Multiple sequence alignment - TraesCS6B01G320700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G320700 chr6B 100.000 3696 0 0 1 3696 567820119 567823814 0.000000e+00 6826.0
1 TraesCS6B01G320700 chr6B 93.541 449 24 5 1 445 567790346 567790793 0.000000e+00 664.0
2 TraesCS6B01G320700 chr6B 76.466 1228 218 49 995 2199 567844159 567845338 5.280000e-168 601.0
3 TraesCS6B01G320700 chr6B 88.053 452 42 9 1 446 612921550 612921995 3.270000e-145 525.0
4 TraesCS6B01G320700 chr6B 80.435 230 31 10 3477 3696 567852242 567852467 2.950000e-36 163.0
5 TraesCS6B01G320700 chr6D 93.862 3242 154 21 465 3696 380560405 380563611 0.000000e+00 4843.0
6 TraesCS6B01G320700 chr6A 91.191 1226 67 16 975 2199 521992260 521993445 0.000000e+00 1628.0
7 TraesCS6B01G320700 chr6A 89.390 688 36 13 1512 2199 521995211 521995861 0.000000e+00 832.0
8 TraesCS6B01G320700 chr6A 94.481 453 15 6 3253 3696 522036179 522036630 0.000000e+00 689.0
9 TraesCS6B01G320700 chr6A 94.076 422 20 2 2209 2626 522032798 522033218 1.450000e-178 636.0
10 TraesCS6B01G320700 chr6A 78.647 946 172 18 981 1918 522044422 522045345 5.280000e-168 601.0
11 TraesCS6B01G320700 chr6A 80.244 491 69 7 465 953 521990164 521990628 9.830000e-91 344.0
12 TraesCS6B01G320700 chr6A 95.385 195 9 0 3073 3267 522034599 522034793 9.970000e-81 311.0
13 TraesCS6B01G320700 chr6A 86.885 122 15 1 3477 3598 522058806 522058926 6.440000e-28 135.0
14 TraesCS6B01G320700 chr6A 97.368 76 2 0 3073 3148 522034317 522034392 3.000000e-26 130.0
15 TraesCS6B01G320700 chr4B 88.326 454 41 9 1 447 573614604 573614156 5.430000e-148 534.0
16 TraesCS6B01G320700 chr4B 87.500 456 42 10 1 447 573578549 573578100 2.550000e-141 512.0
17 TraesCS6B01G320700 chr2B 88.326 454 38 13 1 447 687648119 687648564 7.030000e-147 531.0
18 TraesCS6B01G320700 chr1B 87.939 456 40 11 1 448 424011203 424011651 1.180000e-144 523.0
19 TraesCS6B01G320700 chr1B 87.500 456 41 13 1 447 423998603 423999051 2.550000e-141 512.0
20 TraesCS6B01G320700 chr7B 87.445 454 44 12 1 447 430393849 430393402 9.160000e-141 510.0
21 TraesCS6B01G320700 chr7B 86.755 453 46 13 1 446 430314492 430314047 3.320000e-135 492.0
22 TraesCS6B01G320700 chr3B 87.500 56 4 2 1189 1244 69620664 69620716 1.110000e-05 62.1
23 TraesCS6B01G320700 chr4A 100.000 30 0 0 1202 1231 30306771 30306800 5.160000e-04 56.5
24 TraesCS6B01G320700 chr4A 100.000 28 0 0 1202 1229 31169634 31169607 7.000000e-03 52.8
25 TraesCS6B01G320700 chr4D 100.000 28 0 0 1202 1229 437285088 437285115 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G320700 chr6B 567820119 567823814 3695 False 6826.000000 6826 100.000000 1 3696 1 chr6B.!!$F2 3695
1 TraesCS6B01G320700 chr6B 567844159 567845338 1179 False 601.000000 601 76.466000 995 2199 1 chr6B.!!$F3 1204
2 TraesCS6B01G320700 chr6D 380560405 380563611 3206 False 4843.000000 4843 93.862000 465 3696 1 chr6D.!!$F1 3231
3 TraesCS6B01G320700 chr6A 521990164 521995861 5697 False 934.666667 1628 86.941667 465 2199 3 chr6A.!!$F3 1734
4 TraesCS6B01G320700 chr6A 522044422 522045345 923 False 601.000000 601 78.647000 981 1918 1 chr6A.!!$F1 937
5 TraesCS6B01G320700 chr6A 522032798 522036630 3832 False 441.500000 689 95.327500 2209 3696 4 chr6A.!!$F4 1487

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
198 199 0.036010 AGCAACATCCACCCGAAGAG 60.036 55.0 0.00 0.00 0.00 2.85 F
302 303 0.040058 TCGGCAGACTAGGGGTGTTA 59.960 55.0 0.00 0.00 0.00 2.41 F
624 625 0.105408 AGCCTACGTGACGGTTGTTT 59.895 50.0 10.66 0.00 0.00 2.83 F
2203 6255 0.319900 ACTGCACATCGAGGTGACAC 60.320 55.0 32.36 15.89 41.32 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1716 3344 1.056700 CGATCTCCCCCTCCACCATT 61.057 60.000 0.00 0.00 0.0 3.16 R
2178 6230 1.335182 ACCTCGATGTGCAGTATCTCG 59.665 52.381 8.71 3.86 0.0 4.04 R
2268 6324 1.485124 TGGATAGCGCAGGAGAAGAA 58.515 50.000 11.47 0.00 0.0 2.52 R
3540 10070 0.169672 GCGCAATGTCATCAAGCACT 59.830 50.000 0.30 0.00 0.0 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 4.722700 CCCGGGCCCACTGACTTG 62.723 72.222 24.92 1.64 0.00 3.16
49 50 3.953775 CCGGGCCCACTGACTTGT 61.954 66.667 24.92 0.00 0.00 3.16
50 51 2.589157 CCGGGCCCACTGACTTGTA 61.589 63.158 24.92 0.00 0.00 2.41
51 52 1.373435 CGGGCCCACTGACTTGTAA 59.627 57.895 24.92 0.00 0.00 2.41
52 53 0.953960 CGGGCCCACTGACTTGTAAC 60.954 60.000 24.92 0.00 0.00 2.50
53 54 0.109723 GGGCCCACTGACTTGTAACA 59.890 55.000 19.95 0.00 0.00 2.41
54 55 1.271926 GGGCCCACTGACTTGTAACAT 60.272 52.381 19.95 0.00 0.00 2.71
55 56 2.514803 GGCCCACTGACTTGTAACATT 58.485 47.619 0.00 0.00 0.00 2.71
56 57 3.560453 GGGCCCACTGACTTGTAACATTA 60.560 47.826 19.95 0.00 0.00 1.90
57 58 4.270008 GGCCCACTGACTTGTAACATTAT 58.730 43.478 0.00 0.00 0.00 1.28
58 59 4.335594 GGCCCACTGACTTGTAACATTATC 59.664 45.833 0.00 0.00 0.00 1.75
59 60 4.034048 GCCCACTGACTTGTAACATTATCG 59.966 45.833 0.00 0.00 0.00 2.92
60 61 5.175859 CCCACTGACTTGTAACATTATCGT 58.824 41.667 0.00 0.00 0.00 3.73
61 62 5.642063 CCCACTGACTTGTAACATTATCGTT 59.358 40.000 0.00 0.00 0.00 3.85
62 63 6.402118 CCCACTGACTTGTAACATTATCGTTG 60.402 42.308 0.00 0.00 0.00 4.10
63 64 6.147164 CCACTGACTTGTAACATTATCGTTGT 59.853 38.462 0.00 0.00 0.00 3.32
64 65 7.329962 CCACTGACTTGTAACATTATCGTTGTA 59.670 37.037 0.00 0.00 0.00 2.41
65 66 8.160342 CACTGACTTGTAACATTATCGTTGTAC 58.840 37.037 0.00 0.00 0.00 2.90
66 67 7.330208 ACTGACTTGTAACATTATCGTTGTACC 59.670 37.037 0.00 0.00 0.00 3.34
67 68 6.591062 TGACTTGTAACATTATCGTTGTACCC 59.409 38.462 0.00 0.00 0.00 3.69
68 69 6.704310 ACTTGTAACATTATCGTTGTACCCT 58.296 36.000 0.00 0.00 0.00 4.34
69 70 7.163441 ACTTGTAACATTATCGTTGTACCCTT 58.837 34.615 0.00 0.00 0.00 3.95
70 71 8.313292 ACTTGTAACATTATCGTTGTACCCTTA 58.687 33.333 0.00 0.00 0.00 2.69
71 72 8.706492 TTGTAACATTATCGTTGTACCCTTAG 57.294 34.615 0.00 0.00 0.00 2.18
72 73 7.267128 TGTAACATTATCGTTGTACCCTTAGG 58.733 38.462 0.00 0.00 40.04 2.69
90 91 6.486941 CCTTAGGGGTTTGGTCTATAAAACA 58.513 40.000 0.00 0.00 37.89 2.83
91 92 6.376299 CCTTAGGGGTTTGGTCTATAAAACAC 59.624 42.308 0.00 0.00 38.66 3.32
94 95 4.409187 GGGTTTGGTCTATAAAACACCCA 58.591 43.478 0.00 0.00 37.89 4.51
95 96 4.833938 GGGTTTGGTCTATAAAACACCCAA 59.166 41.667 0.00 0.00 37.89 4.12
96 97 5.047590 GGGTTTGGTCTATAAAACACCCAAG 60.048 44.000 0.00 0.00 37.89 3.61
97 98 5.047590 GGTTTGGTCTATAAAACACCCAAGG 60.048 44.000 0.00 0.00 37.89 3.61
98 99 5.586155 TTGGTCTATAAAACACCCAAGGA 57.414 39.130 0.00 0.00 0.00 3.36
99 100 5.174037 TGGTCTATAAAACACCCAAGGAG 57.826 43.478 0.00 0.00 0.00 3.69
100 101 3.945921 GGTCTATAAAACACCCAAGGAGC 59.054 47.826 0.00 0.00 0.00 4.70
101 102 3.945921 GTCTATAAAACACCCAAGGAGCC 59.054 47.826 0.00 0.00 0.00 4.70
102 103 2.231716 ATAAAACACCCAAGGAGCCC 57.768 50.000 0.00 0.00 0.00 5.19
103 104 0.854218 TAAAACACCCAAGGAGCCCA 59.146 50.000 0.00 0.00 0.00 5.36
104 105 0.759060 AAAACACCCAAGGAGCCCAC 60.759 55.000 0.00 0.00 0.00 4.61
105 106 2.976494 AAACACCCAAGGAGCCCACG 62.976 60.000 0.00 0.00 0.00 4.94
108 109 4.431131 CCCAAGGAGCCCACGCAT 62.431 66.667 0.00 0.00 37.52 4.73
109 110 2.589540 CCAAGGAGCCCACGCATA 59.410 61.111 0.00 0.00 37.52 3.14
110 111 1.819632 CCAAGGAGCCCACGCATAC 60.820 63.158 0.00 0.00 37.52 2.39
112 113 3.385749 AAGGAGCCCACGCATACGG 62.386 63.158 0.00 0.00 46.04 4.02
113 114 4.910585 GGAGCCCACGCATACGGG 62.911 72.222 0.00 0.00 46.04 5.28
117 118 2.748251 CCCACGCATACGGGCAAA 60.748 61.111 0.00 0.00 43.04 3.68
118 119 2.336478 CCCACGCATACGGGCAAAA 61.336 57.895 0.00 0.00 43.04 2.44
119 120 1.136565 CCACGCATACGGGCAAAAG 59.863 57.895 0.00 0.00 43.04 2.27
120 121 1.302383 CCACGCATACGGGCAAAAGA 61.302 55.000 0.00 0.00 43.04 2.52
121 122 0.519519 CACGCATACGGGCAAAAGAA 59.480 50.000 0.00 0.00 46.04 2.52
122 123 1.068885 CACGCATACGGGCAAAAGAAA 60.069 47.619 0.00 0.00 46.04 2.52
123 124 1.199097 ACGCATACGGGCAAAAGAAAG 59.801 47.619 0.00 0.00 46.04 2.62
124 125 1.629013 GCATACGGGCAAAAGAAAGC 58.371 50.000 0.00 0.00 0.00 3.51
125 126 1.067915 GCATACGGGCAAAAGAAAGCA 60.068 47.619 0.00 0.00 0.00 3.91
126 127 2.609244 GCATACGGGCAAAAGAAAGCAA 60.609 45.455 0.00 0.00 0.00 3.91
127 128 3.244976 CATACGGGCAAAAGAAAGCAAG 58.755 45.455 0.00 0.00 0.00 4.01
128 129 1.398692 ACGGGCAAAAGAAAGCAAGA 58.601 45.000 0.00 0.00 0.00 3.02
129 130 1.754226 ACGGGCAAAAGAAAGCAAGAA 59.246 42.857 0.00 0.00 0.00 2.52
130 131 2.223805 ACGGGCAAAAGAAAGCAAGAAG 60.224 45.455 0.00 0.00 0.00 2.85
131 132 2.759191 GGGCAAAAGAAAGCAAGAAGG 58.241 47.619 0.00 0.00 0.00 3.46
132 133 2.138320 GGCAAAAGAAAGCAAGAAGGC 58.862 47.619 0.00 0.00 0.00 4.35
133 134 2.483538 GGCAAAAGAAAGCAAGAAGGCA 60.484 45.455 0.00 0.00 35.83 4.75
134 135 2.798847 GCAAAAGAAAGCAAGAAGGCAG 59.201 45.455 0.00 0.00 35.83 4.85
135 136 3.491447 GCAAAAGAAAGCAAGAAGGCAGA 60.491 43.478 0.00 0.00 35.83 4.26
136 137 4.685924 CAAAAGAAAGCAAGAAGGCAGAA 58.314 39.130 0.00 0.00 35.83 3.02
137 138 4.581077 AAAGAAAGCAAGAAGGCAGAAG 57.419 40.909 0.00 0.00 35.83 2.85
138 139 3.220674 AGAAAGCAAGAAGGCAGAAGT 57.779 42.857 0.00 0.00 35.83 3.01
139 140 4.357918 AGAAAGCAAGAAGGCAGAAGTA 57.642 40.909 0.00 0.00 35.83 2.24
140 141 4.718961 AGAAAGCAAGAAGGCAGAAGTAA 58.281 39.130 0.00 0.00 35.83 2.24
141 142 4.759183 AGAAAGCAAGAAGGCAGAAGTAAG 59.241 41.667 0.00 0.00 35.83 2.34
142 143 2.431454 AGCAAGAAGGCAGAAGTAAGC 58.569 47.619 0.00 0.00 35.83 3.09
143 144 2.154462 GCAAGAAGGCAGAAGTAAGCA 58.846 47.619 0.00 0.00 0.00 3.91
144 145 2.161211 GCAAGAAGGCAGAAGTAAGCAG 59.839 50.000 0.00 0.00 0.00 4.24
145 146 2.106477 AGAAGGCAGAAGTAAGCAGC 57.894 50.000 0.00 0.00 0.00 5.25
146 147 1.349026 AGAAGGCAGAAGTAAGCAGCA 59.651 47.619 0.00 0.00 0.00 4.41
147 148 2.154462 GAAGGCAGAAGTAAGCAGCAA 58.846 47.619 0.00 0.00 0.00 3.91
148 149 1.528129 AGGCAGAAGTAAGCAGCAAC 58.472 50.000 0.00 0.00 0.00 4.17
149 150 1.202806 AGGCAGAAGTAAGCAGCAACA 60.203 47.619 0.00 0.00 0.00 3.33
150 151 1.198637 GGCAGAAGTAAGCAGCAACAG 59.801 52.381 0.00 0.00 0.00 3.16
151 152 2.146342 GCAGAAGTAAGCAGCAACAGA 58.854 47.619 0.00 0.00 0.00 3.41
152 153 2.096019 GCAGAAGTAAGCAGCAACAGAC 60.096 50.000 0.00 0.00 0.00 3.51
153 154 2.481952 CAGAAGTAAGCAGCAACAGACC 59.518 50.000 0.00 0.00 0.00 3.85
154 155 2.104792 AGAAGTAAGCAGCAACAGACCA 59.895 45.455 0.00 0.00 0.00 4.02
155 156 2.867109 AGTAAGCAGCAACAGACCAT 57.133 45.000 0.00 0.00 0.00 3.55
156 157 3.981071 AGTAAGCAGCAACAGACCATA 57.019 42.857 0.00 0.00 0.00 2.74
157 158 3.866651 AGTAAGCAGCAACAGACCATAG 58.133 45.455 0.00 0.00 0.00 2.23
158 159 3.515502 AGTAAGCAGCAACAGACCATAGA 59.484 43.478 0.00 0.00 0.00 1.98
159 160 2.687700 AGCAGCAACAGACCATAGAG 57.312 50.000 0.00 0.00 0.00 2.43
160 161 2.182827 AGCAGCAACAGACCATAGAGA 58.817 47.619 0.00 0.00 0.00 3.10
161 162 2.168106 AGCAGCAACAGACCATAGAGAG 59.832 50.000 0.00 0.00 0.00 3.20
162 163 2.548875 CAGCAACAGACCATAGAGAGC 58.451 52.381 0.00 0.00 0.00 4.09
163 164 2.093816 CAGCAACAGACCATAGAGAGCA 60.094 50.000 0.00 0.00 0.00 4.26
164 165 2.568956 AGCAACAGACCATAGAGAGCAA 59.431 45.455 0.00 0.00 0.00 3.91
165 166 2.675348 GCAACAGACCATAGAGAGCAAC 59.325 50.000 0.00 0.00 0.00 4.17
166 167 3.618507 GCAACAGACCATAGAGAGCAACT 60.619 47.826 0.00 0.00 0.00 3.16
167 168 4.382040 GCAACAGACCATAGAGAGCAACTA 60.382 45.833 0.00 0.00 0.00 2.24
168 169 5.347342 CAACAGACCATAGAGAGCAACTAG 58.653 45.833 0.00 0.00 0.00 2.57
169 170 3.383185 ACAGACCATAGAGAGCAACTAGC 59.617 47.826 0.00 0.00 46.19 3.42
179 180 2.624169 GCAACTAGCCACCGAAACA 58.376 52.632 0.00 0.00 37.23 2.83
180 181 0.517316 GCAACTAGCCACCGAAACAG 59.483 55.000 0.00 0.00 37.23 3.16
181 182 0.517316 CAACTAGCCACCGAAACAGC 59.483 55.000 0.00 0.00 0.00 4.40
182 183 0.107831 AACTAGCCACCGAAACAGCA 59.892 50.000 0.00 0.00 0.00 4.41
183 184 0.107831 ACTAGCCACCGAAACAGCAA 59.892 50.000 0.00 0.00 0.00 3.91
184 185 0.517316 CTAGCCACCGAAACAGCAAC 59.483 55.000 0.00 0.00 0.00 4.17
185 186 0.179043 TAGCCACCGAAACAGCAACA 60.179 50.000 0.00 0.00 0.00 3.33
186 187 0.823356 AGCCACCGAAACAGCAACAT 60.823 50.000 0.00 0.00 0.00 2.71
187 188 0.387239 GCCACCGAAACAGCAACATC 60.387 55.000 0.00 0.00 0.00 3.06
188 189 0.240945 CCACCGAAACAGCAACATCC 59.759 55.000 0.00 0.00 0.00 3.51
189 190 0.950836 CACCGAAACAGCAACATCCA 59.049 50.000 0.00 0.00 0.00 3.41
190 191 0.951558 ACCGAAACAGCAACATCCAC 59.048 50.000 0.00 0.00 0.00 4.02
191 192 0.240945 CCGAAACAGCAACATCCACC 59.759 55.000 0.00 0.00 0.00 4.61
192 193 0.240945 CGAAACAGCAACATCCACCC 59.759 55.000 0.00 0.00 0.00 4.61
193 194 0.240945 GAAACAGCAACATCCACCCG 59.759 55.000 0.00 0.00 0.00 5.28
194 195 0.179004 AAACAGCAACATCCACCCGA 60.179 50.000 0.00 0.00 0.00 5.14
195 196 0.179004 AACAGCAACATCCACCCGAA 60.179 50.000 0.00 0.00 0.00 4.30
196 197 0.606401 ACAGCAACATCCACCCGAAG 60.606 55.000 0.00 0.00 0.00 3.79
197 198 0.321564 CAGCAACATCCACCCGAAGA 60.322 55.000 0.00 0.00 0.00 2.87
198 199 0.036010 AGCAACATCCACCCGAAGAG 60.036 55.000 0.00 0.00 0.00 2.85
199 200 1.026718 GCAACATCCACCCGAAGAGG 61.027 60.000 0.00 0.00 40.63 3.69
200 201 0.613260 CAACATCCACCCGAAGAGGA 59.387 55.000 0.00 0.00 45.00 3.71
201 202 0.905357 AACATCCACCCGAAGAGGAG 59.095 55.000 0.00 0.00 45.00 3.69
202 203 1.144936 CATCCACCCGAAGAGGAGC 59.855 63.158 0.00 0.00 45.00 4.70
203 204 1.306141 ATCCACCCGAAGAGGAGCA 60.306 57.895 0.00 0.00 45.00 4.26
204 205 1.333636 ATCCACCCGAAGAGGAGCAG 61.334 60.000 0.00 0.00 45.00 4.24
205 206 2.125350 CACCCGAAGAGGAGCAGC 60.125 66.667 0.00 0.00 45.00 5.25
206 207 3.394836 ACCCGAAGAGGAGCAGCC 61.395 66.667 0.00 0.00 45.00 4.85
215 216 4.232310 GGAGCAGCCTAAGCCTTG 57.768 61.111 0.00 0.00 41.25 3.61
216 217 1.452833 GGAGCAGCCTAAGCCTTGG 60.453 63.158 0.00 0.00 41.25 3.61
221 222 3.143515 GCCTAAGCCTTGGCCAGC 61.144 66.667 5.11 7.31 43.11 4.85
222 223 2.679716 CCTAAGCCTTGGCCAGCT 59.320 61.111 13.53 13.53 42.40 4.24
224 225 1.034292 CCTAAGCCTTGGCCAGCTTC 61.034 60.000 29.60 11.14 46.11 3.86
225 226 1.000896 TAAGCCTTGGCCAGCTTCC 60.001 57.895 29.60 8.83 46.11 3.46
226 227 2.499303 TAAGCCTTGGCCAGCTTCCC 62.499 60.000 29.60 7.50 46.11 3.97
227 228 4.372999 GCCTTGGCCAGCTTCCCT 62.373 66.667 5.11 0.00 0.00 4.20
228 229 2.442413 CCTTGGCCAGCTTCCCTT 59.558 61.111 5.11 0.00 0.00 3.95
229 230 1.680314 CCTTGGCCAGCTTCCCTTC 60.680 63.158 5.11 0.00 0.00 3.46
230 231 1.680314 CTTGGCCAGCTTCCCTTCC 60.680 63.158 5.11 0.00 0.00 3.46
231 232 2.147433 CTTGGCCAGCTTCCCTTCCT 62.147 60.000 5.11 0.00 0.00 3.36
232 233 2.142292 TTGGCCAGCTTCCCTTCCTC 62.142 60.000 5.11 0.00 0.00 3.71
233 234 2.273776 GCCAGCTTCCCTTCCTCC 59.726 66.667 0.00 0.00 0.00 4.30
234 235 2.304831 GCCAGCTTCCCTTCCTCCT 61.305 63.158 0.00 0.00 0.00 3.69
235 236 1.911471 CCAGCTTCCCTTCCTCCTC 59.089 63.158 0.00 0.00 0.00 3.71
236 237 1.631071 CCAGCTTCCCTTCCTCCTCC 61.631 65.000 0.00 0.00 0.00 4.30
237 238 0.911525 CAGCTTCCCTTCCTCCTCCA 60.912 60.000 0.00 0.00 0.00 3.86
238 239 0.045469 AGCTTCCCTTCCTCCTCCAT 59.955 55.000 0.00 0.00 0.00 3.41
239 240 1.295292 AGCTTCCCTTCCTCCTCCATA 59.705 52.381 0.00 0.00 0.00 2.74
240 241 1.418264 GCTTCCCTTCCTCCTCCATAC 59.582 57.143 0.00 0.00 0.00 2.39
241 242 2.764269 CTTCCCTTCCTCCTCCATACA 58.236 52.381 0.00 0.00 0.00 2.29
242 243 2.478872 TCCCTTCCTCCTCCATACAG 57.521 55.000 0.00 0.00 0.00 2.74
243 244 0.761802 CCCTTCCTCCTCCATACAGC 59.238 60.000 0.00 0.00 0.00 4.40
244 245 1.694048 CCCTTCCTCCTCCATACAGCT 60.694 57.143 0.00 0.00 0.00 4.24
245 246 1.691434 CCTTCCTCCTCCATACAGCTC 59.309 57.143 0.00 0.00 0.00 4.09
246 247 2.676748 CTTCCTCCTCCATACAGCTCT 58.323 52.381 0.00 0.00 0.00 4.09
247 248 3.437198 CCTTCCTCCTCCATACAGCTCTA 60.437 52.174 0.00 0.00 0.00 2.43
248 249 3.517296 TCCTCCTCCATACAGCTCTAG 57.483 52.381 0.00 0.00 0.00 2.43
249 250 2.109128 TCCTCCTCCATACAGCTCTAGG 59.891 54.545 0.00 0.00 0.00 3.02
250 251 2.109128 CCTCCTCCATACAGCTCTAGGA 59.891 54.545 0.00 0.00 0.00 2.94
251 252 3.420893 CTCCTCCATACAGCTCTAGGAG 58.579 54.545 12.05 12.05 42.93 3.69
252 253 2.786445 TCCTCCATACAGCTCTAGGAGT 59.214 50.000 15.86 0.00 43.37 3.85
253 254 3.981375 TCCTCCATACAGCTCTAGGAGTA 59.019 47.826 15.86 1.92 43.37 2.59
254 255 4.415846 TCCTCCATACAGCTCTAGGAGTAA 59.584 45.833 15.86 5.34 43.37 2.24
255 256 4.521256 CCTCCATACAGCTCTAGGAGTAAC 59.479 50.000 15.86 0.00 43.37 2.50
256 257 5.125367 TCCATACAGCTCTAGGAGTAACA 57.875 43.478 0.00 0.00 31.39 2.41
257 258 5.706447 TCCATACAGCTCTAGGAGTAACAT 58.294 41.667 0.00 0.00 31.39 2.71
258 259 6.136857 TCCATACAGCTCTAGGAGTAACATT 58.863 40.000 0.00 0.00 31.39 2.71
259 260 6.040955 TCCATACAGCTCTAGGAGTAACATTG 59.959 42.308 0.00 0.00 31.39 2.82
260 261 6.183360 CCATACAGCTCTAGGAGTAACATTGT 60.183 42.308 0.00 0.00 31.39 2.71
261 262 7.014326 CCATACAGCTCTAGGAGTAACATTGTA 59.986 40.741 0.00 0.00 31.39 2.41
262 263 6.210287 ACAGCTCTAGGAGTAACATTGTAC 57.790 41.667 0.00 0.00 31.39 2.90
263 264 5.952947 ACAGCTCTAGGAGTAACATTGTACT 59.047 40.000 0.00 0.00 37.02 2.73
264 265 7.117397 ACAGCTCTAGGAGTAACATTGTACTA 58.883 38.462 0.00 0.00 34.40 1.82
265 266 7.780745 ACAGCTCTAGGAGTAACATTGTACTAT 59.219 37.037 0.00 0.00 34.40 2.12
266 267 8.293867 CAGCTCTAGGAGTAACATTGTACTATC 58.706 40.741 0.00 0.00 34.40 2.08
267 268 7.173562 AGCTCTAGGAGTAACATTGTACTATCG 59.826 40.741 0.00 0.00 34.40 2.92
268 269 7.172875 GCTCTAGGAGTAACATTGTACTATCGA 59.827 40.741 0.00 0.00 34.40 3.59
269 270 8.969260 TCTAGGAGTAACATTGTACTATCGAA 57.031 34.615 0.00 0.00 34.40 3.71
270 271 8.834465 TCTAGGAGTAACATTGTACTATCGAAC 58.166 37.037 0.00 0.00 34.40 3.95
271 272 7.400599 AGGAGTAACATTGTACTATCGAACA 57.599 36.000 0.00 0.00 34.40 3.18
272 273 8.008513 AGGAGTAACATTGTACTATCGAACAT 57.991 34.615 0.00 0.00 34.40 2.71
273 274 8.136165 AGGAGTAACATTGTACTATCGAACATC 58.864 37.037 0.00 0.00 34.40 3.06
274 275 7.919091 GGAGTAACATTGTACTATCGAACATCA 59.081 37.037 0.00 0.00 34.40 3.07
275 276 9.297586 GAGTAACATTGTACTATCGAACATCAA 57.702 33.333 0.00 0.00 34.40 2.57
276 277 9.647797 AGTAACATTGTACTATCGAACATCAAA 57.352 29.630 0.00 0.00 32.42 2.69
277 278 9.685005 GTAACATTGTACTATCGAACATCAAAC 57.315 33.333 0.00 0.00 0.00 2.93
278 279 8.547967 AACATTGTACTATCGAACATCAAACT 57.452 30.769 0.00 0.00 0.00 2.66
279 280 9.647797 AACATTGTACTATCGAACATCAAACTA 57.352 29.630 0.00 0.00 0.00 2.24
280 281 9.084164 ACATTGTACTATCGAACATCAAACTAC 57.916 33.333 0.00 0.00 0.00 2.73
281 282 9.083080 CATTGTACTATCGAACATCAAACTACA 57.917 33.333 0.00 0.00 0.00 2.74
282 283 8.456904 TTGTACTATCGAACATCAAACTACAC 57.543 34.615 0.00 0.00 0.00 2.90
283 284 7.823665 TGTACTATCGAACATCAAACTACACT 58.176 34.615 0.00 0.00 0.00 3.55
284 285 7.966753 TGTACTATCGAACATCAAACTACACTC 59.033 37.037 0.00 0.00 0.00 3.51
285 286 6.028368 ACTATCGAACATCAAACTACACTCG 58.972 40.000 0.00 0.00 0.00 4.18
286 287 3.571571 TCGAACATCAAACTACACTCGG 58.428 45.455 0.00 0.00 0.00 4.63
287 288 2.092211 CGAACATCAAACTACACTCGGC 59.908 50.000 0.00 0.00 0.00 5.54
288 289 2.831685 ACATCAAACTACACTCGGCA 57.168 45.000 0.00 0.00 0.00 5.69
289 290 2.688507 ACATCAAACTACACTCGGCAG 58.311 47.619 0.00 0.00 0.00 4.85
290 291 2.299013 ACATCAAACTACACTCGGCAGA 59.701 45.455 0.00 0.00 0.00 4.26
291 292 2.433868 TCAAACTACACTCGGCAGAC 57.566 50.000 0.00 0.00 0.00 3.51
292 293 1.961394 TCAAACTACACTCGGCAGACT 59.039 47.619 0.00 0.00 0.00 3.24
293 294 3.151554 TCAAACTACACTCGGCAGACTA 58.848 45.455 0.00 0.00 0.00 2.59
294 295 3.190744 TCAAACTACACTCGGCAGACTAG 59.809 47.826 0.00 0.00 0.00 2.57
295 296 1.752683 ACTACACTCGGCAGACTAGG 58.247 55.000 0.00 0.00 0.00 3.02
296 297 1.025812 CTACACTCGGCAGACTAGGG 58.974 60.000 0.00 0.00 0.00 3.53
297 298 0.395311 TACACTCGGCAGACTAGGGG 60.395 60.000 0.00 0.00 0.00 4.79
298 299 1.682684 CACTCGGCAGACTAGGGGT 60.683 63.158 0.00 0.00 0.00 4.95
299 300 1.682684 ACTCGGCAGACTAGGGGTG 60.683 63.158 0.00 0.00 0.00 4.61
300 301 1.682684 CTCGGCAGACTAGGGGTGT 60.683 63.158 0.00 0.00 0.00 4.16
301 302 1.229082 TCGGCAGACTAGGGGTGTT 60.229 57.895 0.00 0.00 0.00 3.32
302 303 0.040058 TCGGCAGACTAGGGGTGTTA 59.960 55.000 0.00 0.00 0.00 2.41
303 304 1.120530 CGGCAGACTAGGGGTGTTAT 58.879 55.000 0.00 0.00 0.00 1.89
304 305 1.068741 CGGCAGACTAGGGGTGTTATC 59.931 57.143 0.00 0.00 0.00 1.75
305 306 2.399580 GGCAGACTAGGGGTGTTATCT 58.600 52.381 0.00 0.00 0.00 1.98
306 307 2.365941 GGCAGACTAGGGGTGTTATCTC 59.634 54.545 0.00 0.00 0.00 2.75
307 308 3.301274 GCAGACTAGGGGTGTTATCTCT 58.699 50.000 0.00 0.00 0.00 3.10
308 309 3.319689 GCAGACTAGGGGTGTTATCTCTC 59.680 52.174 0.00 0.00 0.00 3.20
309 310 3.892588 CAGACTAGGGGTGTTATCTCTCC 59.107 52.174 0.00 0.00 0.00 3.71
310 311 2.885894 GACTAGGGGTGTTATCTCTCCG 59.114 54.545 0.00 0.00 33.36 4.63
311 312 2.240279 CTAGGGGTGTTATCTCTCCGG 58.760 57.143 0.00 0.00 33.36 5.14
312 313 0.635009 AGGGGTGTTATCTCTCCGGA 59.365 55.000 2.93 2.93 33.36 5.14
313 314 1.041437 GGGGTGTTATCTCTCCGGAG 58.959 60.000 26.32 26.32 40.73 4.63
326 327 2.492090 CGGAGAGCTCGGAACCTG 59.508 66.667 8.37 4.43 32.43 4.00
327 328 2.344203 CGGAGAGCTCGGAACCTGT 61.344 63.158 8.37 0.00 32.43 4.00
328 329 1.216710 GGAGAGCTCGGAACCTGTG 59.783 63.158 8.37 0.00 0.00 3.66
329 330 1.536943 GGAGAGCTCGGAACCTGTGT 61.537 60.000 8.37 0.00 0.00 3.72
330 331 1.174783 GAGAGCTCGGAACCTGTGTA 58.825 55.000 8.37 0.00 0.00 2.90
331 332 1.751924 GAGAGCTCGGAACCTGTGTAT 59.248 52.381 8.37 0.00 0.00 2.29
332 333 1.478510 AGAGCTCGGAACCTGTGTATG 59.521 52.381 8.37 0.00 0.00 2.39
333 334 1.204941 GAGCTCGGAACCTGTGTATGT 59.795 52.381 0.00 0.00 0.00 2.29
334 335 1.204941 AGCTCGGAACCTGTGTATGTC 59.795 52.381 0.00 0.00 0.00 3.06
335 336 1.739371 GCTCGGAACCTGTGTATGTCC 60.739 57.143 0.00 0.00 0.00 4.02
336 337 0.528924 TCGGAACCTGTGTATGTCCG 59.471 55.000 4.06 4.06 40.22 4.79
337 338 0.459585 CGGAACCTGTGTATGTCCGG 60.460 60.000 0.00 0.00 35.86 5.14
338 339 0.743345 GGAACCTGTGTATGTCCGGC 60.743 60.000 0.00 0.00 0.00 6.13
339 340 1.079405 AACCTGTGTATGTCCGGCG 60.079 57.895 0.00 0.00 0.00 6.46
340 341 1.823169 AACCTGTGTATGTCCGGCGT 61.823 55.000 6.01 0.00 0.00 5.68
341 342 0.966875 ACCTGTGTATGTCCGGCGTA 60.967 55.000 6.01 0.00 0.00 4.42
342 343 0.526954 CCTGTGTATGTCCGGCGTAC 60.527 60.000 16.64 16.64 39.43 3.67
343 344 0.526954 CTGTGTATGTCCGGCGTACC 60.527 60.000 19.17 13.44 38.49 3.34
356 357 4.274700 GTACCGCGCCCGCTCATA 62.275 66.667 11.12 0.00 39.32 2.15
357 358 4.274700 TACCGCGCCCGCTCATAC 62.275 66.667 11.12 0.00 39.32 2.39
361 362 3.573491 GCGCCCGCTCATACCAAC 61.573 66.667 5.27 0.00 38.26 3.77
362 363 2.895372 CGCCCGCTCATACCAACC 60.895 66.667 0.00 0.00 0.00 3.77
363 364 2.590092 GCCCGCTCATACCAACCT 59.410 61.111 0.00 0.00 0.00 3.50
364 365 1.523938 GCCCGCTCATACCAACCTC 60.524 63.158 0.00 0.00 0.00 3.85
365 366 1.227263 CCCGCTCATACCAACCTCG 60.227 63.158 0.00 0.00 0.00 4.63
366 367 1.883084 CCGCTCATACCAACCTCGC 60.883 63.158 0.00 0.00 0.00 5.03
367 368 1.883084 CGCTCATACCAACCTCGCC 60.883 63.158 0.00 0.00 0.00 5.54
368 369 1.522569 GCTCATACCAACCTCGCCT 59.477 57.895 0.00 0.00 0.00 5.52
369 370 0.530870 GCTCATACCAACCTCGCCTC 60.531 60.000 0.00 0.00 0.00 4.70
370 371 1.115467 CTCATACCAACCTCGCCTCT 58.885 55.000 0.00 0.00 0.00 3.69
371 372 0.824109 TCATACCAACCTCGCCTCTG 59.176 55.000 0.00 0.00 0.00 3.35
372 373 0.179073 CATACCAACCTCGCCTCTGG 60.179 60.000 0.00 0.00 34.95 3.86
373 374 0.325296 ATACCAACCTCGCCTCTGGA 60.325 55.000 0.00 0.00 32.97 3.86
374 375 0.970937 TACCAACCTCGCCTCTGGAG 60.971 60.000 0.00 0.00 32.97 3.86
375 376 2.125350 CAACCTCGCCTCTGGAGC 60.125 66.667 0.00 0.00 0.00 4.70
376 377 3.394836 AACCTCGCCTCTGGAGCC 61.395 66.667 0.00 0.00 0.00 4.70
379 380 3.160047 CTCGCCTCTGGAGCCCAT 61.160 66.667 0.00 0.00 30.82 4.00
380 381 3.157252 TCGCCTCTGGAGCCCATC 61.157 66.667 0.00 0.00 30.82 3.51
381 382 3.473647 CGCCTCTGGAGCCCATCA 61.474 66.667 0.00 0.00 30.82 3.07
382 383 2.509916 GCCTCTGGAGCCCATCAG 59.490 66.667 0.00 0.00 30.82 2.90
383 384 2.509916 CCTCTGGAGCCCATCAGC 59.490 66.667 0.00 0.00 30.82 4.26
384 385 2.108566 CTCTGGAGCCCATCAGCG 59.891 66.667 0.00 0.00 38.01 5.18
385 386 4.166888 TCTGGAGCCCATCAGCGC 62.167 66.667 0.00 0.00 38.01 5.92
389 390 4.925861 GAGCCCATCAGCGCCCTC 62.926 72.222 2.29 0.00 38.01 4.30
392 393 4.598894 CCCATCAGCGCCCTCGAG 62.599 72.222 2.29 5.13 38.10 4.04
401 402 4.851214 GCCCTCGAGCCTCCTCCT 62.851 72.222 6.99 0.00 34.49 3.69
402 403 2.520741 CCCTCGAGCCTCCTCCTC 60.521 72.222 6.99 0.00 34.49 3.71
403 404 2.600731 CCTCGAGCCTCCTCCTCT 59.399 66.667 6.99 0.00 34.49 3.69
404 405 1.528309 CCTCGAGCCTCCTCCTCTC 60.528 68.421 6.99 0.00 34.49 3.20
405 406 1.531748 CTCGAGCCTCCTCCTCTCT 59.468 63.158 0.00 0.00 34.49 3.10
406 407 0.106719 CTCGAGCCTCCTCCTCTCTT 60.107 60.000 0.00 0.00 34.49 2.85
407 408 0.333312 TCGAGCCTCCTCCTCTCTTT 59.667 55.000 0.00 0.00 34.49 2.52
408 409 1.564818 TCGAGCCTCCTCCTCTCTTTA 59.435 52.381 0.00 0.00 34.49 1.85
409 410 1.953686 CGAGCCTCCTCCTCTCTTTAG 59.046 57.143 0.00 0.00 34.49 1.85
410 411 1.686587 GAGCCTCCTCCTCTCTTTAGC 59.313 57.143 0.00 0.00 31.68 3.09
411 412 0.756294 GCCTCCTCCTCTCTTTAGCC 59.244 60.000 0.00 0.00 0.00 3.93
412 413 1.967274 GCCTCCTCCTCTCTTTAGCCA 60.967 57.143 0.00 0.00 0.00 4.75
413 414 2.688477 CCTCCTCCTCTCTTTAGCCAT 58.312 52.381 0.00 0.00 0.00 4.40
414 415 2.632512 CCTCCTCCTCTCTTTAGCCATC 59.367 54.545 0.00 0.00 0.00 3.51
415 416 2.632512 CTCCTCCTCTCTTTAGCCATCC 59.367 54.545 0.00 0.00 0.00 3.51
416 417 1.696884 CCTCCTCTCTTTAGCCATCCC 59.303 57.143 0.00 0.00 0.00 3.85
417 418 2.402564 CTCCTCTCTTTAGCCATCCCA 58.597 52.381 0.00 0.00 0.00 4.37
418 419 2.978278 CTCCTCTCTTTAGCCATCCCAT 59.022 50.000 0.00 0.00 0.00 4.00
419 420 2.707791 TCCTCTCTTTAGCCATCCCATG 59.292 50.000 0.00 0.00 0.00 3.66
427 428 3.773370 CCATCCCATGGCATCTGC 58.227 61.111 6.09 0.00 44.70 4.26
484 485 3.873679 CTGCAAGGCCTGGGCTTCA 62.874 63.158 30.36 26.11 45.21 3.02
485 486 2.601367 GCAAGGCCTGGGCTTCAA 60.601 61.111 30.36 0.00 45.21 2.69
552 553 1.741327 GCAAGGGCGAATGGATGCAT 61.741 55.000 0.00 0.00 34.10 3.96
561 562 3.243636 GCGAATGGATGCATGGAGAAAAT 60.244 43.478 2.46 0.00 0.00 1.82
562 563 4.738541 GCGAATGGATGCATGGAGAAAATT 60.739 41.667 2.46 0.00 0.00 1.82
570 571 3.053395 TGCATGGAGAAAATTAGGGCTCT 60.053 43.478 0.00 0.00 0.00 4.09
572 573 3.652057 TGGAGAAAATTAGGGCTCTGG 57.348 47.619 0.00 0.00 0.00 3.86
578 579 1.152649 AATTAGGGCTCTGGATGGGG 58.847 55.000 0.00 0.00 0.00 4.96
589 590 1.344114 CTGGATGGGGTTTTTGTGTGG 59.656 52.381 0.00 0.00 0.00 4.17
592 593 1.000717 GATGGGGTTTTTGTGTGGACG 60.001 52.381 0.00 0.00 0.00 4.79
594 595 0.752376 GGGGTTTTTGTGTGGACGGA 60.752 55.000 0.00 0.00 0.00 4.69
599 600 2.621526 GTTTTTGTGTGGACGGAGGATT 59.378 45.455 0.00 0.00 0.00 3.01
601 602 2.649531 TTGTGTGGACGGAGGATTTT 57.350 45.000 0.00 0.00 0.00 1.82
615 616 2.706890 GGATTTTGGAAGCCTACGTGA 58.293 47.619 0.00 0.00 38.31 4.35
619 620 1.466025 TTGGAAGCCTACGTGACGGT 61.466 55.000 10.66 0.00 0.00 4.83
624 625 0.105408 AGCCTACGTGACGGTTGTTT 59.895 50.000 10.66 0.00 0.00 2.83
627 628 0.863144 CTACGTGACGGTTGTTTGGG 59.137 55.000 10.66 0.00 0.00 4.12
632 633 1.890510 GACGGTTGTTTGGGCGTCT 60.891 57.895 0.00 0.00 0.00 4.18
633 634 2.113131 GACGGTTGTTTGGGCGTCTG 62.113 60.000 0.00 0.00 0.00 3.51
639 640 1.299850 GTTTGGGCGTCTGCAAACC 60.300 57.895 9.83 0.00 45.35 3.27
641 642 1.452145 TTTGGGCGTCTGCAAACCTC 61.452 55.000 0.00 0.00 45.35 3.85
642 643 3.056328 GGGCGTCTGCAAACCTCC 61.056 66.667 0.00 0.00 45.35 4.30
648 649 2.677875 CTGCAAACCTCCCCCAGC 60.678 66.667 0.00 0.00 0.00 4.85
663 664 0.829182 CCAGCTTGGCCTCCAGTTTT 60.829 55.000 3.32 0.00 33.81 2.43
677 678 4.456535 TCCAGTTTTCGAGAATTTGGACA 58.543 39.130 16.14 2.00 0.00 4.02
681 682 3.469899 TTTCGAGAATTTGGACATGCG 57.530 42.857 0.00 0.00 0.00 4.73
684 685 1.942657 CGAGAATTTGGACATGCGGAT 59.057 47.619 0.00 0.00 0.00 4.18
689 690 2.036958 TTTGGACATGCGGATCGATT 57.963 45.000 0.00 0.00 0.00 3.34
695 696 2.351418 GACATGCGGATCGATTGTGAAA 59.649 45.455 4.46 0.00 0.00 2.69
696 697 2.945008 ACATGCGGATCGATTGTGAAAT 59.055 40.909 0.00 0.00 0.00 2.17
700 701 5.553290 TGCGGATCGATTGTGAAATTTTA 57.447 34.783 0.00 0.00 0.00 1.52
719 722 1.167851 AATGCACCGTGTTGGATCAG 58.832 50.000 0.00 0.00 42.00 2.90
723 726 1.877637 CACCGTGTTGGATCAGAACA 58.122 50.000 5.63 5.63 42.00 3.18
732 735 3.694043 TGGATCAGAACATGTCCGAAA 57.306 42.857 0.00 0.00 33.96 3.46
734 737 3.244387 TGGATCAGAACATGTCCGAAACA 60.244 43.478 0.00 0.00 43.51 2.83
747 750 5.113383 TGTCCGAAACATGATATTTAGCGT 58.887 37.500 0.00 0.00 31.20 5.07
753 756 7.643764 CCGAAACATGATATTTAGCGTCATTTT 59.356 33.333 0.00 0.00 30.57 1.82
754 757 9.009327 CGAAACATGATATTTAGCGTCATTTTT 57.991 29.630 0.00 0.00 35.89 1.94
777 780 2.510238 GCGGCGCTGAAGATGTCT 60.510 61.111 26.86 0.00 0.00 3.41
783 786 2.349886 GGCGCTGAAGATGTCTTTAGTG 59.650 50.000 18.37 18.37 46.44 2.74
784 787 3.648179 CGCTGAAGATGTCTTTAGTGC 57.352 47.619 13.00 7.33 41.12 4.40
881 884 2.636830 CAAGAACATTCCGCTCCATCT 58.363 47.619 0.00 0.00 0.00 2.90
962 965 3.320541 CCATATCTCACTTTCTCCTCGCT 59.679 47.826 0.00 0.00 0.00 4.93
1067 2681 2.362760 TGCCCAAGCCATCGCAAT 60.363 55.556 0.00 0.00 38.69 3.56
1716 3344 1.367471 CGTGCTCCTCTGGTTGTCA 59.633 57.895 0.00 0.00 0.00 3.58
1732 3360 0.914417 GTCAATGGTGGAGGGGGAGA 60.914 60.000 0.00 0.00 0.00 3.71
1946 3574 1.537776 CCATCACTCGACTCATGGAGC 60.538 57.143 6.04 0.00 38.52 4.70
1971 3599 7.011389 GCTGCCAACGATGCATAATTATATCTA 59.989 37.037 0.00 0.00 38.22 1.98
2178 6230 0.534203 TCAGGTGCTTTCCCAACGTC 60.534 55.000 0.00 0.00 0.00 4.34
2202 6254 1.253100 TACTGCACATCGAGGTGACA 58.747 50.000 32.36 25.36 41.32 3.58
2203 6255 0.319900 ACTGCACATCGAGGTGACAC 60.320 55.000 32.36 15.89 41.32 3.67
2204 6256 1.005037 TGCACATCGAGGTGACACC 60.005 57.895 32.36 17.43 41.32 4.16
2205 6257 1.741770 GCACATCGAGGTGACACCC 60.742 63.158 32.36 11.46 39.75 4.61
2206 6258 1.671166 CACATCGAGGTGACACCCA 59.329 57.895 25.10 5.99 39.75 4.51
2207 6259 0.390340 CACATCGAGGTGACACCCAG 60.390 60.000 25.10 15.01 39.75 4.45
2214 6266 2.032681 GTGACACCCAGACCCAGC 59.967 66.667 0.00 0.00 0.00 4.85
2222 6274 4.239495 ACACCCAGACCCAGCATATATTA 58.761 43.478 0.00 0.00 0.00 0.98
2223 6275 4.663120 ACACCCAGACCCAGCATATATTAA 59.337 41.667 0.00 0.00 0.00 1.40
2268 6324 1.109323 GCAACAGAAGGCCAGTTGGT 61.109 55.000 23.01 8.40 42.07 3.67
2279 6335 1.528129 CCAGTTGGTTCTTCTCCTGC 58.472 55.000 0.00 0.00 0.00 4.85
2281 6337 0.603975 AGTTGGTTCTTCTCCTGCGC 60.604 55.000 0.00 0.00 0.00 6.09
2440 6497 4.873129 TTCCGCGGCGATCAGAGC 62.873 66.667 25.92 0.00 0.00 4.09
2603 6660 0.322187 GGCCGGTAAGGATGTTGTGT 60.322 55.000 1.90 0.00 45.00 3.72
2643 6833 0.322456 CCAAAGGATGGCGTCTGGAA 60.322 55.000 6.67 0.00 43.80 3.53
2680 6870 1.694639 CGTCTGACCTTACCGTTGAC 58.305 55.000 1.55 0.00 0.00 3.18
2683 6873 1.267806 TCTGACCTTACCGTTGACGAC 59.732 52.381 4.91 0.00 43.02 4.34
2698 6888 0.802494 ACGACCCGTTTCATTGATGC 59.198 50.000 0.00 0.00 36.35 3.91
2706 7050 2.743664 CGTTTCATTGATGCACCTGAGA 59.256 45.455 0.00 0.00 0.00 3.27
2710 7054 2.686405 TCATTGATGCACCTGAGATTGC 59.314 45.455 0.00 0.00 39.33 3.56
2717 7061 5.484998 TGATGCACCTGAGATTGCCTATATA 59.515 40.000 0.00 0.00 38.00 0.86
2727 7849 9.848710 CTGAGATTGCCTATATATTTCCATGAT 57.151 33.333 0.00 0.00 0.00 2.45
2729 7851 9.282569 GAGATTGCCTATATATTTCCATGATCC 57.717 37.037 0.00 0.00 0.00 3.36
2774 7896 1.270571 TGTTCGACATGCAAGGCACTA 60.271 47.619 0.00 0.00 43.04 2.74
2800 7922 9.632638 ATTGAGTATTTAGGCATCTATGTTTGT 57.367 29.630 0.00 0.00 0.00 2.83
2826 7948 3.071874 ACCAAGGCATGAATCTTTCGA 57.928 42.857 0.00 0.00 0.00 3.71
2892 8014 6.176183 AGTCCTATGGTTCACTCAAAAGATG 58.824 40.000 0.00 0.00 0.00 2.90
3334 9856 6.942532 TGATTGGATAGTTTAGCCATCAAC 57.057 37.500 0.00 0.00 44.81 3.18
3337 9859 5.957771 TGGATAGTTTAGCCATCAACTCT 57.042 39.130 0.00 0.00 39.74 3.24
3356 9884 3.806380 TCTTTGCCATGCATTTGTGTTT 58.194 36.364 0.00 0.00 38.76 2.83
3357 9885 4.197750 TCTTTGCCATGCATTTGTGTTTT 58.802 34.783 0.00 0.00 38.76 2.43
3475 10003 9.624373 AAATCTCACAGAAAGCACATATATCTT 57.376 29.630 0.00 0.00 0.00 2.40
3540 10070 9.952030 TGTTAGTATCAATCAGAAACCATGTAA 57.048 29.630 0.00 0.00 0.00 2.41
3547 10077 5.633830 ATCAGAAACCATGTAAGTGCTTG 57.366 39.130 0.00 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.722700 CAAGTCAGTGGGCCCGGG 62.723 72.222 19.09 19.09 0.00 5.73
32 33 2.119484 TTACAAGTCAGTGGGCCCGG 62.119 60.000 19.37 9.68 0.00 5.73
33 34 0.953960 GTTACAAGTCAGTGGGCCCG 60.954 60.000 19.37 2.31 0.00 6.13
34 35 0.109723 TGTTACAAGTCAGTGGGCCC 59.890 55.000 17.59 17.59 0.00 5.80
35 36 2.200373 ATGTTACAAGTCAGTGGGCC 57.800 50.000 0.00 0.00 0.00 5.80
36 37 4.034048 CGATAATGTTACAAGTCAGTGGGC 59.966 45.833 0.00 0.00 0.00 5.36
37 38 5.175859 ACGATAATGTTACAAGTCAGTGGG 58.824 41.667 0.00 0.00 0.00 4.61
38 39 6.147164 ACAACGATAATGTTACAAGTCAGTGG 59.853 38.462 0.00 0.00 0.00 4.00
39 40 7.117241 ACAACGATAATGTTACAAGTCAGTG 57.883 36.000 0.00 0.00 0.00 3.66
40 41 7.330208 GGTACAACGATAATGTTACAAGTCAGT 59.670 37.037 0.00 0.00 32.27 3.41
41 42 7.201496 GGGTACAACGATAATGTTACAAGTCAG 60.201 40.741 0.00 0.00 32.27 3.51
42 43 6.591062 GGGTACAACGATAATGTTACAAGTCA 59.409 38.462 0.00 0.00 32.27 3.41
43 44 6.815142 AGGGTACAACGATAATGTTACAAGTC 59.185 38.462 0.00 0.00 32.27 3.01
44 45 6.704310 AGGGTACAACGATAATGTTACAAGT 58.296 36.000 0.00 0.00 32.27 3.16
45 46 7.605410 AAGGGTACAACGATAATGTTACAAG 57.395 36.000 0.00 0.00 32.27 3.16
46 47 7.765360 CCTAAGGGTACAACGATAATGTTACAA 59.235 37.037 0.00 0.00 32.27 2.41
47 48 7.267128 CCTAAGGGTACAACGATAATGTTACA 58.733 38.462 0.00 0.00 32.27 2.41
48 49 6.703165 CCCTAAGGGTACAACGATAATGTTAC 59.297 42.308 0.00 0.00 38.25 2.50
49 50 6.819284 CCCTAAGGGTACAACGATAATGTTA 58.181 40.000 0.00 0.00 38.25 2.41
50 51 5.677567 CCCTAAGGGTACAACGATAATGTT 58.322 41.667 0.00 0.00 38.25 2.71
51 52 5.286267 CCCTAAGGGTACAACGATAATGT 57.714 43.478 0.00 0.00 38.25 2.71
66 67 6.376299 GTGTTTTATAGACCAAACCCCTAAGG 59.624 42.308 0.00 0.00 43.78 2.69
67 68 6.376299 GGTGTTTTATAGACCAAACCCCTAAG 59.624 42.308 0.00 0.00 39.94 2.18
68 69 6.247676 GGTGTTTTATAGACCAAACCCCTAA 58.752 40.000 0.00 0.00 39.94 2.69
69 70 5.281141 GGGTGTTTTATAGACCAAACCCCTA 60.281 44.000 12.51 0.00 41.96 3.53
70 71 4.509663 GGGTGTTTTATAGACCAAACCCCT 60.510 45.833 12.51 0.00 41.96 4.79
71 72 3.765511 GGGTGTTTTATAGACCAAACCCC 59.234 47.826 0.00 7.79 41.96 4.95
72 73 4.409187 TGGGTGTTTTATAGACCAAACCC 58.591 43.478 0.00 0.00 41.96 4.11
73 74 5.047590 CCTTGGGTGTTTTATAGACCAAACC 60.048 44.000 0.00 0.00 41.96 3.27
74 75 5.771165 TCCTTGGGTGTTTTATAGACCAAAC 59.229 40.000 0.00 0.00 41.96 2.93
75 76 5.954757 TCCTTGGGTGTTTTATAGACCAAA 58.045 37.500 0.00 0.00 41.96 3.28
76 77 5.566469 CTCCTTGGGTGTTTTATAGACCAA 58.434 41.667 0.00 0.00 41.96 3.67
77 78 4.566907 GCTCCTTGGGTGTTTTATAGACCA 60.567 45.833 0.00 0.00 41.96 4.02
78 79 3.945921 GCTCCTTGGGTGTTTTATAGACC 59.054 47.826 0.00 0.00 39.46 3.85
79 80 3.945921 GGCTCCTTGGGTGTTTTATAGAC 59.054 47.826 0.00 0.00 0.00 2.59
80 81 3.053917 GGGCTCCTTGGGTGTTTTATAGA 60.054 47.826 0.00 0.00 0.00 1.98
81 82 3.288092 GGGCTCCTTGGGTGTTTTATAG 58.712 50.000 0.00 0.00 0.00 1.31
82 83 2.650322 TGGGCTCCTTGGGTGTTTTATA 59.350 45.455 0.00 0.00 0.00 0.98
83 84 1.431243 TGGGCTCCTTGGGTGTTTTAT 59.569 47.619 0.00 0.00 0.00 1.40
84 85 0.854218 TGGGCTCCTTGGGTGTTTTA 59.146 50.000 0.00 0.00 0.00 1.52
85 86 0.759060 GTGGGCTCCTTGGGTGTTTT 60.759 55.000 0.00 0.00 0.00 2.43
86 87 1.152546 GTGGGCTCCTTGGGTGTTT 60.153 57.895 0.00 0.00 0.00 2.83
87 88 2.520968 GTGGGCTCCTTGGGTGTT 59.479 61.111 0.00 0.00 0.00 3.32
88 89 3.953775 CGTGGGCTCCTTGGGTGT 61.954 66.667 0.00 0.00 0.00 4.16
91 92 3.042733 TATGCGTGGGCTCCTTGGG 62.043 63.158 0.00 0.00 40.82 4.12
92 93 1.819632 GTATGCGTGGGCTCCTTGG 60.820 63.158 0.00 0.00 40.82 3.61
93 94 2.173669 CGTATGCGTGGGCTCCTTG 61.174 63.158 0.00 0.00 40.82 3.61
94 95 2.186903 CGTATGCGTGGGCTCCTT 59.813 61.111 0.00 0.00 40.82 3.36
95 96 3.849951 CCGTATGCGTGGGCTCCT 61.850 66.667 1.69 0.00 40.82 3.69
96 97 4.910585 CCCGTATGCGTGGGCTCC 62.911 72.222 1.69 0.00 38.90 4.70
101 102 1.136565 CTTTTGCCCGTATGCGTGG 59.863 57.895 1.69 4.45 36.15 4.94
102 103 0.519519 TTCTTTTGCCCGTATGCGTG 59.480 50.000 1.69 0.00 36.15 5.34
103 104 1.199097 CTTTCTTTTGCCCGTATGCGT 59.801 47.619 1.69 0.00 36.15 5.24
104 105 1.895051 CTTTCTTTTGCCCGTATGCG 58.105 50.000 0.00 0.00 37.95 4.73
105 106 1.067915 TGCTTTCTTTTGCCCGTATGC 60.068 47.619 0.00 0.00 0.00 3.14
106 107 3.057596 TCTTGCTTTCTTTTGCCCGTATG 60.058 43.478 0.00 0.00 0.00 2.39
107 108 3.153919 TCTTGCTTTCTTTTGCCCGTAT 58.846 40.909 0.00 0.00 0.00 3.06
108 109 2.577700 TCTTGCTTTCTTTTGCCCGTA 58.422 42.857 0.00 0.00 0.00 4.02
109 110 1.398692 TCTTGCTTTCTTTTGCCCGT 58.601 45.000 0.00 0.00 0.00 5.28
110 111 2.397549 CTTCTTGCTTTCTTTTGCCCG 58.602 47.619 0.00 0.00 0.00 6.13
111 112 2.759191 CCTTCTTGCTTTCTTTTGCCC 58.241 47.619 0.00 0.00 0.00 5.36
112 113 2.138320 GCCTTCTTGCTTTCTTTTGCC 58.862 47.619 0.00 0.00 0.00 4.52
113 114 2.798847 CTGCCTTCTTGCTTTCTTTTGC 59.201 45.455 0.00 0.00 0.00 3.68
114 115 4.311816 TCTGCCTTCTTGCTTTCTTTTG 57.688 40.909 0.00 0.00 0.00 2.44
115 116 4.403752 ACTTCTGCCTTCTTGCTTTCTTTT 59.596 37.500 0.00 0.00 0.00 2.27
116 117 3.956848 ACTTCTGCCTTCTTGCTTTCTTT 59.043 39.130 0.00 0.00 0.00 2.52
117 118 3.560105 ACTTCTGCCTTCTTGCTTTCTT 58.440 40.909 0.00 0.00 0.00 2.52
118 119 3.220674 ACTTCTGCCTTCTTGCTTTCT 57.779 42.857 0.00 0.00 0.00 2.52
119 120 4.614764 GCTTACTTCTGCCTTCTTGCTTTC 60.615 45.833 0.00 0.00 0.00 2.62
120 121 3.254411 GCTTACTTCTGCCTTCTTGCTTT 59.746 43.478 0.00 0.00 0.00 3.51
121 122 2.816672 GCTTACTTCTGCCTTCTTGCTT 59.183 45.455 0.00 0.00 0.00 3.91
122 123 2.224621 TGCTTACTTCTGCCTTCTTGCT 60.225 45.455 0.00 0.00 0.00 3.91
123 124 2.154462 TGCTTACTTCTGCCTTCTTGC 58.846 47.619 0.00 0.00 0.00 4.01
124 125 2.161211 GCTGCTTACTTCTGCCTTCTTG 59.839 50.000 0.00 0.00 0.00 3.02
125 126 2.224621 TGCTGCTTACTTCTGCCTTCTT 60.225 45.455 0.00 0.00 0.00 2.52
126 127 1.349026 TGCTGCTTACTTCTGCCTTCT 59.651 47.619 0.00 0.00 0.00 2.85
127 128 1.813513 TGCTGCTTACTTCTGCCTTC 58.186 50.000 0.00 0.00 0.00 3.46
128 129 1.882623 GTTGCTGCTTACTTCTGCCTT 59.117 47.619 0.00 0.00 0.00 4.35
129 130 1.202806 TGTTGCTGCTTACTTCTGCCT 60.203 47.619 0.00 0.00 0.00 4.75
130 131 1.198637 CTGTTGCTGCTTACTTCTGCC 59.801 52.381 0.00 0.00 0.00 4.85
131 132 2.096019 GTCTGTTGCTGCTTACTTCTGC 60.096 50.000 0.00 0.00 0.00 4.26
132 133 2.481952 GGTCTGTTGCTGCTTACTTCTG 59.518 50.000 0.00 0.00 0.00 3.02
133 134 2.104792 TGGTCTGTTGCTGCTTACTTCT 59.895 45.455 0.00 0.00 0.00 2.85
134 135 2.494059 TGGTCTGTTGCTGCTTACTTC 58.506 47.619 0.00 0.00 0.00 3.01
135 136 2.638480 TGGTCTGTTGCTGCTTACTT 57.362 45.000 0.00 0.00 0.00 2.24
136 137 2.867109 ATGGTCTGTTGCTGCTTACT 57.133 45.000 0.00 0.00 0.00 2.24
137 138 3.861840 TCTATGGTCTGTTGCTGCTTAC 58.138 45.455 0.00 0.00 0.00 2.34
138 139 3.769300 TCTCTATGGTCTGTTGCTGCTTA 59.231 43.478 0.00 0.00 0.00 3.09
139 140 2.568956 TCTCTATGGTCTGTTGCTGCTT 59.431 45.455 0.00 0.00 0.00 3.91
140 141 2.168106 CTCTCTATGGTCTGTTGCTGCT 59.832 50.000 0.00 0.00 0.00 4.24
141 142 2.548875 CTCTCTATGGTCTGTTGCTGC 58.451 52.381 0.00 0.00 0.00 5.25
142 143 2.093816 TGCTCTCTATGGTCTGTTGCTG 60.094 50.000 0.00 0.00 0.00 4.41
143 144 2.182827 TGCTCTCTATGGTCTGTTGCT 58.817 47.619 0.00 0.00 0.00 3.91
144 145 2.675348 GTTGCTCTCTATGGTCTGTTGC 59.325 50.000 0.00 0.00 0.00 4.17
145 146 4.199432 AGTTGCTCTCTATGGTCTGTTG 57.801 45.455 0.00 0.00 0.00 3.33
146 147 4.142049 GCTAGTTGCTCTCTATGGTCTGTT 60.142 45.833 0.00 0.00 38.95 3.16
147 148 3.383185 GCTAGTTGCTCTCTATGGTCTGT 59.617 47.826 0.00 0.00 38.95 3.41
148 149 3.243704 GGCTAGTTGCTCTCTATGGTCTG 60.244 52.174 0.00 0.00 42.39 3.51
149 150 2.962421 GGCTAGTTGCTCTCTATGGTCT 59.038 50.000 0.00 0.00 42.39 3.85
150 151 2.695666 TGGCTAGTTGCTCTCTATGGTC 59.304 50.000 0.00 0.00 42.39 4.02
151 152 2.432510 GTGGCTAGTTGCTCTCTATGGT 59.567 50.000 0.00 0.00 42.39 3.55
152 153 2.224161 GGTGGCTAGTTGCTCTCTATGG 60.224 54.545 0.00 0.00 42.39 2.74
153 154 2.544694 CGGTGGCTAGTTGCTCTCTATG 60.545 54.545 0.00 0.00 42.39 2.23
154 155 1.683917 CGGTGGCTAGTTGCTCTCTAT 59.316 52.381 0.00 0.00 42.39 1.98
155 156 1.103803 CGGTGGCTAGTTGCTCTCTA 58.896 55.000 0.00 0.00 42.39 2.43
156 157 0.612174 TCGGTGGCTAGTTGCTCTCT 60.612 55.000 0.00 0.00 42.39 3.10
157 158 0.246635 TTCGGTGGCTAGTTGCTCTC 59.753 55.000 0.00 0.00 42.39 3.20
158 159 0.685097 TTTCGGTGGCTAGTTGCTCT 59.315 50.000 0.00 0.00 42.39 4.09
159 160 0.796927 GTTTCGGTGGCTAGTTGCTC 59.203 55.000 0.00 0.00 42.39 4.26
160 161 0.107831 TGTTTCGGTGGCTAGTTGCT 59.892 50.000 0.00 0.00 42.39 3.91
161 162 0.517316 CTGTTTCGGTGGCTAGTTGC 59.483 55.000 0.00 0.00 41.94 4.17
162 163 0.517316 GCTGTTTCGGTGGCTAGTTG 59.483 55.000 0.00 0.00 0.00 3.16
163 164 0.107831 TGCTGTTTCGGTGGCTAGTT 59.892 50.000 0.00 0.00 0.00 2.24
164 165 0.107831 TTGCTGTTTCGGTGGCTAGT 59.892 50.000 0.00 0.00 0.00 2.57
165 166 0.517316 GTTGCTGTTTCGGTGGCTAG 59.483 55.000 0.00 0.00 0.00 3.42
166 167 0.179043 TGTTGCTGTTTCGGTGGCTA 60.179 50.000 0.00 0.00 0.00 3.93
167 168 0.823356 ATGTTGCTGTTTCGGTGGCT 60.823 50.000 0.00 0.00 0.00 4.75
168 169 0.387239 GATGTTGCTGTTTCGGTGGC 60.387 55.000 0.00 0.00 0.00 5.01
169 170 0.240945 GGATGTTGCTGTTTCGGTGG 59.759 55.000 0.00 0.00 0.00 4.61
170 171 0.950836 TGGATGTTGCTGTTTCGGTG 59.049 50.000 0.00 0.00 0.00 4.94
171 172 0.951558 GTGGATGTTGCTGTTTCGGT 59.048 50.000 0.00 0.00 0.00 4.69
172 173 0.240945 GGTGGATGTTGCTGTTTCGG 59.759 55.000 0.00 0.00 0.00 4.30
173 174 0.240945 GGGTGGATGTTGCTGTTTCG 59.759 55.000 0.00 0.00 0.00 3.46
174 175 0.240945 CGGGTGGATGTTGCTGTTTC 59.759 55.000 0.00 0.00 0.00 2.78
175 176 0.179004 TCGGGTGGATGTTGCTGTTT 60.179 50.000 0.00 0.00 0.00 2.83
176 177 0.179004 TTCGGGTGGATGTTGCTGTT 60.179 50.000 0.00 0.00 0.00 3.16
177 178 0.606401 CTTCGGGTGGATGTTGCTGT 60.606 55.000 0.00 0.00 0.00 4.40
178 179 0.321564 TCTTCGGGTGGATGTTGCTG 60.322 55.000 0.00 0.00 0.00 4.41
179 180 0.036010 CTCTTCGGGTGGATGTTGCT 60.036 55.000 0.00 0.00 0.00 3.91
180 181 1.026718 CCTCTTCGGGTGGATGTTGC 61.027 60.000 0.00 0.00 0.00 4.17
181 182 0.613260 TCCTCTTCGGGTGGATGTTG 59.387 55.000 0.00 0.00 33.23 3.33
182 183 0.905357 CTCCTCTTCGGGTGGATGTT 59.095 55.000 0.00 0.00 37.04 2.71
183 184 1.617947 GCTCCTCTTCGGGTGGATGT 61.618 60.000 0.00 0.00 37.04 3.06
184 185 1.144936 GCTCCTCTTCGGGTGGATG 59.855 63.158 0.00 0.00 37.04 3.51
185 186 1.306141 TGCTCCTCTTCGGGTGGAT 60.306 57.895 0.00 0.00 37.04 3.41
186 187 1.984570 CTGCTCCTCTTCGGGTGGA 60.985 63.158 0.00 0.00 36.34 4.02
187 188 2.581354 CTGCTCCTCTTCGGGTGG 59.419 66.667 0.00 0.00 0.00 4.61
188 189 2.125350 GCTGCTCCTCTTCGGGTG 60.125 66.667 0.00 0.00 0.00 4.61
189 190 2.516048 TAGGCTGCTCCTCTTCGGGT 62.516 60.000 0.00 0.00 43.20 5.28
190 191 1.330655 TTAGGCTGCTCCTCTTCGGG 61.331 60.000 0.00 0.00 43.20 5.14
191 192 0.103937 CTTAGGCTGCTCCTCTTCGG 59.896 60.000 0.00 0.00 43.20 4.30
192 193 0.529555 GCTTAGGCTGCTCCTCTTCG 60.530 60.000 0.00 0.00 43.20 3.79
193 194 0.179059 GGCTTAGGCTGCTCCTCTTC 60.179 60.000 0.00 0.00 43.20 2.87
194 195 0.620121 AGGCTTAGGCTGCTCCTCTT 60.620 55.000 7.72 0.00 43.20 2.85
195 196 0.620121 AAGGCTTAGGCTGCTCCTCT 60.620 55.000 9.59 0.00 43.20 3.69
196 197 0.463474 CAAGGCTTAGGCTGCTCCTC 60.463 60.000 9.59 0.00 43.20 3.71
198 199 1.452833 CCAAGGCTTAGGCTGCTCC 60.453 63.158 9.59 0.00 38.81 4.70
199 200 4.232310 CCAAGGCTTAGGCTGCTC 57.768 61.111 9.59 0.00 38.81 4.26
205 206 1.000396 AAGCTGGCCAAGGCTTAGG 60.000 57.895 26.14 5.25 45.41 2.69
206 207 1.034292 GGAAGCTGGCCAAGGCTTAG 61.034 60.000 27.04 6.86 46.91 2.18
207 208 1.000896 GGAAGCTGGCCAAGGCTTA 60.001 57.895 27.04 0.00 46.91 3.09
209 210 4.372999 GGGAAGCTGGCCAAGGCT 62.373 66.667 13.53 13.53 41.60 4.58
210 211 3.893961 AAGGGAAGCTGGCCAAGGC 62.894 63.158 7.01 8.11 41.06 4.35
211 212 1.680314 GAAGGGAAGCTGGCCAAGG 60.680 63.158 7.01 0.00 0.00 3.61
212 213 1.680314 GGAAGGGAAGCTGGCCAAG 60.680 63.158 7.01 1.85 0.00 3.61
213 214 2.142292 GAGGAAGGGAAGCTGGCCAA 62.142 60.000 7.01 0.00 0.00 4.52
214 215 2.532715 AGGAAGGGAAGCTGGCCA 60.533 61.111 4.71 4.71 0.00 5.36
215 216 2.273776 GAGGAAGGGAAGCTGGCC 59.726 66.667 0.00 0.00 0.00 5.36
216 217 2.264120 GAGGAGGAAGGGAAGCTGGC 62.264 65.000 0.00 0.00 0.00 4.85
217 218 1.631071 GGAGGAGGAAGGGAAGCTGG 61.631 65.000 0.00 0.00 0.00 4.85
218 219 0.911525 TGGAGGAGGAAGGGAAGCTG 60.912 60.000 0.00 0.00 0.00 4.24
219 220 0.045469 ATGGAGGAGGAAGGGAAGCT 59.955 55.000 0.00 0.00 0.00 3.74
220 221 1.418264 GTATGGAGGAGGAAGGGAAGC 59.582 57.143 0.00 0.00 0.00 3.86
221 222 2.703007 CTGTATGGAGGAGGAAGGGAAG 59.297 54.545 0.00 0.00 0.00 3.46
222 223 2.764269 CTGTATGGAGGAGGAAGGGAA 58.236 52.381 0.00 0.00 0.00 3.97
223 224 1.692762 GCTGTATGGAGGAGGAAGGGA 60.693 57.143 0.00 0.00 0.00 4.20
224 225 0.761802 GCTGTATGGAGGAGGAAGGG 59.238 60.000 0.00 0.00 0.00 3.95
225 226 1.691434 GAGCTGTATGGAGGAGGAAGG 59.309 57.143 0.00 0.00 0.00 3.46
226 227 2.676748 AGAGCTGTATGGAGGAGGAAG 58.323 52.381 0.00 0.00 0.00 3.46
227 228 2.856760 AGAGCTGTATGGAGGAGGAA 57.143 50.000 0.00 0.00 0.00 3.36
228 229 2.109128 CCTAGAGCTGTATGGAGGAGGA 59.891 54.545 0.00 0.00 0.00 3.71
229 230 2.109128 TCCTAGAGCTGTATGGAGGAGG 59.891 54.545 0.00 0.00 0.00 4.30
230 231 3.420893 CTCCTAGAGCTGTATGGAGGAG 58.579 54.545 19.89 16.43 42.98 3.69
231 232 2.786445 ACTCCTAGAGCTGTATGGAGGA 59.214 50.000 25.98 16.30 46.12 3.71
232 233 3.237268 ACTCCTAGAGCTGTATGGAGG 57.763 52.381 25.98 13.61 46.12 4.30
233 234 5.133941 TGTTACTCCTAGAGCTGTATGGAG 58.866 45.833 23.24 23.24 46.93 3.86
234 235 5.125367 TGTTACTCCTAGAGCTGTATGGA 57.875 43.478 0.00 0.00 32.04 3.41
235 236 6.183360 ACAATGTTACTCCTAGAGCTGTATGG 60.183 42.308 0.00 0.00 32.04 2.74
236 237 6.810911 ACAATGTTACTCCTAGAGCTGTATG 58.189 40.000 0.00 0.00 32.04 2.39
237 238 7.780745 AGTACAATGTTACTCCTAGAGCTGTAT 59.219 37.037 0.00 0.00 32.04 2.29
238 239 7.117397 AGTACAATGTTACTCCTAGAGCTGTA 58.883 38.462 0.00 0.00 32.04 2.74
239 240 5.952947 AGTACAATGTTACTCCTAGAGCTGT 59.047 40.000 0.00 0.00 32.04 4.40
240 241 6.458232 AGTACAATGTTACTCCTAGAGCTG 57.542 41.667 0.00 0.00 32.04 4.24
241 242 7.173562 CGATAGTACAATGTTACTCCTAGAGCT 59.826 40.741 0.00 0.00 32.04 4.09
242 243 7.172875 TCGATAGTACAATGTTACTCCTAGAGC 59.827 40.741 0.00 0.00 32.52 4.09
243 244 8.604640 TCGATAGTACAATGTTACTCCTAGAG 57.395 38.462 0.00 0.00 34.56 2.43
244 245 8.834465 GTTCGATAGTACAATGTTACTCCTAGA 58.166 37.037 0.00 0.00 36.30 2.43
245 246 8.618677 TGTTCGATAGTACAATGTTACTCCTAG 58.381 37.037 0.00 0.00 43.61 3.02
246 247 8.510243 TGTTCGATAGTACAATGTTACTCCTA 57.490 34.615 0.00 0.00 43.61 2.94
247 248 7.400599 TGTTCGATAGTACAATGTTACTCCT 57.599 36.000 0.00 0.00 43.61 3.69
259 260 7.163845 CGAGTGTAGTTTGATGTTCGATAGTAC 59.836 40.741 0.00 0.00 36.86 2.73
260 261 7.184779 CGAGTGTAGTTTGATGTTCGATAGTA 58.815 38.462 0.00 0.00 37.40 1.82
261 262 6.028368 CGAGTGTAGTTTGATGTTCGATAGT 58.972 40.000 0.00 0.00 37.40 2.12
262 263 5.455849 CCGAGTGTAGTTTGATGTTCGATAG 59.544 44.000 0.00 0.00 0.00 2.08
263 264 5.337554 CCGAGTGTAGTTTGATGTTCGATA 58.662 41.667 0.00 0.00 0.00 2.92
264 265 4.174009 CCGAGTGTAGTTTGATGTTCGAT 58.826 43.478 0.00 0.00 0.00 3.59
265 266 3.571571 CCGAGTGTAGTTTGATGTTCGA 58.428 45.455 0.00 0.00 0.00 3.71
266 267 2.092211 GCCGAGTGTAGTTTGATGTTCG 59.908 50.000 0.00 0.00 0.00 3.95
267 268 3.064207 TGCCGAGTGTAGTTTGATGTTC 58.936 45.455 0.00 0.00 0.00 3.18
268 269 3.067106 CTGCCGAGTGTAGTTTGATGTT 58.933 45.455 0.00 0.00 0.00 2.71
269 270 2.299013 TCTGCCGAGTGTAGTTTGATGT 59.701 45.455 0.00 0.00 0.00 3.06
270 271 2.668457 GTCTGCCGAGTGTAGTTTGATG 59.332 50.000 0.00 0.00 0.00 3.07
271 272 2.563179 AGTCTGCCGAGTGTAGTTTGAT 59.437 45.455 0.00 0.00 0.00 2.57
272 273 1.961394 AGTCTGCCGAGTGTAGTTTGA 59.039 47.619 0.00 0.00 0.00 2.69
273 274 2.440539 AGTCTGCCGAGTGTAGTTTG 57.559 50.000 0.00 0.00 0.00 2.93
274 275 2.492484 CCTAGTCTGCCGAGTGTAGTTT 59.508 50.000 0.00 0.00 0.00 2.66
275 276 2.093106 CCTAGTCTGCCGAGTGTAGTT 58.907 52.381 0.00 0.00 0.00 2.24
276 277 1.682394 CCCTAGTCTGCCGAGTGTAGT 60.682 57.143 0.00 0.00 0.00 2.73
277 278 1.025812 CCCTAGTCTGCCGAGTGTAG 58.974 60.000 0.00 0.00 0.00 2.74
278 279 0.395311 CCCCTAGTCTGCCGAGTGTA 60.395 60.000 0.00 0.00 0.00 2.90
279 280 1.682684 CCCCTAGTCTGCCGAGTGT 60.683 63.158 0.00 0.00 0.00 3.55
280 281 1.682684 ACCCCTAGTCTGCCGAGTG 60.683 63.158 0.00 0.00 0.00 3.51
281 282 1.682684 CACCCCTAGTCTGCCGAGT 60.683 63.158 0.00 0.00 0.00 4.18
282 283 1.258445 AACACCCCTAGTCTGCCGAG 61.258 60.000 0.00 0.00 0.00 4.63
283 284 0.040058 TAACACCCCTAGTCTGCCGA 59.960 55.000 0.00 0.00 0.00 5.54
284 285 1.068741 GATAACACCCCTAGTCTGCCG 59.931 57.143 0.00 0.00 0.00 5.69
285 286 2.365941 GAGATAACACCCCTAGTCTGCC 59.634 54.545 0.00 0.00 0.00 4.85
286 287 3.301274 AGAGATAACACCCCTAGTCTGC 58.699 50.000 0.00 0.00 0.00 4.26
287 288 3.892588 GGAGAGATAACACCCCTAGTCTG 59.107 52.174 0.00 0.00 0.00 3.51
288 289 3.435313 CGGAGAGATAACACCCCTAGTCT 60.435 52.174 0.00 0.00 0.00 3.24
289 290 2.885894 CGGAGAGATAACACCCCTAGTC 59.114 54.545 0.00 0.00 0.00 2.59
290 291 2.424523 CCGGAGAGATAACACCCCTAGT 60.425 54.545 0.00 0.00 0.00 2.57
291 292 2.158505 TCCGGAGAGATAACACCCCTAG 60.159 54.545 0.00 0.00 0.00 3.02
292 293 1.854939 TCCGGAGAGATAACACCCCTA 59.145 52.381 0.00 0.00 0.00 3.53
293 294 0.635009 TCCGGAGAGATAACACCCCT 59.365 55.000 0.00 0.00 0.00 4.79
294 295 1.041437 CTCCGGAGAGATAACACCCC 58.959 60.000 28.21 0.00 43.39 4.95
295 296 2.068834 TCTCCGGAGAGATAACACCC 57.931 55.000 30.49 0.00 44.42 4.61
309 310 2.344203 ACAGGTTCCGAGCTCTCCG 61.344 63.158 12.85 0.00 0.00 4.63
310 311 1.216710 CACAGGTTCCGAGCTCTCC 59.783 63.158 12.85 8.84 0.00 3.71
311 312 1.174783 TACACAGGTTCCGAGCTCTC 58.825 55.000 12.85 0.00 0.00 3.20
312 313 1.478510 CATACACAGGTTCCGAGCTCT 59.521 52.381 12.85 0.00 0.00 4.09
313 314 1.204941 ACATACACAGGTTCCGAGCTC 59.795 52.381 2.73 2.73 0.00 4.09
314 315 1.204941 GACATACACAGGTTCCGAGCT 59.795 52.381 0.00 0.00 0.00 4.09
315 316 1.641577 GACATACACAGGTTCCGAGC 58.358 55.000 0.00 0.00 0.00 5.03
316 317 1.469251 CGGACATACACAGGTTCCGAG 60.469 57.143 2.10 0.00 41.22 4.63
317 318 0.528924 CGGACATACACAGGTTCCGA 59.471 55.000 2.10 0.00 41.22 4.55
318 319 0.459585 CCGGACATACACAGGTTCCG 60.460 60.000 0.00 1.29 38.79 4.30
319 320 0.743345 GCCGGACATACACAGGTTCC 60.743 60.000 5.05 0.00 0.00 3.62
320 321 1.082117 CGCCGGACATACACAGGTTC 61.082 60.000 5.05 0.00 0.00 3.62
321 322 1.079405 CGCCGGACATACACAGGTT 60.079 57.895 5.05 0.00 0.00 3.50
322 323 0.966875 TACGCCGGACATACACAGGT 60.967 55.000 5.05 0.00 0.00 4.00
323 324 0.526954 GTACGCCGGACATACACAGG 60.527 60.000 5.05 0.00 0.00 4.00
324 325 0.526954 GGTACGCCGGACATACACAG 60.527 60.000 5.05 0.00 0.00 3.66
325 326 1.512230 GGTACGCCGGACATACACA 59.488 57.895 5.05 0.00 0.00 3.72
326 327 4.407551 GGTACGCCGGACATACAC 57.592 61.111 5.05 0.00 0.00 2.90
344 345 3.573491 GTTGGTATGAGCGGGCGC 61.573 66.667 0.00 0.00 42.33 6.53
345 346 2.895372 GGTTGGTATGAGCGGGCG 60.895 66.667 0.00 0.00 0.00 6.13
346 347 1.523938 GAGGTTGGTATGAGCGGGC 60.524 63.158 0.00 0.00 0.00 6.13
347 348 1.227263 CGAGGTTGGTATGAGCGGG 60.227 63.158 0.00 0.00 0.00 6.13
348 349 1.883084 GCGAGGTTGGTATGAGCGG 60.883 63.158 0.00 0.00 0.00 5.52
349 350 1.883084 GGCGAGGTTGGTATGAGCG 60.883 63.158 0.00 0.00 0.00 5.03
350 351 0.530870 GAGGCGAGGTTGGTATGAGC 60.531 60.000 0.00 0.00 0.00 4.26
351 352 1.115467 AGAGGCGAGGTTGGTATGAG 58.885 55.000 0.00 0.00 0.00 2.90
352 353 0.824109 CAGAGGCGAGGTTGGTATGA 59.176 55.000 0.00 0.00 0.00 2.15
353 354 0.179073 CCAGAGGCGAGGTTGGTATG 60.179 60.000 0.00 0.00 0.00 2.39
354 355 0.325296 TCCAGAGGCGAGGTTGGTAT 60.325 55.000 0.00 0.00 32.51 2.73
355 356 0.970937 CTCCAGAGGCGAGGTTGGTA 60.971 60.000 0.00 0.00 32.51 3.25
356 357 2.203788 TCCAGAGGCGAGGTTGGT 60.204 61.111 0.00 0.00 32.51 3.67
357 358 2.581354 CTCCAGAGGCGAGGTTGG 59.419 66.667 0.00 0.00 0.00 3.77
358 359 2.125350 GCTCCAGAGGCGAGGTTG 60.125 66.667 0.00 0.00 0.00 3.77
359 360 3.394836 GGCTCCAGAGGCGAGGTT 61.395 66.667 5.38 0.00 44.15 3.50
366 367 2.509916 GCTGATGGGCTCCAGAGG 59.490 66.667 0.00 0.00 36.75 3.69
367 368 2.108566 CGCTGATGGGCTCCAGAG 59.891 66.667 0.00 0.00 36.75 3.35
368 369 4.166888 GCGCTGATGGGCTCCAGA 62.167 66.667 0.00 0.00 46.81 3.86
375 376 4.598894 CTCGAGGGCGCTGATGGG 62.599 72.222 8.56 0.00 37.46 4.00
384 385 4.851214 AGGAGGAGGCTCGAGGGC 62.851 72.222 15.58 7.43 41.20 5.19
385 386 2.520741 GAGGAGGAGGCTCGAGGG 60.521 72.222 15.58 0.00 0.00 4.30
386 387 1.528309 GAGAGGAGGAGGCTCGAGG 60.528 68.421 15.58 0.00 0.00 4.63
387 388 0.106719 AAGAGAGGAGGAGGCTCGAG 60.107 60.000 8.45 8.45 33.98 4.04
388 389 0.333312 AAAGAGAGGAGGAGGCTCGA 59.667 55.000 8.69 0.00 33.98 4.04
389 390 1.953686 CTAAAGAGAGGAGGAGGCTCG 59.046 57.143 8.69 0.00 33.98 5.03
390 391 1.686587 GCTAAAGAGAGGAGGAGGCTC 59.313 57.143 5.78 5.78 0.00 4.70
391 392 1.691163 GGCTAAAGAGAGGAGGAGGCT 60.691 57.143 0.00 0.00 0.00 4.58
392 393 0.756294 GGCTAAAGAGAGGAGGAGGC 59.244 60.000 0.00 0.00 0.00 4.70
393 394 2.166907 TGGCTAAAGAGAGGAGGAGG 57.833 55.000 0.00 0.00 0.00 4.30
394 395 2.632512 GGATGGCTAAAGAGAGGAGGAG 59.367 54.545 0.00 0.00 0.00 3.69
395 396 2.683768 GGATGGCTAAAGAGAGGAGGA 58.316 52.381 0.00 0.00 0.00 3.71
396 397 1.696884 GGGATGGCTAAAGAGAGGAGG 59.303 57.143 0.00 0.00 0.00 4.30
397 398 2.402564 TGGGATGGCTAAAGAGAGGAG 58.597 52.381 0.00 0.00 0.00 3.69
398 399 2.568546 TGGGATGGCTAAAGAGAGGA 57.431 50.000 0.00 0.00 0.00 3.71
399 400 2.224719 CCATGGGATGGCTAAAGAGAGG 60.225 54.545 2.85 0.00 44.70 3.69
400 401 3.137446 CCATGGGATGGCTAAAGAGAG 57.863 52.381 2.85 0.00 44.70 3.20
455 456 1.908299 CCTTGCAGGAACAACCCCC 60.908 63.158 0.00 0.00 37.67 5.40
456 457 2.574018 GCCTTGCAGGAACAACCCC 61.574 63.158 0.00 0.00 37.67 4.95
457 458 2.574018 GGCCTTGCAGGAACAACCC 61.574 63.158 0.00 0.00 37.67 4.11
458 459 1.531602 AGGCCTTGCAGGAACAACC 60.532 57.895 0.00 0.00 37.67 3.77
459 460 1.662044 CAGGCCTTGCAGGAACAAC 59.338 57.895 0.00 0.00 37.67 3.32
460 461 1.531365 CCAGGCCTTGCAGGAACAA 60.531 57.895 0.00 0.00 37.67 2.83
461 462 2.115910 CCAGGCCTTGCAGGAACA 59.884 61.111 0.00 0.00 37.67 3.18
462 463 2.677875 CCCAGGCCTTGCAGGAAC 60.678 66.667 0.00 0.00 37.67 3.62
463 464 4.684134 GCCCAGGCCTTGCAGGAA 62.684 66.667 17.30 0.00 37.67 3.36
479 480 5.294552 GTCACTATACCATCCACTTTGAAGC 59.705 44.000 0.00 0.00 0.00 3.86
482 483 4.707934 TCGTCACTATACCATCCACTTTGA 59.292 41.667 0.00 0.00 0.00 2.69
484 485 4.464951 TGTCGTCACTATACCATCCACTTT 59.535 41.667 0.00 0.00 0.00 2.66
485 486 4.021229 TGTCGTCACTATACCATCCACTT 58.979 43.478 0.00 0.00 0.00 3.16
516 517 4.645136 CCCTTGCTCTGTATCTGTGTAGTA 59.355 45.833 0.00 0.00 0.00 1.82
524 525 1.195115 TTCGCCCTTGCTCTGTATCT 58.805 50.000 0.00 0.00 34.43 1.98
527 528 0.107703 CCATTCGCCCTTGCTCTGTA 60.108 55.000 0.00 0.00 34.43 2.74
542 543 5.306160 CCCTAATTTTCTCCATGCATCCATT 59.694 40.000 0.00 0.00 0.00 3.16
552 553 3.189606 TCCAGAGCCCTAATTTTCTCCA 58.810 45.455 0.00 0.00 0.00 3.86
561 562 0.253630 AACCCCATCCAGAGCCCTAA 60.254 55.000 0.00 0.00 0.00 2.69
562 563 0.253630 AAACCCCATCCAGAGCCCTA 60.254 55.000 0.00 0.00 0.00 3.53
570 571 1.062886 TCCACACAAAAACCCCATCCA 60.063 47.619 0.00 0.00 0.00 3.41
572 573 1.000717 CGTCCACACAAAAACCCCATC 60.001 52.381 0.00 0.00 0.00 3.51
578 579 1.670791 TCCTCCGTCCACACAAAAAC 58.329 50.000 0.00 0.00 0.00 2.43
589 590 1.095600 GGCTTCCAAAATCCTCCGTC 58.904 55.000 0.00 0.00 0.00 4.79
592 593 2.289565 CGTAGGCTTCCAAAATCCTCC 58.710 52.381 0.00 0.00 33.15 4.30
594 595 2.304761 TCACGTAGGCTTCCAAAATCCT 59.695 45.455 0.00 0.00 35.25 3.24
599 600 0.320073 CCGTCACGTAGGCTTCCAAA 60.320 55.000 0.00 0.00 0.00 3.28
601 602 1.466025 AACCGTCACGTAGGCTTCCA 61.466 55.000 0.00 0.00 0.00 3.53
615 616 2.184167 CAGACGCCCAAACAACCGT 61.184 57.895 0.00 0.00 36.53 4.83
619 620 0.179124 GTTTGCAGACGCCCAAACAA 60.179 50.000 10.36 0.00 46.10 2.83
624 625 2.281484 GAGGTTTGCAGACGCCCA 60.281 61.111 0.70 0.00 37.32 5.36
627 628 3.056328 GGGGAGGTTTGCAGACGC 61.056 66.667 0.70 0.00 39.24 5.19
632 633 2.777960 AAGCTGGGGGAGGTTTGCA 61.778 57.895 0.00 0.00 39.46 4.08
633 634 2.118294 AAGCTGGGGGAGGTTTGC 59.882 61.111 0.00 0.00 39.46 3.68
639 640 4.120755 GAGGCCAAGCTGGGGGAG 62.121 72.222 9.87 0.00 38.19 4.30
642 643 4.437587 CTGGAGGCCAAGCTGGGG 62.438 72.222 9.87 4.60 38.19 4.96
648 649 1.160137 CTCGAAAACTGGAGGCCAAG 58.840 55.000 5.01 1.33 30.80 3.61
663 664 1.066502 TCCGCATGTCCAAATTCTCGA 60.067 47.619 0.00 0.00 0.00 4.04
677 678 4.637483 AAATTTCACAATCGATCCGCAT 57.363 36.364 0.00 0.00 0.00 4.73
681 682 7.254084 GGTGCATTAAAATTTCACAATCGATCC 60.254 37.037 0.00 0.00 0.00 3.36
684 685 5.570973 CGGTGCATTAAAATTTCACAATCGA 59.429 36.000 8.64 0.00 0.00 3.59
689 690 4.938080 ACACGGTGCATTAAAATTTCACA 58.062 34.783 8.30 0.00 0.00 3.58
695 696 4.219507 TGATCCAACACGGTGCATTAAAAT 59.780 37.500 8.30 0.00 35.57 1.82
696 697 3.570125 TGATCCAACACGGTGCATTAAAA 59.430 39.130 8.30 0.00 35.57 1.52
700 701 1.167851 CTGATCCAACACGGTGCATT 58.832 50.000 8.30 0.00 35.57 3.56
762 765 2.349886 CACTAAAGACATCTTCAGCGCC 59.650 50.000 2.29 0.00 34.61 6.53
783 786 7.602753 ACTCCACTTATTAATGGTTCTTTTGC 58.397 34.615 0.00 0.00 37.27 3.68
1716 3344 1.056700 CGATCTCCCCCTCCACCATT 61.057 60.000 0.00 0.00 0.00 3.16
1946 3574 7.312657 AGATATAATTATGCATCGTTGGCAG 57.687 36.000 0.19 0.00 45.68 4.85
2034 3670 1.378531 GCTGCATTGACCGAACCATA 58.621 50.000 0.00 0.00 0.00 2.74
2178 6230 1.335182 ACCTCGATGTGCAGTATCTCG 59.665 52.381 8.71 3.86 0.00 4.04
2202 6254 5.133660 TGTTTAATATATGCTGGGTCTGGGT 59.866 40.000 0.00 0.00 0.00 4.51
2203 6255 5.473504 GTGTTTAATATATGCTGGGTCTGGG 59.526 44.000 0.00 0.00 0.00 4.45
2204 6256 6.299141 AGTGTTTAATATATGCTGGGTCTGG 58.701 40.000 0.00 0.00 0.00 3.86
2205 6257 6.992123 TGAGTGTTTAATATATGCTGGGTCTG 59.008 38.462 0.00 0.00 0.00 3.51
2206 6258 7.136822 TGAGTGTTTAATATATGCTGGGTCT 57.863 36.000 0.00 0.00 0.00 3.85
2207 6259 7.986085 ATGAGTGTTTAATATATGCTGGGTC 57.014 36.000 0.00 0.00 0.00 4.46
2222 6274 5.829924 AGGATGACTGAACAAATGAGTGTTT 59.170 36.000 0.00 0.00 41.78 2.83
2223 6275 5.380043 AGGATGACTGAACAAATGAGTGTT 58.620 37.500 0.00 0.00 44.38 3.32
2268 6324 1.485124 TGGATAGCGCAGGAGAAGAA 58.515 50.000 11.47 0.00 0.00 2.52
2306 6363 1.615384 GGCTGGAGCAGACTGGAAAAT 60.615 52.381 4.26 0.00 44.36 1.82
2603 6660 2.364722 TTTGGCCCTAGCACCAGCAA 62.365 55.000 0.00 0.00 45.49 3.91
2655 6845 1.347320 GGTAAGGTCAGACGCTTTCG 58.653 55.000 8.93 0.00 42.43 3.46
2680 6870 0.801872 TGCATCAATGAAACGGGTCG 59.198 50.000 0.00 0.00 0.00 4.79
2683 6873 1.135315 CAGGTGCATCAATGAAACGGG 60.135 52.381 0.00 0.00 0.00 5.28
2698 6888 7.397221 TGGAAATATATAGGCAATCTCAGGTG 58.603 38.462 0.00 0.00 0.00 4.00
2706 7050 7.805163 TCGGATCATGGAAATATATAGGCAAT 58.195 34.615 0.00 0.00 0.00 3.56
2710 7054 7.015098 AGAGCTCGGATCATGGAAATATATAGG 59.985 40.741 8.37 0.00 0.00 2.57
2717 7061 3.853355 AAGAGCTCGGATCATGGAAAT 57.147 42.857 8.37 0.00 0.00 2.17
2727 7849 0.991920 ATTCCCCAAAAGAGCTCGGA 59.008 50.000 8.37 4.79 0.00 4.55
2729 7851 1.740025 GTGATTCCCCAAAAGAGCTCG 59.260 52.381 8.37 0.00 0.00 5.03
2774 7896 9.632638 ACAAACATAGATGCCTAAATACTCAAT 57.367 29.630 0.00 0.00 0.00 2.57
2800 7922 6.349280 CGAAAGATTCATGCCTTGGTTAAGAA 60.349 38.462 0.00 0.00 35.92 2.52
2892 8014 8.233190 GCATTAGATAAAATGATAGGTCACAGC 58.767 37.037 0.91 0.00 38.84 4.40
2961 8083 7.704789 GCCATCATATAAAGGCAAAGAAAAG 57.295 36.000 0.00 0.00 46.26 2.27
3021 8143 3.581101 TCAGCCTAGCTCCATGTAAGAT 58.419 45.455 0.00 0.00 36.40 2.40
3082 8204 6.211584 AGAAATCACAAGCAGAGTTACCTAGA 59.788 38.462 0.00 0.00 0.00 2.43
3108 8230 0.911525 AGCACTGGATACTGCACCCT 60.912 55.000 0.00 0.00 40.06 4.34
3201 8323 4.261197 CCTGGCTCAAACACTAAAGAACAC 60.261 45.833 0.00 0.00 0.00 3.32
3271 9793 7.375053 ACACATAGACAAACAACAAAACAAGT 58.625 30.769 0.00 0.00 0.00 3.16
3334 9856 3.034721 ACACAAATGCATGGCAAAGAG 57.965 42.857 0.00 0.00 43.62 2.85
3337 9859 3.488721 GCAAAACACAAATGCATGGCAAA 60.489 39.130 0.00 0.00 43.62 3.68
3356 9884 5.936372 CCATTCTATAGCAGAGCATAAGCAA 59.064 40.000 0.00 0.00 45.49 3.91
3357 9885 5.485620 CCATTCTATAGCAGAGCATAAGCA 58.514 41.667 0.00 0.00 45.49 3.91
3401 9929 7.119846 GCTAAATTCACAAGATAAGTGAGGTGT 59.880 37.037 0.00 0.00 45.72 4.16
3449 9977 9.624373 AAGATATATGTGCTTTCTGTGAGATTT 57.376 29.630 0.00 0.00 0.00 2.17
3475 10003 3.889538 ACCTATGTGCGCTAGTAATCAGA 59.110 43.478 9.73 0.00 0.00 3.27
3537 10065 3.419915 CGCAATGTCATCAAGCACTTAC 58.580 45.455 5.91 0.00 0.00 2.34
3540 10070 0.169672 GCGCAATGTCATCAAGCACT 59.830 50.000 0.30 0.00 0.00 4.40
3547 10077 1.197492 TCACAACAGCGCAATGTCATC 59.803 47.619 11.47 0.00 31.50 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.