91
365 366 1.664016 GGCGTGATCTTTGTGTTGCTG 60.664 52.381 0.00 0.00 0.00 4.41
366 367 1.264020 GCGTGATCTTTGTGTTGCTGA 59.736 47.619 0.00 0.00 0.00 4.26
367 368 2.663879 GCGTGATCTTTGTGTTGCTGAG 60.664 50.000 0.00 0.00 0.00 3.35
368 369 2.663879 CGTGATCTTTGTGTTGCTGAGC 60.664 50.000 0.00 0.00 0.00 4.26
369 370 1.532437 TGATCTTTGTGTTGCTGAGCG 59.468 47.619 0.00 0.00 0.00 5.03
370 371 1.532868 GATCTTTGTGTTGCTGAGCGT 59.467 47.619 0.00 0.00 0.00 5.07
371 372 0.937304 TCTTTGTGTTGCTGAGCGTC 59.063 50.000 0.00 0.00 0.00 5.19
372 373 0.383491 CTTTGTGTTGCTGAGCGTCG 60.383 55.000 0.00 0.00 0.00 5.12
373 374 1.771073 TTTGTGTTGCTGAGCGTCGG 61.771 55.000 0.00 0.00 0.00 4.79
374 375 2.355837 GTGTTGCTGAGCGTCGGA 60.356 61.111 0.00 0.00 0.00 4.55
375 376 2.049156 TGTTGCTGAGCGTCGGAG 60.049 61.111 0.00 0.00 0.00 4.63
376 377 2.258591 GTTGCTGAGCGTCGGAGA 59.741 61.111 0.00 0.00 0.00 3.71
377 378 1.153745 GTTGCTGAGCGTCGGAGAT 60.154 57.895 0.00 0.00 40.67 2.75
378 379 0.100682 GTTGCTGAGCGTCGGAGATA 59.899 55.000 0.00 0.00 40.67 1.98
379 380 0.100682 TTGCTGAGCGTCGGAGATAC 59.899 55.000 0.00 0.00 40.67 2.24
380 381 0.748367 TGCTGAGCGTCGGAGATACT 60.748 55.000 0.00 0.00 40.67 2.12
381 382 0.317436 GCTGAGCGTCGGAGATACTG 60.317 60.000 0.00 0.00 40.67 2.74
382 383 1.300481 CTGAGCGTCGGAGATACTGA 58.700 55.000 0.00 0.00 40.67 3.41
383 384 1.671328 CTGAGCGTCGGAGATACTGAA 59.329 52.381 0.00 0.00 40.67 3.02
384 385 1.400846 TGAGCGTCGGAGATACTGAAC 59.599 52.381 0.00 0.00 40.67 3.18
385 386 0.377554 AGCGTCGGAGATACTGAACG 59.622 55.000 0.00 0.00 40.67 3.95
386 387 0.376152 GCGTCGGAGATACTGAACGA 59.624 55.000 0.00 0.00 40.67 3.85
387 388 1.202110 GCGTCGGAGATACTGAACGAA 60.202 52.381 0.00 0.00 40.67 3.85
388 389 2.706273 CGTCGGAGATACTGAACGAAG 58.294 52.381 0.00 0.00 40.67 3.79
389 390 2.350804 CGTCGGAGATACTGAACGAAGA 59.649 50.000 0.00 0.00 40.67 2.87
390 391 3.181513 CGTCGGAGATACTGAACGAAGAA 60.182 47.826 0.00 0.00 40.67 2.52
391 392 4.344448 GTCGGAGATACTGAACGAAGAAG 58.656 47.826 0.00 0.00 40.67 2.85
392 393 4.094590 GTCGGAGATACTGAACGAAGAAGA 59.905 45.833 0.00 0.00 40.67 2.87
393 394 4.698780 TCGGAGATACTGAACGAAGAAGAA 59.301 41.667 0.00 0.00 0.00 2.52
394 395 5.182570 TCGGAGATACTGAACGAAGAAGAAA 59.817 40.000 0.00 0.00 0.00 2.52
395 396 5.862323 CGGAGATACTGAACGAAGAAGAAAA 59.138 40.000 0.00 0.00 0.00 2.29
396 397 6.365247 CGGAGATACTGAACGAAGAAGAAAAA 59.635 38.462 0.00 0.00 0.00 1.94
411 412 3.615099 AAAAATATCAACCGCGCGG 57.385 47.368 44.88 44.88 42.03 6.46
424 425 4.742201 CGCGGGAGGTGGAGTGTG 62.742 72.222 0.00 0.00 0.00 3.82
425 426 4.394712 GCGGGAGGTGGAGTGTGG 62.395 72.222 0.00 0.00 0.00 4.17
426 427 4.394712 CGGGAGGTGGAGTGTGGC 62.395 72.222 0.00 0.00 0.00 5.01
427 428 2.930562 GGGAGGTGGAGTGTGGCT 60.931 66.667 0.00 0.00 0.00 4.75
428 429 2.529744 GGGAGGTGGAGTGTGGCTT 61.530 63.158 0.00 0.00 0.00 4.35
429 430 1.456287 GGAGGTGGAGTGTGGCTTT 59.544 57.895 0.00 0.00 0.00 3.51
430 431 0.890996 GGAGGTGGAGTGTGGCTTTG 60.891 60.000 0.00 0.00 0.00 2.77
431 432 0.890996 GAGGTGGAGTGTGGCTTTGG 60.891 60.000 0.00 0.00 0.00 3.28
432 433 1.150536 GGTGGAGTGTGGCTTTGGA 59.849 57.895 0.00 0.00 0.00 3.53
433 434 0.467290 GGTGGAGTGTGGCTTTGGAA 60.467 55.000 0.00 0.00 0.00 3.53
434 435 0.668535 GTGGAGTGTGGCTTTGGAAC 59.331 55.000 0.00 0.00 0.00 3.62
435 436 0.817634 TGGAGTGTGGCTTTGGAACG 60.818 55.000 0.00 0.00 0.00 3.95
436 437 0.534203 GGAGTGTGGCTTTGGAACGA 60.534 55.000 0.00 0.00 0.00 3.85
437 438 0.868406 GAGTGTGGCTTTGGAACGAG 59.132 55.000 0.00 0.00 0.00 4.18
438 439 0.468226 AGTGTGGCTTTGGAACGAGA 59.532 50.000 0.00 0.00 0.00 4.04
439 440 1.134220 AGTGTGGCTTTGGAACGAGAA 60.134 47.619 0.00 0.00 0.00 2.87
440 441 1.673920 GTGTGGCTTTGGAACGAGAAA 59.326 47.619 0.00 0.00 0.00 2.52
441 442 2.098443 GTGTGGCTTTGGAACGAGAAAA 59.902 45.455 0.00 0.00 0.00 2.29
442 443 2.098443 TGTGGCTTTGGAACGAGAAAAC 59.902 45.455 0.00 0.00 0.00 2.43
443 444 2.098443 GTGGCTTTGGAACGAGAAAACA 59.902 45.455 0.00 0.00 0.00 2.83
444 445 2.755655 TGGCTTTGGAACGAGAAAACAA 59.244 40.909 0.00 0.00 0.00 2.83
445 446 3.193691 TGGCTTTGGAACGAGAAAACAAA 59.806 39.130 0.00 0.00 0.00 2.83
446 447 4.177783 GGCTTTGGAACGAGAAAACAAAA 58.822 39.130 0.00 0.00 31.52 2.44
447 448 4.808895 GGCTTTGGAACGAGAAAACAAAAT 59.191 37.500 0.00 0.00 31.52 1.82
448 449 5.276820 GGCTTTGGAACGAGAAAACAAAATG 60.277 40.000 0.00 0.00 31.52 2.32
449 450 5.710613 TTTGGAACGAGAAAACAAAATGC 57.289 34.783 0.00 0.00 0.00 3.56
450 451 3.712187 TGGAACGAGAAAACAAAATGCC 58.288 40.909 0.00 0.00 0.00 4.40
451 452 3.383185 TGGAACGAGAAAACAAAATGCCT 59.617 39.130 0.00 0.00 0.00 4.75
452 453 3.735746 GGAACGAGAAAACAAAATGCCTG 59.264 43.478 0.00 0.00 0.00 4.85
453 454 2.742774 ACGAGAAAACAAAATGCCTGC 58.257 42.857 0.00 0.00 0.00 4.85
454 455 2.061028 CGAGAAAACAAAATGCCTGCC 58.939 47.619 0.00 0.00 0.00 4.85
455 456 2.288395 CGAGAAAACAAAATGCCTGCCT 60.288 45.455 0.00 0.00 0.00 4.75
456 457 3.732212 GAGAAAACAAAATGCCTGCCTT 58.268 40.909 0.00 0.00 0.00 4.35
457 458 4.129380 GAGAAAACAAAATGCCTGCCTTT 58.871 39.130 0.00 0.00 0.00 3.11
458 459 4.525996 AGAAAACAAAATGCCTGCCTTTT 58.474 34.783 0.14 0.14 0.00 2.27
459 460 4.576053 AGAAAACAAAATGCCTGCCTTTTC 59.424 37.500 2.70 0.00 0.00 2.29
460 461 2.549064 ACAAAATGCCTGCCTTTTCC 57.451 45.000 2.70 0.00 0.00 3.13
461 462 2.049372 ACAAAATGCCTGCCTTTTCCT 58.951 42.857 2.70 0.00 0.00 3.36
462 463 2.224354 ACAAAATGCCTGCCTTTTCCTG 60.224 45.455 2.70 0.00 0.00 3.86
463 464 0.978907 AAATGCCTGCCTTTTCCTGG 59.021 50.000 0.00 0.00 0.00 4.45
464 465 0.906282 AATGCCTGCCTTTTCCTGGG 60.906 55.000 0.00 0.00 0.00 4.45
465 466 2.097978 ATGCCTGCCTTTTCCTGGGT 62.098 55.000 0.00 0.00 0.00 4.51
466 467 2.278330 GCCTGCCTTTTCCTGGGTG 61.278 63.158 0.00 0.00 0.00 4.61
467 468 2.278330 CCTGCCTTTTCCTGGGTGC 61.278 63.158 0.00 0.00 0.00 5.01
468 469 2.597217 TGCCTTTTCCTGGGTGCG 60.597 61.111 0.00 0.00 0.00 5.34
469 470 3.373565 GCCTTTTCCTGGGTGCGG 61.374 66.667 0.00 0.00 0.00 5.69
470 471 2.676471 CCTTTTCCTGGGTGCGGG 60.676 66.667 0.00 0.00 0.00 6.13
471 472 2.115266 CTTTTCCTGGGTGCGGGT 59.885 61.111 0.00 0.00 0.00 5.28
472 473 1.377229 CTTTTCCTGGGTGCGGGTA 59.623 57.895 0.00 0.00 0.00 3.69
473 474 0.958876 CTTTTCCTGGGTGCGGGTAC 60.959 60.000 0.00 0.00 0.00 3.34
474 475 1.706995 TTTTCCTGGGTGCGGGTACA 61.707 55.000 0.00 0.00 0.00 2.90
475 476 2.400269 TTTCCTGGGTGCGGGTACAC 62.400 60.000 0.00 0.00 39.94 2.90
476 477 4.752879 CCTGGGTGCGGGTACACG 62.753 72.222 14.60 14.60 41.65 4.49
477 478 4.752879 CTGGGTGCGGGTACACGG 62.753 72.222 20.88 0.65 41.65 4.94
479 480 4.006357 GGGTGCGGGTACACGGAA 62.006 66.667 20.88 0.00 41.65 4.30
480 481 2.030862 GGTGCGGGTACACGGAAA 59.969 61.111 20.88 0.00 41.65 3.13
481 482 2.030958 GGTGCGGGTACACGGAAAG 61.031 63.158 20.88 0.00 41.65 2.62
482 483 2.030958 GTGCGGGTACACGGAAAGG 61.031 63.158 20.88 0.00 35.54 3.11
483 484 2.208619 TGCGGGTACACGGAAAGGA 61.209 57.895 20.88 0.00 0.00 3.36
484 485 1.447314 GCGGGTACACGGAAAGGAG 60.447 63.158 20.88 0.00 0.00 3.69
485 486 1.969862 CGGGTACACGGAAAGGAGT 59.030 57.895 10.40 0.00 0.00 3.85
486 487 0.389426 CGGGTACACGGAAAGGAGTG 60.389 60.000 10.40 0.00 43.46 3.51
487 488 0.971386 GGGTACACGGAAAGGAGTGA 59.029 55.000 2.42 0.00 40.56 3.41
488 489 1.337541 GGGTACACGGAAAGGAGTGAC 60.338 57.143 2.42 0.00 40.56 3.67
489 490 1.668047 GGTACACGGAAAGGAGTGACG 60.668 57.143 2.42 0.00 40.56 4.35
490 491 1.267806 GTACACGGAAAGGAGTGACGA 59.732 52.381 2.42 0.00 40.56 4.20
491 492 0.748450 ACACGGAAAGGAGTGACGAA 59.252 50.000 2.42 0.00 40.56 3.85
492 493 1.137513 CACGGAAAGGAGTGACGAAC 58.862 55.000 0.00 0.00 40.56 3.95
493 494 0.748450 ACGGAAAGGAGTGACGAACA 59.252 50.000 0.00 0.00 0.00 3.18
501 502 3.906475 GTGACGAACACGTACGCA 58.094 55.556 16.72 0.00 40.41 5.24
502 503 1.764967 GTGACGAACACGTACGCAG 59.235 57.895 16.72 11.09 40.41 5.18
503 504 0.658244 GTGACGAACACGTACGCAGA 60.658 55.000 16.72 0.00 40.41 4.26
504 505 0.385098 TGACGAACACGTACGCAGAG 60.385 55.000 16.72 5.61 40.41 3.35
505 506 0.110509 GACGAACACGTACGCAGAGA 60.111 55.000 16.72 0.00 40.41 3.10
506 507 0.385223 ACGAACACGTACGCAGAGAC 60.385 55.000 16.72 1.58 38.51 3.36
507 508 1.386293 CGAACACGTACGCAGAGACG 61.386 60.000 16.72 10.14 43.52 4.18
508 509 1.662845 GAACACGTACGCAGAGACGC 61.663 60.000 16.72 0.00 42.19 5.19
509 510 2.874780 CACGTACGCAGAGACGCC 60.875 66.667 16.72 0.00 42.19 5.68
510 511 3.359523 ACGTACGCAGAGACGCCA 61.360 61.111 16.72 0.00 42.19 5.69
511 512 2.874780 CGTACGCAGAGACGCCAC 60.875 66.667 0.52 0.00 34.38 5.01
512 513 2.874780 GTACGCAGAGACGCCACG 60.875 66.667 0.00 0.00 36.19 4.94
513 514 4.771356 TACGCAGAGACGCCACGC 62.771 66.667 0.00 0.00 36.19 5.34
530 531 4.115199 CCGCTTTCCCCCTCCCTG 62.115 72.222 0.00 0.00 0.00 4.45
531 532 3.330720 CGCTTTCCCCCTCCCTGT 61.331 66.667 0.00 0.00 0.00 4.00
532 533 1.993391 CGCTTTCCCCCTCCCTGTA 60.993 63.158 0.00 0.00 0.00 2.74
533 534 1.915983 GCTTTCCCCCTCCCTGTAG 59.084 63.158 0.00 0.00 0.00 2.74
534 535 0.620700 GCTTTCCCCCTCCCTGTAGA 60.621 60.000 0.00 0.00 0.00 2.59
535 536 1.966845 CTTTCCCCCTCCCTGTAGAA 58.033 55.000 0.00 0.00 0.00 2.10
536 537 2.493091 CTTTCCCCCTCCCTGTAGAAT 58.507 52.381 0.00 0.00 0.00 2.40
537 538 2.191981 TTCCCCCTCCCTGTAGAATC 57.808 55.000 0.00 0.00 0.00 2.52
538 539 0.105658 TCCCCCTCCCTGTAGAATCG 60.106 60.000 0.00 0.00 0.00 3.34
539 540 1.749033 CCCCTCCCTGTAGAATCGC 59.251 63.158 0.00 0.00 0.00 4.58
540 541 0.760945 CCCCTCCCTGTAGAATCGCT 60.761 60.000 0.00 0.00 0.00 4.93
541 542 1.123928 CCCTCCCTGTAGAATCGCTT 58.876 55.000 0.00 0.00 0.00 4.68
542 543 1.486726 CCCTCCCTGTAGAATCGCTTT 59.513 52.381 0.00 0.00 0.00 3.51
543 544 2.555199 CCTCCCTGTAGAATCGCTTTG 58.445 52.381 0.00 0.00 0.00 2.77
544 545 2.555199 CTCCCTGTAGAATCGCTTTGG 58.445 52.381 0.00 0.00 0.00 3.28
545 546 1.209504 TCCCTGTAGAATCGCTTTGGG 59.790 52.381 0.00 0.00 33.30 4.12
546 547 1.017387 CCTGTAGAATCGCTTTGGGC 58.983 55.000 0.00 0.00 37.64 5.36
547 548 1.407437 CCTGTAGAATCGCTTTGGGCT 60.407 52.381 0.00 0.00 39.13 5.19
548 549 1.667724 CTGTAGAATCGCTTTGGGCTG 59.332 52.381 0.00 0.00 39.13 4.85
549 550 1.003118 TGTAGAATCGCTTTGGGCTGT 59.997 47.619 0.00 0.00 39.13 4.40
550 551 1.398390 GTAGAATCGCTTTGGGCTGTG 59.602 52.381 0.00 0.00 39.13 3.66
551 552 1.153958 GAATCGCTTTGGGCTGTGC 60.154 57.895 0.00 0.00 39.13 4.57
561 562 3.435186 GGCTGTGCCTCGCCTTTC 61.435 66.667 0.73 0.00 46.69 2.62
562 563 2.359230 GCTGTGCCTCGCCTTTCT 60.359 61.111 0.00 0.00 0.00 2.52
563 564 2.394563 GCTGTGCCTCGCCTTTCTC 61.395 63.158 0.00 0.00 0.00 2.87
564 565 2.048222 TGTGCCTCGCCTTTCTCG 60.048 61.111 0.00 0.00 0.00 4.04
565 566 2.815647 GTGCCTCGCCTTTCTCGG 60.816 66.667 0.00 0.00 0.00 4.63
566 567 3.311110 TGCCTCGCCTTTCTCGGT 61.311 61.111 0.00 0.00 0.00 4.69
567 568 2.815647 GCCTCGCCTTTCTCGGTG 60.816 66.667 0.00 0.00 35.88 4.94
568 569 2.125512 CCTCGCCTTTCTCGGTGG 60.126 66.667 0.00 0.00 35.28 4.61
569 570 2.657237 CTCGCCTTTCTCGGTGGT 59.343 61.111 0.00 0.00 35.28 4.16
570 571 1.446272 CTCGCCTTTCTCGGTGGTC 60.446 63.158 0.00 0.00 35.28 4.02
571 572 2.434359 CGCCTTTCTCGGTGGTCC 60.434 66.667 0.00 0.00 0.00 4.46
572 573 2.747686 GCCTTTCTCGGTGGTCCA 59.252 61.111 0.00 0.00 0.00 4.02
573 574 1.671379 GCCTTTCTCGGTGGTCCAC 60.671 63.158 14.13 14.13 0.00 4.02
574 575 2.058675 CCTTTCTCGGTGGTCCACT 58.941 57.895 21.40 0.00 34.40 4.00
575 576 0.320771 CCTTTCTCGGTGGTCCACTG 60.321 60.000 23.11 23.11 41.65 3.66
576 577 0.679505 CTTTCTCGGTGGTCCACTGA 59.320 55.000 28.24 28.24 45.99 3.41
577 578 0.391597 TTTCTCGGTGGTCCACTGAC 59.608 55.000 26.87 7.97 43.73 3.51
585 586 3.986006 GTCCACTGACCGCGGACA 61.986 66.667 35.90 31.30 46.98 4.02
586 587 3.680786 TCCACTGACCGCGGACAG 61.681 66.667 42.14 42.14 42.05 3.51
587 588 4.742201 CCACTGACCGCGGACAGG 62.742 72.222 44.24 34.93 40.99 4.00
588 589 4.742201 CACTGACCGCGGACAGGG 62.742 72.222 44.24 41.32 40.99 4.45
590 591 4.742201 CTGACCGCGGACAGGGTG 62.742 72.222 38.73 21.65 36.46 4.61
592 593 3.998672 GACCGCGGACAGGGTGAA 61.999 66.667 35.90 0.00 36.46 3.18
593 594 3.310860 GACCGCGGACAGGGTGAAT 62.311 63.158 35.90 4.22 36.46 2.57
594 595 1.952102 GACCGCGGACAGGGTGAATA 61.952 60.000 35.90 0.00 36.46 1.75
595 596 1.520787 CCGCGGACAGGGTGAATAC 60.521 63.158 24.07 0.00 0.00 1.89
596 597 1.515954 CGCGGACAGGGTGAATACT 59.484 57.895 0.00 0.00 0.00 2.12
597 598 0.742505 CGCGGACAGGGTGAATACTA 59.257 55.000 0.00 0.00 0.00 1.82
598 599 1.340248 CGCGGACAGGGTGAATACTAT 59.660 52.381 0.00 0.00 0.00 2.12
599 600 2.223971 CGCGGACAGGGTGAATACTATT 60.224 50.000 0.00 0.00 0.00 1.73
600 601 3.391049 GCGGACAGGGTGAATACTATTC 58.609 50.000 2.22 2.22 0.00 1.75
601 602 3.802675 GCGGACAGGGTGAATACTATTCC 60.803 52.174 6.37 0.00 0.00 3.01
602 603 3.641906 CGGACAGGGTGAATACTATTCCT 59.358 47.826 6.37 0.00 0.00 3.36
603 604 4.101119 CGGACAGGGTGAATACTATTCCTT 59.899 45.833 6.37 0.00 0.00 3.36
604 605 5.368989 GGACAGGGTGAATACTATTCCTTG 58.631 45.833 6.37 2.74 0.00 3.61
605 606 5.368989 GACAGGGTGAATACTATTCCTTGG 58.631 45.833 6.37 0.00 31.11 3.61
1153 1157 1.531739 GCCTTGGGCGAAAATCACCA 61.532 55.000 0.00 0.00 39.62 4.17
1265 1269 0.175302 CCTGATGAGTGCGAGCTTCT 59.825 55.000 0.00 0.00 0.00 2.85
1303 1308 0.403304 TGATGGCCATGGTAGGGGAT 60.403 55.000 26.56 0.00 0.00 3.85
1608 1616 4.225042 ACATGTGCTTATCTGAAGTGGGTA 59.775 41.667 0.00 0.00 0.00 3.69
1672 1680 3.008375 ACTTGCTGAAGAGAATGTGGCTA 59.992 43.478 0.00 0.00 32.98 3.93
1919 1939 4.054780 GTGAAACCAGTGACTCTGTACA 57.945 45.455 0.00 0.00 42.19 2.90
2093 2114 9.660180 TGGCTTGTTTACTTAACTGAAAATTTT 57.340 25.926 2.28 2.28 37.64 1.82
2401 2467 1.389609 GGCAGATCAACATGGGCAGG 61.390 60.000 0.00 0.00 0.00 4.85
2766 2837 4.430423 GGCGCAACGAGCACGAAG 62.430 66.667 11.40 3.03 46.13 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.595130 CGTAAAGGAAAAGGAAAAAGAGGAATG 59.405 37.037 0.00 0.00 0.00 2.67
1 2 7.658261 CGTAAAGGAAAAGGAAAAAGAGGAAT 58.342 34.615 0.00 0.00 0.00 3.01
2 3 6.460537 GCGTAAAGGAAAAGGAAAAAGAGGAA 60.461 38.462 0.00 0.00 0.00 3.36
3 4 5.009310 GCGTAAAGGAAAAGGAAAAAGAGGA 59.991 40.000 0.00 0.00 0.00 3.71
4 5 5.220381 GCGTAAAGGAAAAGGAAAAAGAGG 58.780 41.667 0.00 0.00 0.00 3.69
5 6 5.827666 TGCGTAAAGGAAAAGGAAAAAGAG 58.172 37.500 0.00 0.00 0.00 2.85
6 7 5.221165 CCTGCGTAAAGGAAAAGGAAAAAGA 60.221 40.000 0.00 0.00 40.02 2.52
7 8 4.982295 CCTGCGTAAAGGAAAAGGAAAAAG 59.018 41.667 0.00 0.00 40.02 2.27
8 9 4.738243 GCCTGCGTAAAGGAAAAGGAAAAA 60.738 41.667 5.27 0.00 40.02 1.94
9 10 3.243602 GCCTGCGTAAAGGAAAAGGAAAA 60.244 43.478 5.27 0.00 40.02 2.29
10 11 2.295070 GCCTGCGTAAAGGAAAAGGAAA 59.705 45.455 5.27 0.00 40.02 3.13
11 12 1.883926 GCCTGCGTAAAGGAAAAGGAA 59.116 47.619 5.27 0.00 40.02 3.36
12 13 1.530323 GCCTGCGTAAAGGAAAAGGA 58.470 50.000 5.27 0.00 40.02 3.36
13 14 0.168128 CGCCTGCGTAAAGGAAAAGG 59.832 55.000 2.83 0.00 40.02 3.11
14 15 3.676091 CGCCTGCGTAAAGGAAAAG 57.324 52.632 2.83 0.00 40.02 2.27
25 26 2.222953 GGATGTTAAGTTAACGCCTGCG 60.223 50.000 21.35 10.40 41.50 5.18
26 27 2.745281 TGGATGTTAAGTTAACGCCTGC 59.255 45.455 25.47 16.90 41.50 4.85
27 28 4.634004 TCATGGATGTTAAGTTAACGCCTG 59.366 41.667 25.47 21.54 41.50 4.85
28 29 4.839121 TCATGGATGTTAAGTTAACGCCT 58.161 39.130 25.47 13.66 41.50 5.52
29 30 5.554822 TTCATGGATGTTAAGTTAACGCC 57.445 39.130 21.63 21.63 41.50 5.68
39 40 9.585369 TGGCTCAATTTATATTCATGGATGTTA 57.415 29.630 0.00 0.00 0.00 2.41
40 41 8.481492 TGGCTCAATTTATATTCATGGATGTT 57.519 30.769 0.00 0.00 0.00 2.71
41 42 8.481492 TTGGCTCAATTTATATTCATGGATGT 57.519 30.769 0.00 0.00 0.00 3.06
42 43 8.033038 CCTTGGCTCAATTTATATTCATGGATG 58.967 37.037 0.00 0.00 0.00 3.51
43 44 7.179694 CCCTTGGCTCAATTTATATTCATGGAT 59.820 37.037 0.00 0.00 0.00 3.41
44 45 6.494491 CCCTTGGCTCAATTTATATTCATGGA 59.506 38.462 0.00 0.00 0.00 3.41
45 46 6.494491 TCCCTTGGCTCAATTTATATTCATGG 59.506 38.462 0.00 0.00 0.00 3.66
46 47 7.528996 TCCCTTGGCTCAATTTATATTCATG 57.471 36.000 0.00 0.00 0.00 3.07
47 48 7.310237 GCATCCCTTGGCTCAATTTATATTCAT 60.310 37.037 0.00 0.00 0.00 2.57
48 49 6.015180 GCATCCCTTGGCTCAATTTATATTCA 60.015 38.462 0.00 0.00 0.00 2.57
49 50 6.393171 GCATCCCTTGGCTCAATTTATATTC 58.607 40.000 0.00 0.00 0.00 1.75
50 51 5.047802 CGCATCCCTTGGCTCAATTTATATT 60.048 40.000 0.00 0.00 0.00 1.28
51 52 4.460382 CGCATCCCTTGGCTCAATTTATAT 59.540 41.667 0.00 0.00 0.00 0.86
52 53 3.820467 CGCATCCCTTGGCTCAATTTATA 59.180 43.478 0.00 0.00 0.00 0.98
53 54 2.624838 CGCATCCCTTGGCTCAATTTAT 59.375 45.455 0.00 0.00 0.00 1.40
54 55 2.023673 CGCATCCCTTGGCTCAATTTA 58.976 47.619 0.00 0.00 0.00 1.40
55 56 0.819582 CGCATCCCTTGGCTCAATTT 59.180 50.000 0.00 0.00 0.00 1.82
56 57 0.034186 TCGCATCCCTTGGCTCAATT 60.034 50.000 0.00 0.00 0.00 2.32
57 58 0.184451 ATCGCATCCCTTGGCTCAAT 59.816 50.000 0.00 0.00 0.00 2.57
58 59 0.836606 TATCGCATCCCTTGGCTCAA 59.163 50.000 0.00 0.00 0.00 3.02
59 60 0.106708 GTATCGCATCCCTTGGCTCA 59.893 55.000 0.00 0.00 0.00 4.26
60 61 0.106708 TGTATCGCATCCCTTGGCTC 59.893 55.000 0.00 0.00 0.00 4.70
61 62 0.546122 TTGTATCGCATCCCTTGGCT 59.454 50.000 0.00 0.00 0.00 4.75
62 63 1.388547 TTTGTATCGCATCCCTTGGC 58.611 50.000 0.00 0.00 0.00 4.52
63 64 3.189287 GCTATTTGTATCGCATCCCTTGG 59.811 47.826 0.00 0.00 0.00 3.61
64 65 4.067896 AGCTATTTGTATCGCATCCCTTG 58.932 43.478 0.00 0.00 0.00 3.61
65 66 4.202357 TGAGCTATTTGTATCGCATCCCTT 60.202 41.667 0.00 0.00 0.00 3.95
66 67 3.324846 TGAGCTATTTGTATCGCATCCCT 59.675 43.478 0.00 0.00 0.00 4.20
67 68 3.664107 TGAGCTATTTGTATCGCATCCC 58.336 45.455 0.00 0.00 0.00 3.85
68 69 4.560128 TCTGAGCTATTTGTATCGCATCC 58.440 43.478 0.00 0.00 0.00 3.51
69 70 5.119898 CCTTCTGAGCTATTTGTATCGCATC 59.880 44.000 0.00 0.00 0.00 3.91
70 71 4.993584 CCTTCTGAGCTATTTGTATCGCAT 59.006 41.667 0.00 0.00 0.00 4.73
71 72 4.141937 ACCTTCTGAGCTATTTGTATCGCA 60.142 41.667 0.00 0.00 0.00 5.10
72 73 4.372656 ACCTTCTGAGCTATTTGTATCGC 58.627 43.478 0.00 0.00 0.00 4.58
73 74 6.910536 AAACCTTCTGAGCTATTTGTATCG 57.089 37.500 0.00 0.00 0.00 2.92
74 75 7.226918 GGGTAAACCTTCTGAGCTATTTGTATC 59.773 40.741 0.00 0.00 35.85 2.24
75 76 7.054751 GGGTAAACCTTCTGAGCTATTTGTAT 58.945 38.462 0.00 0.00 35.85 2.29
76 77 6.412214 GGGTAAACCTTCTGAGCTATTTGTA 58.588 40.000 0.00 0.00 35.85 2.41
77 78 5.254115 GGGTAAACCTTCTGAGCTATTTGT 58.746 41.667 0.00 0.00 35.85 2.83
78 79 5.819825 GGGTAAACCTTCTGAGCTATTTG 57.180 43.478 0.00 0.00 35.85 2.32
92 93 4.362470 AAACACAGACCTAGGGTAAACC 57.638 45.455 14.81 0.00 35.25 3.27
93 94 7.500227 AGTTTTAAACACAGACCTAGGGTAAAC 59.500 37.037 14.81 8.41 35.25 2.01
94 95 7.576403 AGTTTTAAACACAGACCTAGGGTAAA 58.424 34.615 14.81 2.16 35.25 2.01
95 96 7.140522 AGTTTTAAACACAGACCTAGGGTAA 57.859 36.000 14.81 0.00 35.25 2.85
96 97 6.327104 TGAGTTTTAAACACAGACCTAGGGTA 59.673 38.462 14.81 0.00 35.25 3.69
97 98 5.131475 TGAGTTTTAAACACAGACCTAGGGT 59.869 40.000 14.81 0.00 39.44 4.34
98 99 5.617252 TGAGTTTTAAACACAGACCTAGGG 58.383 41.667 14.81 0.00 0.00 3.53
121 122 0.104120 TGAGCACGTGCAGTTACACT 59.896 50.000 39.21 18.62 45.16 3.55
122 123 0.232303 GTGAGCACGTGCAGTTACAC 59.768 55.000 39.21 30.79 45.16 2.90
123 124 2.600388 GTGAGCACGTGCAGTTACA 58.400 52.632 39.21 25.94 45.16 2.41
134 135 2.065993 ATGTCTGTGTACGTGAGCAC 57.934 50.000 0.00 5.54 36.26 4.40
135 136 2.554893 TGTATGTCTGTGTACGTGAGCA 59.445 45.455 0.00 0.00 0.00 4.26
136 137 2.915463 GTGTATGTCTGTGTACGTGAGC 59.085 50.000 0.00 0.00 0.00 4.26
137 138 4.083484 TGAGTGTATGTCTGTGTACGTGAG 60.083 45.833 0.00 0.00 0.00 3.51
138 139 3.816523 TGAGTGTATGTCTGTGTACGTGA 59.183 43.478 0.00 0.00 0.00 4.35
139 140 4.155310 TGAGTGTATGTCTGTGTACGTG 57.845 45.455 0.00 0.00 0.00 4.49
140 141 4.142447 GGATGAGTGTATGTCTGTGTACGT 60.142 45.833 0.00 0.00 0.00 3.57
141 142 4.352039 GGATGAGTGTATGTCTGTGTACG 58.648 47.826 0.00 0.00 0.00 3.67
142 143 4.142447 ACGGATGAGTGTATGTCTGTGTAC 60.142 45.833 0.00 0.00 0.00 2.90
143 144 4.014406 ACGGATGAGTGTATGTCTGTGTA 58.986 43.478 0.00 0.00 0.00 2.90
144 145 2.826128 ACGGATGAGTGTATGTCTGTGT 59.174 45.455 0.00 0.00 0.00 3.72
145 146 3.510388 ACGGATGAGTGTATGTCTGTG 57.490 47.619 0.00 0.00 0.00 3.66
146 147 4.887655 TCATACGGATGAGTGTATGTCTGT 59.112 41.667 6.12 0.00 45.15 3.41
147 148 5.438761 TCATACGGATGAGTGTATGTCTG 57.561 43.478 6.12 0.00 45.15 3.51
148 149 6.265422 TCATTCATACGGATGAGTGTATGTCT 59.735 38.462 26.80 0.00 45.45 3.41
149 150 6.447162 TCATTCATACGGATGAGTGTATGTC 58.553 40.000 26.80 0.00 45.45 3.06
150 151 6.405278 TCATTCATACGGATGAGTGTATGT 57.595 37.500 26.80 1.62 45.45 2.29
151 152 6.701400 TGTTCATTCATACGGATGAGTGTATG 59.299 38.462 26.80 19.53 45.45 2.39
152 153 6.701841 GTGTTCATTCATACGGATGAGTGTAT 59.298 38.462 26.80 9.51 45.45 2.29
153 154 6.040247 GTGTTCATTCATACGGATGAGTGTA 58.960 40.000 26.80 18.13 45.45 2.90
154 155 4.870426 GTGTTCATTCATACGGATGAGTGT 59.130 41.667 26.80 9.25 45.45 3.55
155 156 4.869861 TGTGTTCATTCATACGGATGAGTG 59.130 41.667 23.47 23.47 46.20 3.51
156 157 4.870426 GTGTGTTCATTCATACGGATGAGT 59.130 41.667 10.87 4.90 43.03 3.41
157 158 4.869861 TGTGTGTTCATTCATACGGATGAG 59.130 41.667 10.87 0.00 43.03 2.90
158 159 4.826556 TGTGTGTTCATTCATACGGATGA 58.173 39.130 6.12 6.12 40.45 2.92
159 160 5.544136 TTGTGTGTTCATTCATACGGATG 57.456 39.130 0.00 0.00 33.28 3.51
160 161 5.471797 TGTTTGTGTGTTCATTCATACGGAT 59.528 36.000 0.00 0.00 33.28 4.18
161 162 4.816925 TGTTTGTGTGTTCATTCATACGGA 59.183 37.500 0.00 0.00 33.28 4.69
162 163 5.102020 TGTTTGTGTGTTCATTCATACGG 57.898 39.130 0.00 0.00 33.28 4.02
163 164 5.794945 GGATGTTTGTGTGTTCATTCATACG 59.205 40.000 0.00 0.00 33.28 3.06
164 165 6.092748 GGGATGTTTGTGTGTTCATTCATAC 58.907 40.000 0.00 0.00 0.00 2.39
165 166 5.772169 TGGGATGTTTGTGTGTTCATTCATA 59.228 36.000 0.00 0.00 0.00 2.15
166 167 4.588106 TGGGATGTTTGTGTGTTCATTCAT 59.412 37.500 0.00 0.00 0.00 2.57
167 168 3.956848 TGGGATGTTTGTGTGTTCATTCA 59.043 39.130 0.00 0.00 0.00 2.57
168 169 4.582701 TGGGATGTTTGTGTGTTCATTC 57.417 40.909 0.00 0.00 0.00 2.67
169 170 4.834496 AGATGGGATGTTTGTGTGTTCATT 59.166 37.500 0.00 0.00 0.00 2.57
170 171 4.410099 AGATGGGATGTTTGTGTGTTCAT 58.590 39.130 0.00 0.00 0.00 2.57
171 172 3.820467 GAGATGGGATGTTTGTGTGTTCA 59.180 43.478 0.00 0.00 0.00 3.18
172 173 4.074970 AGAGATGGGATGTTTGTGTGTTC 58.925 43.478 0.00 0.00 0.00 3.18
173 174 4.104383 AGAGATGGGATGTTTGTGTGTT 57.896 40.909 0.00 0.00 0.00 3.32
174 175 3.795688 AGAGATGGGATGTTTGTGTGT 57.204 42.857 0.00 0.00 0.00 3.72
175 176 5.430886 TCATAGAGATGGGATGTTTGTGTG 58.569 41.667 0.00 0.00 33.49 3.82
176 177 5.698741 TCATAGAGATGGGATGTTTGTGT 57.301 39.130 0.00 0.00 33.49 3.72
177 178 5.882000 TGTTCATAGAGATGGGATGTTTGTG 59.118 40.000 0.00 0.00 33.49 3.33
178 179 6.065976 TGTTCATAGAGATGGGATGTTTGT 57.934 37.500 0.00 0.00 33.49 2.83
179 180 6.996879 AGATGTTCATAGAGATGGGATGTTTG 59.003 38.462 0.00 0.00 33.49 2.93
180 181 7.146715 AGATGTTCATAGAGATGGGATGTTT 57.853 36.000 0.00 0.00 33.49 2.83
181 182 6.760440 AGATGTTCATAGAGATGGGATGTT 57.240 37.500 0.00 0.00 33.49 2.71
182 183 6.239829 GGAAGATGTTCATAGAGATGGGATGT 60.240 42.308 4.83 0.00 33.93 3.06
183 184 6.171921 GGAAGATGTTCATAGAGATGGGATG 58.828 44.000 4.83 0.00 33.93 3.51
184 185 5.848369 TGGAAGATGTTCATAGAGATGGGAT 59.152 40.000 4.83 0.00 33.93 3.85
185 186 5.218959 TGGAAGATGTTCATAGAGATGGGA 58.781 41.667 4.83 0.00 33.93 4.37
186 187 5.306419 TCTGGAAGATGTTCATAGAGATGGG 59.694 44.000 4.83 0.00 38.67 4.00
187 188 6.416631 TCTGGAAGATGTTCATAGAGATGG 57.583 41.667 4.83 0.00 38.67 3.51
202 203 1.352083 CACTCCCCTTGTCTGGAAGA 58.648 55.000 0.00 0.00 43.69 2.87
203 204 0.322008 GCACTCCCCTTGTCTGGAAG 60.322 60.000 0.00 0.00 0.00 3.46
204 205 0.768221 AGCACTCCCCTTGTCTGGAA 60.768 55.000 0.00 0.00 0.00 3.53
205 206 1.152030 AGCACTCCCCTTGTCTGGA 60.152 57.895 0.00 0.00 0.00 3.86
206 207 1.002868 CAGCACTCCCCTTGTCTGG 60.003 63.158 0.00 0.00 0.00 3.86
207 208 0.036577 CTCAGCACTCCCCTTGTCTG 60.037 60.000 0.00 0.00 0.00 3.51
208 209 0.178921 TCTCAGCACTCCCCTTGTCT 60.179 55.000 0.00 0.00 0.00 3.41
209 210 0.908198 ATCTCAGCACTCCCCTTGTC 59.092 55.000 0.00 0.00 0.00 3.18
210 211 0.617413 CATCTCAGCACTCCCCTTGT 59.383 55.000 0.00 0.00 0.00 3.16
211 212 0.747283 GCATCTCAGCACTCCCCTTG 60.747 60.000 0.00 0.00 0.00 3.61
212 213 1.606531 GCATCTCAGCACTCCCCTT 59.393 57.895 0.00 0.00 0.00 3.95
213 214 2.729479 CGCATCTCAGCACTCCCCT 61.729 63.158 0.00 0.00 0.00 4.79
214 215 1.676678 TACGCATCTCAGCACTCCCC 61.677 60.000 0.00 0.00 0.00 4.81
215 216 0.528684 GTACGCATCTCAGCACTCCC 60.529 60.000 0.00 0.00 0.00 4.30
216 217 0.173481 TGTACGCATCTCAGCACTCC 59.827 55.000 0.00 0.00 0.00 3.85
217 218 1.272781 GTGTACGCATCTCAGCACTC 58.727 55.000 0.39 0.00 0.00 3.51
218 219 0.108615 GGTGTACGCATCTCAGCACT 60.109 55.000 8.97 0.00 0.00 4.40
219 220 0.108615 AGGTGTACGCATCTCAGCAC 60.109 55.000 8.97 0.00 27.80 4.40
220 221 2.276869 AGGTGTACGCATCTCAGCA 58.723 52.632 8.97 0.00 27.80 4.41
225 226 4.530710 TTTGTTAGAGGTGTACGCATCT 57.469 40.909 25.01 25.01 39.10 2.90
226 227 5.379827 GTTTTTGTTAGAGGTGTACGCATC 58.620 41.667 12.99 12.99 0.00 3.91
227 228 4.084223 CGTTTTTGTTAGAGGTGTACGCAT 60.084 41.667 8.97 0.00 0.00 4.73
228 229 3.245754 CGTTTTTGTTAGAGGTGTACGCA 59.754 43.478 8.97 0.00 0.00 5.24
229 230 3.791175 CGTTTTTGTTAGAGGTGTACGC 58.209 45.455 0.00 0.00 0.00 4.42
230 231 3.363280 GGCGTTTTTGTTAGAGGTGTACG 60.363 47.826 0.00 0.00 0.00 3.67
231 232 3.058708 GGGCGTTTTTGTTAGAGGTGTAC 60.059 47.826 0.00 0.00 0.00 2.90
232 233 3.140623 GGGCGTTTTTGTTAGAGGTGTA 58.859 45.455 0.00 0.00 0.00 2.90
233 234 1.951602 GGGCGTTTTTGTTAGAGGTGT 59.048 47.619 0.00 0.00 0.00 4.16
234 235 1.069500 CGGGCGTTTTTGTTAGAGGTG 60.069 52.381 0.00 0.00 0.00 4.00
235 236 1.232119 CGGGCGTTTTTGTTAGAGGT 58.768 50.000 0.00 0.00 0.00 3.85
236 237 0.519961 CCGGGCGTTTTTGTTAGAGG 59.480 55.000 0.00 0.00 0.00 3.69
237 238 0.109919 GCCGGGCGTTTTTGTTAGAG 60.110 55.000 1.81 0.00 0.00 2.43
238 239 1.950758 GCCGGGCGTTTTTGTTAGA 59.049 52.632 1.81 0.00 0.00 2.10
239 240 4.544762 GCCGGGCGTTTTTGTTAG 57.455 55.556 1.81 0.00 0.00 2.34
252 253 3.629883 TACGTACAACCTGCGCCGG 62.630 63.158 17.13 17.13 0.00 6.13
253 254 2.126385 TACGTACAACCTGCGCCG 60.126 61.111 4.18 0.00 0.00 6.46
254 255 0.179119 ATCTACGTACAACCTGCGCC 60.179 55.000 4.18 0.00 0.00 6.53
255 256 1.636988 AATCTACGTACAACCTGCGC 58.363 50.000 0.00 0.00 0.00 6.09
256 257 5.961395 AATAAATCTACGTACAACCTGCG 57.039 39.130 0.00 0.00 0.00 5.18
257 258 8.813643 ATCTAATAAATCTACGTACAACCTGC 57.186 34.615 0.00 0.00 0.00 4.85
266 267 9.745880 CCACTTGTGTATCTAATAAATCTACGT 57.254 33.333 0.00 0.00 0.00 3.57
267 268 9.961265 TCCACTTGTGTATCTAATAAATCTACG 57.039 33.333 0.00 0.00 0.00 3.51
279 280 9.911788 AAGATATTTGATTCCACTTGTGTATCT 57.088 29.630 11.57 7.21 0.00 1.98
282 283 8.956426 GGAAAGATATTTGATTCCACTTGTGTA 58.044 33.333 0.00 0.00 40.81 2.90
283 284 7.362056 CGGAAAGATATTTGATTCCACTTGTGT 60.362 37.037 0.00 0.00 41.11 3.72
284 285 6.968904 CGGAAAGATATTTGATTCCACTTGTG 59.031 38.462 0.00 0.00 41.11 3.33
285 286 6.095440 CCGGAAAGATATTTGATTCCACTTGT 59.905 38.462 0.00 0.00 41.11 3.16
286 287 6.318648 TCCGGAAAGATATTTGATTCCACTTG 59.681 38.462 0.00 0.00 41.11 3.16
287 288 6.423182 TCCGGAAAGATATTTGATTCCACTT 58.577 36.000 0.00 0.00 41.11 3.16
288 289 6.001449 TCCGGAAAGATATTTGATTCCACT 57.999 37.500 0.00 0.00 41.11 4.00
289 290 6.672147 CATCCGGAAAGATATTTGATTCCAC 58.328 40.000 9.01 0.00 41.11 4.02
290 291 5.241506 GCATCCGGAAAGATATTTGATTCCA 59.758 40.000 9.01 0.00 41.11 3.53
291 292 5.241506 TGCATCCGGAAAGATATTTGATTCC 59.758 40.000 9.01 0.00 38.35 3.01
292 293 6.145535 GTGCATCCGGAAAGATATTTGATTC 58.854 40.000 9.01 0.00 0.00 2.52
293 294 5.010012 GGTGCATCCGGAAAGATATTTGATT 59.990 40.000 9.01 0.00 0.00 2.57
294 295 4.520492 GGTGCATCCGGAAAGATATTTGAT 59.480 41.667 9.01 0.00 0.00 2.57
295 296 3.882888 GGTGCATCCGGAAAGATATTTGA 59.117 43.478 9.01 0.00 0.00 2.69
296 297 3.631686 TGGTGCATCCGGAAAGATATTTG 59.368 43.478 9.01 0.00 39.52 2.32
297 298 3.632145 GTGGTGCATCCGGAAAGATATTT 59.368 43.478 9.01 0.00 39.52 1.40
298 299 3.214328 GTGGTGCATCCGGAAAGATATT 58.786 45.455 9.01 0.00 39.52 1.28
299 300 2.172505 TGTGGTGCATCCGGAAAGATAT 59.827 45.455 9.01 0.00 39.52 1.63
300 301 1.557371 TGTGGTGCATCCGGAAAGATA 59.443 47.619 9.01 0.00 39.52 1.98
301 302 0.327924 TGTGGTGCATCCGGAAAGAT 59.672 50.000 9.01 0.00 39.52 2.40
302 303 0.109532 TTGTGGTGCATCCGGAAAGA 59.890 50.000 9.01 0.00 39.52 2.52
303 304 0.523072 CTTGTGGTGCATCCGGAAAG 59.477 55.000 9.01 5.40 39.52 2.62
304 305 1.523154 GCTTGTGGTGCATCCGGAAA 61.523 55.000 9.01 0.00 39.52 3.13
305 306 1.971167 GCTTGTGGTGCATCCGGAA 60.971 57.895 9.01 0.00 39.52 4.30
306 307 2.359850 GCTTGTGGTGCATCCGGA 60.360 61.111 6.61 6.61 39.52 5.14
307 308 1.597797 ATTGCTTGTGGTGCATCCGG 61.598 55.000 0.00 0.00 40.34 5.14
308 309 0.244450 AATTGCTTGTGGTGCATCCG 59.756 50.000 0.00 0.00 40.34 4.18
309 310 1.001181 ACAATTGCTTGTGGTGCATCC 59.999 47.619 5.05 0.00 43.92 3.51
310 311 2.443887 ACAATTGCTTGTGGTGCATC 57.556 45.000 5.05 0.00 43.92 3.91
311 312 2.914695 AACAATTGCTTGTGGTGCAT 57.085 40.000 5.05 0.00 44.83 3.96
312 313 3.573538 AGATAACAATTGCTTGTGGTGCA 59.426 39.130 5.05 0.00 44.83 4.57
313 314 4.178545 AGATAACAATTGCTTGTGGTGC 57.821 40.909 5.05 0.00 44.83 5.01
314 315 4.386652 GCAAGATAACAATTGCTTGTGGTG 59.613 41.667 18.68 7.08 44.83 4.17
315 316 4.559153 GCAAGATAACAATTGCTTGTGGT 58.441 39.130 18.68 0.00 44.83 4.16
322 323 4.717991 TGTACACGCAAGATAACAATTGC 58.282 39.130 5.05 0.00 46.53 3.56
323 324 5.323900 CCTGTACACGCAAGATAACAATTG 58.676 41.667 3.24 3.24 43.62 2.32
324 325 4.142687 GCCTGTACACGCAAGATAACAATT 60.143 41.667 11.39 0.00 43.62 2.32
325 326 3.374058 GCCTGTACACGCAAGATAACAAT 59.626 43.478 11.39 0.00 43.62 2.71
326 327 2.739913 GCCTGTACACGCAAGATAACAA 59.260 45.455 11.39 0.00 43.62 2.83
327 328 2.343101 GCCTGTACACGCAAGATAACA 58.657 47.619 11.39 0.00 43.62 2.41
328 329 1.323534 CGCCTGTACACGCAAGATAAC 59.676 52.381 15.65 0.00 43.62 1.89
329 330 1.067425 ACGCCTGTACACGCAAGATAA 60.067 47.619 15.65 0.00 43.62 1.75
330 331 0.528924 ACGCCTGTACACGCAAGATA 59.471 50.000 15.65 0.00 43.62 1.98
331 332 1.014044 CACGCCTGTACACGCAAGAT 61.014 55.000 15.65 0.00 43.62 2.40
332 333 1.663388 CACGCCTGTACACGCAAGA 60.663 57.895 15.65 0.00 43.62 3.02
334 335 1.005512 ATCACGCCTGTACACGCAA 60.006 52.632 15.65 2.69 0.00 4.85
335 336 1.445410 GATCACGCCTGTACACGCA 60.445 57.895 15.65 0.16 0.00 5.24
336 337 0.736325 AAGATCACGCCTGTACACGC 60.736 55.000 6.76 6.76 0.00 5.34
337 338 1.390123 CAAAGATCACGCCTGTACACG 59.610 52.381 4.48 4.48 0.00 4.49
338 339 2.157668 CACAAAGATCACGCCTGTACAC 59.842 50.000 0.00 0.00 0.00 2.90
339 340 2.224185 ACACAAAGATCACGCCTGTACA 60.224 45.455 0.00 0.00 0.00 2.90
340 341 2.413837 ACACAAAGATCACGCCTGTAC 58.586 47.619 0.00 0.00 0.00 2.90
341 342 2.805671 CAACACAAAGATCACGCCTGTA 59.194 45.455 0.00 0.00 0.00 2.74
342 343 1.603802 CAACACAAAGATCACGCCTGT 59.396 47.619 0.00 0.00 0.00 4.00
343 344 1.664016 GCAACACAAAGATCACGCCTG 60.664 52.381 0.00 0.00 0.00 4.85
344 345 0.593128 GCAACACAAAGATCACGCCT 59.407 50.000 0.00 0.00 0.00 5.52
345 346 0.593128 AGCAACACAAAGATCACGCC 59.407 50.000 0.00 0.00 0.00 5.68
346 347 1.264020 TCAGCAACACAAAGATCACGC 59.736 47.619 0.00 0.00 0.00 5.34
347 348 2.663879 GCTCAGCAACACAAAGATCACG 60.664 50.000 0.00 0.00 0.00 4.35
348 349 2.663879 CGCTCAGCAACACAAAGATCAC 60.664 50.000 0.00 0.00 0.00 3.06
349 350 1.532437 CGCTCAGCAACACAAAGATCA 59.468 47.619 0.00 0.00 0.00 2.92
350 351 1.532868 ACGCTCAGCAACACAAAGATC 59.467 47.619 0.00 0.00 0.00 2.75
351 352 1.532868 GACGCTCAGCAACACAAAGAT 59.467 47.619 0.00 0.00 0.00 2.40
352 353 0.937304 GACGCTCAGCAACACAAAGA 59.063 50.000 0.00 0.00 0.00 2.52
353 354 0.383491 CGACGCTCAGCAACACAAAG 60.383 55.000 0.00 0.00 0.00 2.77
354 355 1.641140 CGACGCTCAGCAACACAAA 59.359 52.632 0.00 0.00 0.00 2.83
355 356 2.243957 CCGACGCTCAGCAACACAA 61.244 57.895 0.00 0.00 0.00 3.33
356 357 2.661537 CCGACGCTCAGCAACACA 60.662 61.111 0.00 0.00 0.00 3.72
357 358 2.355837 TCCGACGCTCAGCAACAC 60.356 61.111 0.00 0.00 0.00 3.32
358 359 1.877576 ATCTCCGACGCTCAGCAACA 61.878 55.000 0.00 0.00 0.00 3.33
359 360 0.100682 TATCTCCGACGCTCAGCAAC 59.899 55.000 0.00 0.00 0.00 4.17
360 361 0.100682 GTATCTCCGACGCTCAGCAA 59.899 55.000 0.00 0.00 0.00 3.91
361 362 0.748367 AGTATCTCCGACGCTCAGCA 60.748 55.000 0.00 0.00 0.00 4.41
362 363 0.317436 CAGTATCTCCGACGCTCAGC 60.317 60.000 0.00 0.00 0.00 4.26
363 364 1.300481 TCAGTATCTCCGACGCTCAG 58.700 55.000 0.00 0.00 0.00 3.35
364 365 1.400846 GTTCAGTATCTCCGACGCTCA 59.599 52.381 0.00 0.00 0.00 4.26
365 366 1.595003 CGTTCAGTATCTCCGACGCTC 60.595 57.143 0.00 0.00 0.00 5.03
366 367 0.377554 CGTTCAGTATCTCCGACGCT 59.622 55.000 0.00 0.00 0.00 5.07
367 368 0.376152 TCGTTCAGTATCTCCGACGC 59.624 55.000 0.00 0.00 0.00 5.19
368 369 2.350804 TCTTCGTTCAGTATCTCCGACG 59.649 50.000 0.00 0.00 0.00 5.12
369 370 4.094590 TCTTCTTCGTTCAGTATCTCCGAC 59.905 45.833 0.00 0.00 0.00 4.79
370 371 4.259356 TCTTCTTCGTTCAGTATCTCCGA 58.741 43.478 0.00 0.00 0.00 4.55
371 372 4.617808 TCTTCTTCGTTCAGTATCTCCG 57.382 45.455 0.00 0.00 0.00 4.63
372 373 7.653767 TTTTTCTTCTTCGTTCAGTATCTCC 57.346 36.000 0.00 0.00 0.00 3.71
393 394 0.099791 CCCGCGCGGTTGATATTTTT 59.900 50.000 43.12 0.00 0.00 1.94
394 395 0.745128 TCCCGCGCGGTTGATATTTT 60.745 50.000 43.12 0.00 0.00 1.82
395 396 1.153329 TCCCGCGCGGTTGATATTT 60.153 52.632 43.12 0.00 0.00 1.40
396 397 1.594293 CTCCCGCGCGGTTGATATT 60.594 57.895 43.12 0.00 0.00 1.28
397 398 2.029073 CTCCCGCGCGGTTGATAT 59.971 61.111 43.12 0.00 0.00 1.63
398 399 4.215742 CCTCCCGCGCGGTTGATA 62.216 66.667 43.12 23.29 0.00 2.15
407 408 4.742201 CACACTCCACCTCCCGCG 62.742 72.222 0.00 0.00 0.00 6.46
408 409 4.394712 CCACACTCCACCTCCCGC 62.395 72.222 0.00 0.00 0.00 6.13
409 410 4.394712 GCCACACTCCACCTCCCG 62.395 72.222 0.00 0.00 0.00 5.14
410 411 2.069165 AAAGCCACACTCCACCTCCC 62.069 60.000 0.00 0.00 0.00 4.30
411 412 0.890996 CAAAGCCACACTCCACCTCC 60.891 60.000 0.00 0.00 0.00 4.30
412 413 0.890996 CCAAAGCCACACTCCACCTC 60.891 60.000 0.00 0.00 0.00 3.85
413 414 1.151450 CCAAAGCCACACTCCACCT 59.849 57.895 0.00 0.00 0.00 4.00
414 415 0.467290 TTCCAAAGCCACACTCCACC 60.467 55.000 0.00 0.00 0.00 4.61
415 416 0.668535 GTTCCAAAGCCACACTCCAC 59.331 55.000 0.00 0.00 0.00 4.02
416 417 0.817634 CGTTCCAAAGCCACACTCCA 60.818 55.000 0.00 0.00 0.00 3.86
417 418 0.534203 TCGTTCCAAAGCCACACTCC 60.534 55.000 0.00 0.00 0.00 3.85
418 419 0.868406 CTCGTTCCAAAGCCACACTC 59.132 55.000 0.00 0.00 0.00 3.51
419 420 0.468226 TCTCGTTCCAAAGCCACACT 59.532 50.000 0.00 0.00 0.00 3.55
420 421 1.305201 TTCTCGTTCCAAAGCCACAC 58.695 50.000 0.00 0.00 0.00 3.82
421 422 2.045561 TTTCTCGTTCCAAAGCCACA 57.954 45.000 0.00 0.00 0.00 4.17
422 423 2.098443 TGTTTTCTCGTTCCAAAGCCAC 59.902 45.455 0.00 0.00 0.00 5.01
423 424 2.370349 TGTTTTCTCGTTCCAAAGCCA 58.630 42.857 0.00 0.00 0.00 4.75
424 425 3.430333 TTGTTTTCTCGTTCCAAAGCC 57.570 42.857 0.00 0.00 0.00 4.35
425 426 5.727249 CATTTTGTTTTCTCGTTCCAAAGC 58.273 37.500 0.00 0.00 0.00 3.51
426 427 5.276820 GGCATTTTGTTTTCTCGTTCCAAAG 60.277 40.000 0.00 0.00 0.00 2.77
427 428 4.568760 GGCATTTTGTTTTCTCGTTCCAAA 59.431 37.500 0.00 0.00 0.00 3.28
428 429 4.116238 GGCATTTTGTTTTCTCGTTCCAA 58.884 39.130 0.00 0.00 0.00 3.53
429 430 3.383185 AGGCATTTTGTTTTCTCGTTCCA 59.617 39.130 0.00 0.00 0.00 3.53
430 431 3.735746 CAGGCATTTTGTTTTCTCGTTCC 59.264 43.478 0.00 0.00 0.00 3.62
431 432 3.182372 GCAGGCATTTTGTTTTCTCGTTC 59.818 43.478 0.00 0.00 0.00 3.95
432 433 3.123050 GCAGGCATTTTGTTTTCTCGTT 58.877 40.909 0.00 0.00 0.00 3.85
433 434 2.545742 GGCAGGCATTTTGTTTTCTCGT 60.546 45.455 0.00 0.00 0.00 4.18
434 435 2.061028 GGCAGGCATTTTGTTTTCTCG 58.939 47.619 0.00 0.00 0.00 4.04
435 436 3.391506 AGGCAGGCATTTTGTTTTCTC 57.608 42.857 0.00 0.00 0.00 2.87
436 437 3.843893 AAGGCAGGCATTTTGTTTTCT 57.156 38.095 0.00 0.00 0.00 2.52
437 438 4.261155 GGAAAAGGCAGGCATTTTGTTTTC 60.261 41.667 19.62 13.02 39.53 2.29
438 439 3.631686 GGAAAAGGCAGGCATTTTGTTTT 59.368 39.130 19.62 5.59 39.53 2.43
439 440 3.117926 AGGAAAAGGCAGGCATTTTGTTT 60.118 39.130 19.62 4.14 39.53 2.83
440 441 2.439135 AGGAAAAGGCAGGCATTTTGTT 59.561 40.909 19.62 6.33 39.53 2.83
441 442 2.049372 AGGAAAAGGCAGGCATTTTGT 58.951 42.857 19.62 5.73 39.53 2.83
442 443 2.419667 CAGGAAAAGGCAGGCATTTTG 58.580 47.619 19.62 4.54 39.53 2.44
443 444 1.348696 CCAGGAAAAGGCAGGCATTTT 59.651 47.619 15.43 15.43 41.64 1.82
444 445 0.978907 CCAGGAAAAGGCAGGCATTT 59.021 50.000 0.00 0.00 0.00 2.32
445 446 0.906282 CCCAGGAAAAGGCAGGCATT 60.906 55.000 0.00 0.00 0.00 3.56
446 447 1.305549 CCCAGGAAAAGGCAGGCAT 60.306 57.895 0.00 0.00 0.00 4.40
447 448 2.118076 CCCAGGAAAAGGCAGGCA 59.882 61.111 0.00 0.00 0.00 4.75
448 449 2.118294 ACCCAGGAAAAGGCAGGC 59.882 61.111 0.00 0.00 0.00 4.85
449 450 2.278330 GCACCCAGGAAAAGGCAGG 61.278 63.158 0.00 0.00 0.00 4.85
450 451 2.629656 CGCACCCAGGAAAAGGCAG 61.630 63.158 0.00 0.00 0.00 4.85
451 452 2.597217 CGCACCCAGGAAAAGGCA 60.597 61.111 0.00 0.00 0.00 4.75
452 453 3.373565 CCGCACCCAGGAAAAGGC 61.374 66.667 0.00 0.00 0.00 4.35
453 454 2.132089 TACCCGCACCCAGGAAAAGG 62.132 60.000 0.00 0.00 0.00 3.11
454 455 0.958876 GTACCCGCACCCAGGAAAAG 60.959 60.000 0.00 0.00 0.00 2.27
455 456 1.073548 GTACCCGCACCCAGGAAAA 59.926 57.895 0.00 0.00 0.00 2.29
456 457 2.148052 TGTACCCGCACCCAGGAAA 61.148 57.895 0.00 0.00 0.00 3.13
457 458 2.527123 TGTACCCGCACCCAGGAA 60.527 61.111 0.00 0.00 0.00 3.36
458 459 3.315949 GTGTACCCGCACCCAGGA 61.316 66.667 0.00 0.00 33.53 3.86
459 460 4.752879 CGTGTACCCGCACCCAGG 62.753 72.222 0.00 0.00 36.08 4.45
460 461 4.752879 CCGTGTACCCGCACCCAG 62.753 72.222 0.00 0.00 36.08 4.45
462 463 3.534054 TTTCCGTGTACCCGCACCC 62.534 63.158 0.00 0.00 36.08 4.61
463 464 2.030862 TTTCCGTGTACCCGCACC 59.969 61.111 0.00 0.00 36.08 5.01
464 465 2.030958 CCTTTCCGTGTACCCGCAC 61.031 63.158 0.00 0.00 36.12 5.34
465 466 2.162338 CTCCTTTCCGTGTACCCGCA 62.162 60.000 0.00 0.00 0.00 5.69
466 467 1.447314 CTCCTTTCCGTGTACCCGC 60.447 63.158 0.00 0.00 0.00 6.13
467 468 0.389426 CACTCCTTTCCGTGTACCCG 60.389 60.000 0.00 0.00 0.00 5.28
468 469 0.971386 TCACTCCTTTCCGTGTACCC 59.029 55.000 0.00 0.00 33.07 3.69
469 470 1.668047 CGTCACTCCTTTCCGTGTACC 60.668 57.143 0.00 0.00 33.07 3.34
470 471 1.267806 TCGTCACTCCTTTCCGTGTAC 59.732 52.381 0.00 0.00 33.07 2.90
471 472 1.608055 TCGTCACTCCTTTCCGTGTA 58.392 50.000 0.00 0.00 33.07 2.90
472 473 0.748450 TTCGTCACTCCTTTCCGTGT 59.252 50.000 0.00 0.00 33.07 4.49
473 474 1.137513 GTTCGTCACTCCTTTCCGTG 58.862 55.000 0.00 0.00 0.00 4.94
474 475 0.748450 TGTTCGTCACTCCTTTCCGT 59.252 50.000 0.00 0.00 0.00 4.69
475 476 1.137513 GTGTTCGTCACTCCTTTCCG 58.862 55.000 6.33 0.00 43.13 4.30
476 477 1.137513 CGTGTTCGTCACTCCTTTCC 58.862 55.000 10.48 0.00 44.16 3.13
488 489 1.386293 CGTCTCTGCGTACGTGTTCG 61.386 60.000 17.90 10.55 43.34 3.95
489 490 1.662845 GCGTCTCTGCGTACGTGTTC 61.663 60.000 17.90 0.00 41.10 3.18
490 491 1.728426 GCGTCTCTGCGTACGTGTT 60.728 57.895 17.90 0.00 41.10 3.32
491 492 2.126965 GCGTCTCTGCGTACGTGT 60.127 61.111 17.90 0.00 41.10 4.49
492 493 2.874780 GGCGTCTCTGCGTACGTG 60.875 66.667 17.90 10.40 41.10 4.49
493 494 3.359523 TGGCGTCTCTGCGTACGT 61.360 61.111 17.90 0.00 41.10 3.57
494 495 2.874780 GTGGCGTCTCTGCGTACG 60.875 66.667 11.84 11.84 41.92 3.67
495 496 2.874780 CGTGGCGTCTCTGCGTAC 60.875 66.667 0.00 0.00 35.06 3.67
496 497 4.771356 GCGTGGCGTCTCTGCGTA 62.771 66.667 0.00 0.00 35.06 4.42
513 514 4.115199 CAGGGAGGGGGAAAGCGG 62.115 72.222 0.00 0.00 0.00 5.52
514 515 1.972660 CTACAGGGAGGGGGAAAGCG 61.973 65.000 0.00 0.00 0.00 4.68
515 516 0.620700 TCTACAGGGAGGGGGAAAGC 60.621 60.000 0.00 0.00 0.00 3.51
516 517 1.966845 TTCTACAGGGAGGGGGAAAG 58.033 55.000 0.00 0.00 0.00 2.62
517 518 2.488836 GATTCTACAGGGAGGGGGAAA 58.511 52.381 0.00 0.00 0.00 3.13
518 519 1.691482 CGATTCTACAGGGAGGGGGAA 60.691 57.143 0.00 0.00 0.00 3.97
519 520 0.105658 CGATTCTACAGGGAGGGGGA 60.106 60.000 0.00 0.00 0.00 4.81
520 521 1.759459 GCGATTCTACAGGGAGGGGG 61.759 65.000 0.00 0.00 0.00 5.40
521 522 0.760945 AGCGATTCTACAGGGAGGGG 60.761 60.000 0.00 0.00 0.00 4.79
522 523 1.123928 AAGCGATTCTACAGGGAGGG 58.876 55.000 0.00 0.00 0.00 4.30
523 524 2.555199 CAAAGCGATTCTACAGGGAGG 58.445 52.381 0.00 0.00 0.00 4.30
524 525 2.555199 CCAAAGCGATTCTACAGGGAG 58.445 52.381 0.00 0.00 0.00 4.30
525 526 1.209504 CCCAAAGCGATTCTACAGGGA 59.790 52.381 0.00 0.00 34.14 4.20
526 527 1.668419 CCCAAAGCGATTCTACAGGG 58.332 55.000 0.00 0.00 0.00 4.45
527 528 1.017387 GCCCAAAGCGATTCTACAGG 58.983 55.000 0.00 0.00 0.00 4.00
545 546 2.359230 AGAAAGGCGAGGCACAGC 60.359 61.111 0.00 0.00 0.00 4.40
546 547 2.097038 CGAGAAAGGCGAGGCACAG 61.097 63.158 0.00 0.00 0.00 3.66
547 548 2.048222 CGAGAAAGGCGAGGCACA 60.048 61.111 0.00 0.00 0.00 4.57
548 549 2.815647 CCGAGAAAGGCGAGGCAC 60.816 66.667 0.00 0.00 0.00 5.01
549 550 3.311110 ACCGAGAAAGGCGAGGCA 61.311 61.111 0.00 0.00 33.69 4.75
550 551 2.815647 CACCGAGAAAGGCGAGGC 60.816 66.667 0.00 0.00 33.69 4.70
551 552 2.125512 CCACCGAGAAAGGCGAGG 60.126 66.667 0.00 0.00 33.69 4.63
552 553 1.446272 GACCACCGAGAAAGGCGAG 60.446 63.158 0.00 0.00 33.69 5.03
553 554 2.654877 GACCACCGAGAAAGGCGA 59.345 61.111 0.00 0.00 33.69 5.54
554 555 2.434359 GGACCACCGAGAAAGGCG 60.434 66.667 0.00 0.00 33.69 5.52
555 556 1.671379 GTGGACCACCGAGAAAGGC 60.671 63.158 14.16 0.00 39.42 4.35
556 557 0.320771 CAGTGGACCACCGAGAAAGG 60.321 60.000 21.32 0.00 39.42 3.11
557 558 0.679505 TCAGTGGACCACCGAGAAAG 59.320 55.000 21.32 3.21 39.42 2.62
558 559 0.391597 GTCAGTGGACCACCGAGAAA 59.608 55.000 21.32 0.00 38.12 2.52
559 560 2.046938 GTCAGTGGACCACCGAGAA 58.953 57.895 21.32 0.00 38.12 2.87
560 561 3.773370 GTCAGTGGACCACCGAGA 58.227 61.111 21.32 13.73 38.12 4.04
571 572 4.742201 CCCTGTCCGCGGTCAGTG 62.742 72.222 37.86 29.32 31.18 3.66
573 574 4.742201 CACCCTGTCCGCGGTCAG 62.742 72.222 35.78 35.78 0.00 3.51
575 576 1.952102 TATTCACCCTGTCCGCGGTC 61.952 60.000 27.15 21.30 0.00 4.79
576 577 1.985662 TATTCACCCTGTCCGCGGT 60.986 57.895 27.15 0.06 0.00 5.68
577 578 1.520787 GTATTCACCCTGTCCGCGG 60.521 63.158 22.12 22.12 0.00 6.46
578 579 0.742505 TAGTATTCACCCTGTCCGCG 59.257 55.000 0.00 0.00 0.00 6.46
579 580 3.391049 GAATAGTATTCACCCTGTCCGC 58.609 50.000 16.50 0.00 0.00 5.54
580 581 3.641906 AGGAATAGTATTCACCCTGTCCG 59.358 47.826 21.56 0.00 0.00 4.79
581 582 5.368989 CAAGGAATAGTATTCACCCTGTCC 58.631 45.833 21.56 5.37 0.00 4.02
582 583 5.368989 CCAAGGAATAGTATTCACCCTGTC 58.631 45.833 21.56 5.36 0.00 3.51
583 584 4.166144 CCCAAGGAATAGTATTCACCCTGT 59.834 45.833 21.56 2.89 0.00 4.00
584 585 4.412199 TCCCAAGGAATAGTATTCACCCTG 59.588 45.833 21.56 12.91 0.00 4.45
585 586 4.641868 TCCCAAGGAATAGTATTCACCCT 58.358 43.478 21.56 9.86 0.00 4.34
586 587 4.412528 ACTCCCAAGGAATAGTATTCACCC 59.587 45.833 21.56 7.88 0.00 4.61
587 588 5.632034 ACTCCCAAGGAATAGTATTCACC 57.368 43.478 21.56 8.53 0.00 4.02
590 591 9.722184 GGTATTAACTCCCAAGGAATAGTATTC 57.278 37.037 13.60 13.60 0.00 1.75
591 592 9.232882 TGGTATTAACTCCCAAGGAATAGTATT 57.767 33.333 0.00 0.00 0.00 1.89
592 593 8.808240 TGGTATTAACTCCCAAGGAATAGTAT 57.192 34.615 0.00 0.00 0.00 2.12
593 594 8.808240 ATGGTATTAACTCCCAAGGAATAGTA 57.192 34.615 0.00 0.00 0.00 1.82
594 595 7.707467 ATGGTATTAACTCCCAAGGAATAGT 57.293 36.000 0.00 0.00 0.00 2.12
597 598 9.367160 CAATAATGGTATTAACTCCCAAGGAAT 57.633 33.333 0.00 0.00 0.00 3.01
598 599 8.561769 TCAATAATGGTATTAACTCCCAAGGAA 58.438 33.333 0.00 0.00 0.00 3.36
599 600 8.108378 TCAATAATGGTATTAACTCCCAAGGA 57.892 34.615 0.00 0.00 0.00 3.36
600 601 8.940397 ATCAATAATGGTATTAACTCCCAAGG 57.060 34.615 0.00 0.00 0.00 3.61
994 998 0.179000 GTGCACCCCTTCATCTCGAT 59.821 55.000 5.22 0.00 0.00 3.59
1153 1157 0.684479 TCCATGTAGCGCACCTCTCT 60.684 55.000 11.47 0.00 0.00 3.10
1265 1269 6.535865 GCCATCAAATCAAATGTTAGCATCAA 59.464 34.615 0.00 0.00 33.50 2.57
1303 1308 5.009210 CAGTCAAATTCGGGTAGGTTTTCAA 59.991 40.000 0.00 0.00 0.00 2.69
1429 1435 9.347934 CAAGAAATCTACGACCATAGTCATATC 57.652 37.037 0.00 0.00 43.73 1.63
1608 1616 1.005215 CTCCCCTGCCATTCTTTGTCT 59.995 52.381 0.00 0.00 0.00 3.41
1672 1680 7.555087 TCCTTGTCAAACACAAATTTCTGAAT 58.445 30.769 0.01 0.00 44.71 2.57
1919 1939 8.212259 AGGTAGCCACTGATTTCATATAATCT 57.788 34.615 0.00 0.00 35.89 2.40
2065 2085 5.761165 TTCAGTTAAGTAAACAAGCCACC 57.239 39.130 0.00 0.00 40.83 4.61
2093 2114 8.939201 TGTCAAATAAGAGAATTTTGCAACAA 57.061 26.923 0.00 0.00 31.88 2.83
2588 2659 4.164221 TGAAGAAAGAGGTGAAGAAGGTGT 59.836 41.667 0.00 0.00 0.00 4.16
2763 2834 0.669625 ACTAGGGTTGTTCGCGCTTC 60.670 55.000 5.56 0.00 0.00 3.86
2765 2836 1.374252 CACTAGGGTTGTTCGCGCT 60.374 57.895 5.56 0.00 0.00 5.92
2766 2837 3.023591 GCACTAGGGTTGTTCGCGC 62.024 63.158 0.00 0.00 0.00 6.86
2767 2838 2.726691 CGCACTAGGGTTGTTCGCG 61.727 63.158 0.00 0.00 34.89 5.87
2768 2839 3.023591 GCGCACTAGGGTTGTTCGC 62.024 63.158 0.30 0.00 0.00 4.70
2769 2840 2.388232 GGCGCACTAGGGTTGTTCG 61.388 63.158 10.83 0.00 0.00 3.95
2770 2841 2.388232 CGGCGCACTAGGGTTGTTC 61.388 63.158 10.83 0.00 0.00 3.18
2771 2842 2.358247 CGGCGCACTAGGGTTGTT 60.358 61.111 10.83 0.00 0.00 2.83
2772 2843 3.296709 CTCGGCGCACTAGGGTTGT 62.297 63.158 10.83 0.00 0.00 3.32
2773 2844 2.509336 CTCGGCGCACTAGGGTTG 60.509 66.667 10.83 0.00 0.00 3.77



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.