Multiple sequence alignment - TraesCS6B01G315500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G315500 chr6B 100.000 4549 0 0 1 4549 563334272 563338820 0.000000e+00 8401.0
1 TraesCS6B01G315500 chr6B 97.319 373 10 0 4177 4549 563433325 563433697 6.420000e-178 634.0
2 TraesCS6B01G315500 chr6D 91.823 3461 148 45 251 3647 377331217 377334606 0.000000e+00 4698.0
3 TraesCS6B01G315500 chr6D 85.789 570 54 7 3631 4176 377334622 377335188 3.050000e-161 579.0
4 TraesCS6B01G315500 chr6A 88.763 3880 230 61 144 3965 518776973 518780704 0.000000e+00 4560.0
5 TraesCS6B01G315500 chr6A 92.157 51 2 2 3734 3783 506112083 506112034 2.270000e-08 71.3
6 TraesCS6B01G315500 chr6A 88.462 52 6 0 3732 3783 413729373 413729424 3.800000e-06 63.9
7 TraesCS6B01G315500 chr4B 98.123 373 7 0 4177 4549 274363069 274362697 0.000000e+00 651.0
8 TraesCS6B01G315500 chr4B 97.082 377 10 1 4174 4549 149741869 149742245 6.420000e-178 634.0
9 TraesCS6B01G315500 chr4B 97.319 373 10 0 4177 4549 457425947 457426319 6.420000e-178 634.0
10 TraesCS6B01G315500 chr7B 97.855 373 8 0 4177 4549 411739596 411739968 0.000000e+00 645.0
11 TraesCS6B01G315500 chr7B 97.587 373 9 0 4177 4549 477984343 477984715 1.380000e-179 640.0
12 TraesCS6B01G315500 chr7B 90.385 52 3 2 3733 3783 622611966 622612016 2.940000e-07 67.6
13 TraesCS6B01G315500 chr1B 97.855 373 8 0 4177 4549 272278771 272279143 0.000000e+00 645.0
14 TraesCS6B01G315500 chr1B 88.136 59 5 2 3733 3790 307010287 307010230 8.170000e-08 69.4
15 TraesCS6B01G315500 chr5B 97.587 373 8 1 4177 4549 70698167 70697796 4.960000e-179 638.0
16 TraesCS6B01G315500 chr3B 97.326 374 10 0 4176 4549 222333327 222333700 1.790000e-178 636.0
17 TraesCS6B01G315500 chr5D 85.714 112 12 3 3735 3843 390262342 390262232 1.030000e-21 115.0
18 TraesCS6B01G315500 chr4D 94.231 52 2 1 1 52 352137318 352137368 1.360000e-10 78.7
19 TraesCS6B01G315500 chr5A 95.745 47 2 0 1 47 687660470 687660516 4.880000e-10 76.8
20 TraesCS6B01G315500 chr5A 95.745 47 2 0 1 47 687666869 687666915 4.880000e-10 76.8
21 TraesCS6B01G315500 chr5A 90.385 52 4 1 1 52 563010065 563010115 2.940000e-07 67.6
22 TraesCS6B01G315500 chr5A 86.538 52 6 1 1 52 695755861 695755811 6.360000e-04 56.5
23 TraesCS6B01G315500 chr4A 95.556 45 2 0 1 45 688341026 688340982 6.310000e-09 73.1
24 TraesCS6B01G315500 chr4A 93.023 43 1 2 1 42 706849065 706849024 1.370000e-05 62.1
25 TraesCS6B01G315500 chr4A 88.235 51 4 2 3734 3783 688442192 688442241 4.910000e-05 60.2
26 TraesCS6B01G315500 chr2B 92.308 52 3 1 1 52 247871782 247871832 6.310000e-09 73.1
27 TraesCS6B01G315500 chr2B 92.157 51 4 0 3733 3783 685154227 685154277 6.310000e-09 73.1
28 TraesCS6B01G315500 chr2A 93.333 45 3 0 3742 3786 32929877 32929921 2.940000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G315500 chr6B 563334272 563338820 4548 False 8401.0 8401 100.000 1 4549 1 chr6B.!!$F1 4548
1 TraesCS6B01G315500 chr6D 377331217 377335188 3971 False 2638.5 4698 88.806 251 4176 2 chr6D.!!$F1 3925
2 TraesCS6B01G315500 chr6A 518776973 518780704 3731 False 4560.0 4560 88.763 144 3965 1 chr6A.!!$F2 3821

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
131 132 0.109723 AGGCCGCCTTTTGTTCACTA 59.890 50.0 5.94 0.0 0.00 2.74 F
605 623 0.476771 AAAACTCCTCCCGGAAAGCA 59.523 50.0 0.73 0.0 39.29 3.91 F
2035 2104 0.249953 TGCCGCCTTCGTTTACTTCA 60.250 50.0 0.00 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1252 1297 0.179062 CCTTGGCCTGGAGAATCTCG 60.179 60.0 3.32 0.0 33.73 4.04 R
2112 2184 0.533491 ACAGCGCAATCGGGTACTTA 59.467 50.0 11.47 0.0 35.95 2.24 R
4021 4172 0.108089 TTTAAGCATCTACGGCGGCA 60.108 50.0 13.24 0.0 36.08 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.418684 ACATCTGTACACCCTTGAACC 57.581 47.619 0.00 0.00 0.00 3.62
33 34 2.708861 ACATCTGTACACCCTTGAACCA 59.291 45.455 0.00 0.00 0.00 3.67
34 35 3.330701 ACATCTGTACACCCTTGAACCAT 59.669 43.478 0.00 0.00 0.00 3.55
35 36 4.534500 ACATCTGTACACCCTTGAACCATA 59.466 41.667 0.00 0.00 0.00 2.74
36 37 4.546829 TCTGTACACCCTTGAACCATAC 57.453 45.455 0.00 0.00 0.00 2.39
37 38 4.164981 TCTGTACACCCTTGAACCATACT 58.835 43.478 0.00 0.00 0.00 2.12
38 39 4.020573 TCTGTACACCCTTGAACCATACTG 60.021 45.833 0.00 0.00 0.00 2.74
39 40 3.904965 TGTACACCCTTGAACCATACTGA 59.095 43.478 0.00 0.00 0.00 3.41
40 41 4.348461 TGTACACCCTTGAACCATACTGAA 59.652 41.667 0.00 0.00 0.00 3.02
41 42 4.657814 ACACCCTTGAACCATACTGAAT 57.342 40.909 0.00 0.00 0.00 2.57
42 43 4.589908 ACACCCTTGAACCATACTGAATC 58.410 43.478 0.00 0.00 0.00 2.52
43 44 3.947834 CACCCTTGAACCATACTGAATCC 59.052 47.826 0.00 0.00 0.00 3.01
44 45 3.206150 CCCTTGAACCATACTGAATCCG 58.794 50.000 0.00 0.00 0.00 4.18
45 46 2.614057 CCTTGAACCATACTGAATCCGC 59.386 50.000 0.00 0.00 0.00 5.54
46 47 2.325583 TGAACCATACTGAATCCGCC 57.674 50.000 0.00 0.00 0.00 6.13
47 48 1.134220 TGAACCATACTGAATCCGCCC 60.134 52.381 0.00 0.00 0.00 6.13
48 49 0.916086 AACCATACTGAATCCGCCCA 59.084 50.000 0.00 0.00 0.00 5.36
49 50 0.180406 ACCATACTGAATCCGCCCAC 59.820 55.000 0.00 0.00 0.00 4.61
50 51 0.469917 CCATACTGAATCCGCCCACT 59.530 55.000 0.00 0.00 0.00 4.00
51 52 1.586422 CATACTGAATCCGCCCACTG 58.414 55.000 0.00 0.00 0.00 3.66
52 53 1.134401 CATACTGAATCCGCCCACTGT 60.134 52.381 0.00 0.00 0.00 3.55
53 54 0.981183 TACTGAATCCGCCCACTGTT 59.019 50.000 0.00 0.00 0.00 3.16
54 55 0.110486 ACTGAATCCGCCCACTGTTT 59.890 50.000 0.00 0.00 0.00 2.83
55 56 0.523072 CTGAATCCGCCCACTGTTTG 59.477 55.000 0.00 0.00 0.00 2.93
56 57 0.893270 TGAATCCGCCCACTGTTTGG 60.893 55.000 0.00 0.00 46.47 3.28
67 68 2.436417 CACTGTTTGGGTAGTGGATGG 58.564 52.381 0.00 0.00 40.38 3.51
68 69 1.354368 ACTGTTTGGGTAGTGGATGGG 59.646 52.381 0.00 0.00 0.00 4.00
69 70 0.701731 TGTTTGGGTAGTGGATGGGG 59.298 55.000 0.00 0.00 0.00 4.96
70 71 0.996583 GTTTGGGTAGTGGATGGGGA 59.003 55.000 0.00 0.00 0.00 4.81
71 72 0.996583 TTTGGGTAGTGGATGGGGAC 59.003 55.000 0.00 0.00 0.00 4.46
82 83 3.086143 TGGGGACAATGTCGGCAT 58.914 55.556 7.35 0.00 37.44 4.40
83 84 1.077787 TGGGGACAATGTCGGCATC 60.078 57.895 1.37 0.00 37.44 3.91
84 85 1.077787 GGGGACAATGTCGGCATCA 60.078 57.895 1.37 0.00 33.50 3.07
85 86 0.679640 GGGGACAATGTCGGCATCAA 60.680 55.000 1.37 0.00 33.50 2.57
86 87 0.734889 GGGACAATGTCGGCATCAAG 59.265 55.000 1.37 0.00 33.50 3.02
87 88 1.678728 GGGACAATGTCGGCATCAAGA 60.679 52.381 1.37 0.00 33.50 3.02
88 89 1.398390 GGACAATGTCGGCATCAAGAC 59.602 52.381 1.37 0.00 37.85 3.01
93 94 0.804364 TGTCGGCATCAAGACATTGC 59.196 50.000 0.00 0.00 41.81 3.56
94 95 0.804364 GTCGGCATCAAGACATTGCA 59.196 50.000 0.00 0.00 38.12 4.08
95 96 1.199789 GTCGGCATCAAGACATTGCAA 59.800 47.619 0.00 0.00 38.12 4.08
96 97 1.199789 TCGGCATCAAGACATTGCAAC 59.800 47.619 0.00 0.00 38.12 4.17
97 98 1.621107 GGCATCAAGACATTGCAACG 58.379 50.000 0.00 0.00 38.12 4.10
98 99 0.986992 GCATCAAGACATTGCAACGC 59.013 50.000 0.00 0.00 36.30 4.84
99 100 1.621107 CATCAAGACATTGCAACGCC 58.379 50.000 0.00 0.00 36.30 5.68
100 101 0.527565 ATCAAGACATTGCAACGCCC 59.472 50.000 0.00 0.00 36.30 6.13
101 102 0.537143 TCAAGACATTGCAACGCCCT 60.537 50.000 0.00 0.00 36.30 5.19
102 103 0.314935 CAAGACATTGCAACGCCCTT 59.685 50.000 0.00 0.00 0.00 3.95
103 104 1.539388 CAAGACATTGCAACGCCCTTA 59.461 47.619 0.00 0.00 0.00 2.69
104 105 1.453155 AGACATTGCAACGCCCTTAG 58.547 50.000 0.00 0.00 0.00 2.18
105 106 0.179163 GACATTGCAACGCCCTTAGC 60.179 55.000 0.00 0.00 38.52 3.09
106 107 1.139520 CATTGCAACGCCCTTAGCC 59.860 57.895 0.00 0.00 38.78 3.93
107 108 2.406616 ATTGCAACGCCCTTAGCCG 61.407 57.895 0.00 0.00 38.78 5.52
110 111 4.778143 CAACGCCCTTAGCCGCCT 62.778 66.667 0.00 0.00 38.78 5.52
111 112 4.468689 AACGCCCTTAGCCGCCTC 62.469 66.667 0.00 0.00 38.78 4.70
113 114 4.899239 CGCCCTTAGCCGCCTCAG 62.899 72.222 0.00 0.00 38.78 3.35
114 115 4.554036 GCCCTTAGCCGCCTCAGG 62.554 72.222 0.00 0.00 33.11 3.86
124 125 3.752339 GCCTCAGGCCGCCTTTTG 61.752 66.667 9.99 0.00 44.06 2.44
125 126 2.282462 CCTCAGGCCGCCTTTTGT 60.282 61.111 9.99 0.00 0.00 2.83
126 127 1.903404 CCTCAGGCCGCCTTTTGTT 60.903 57.895 9.99 0.00 0.00 2.83
127 128 1.581447 CTCAGGCCGCCTTTTGTTC 59.419 57.895 9.99 0.00 0.00 3.18
128 129 1.152860 TCAGGCCGCCTTTTGTTCA 60.153 52.632 9.99 0.00 0.00 3.18
129 130 1.007387 CAGGCCGCCTTTTGTTCAC 60.007 57.895 9.99 0.00 0.00 3.18
130 131 1.152756 AGGCCGCCTTTTGTTCACT 60.153 52.632 5.94 0.00 0.00 3.41
131 132 0.109723 AGGCCGCCTTTTGTTCACTA 59.890 50.000 5.94 0.00 0.00 2.74
132 133 1.173913 GGCCGCCTTTTGTTCACTAT 58.826 50.000 0.71 0.00 0.00 2.12
133 134 2.026636 AGGCCGCCTTTTGTTCACTATA 60.027 45.455 5.94 0.00 0.00 1.31
134 135 2.354821 GGCCGCCTTTTGTTCACTATAG 59.645 50.000 0.71 0.00 0.00 1.31
135 136 2.223272 GCCGCCTTTTGTTCACTATAGC 60.223 50.000 0.00 0.00 0.00 2.97
136 137 3.006940 CCGCCTTTTGTTCACTATAGCA 58.993 45.455 0.00 0.00 0.00 3.49
137 138 3.181510 CCGCCTTTTGTTCACTATAGCAC 60.182 47.826 0.00 0.00 0.00 4.40
138 139 3.684788 CGCCTTTTGTTCACTATAGCACT 59.315 43.478 0.00 0.00 0.00 4.40
139 140 4.868171 CGCCTTTTGTTCACTATAGCACTA 59.132 41.667 0.00 0.00 0.00 2.74
140 141 5.523916 CGCCTTTTGTTCACTATAGCACTAT 59.476 40.000 0.00 0.00 0.00 2.12
141 142 6.510157 CGCCTTTTGTTCACTATAGCACTATG 60.510 42.308 0.00 0.00 0.00 2.23
142 143 6.538742 GCCTTTTGTTCACTATAGCACTATGA 59.461 38.462 0.00 0.00 0.00 2.15
154 155 1.331756 GCACTATGAATTGGGCTCACG 59.668 52.381 0.00 0.00 0.00 4.35
156 157 0.583438 CTATGAATTGGGCTCACGCG 59.417 55.000 3.53 3.53 36.88 6.01
192 194 3.325753 GTGCCTGGGCCTGTCTCT 61.326 66.667 4.53 0.00 41.09 3.10
193 195 3.324930 TGCCTGGGCCTGTCTCTG 61.325 66.667 4.53 0.00 41.09 3.35
207 209 3.068064 TCTGCCGCTGGATGACGA 61.068 61.111 0.00 0.00 0.00 4.20
209 211 2.202919 TGCCGCTGGATGACGATG 60.203 61.111 0.00 0.00 0.00 3.84
212 214 1.153369 CCGCTGGATGACGATGGTT 60.153 57.895 0.00 0.00 0.00 3.67
217 223 2.698803 CTGGATGACGATGGTTGTTCA 58.301 47.619 0.00 0.00 0.00 3.18
218 224 3.073678 CTGGATGACGATGGTTGTTCAA 58.926 45.455 0.00 0.00 0.00 2.69
228 234 3.304911 TGGTTGTTCAATGGTCCAAGA 57.695 42.857 0.00 0.00 0.00 3.02
230 236 4.222336 TGGTTGTTCAATGGTCCAAGAAT 58.778 39.130 11.87 0.00 0.00 2.40
231 237 4.653341 TGGTTGTTCAATGGTCCAAGAATT 59.347 37.500 11.87 0.00 0.00 2.17
232 238 5.221422 TGGTTGTTCAATGGTCCAAGAATTC 60.221 40.000 11.87 0.00 0.00 2.17
234 240 5.710513 TGTTCAATGGTCCAAGAATTCTG 57.289 39.130 9.17 3.45 0.00 3.02
239 245 4.927267 ATGGTCCAAGAATTCTGGTGTA 57.073 40.909 9.17 4.55 0.00 2.90
267 273 6.621316 TTTTACGTCAAGGATGCTTTGTAA 57.379 33.333 0.00 4.61 0.00 2.41
270 276 5.705609 ACGTCAAGGATGCTTTGTAATTT 57.294 34.783 0.00 0.00 0.00 1.82
493 510 4.944317 GTCTCTCCCCTCAAAAGGTTAATG 59.056 45.833 0.00 0.00 41.59 1.90
505 522 5.694231 AAAGGTTAATGTCCGGTACAAAC 57.306 39.130 0.00 7.12 42.70 2.93
513 530 5.952526 ATGTCCGGTACAAACTTAAAAGG 57.047 39.130 0.00 0.00 42.70 3.11
514 531 5.033589 TGTCCGGTACAAACTTAAAAGGA 57.966 39.130 0.00 0.00 34.29 3.36
516 533 5.884792 TGTCCGGTACAAACTTAAAAGGAAA 59.115 36.000 0.00 0.00 34.29 3.13
517 534 6.038492 TGTCCGGTACAAACTTAAAAGGAAAG 59.962 38.462 0.00 0.00 34.29 2.62
518 535 5.008911 TCCGGTACAAACTTAAAAGGAAAGC 59.991 40.000 0.00 0.00 0.00 3.51
519 536 5.217393 CGGTACAAACTTAAAAGGAAAGCC 58.783 41.667 0.00 0.00 0.00 4.35
559 576 2.279784 GCTCCGGCGATCTTCCAG 60.280 66.667 9.30 0.00 0.00 3.86
592 610 2.616842 TCTGAAACGAGCCCAAAAACTC 59.383 45.455 0.00 0.00 0.00 3.01
605 623 0.476771 AAAACTCCTCCCGGAAAGCA 59.523 50.000 0.73 0.00 39.29 3.91
645 663 0.831966 AACCAACCACCTCACGTACA 59.168 50.000 0.00 0.00 0.00 2.90
1170 1207 1.961180 CTCTTCCTCCGCCGGTCAAT 61.961 60.000 1.63 0.00 0.00 2.57
1171 1208 1.521681 CTTCCTCCGCCGGTCAATC 60.522 63.158 1.63 0.00 0.00 2.67
1172 1209 2.925162 CTTCCTCCGCCGGTCAATCC 62.925 65.000 1.63 0.00 0.00 3.01
1173 1210 3.470888 CCTCCGCCGGTCAATCCT 61.471 66.667 1.63 0.00 0.00 3.24
1174 1211 2.107141 CTCCGCCGGTCAATCCTC 59.893 66.667 1.63 0.00 0.00 3.71
1252 1297 1.070758 TGGTCCAGAAGTCAAGTCAGC 59.929 52.381 0.00 0.00 0.00 4.26
1268 1313 1.687146 AGCGAGATTCTCCAGGCCA 60.687 57.895 5.01 0.00 0.00 5.36
1481 1527 0.663153 GCCAAAGTGTGACGCTTTCT 59.337 50.000 20.11 0.00 41.42 2.52
1499 1545 3.261981 TCTTTATCCCCTTCTTCACGC 57.738 47.619 0.00 0.00 0.00 5.34
1516 1562 4.832248 TCACGCACCTCTGAAATCTTTAT 58.168 39.130 0.00 0.00 0.00 1.40
1579 1625 1.369091 CGTGGTGCCATTACTCTGCC 61.369 60.000 0.00 0.00 0.00 4.85
1580 1626 1.032114 GTGGTGCCATTACTCTGCCC 61.032 60.000 0.00 0.00 0.00 5.36
1646 1711 1.461897 GTTCCACAACGTACGGAATGG 59.538 52.381 21.06 21.26 40.76 3.16
1718 1783 0.835276 ATCTGCACATGCTCCTGCTA 59.165 50.000 5.31 0.00 42.66 3.49
1724 1789 0.539051 ACATGCTCCTGCTACACTCC 59.461 55.000 0.00 0.00 40.48 3.85
1742 1807 4.339530 CACTCCATCTCTCACGAAATCCTA 59.660 45.833 0.00 0.00 0.00 2.94
1788 1853 5.660460 GTGTGAAAAACCTGATCCAGTTTT 58.340 37.500 14.11 14.11 31.49 2.43
1789 1854 6.106003 GTGTGAAAAACCTGATCCAGTTTTT 58.894 36.000 24.49 24.49 37.61 1.94
1791 1856 7.222031 GTGTGAAAAACCTGATCCAGTTTTTAC 59.778 37.037 24.38 21.56 35.59 2.01
1792 1857 6.416750 GTGAAAAACCTGATCCAGTTTTTACG 59.583 38.462 24.38 0.00 35.59 3.18
1793 1858 4.499037 AAACCTGATCCAGTTTTTACGC 57.501 40.909 4.76 0.00 0.00 4.42
1808 1873 2.684001 TACGCCCACTGACTTAATGG 57.316 50.000 0.00 0.00 0.00 3.16
1886 1955 4.919653 GAGATGCACAGCTCGGAA 57.080 55.556 0.00 0.00 33.93 4.30
1895 1964 3.256960 AGCTCGGAAGGGGCCAAA 61.257 61.111 4.39 0.00 0.00 3.28
2029 2098 2.210116 CTACATATGCCGCCTTCGTTT 58.790 47.619 1.58 0.00 0.00 3.60
2031 2100 1.937899 ACATATGCCGCCTTCGTTTAC 59.062 47.619 1.58 0.00 0.00 2.01
2032 2101 2.210116 CATATGCCGCCTTCGTTTACT 58.790 47.619 0.00 0.00 0.00 2.24
2035 2104 0.249953 TGCCGCCTTCGTTTACTTCA 60.250 50.000 0.00 0.00 0.00 3.02
2036 2105 1.084289 GCCGCCTTCGTTTACTTCAT 58.916 50.000 0.00 0.00 0.00 2.57
2037 2106 1.202031 GCCGCCTTCGTTTACTTCATG 60.202 52.381 0.00 0.00 0.00 3.07
2038 2107 2.073816 CCGCCTTCGTTTACTTCATGT 58.926 47.619 0.00 0.00 0.00 3.21
2039 2108 3.255725 CCGCCTTCGTTTACTTCATGTA 58.744 45.455 0.00 0.00 0.00 2.29
2040 2109 3.061697 CCGCCTTCGTTTACTTCATGTAC 59.938 47.826 0.00 0.00 0.00 2.90
2068 2137 9.431887 ACGAGTTAGTAGCAAGATTTCATTTAA 57.568 29.630 0.00 0.00 0.00 1.52
2112 2184 1.131303 TGATGGGGAGTGTCGGGTTT 61.131 55.000 0.00 0.00 0.00 3.27
2133 2205 1.447140 GTACCCGATTGCGCTGTCA 60.447 57.895 9.73 0.00 35.83 3.58
2151 2223 0.802222 CACTGATCCACTACGCGGTG 60.802 60.000 12.47 10.02 37.00 4.94
2181 2253 1.895707 CATGGCGATCCTCAAGGCC 60.896 63.158 0.00 0.00 45.76 5.19
2319 2391 6.373495 ACAATAGGTAAACCGGATTCTGTTTC 59.627 38.462 9.46 0.00 42.08 2.78
2320 2392 3.682696 AGGTAAACCGGATTCTGTTTCC 58.317 45.455 9.46 1.19 42.08 3.13
2322 2394 4.014406 GGTAAACCGGATTCTGTTTCCAT 58.986 43.478 9.46 0.00 36.23 3.41
2326 2398 6.850752 AAACCGGATTCTGTTTCCATTTAT 57.149 33.333 9.46 0.00 32.45 1.40
2327 2399 5.835113 ACCGGATTCTGTTTCCATTTATG 57.165 39.130 9.46 0.00 32.45 1.90
2347 2421 7.686438 TTATGTATGTTCAGTGATGTTGCTT 57.314 32.000 0.00 0.00 0.00 3.91
2348 2422 6.579666 ATGTATGTTCAGTGATGTTGCTTT 57.420 33.333 0.00 0.00 0.00 3.51
2365 2440 6.371548 TGTTGCTTTATGTGTTCTCAGTATCC 59.628 38.462 0.00 0.00 0.00 2.59
2370 2445 4.833478 ATGTGTTCTCAGTATCCTTGCT 57.167 40.909 0.00 0.00 0.00 3.91
2419 2494 1.080093 GATTGCCGTGACTCCGACA 60.080 57.895 0.00 0.00 0.00 4.35
2464 2539 5.692204 GCTTTTTAAGAAGAAGGTTTCCTGC 59.308 40.000 9.82 0.00 32.13 4.85
2509 2584 1.660167 TACTGATGAGCTGCACATGC 58.340 50.000 17.16 9.31 42.50 4.06
2536 2611 6.417191 TTCTGTACTTTGAACACAACTGTC 57.583 37.500 0.00 0.00 0.00 3.51
2537 2612 4.873827 TCTGTACTTTGAACACAACTGTCC 59.126 41.667 0.00 0.00 0.00 4.02
2661 2736 5.212194 GTTTGTTTGTTGTCGATAGTGCAT 58.788 37.500 0.00 0.00 37.40 3.96
2666 2741 5.585820 TTGTTGTCGATAGTGCATACCTA 57.414 39.130 0.00 0.00 37.40 3.08
2696 2775 9.255304 TGCTGTCAAATTTATTCAGTTTTAACC 57.745 29.630 13.84 2.31 0.00 2.85
2726 2805 4.320494 CCTGCTTCAACATTTACACAGGTC 60.320 45.833 0.00 0.00 38.87 3.85
2735 2814 6.109156 ACATTTACACAGGTCATCACACTA 57.891 37.500 0.00 0.00 0.00 2.74
2741 2820 2.634940 ACAGGTCATCACACTAGCAACT 59.365 45.455 0.00 0.00 0.00 3.16
2867 2946 0.250252 TGTGGTCGAATCTGCAGCAA 60.250 50.000 9.47 0.00 0.00 3.91
2960 3039 6.361214 CGCATTGTTTTTCGGTTAAGTAACAT 59.639 34.615 3.75 0.00 37.92 2.71
2961 3040 7.534578 CGCATTGTTTTTCGGTTAAGTAACATA 59.465 33.333 3.75 0.00 37.92 2.29
2962 3041 9.182933 GCATTGTTTTTCGGTTAAGTAACATAA 57.817 29.630 3.75 0.00 37.92 1.90
3051 3130 0.030807 TGATGCCTCTCCTGGATCCA 60.031 55.000 15.27 15.27 0.00 3.41
3072 3151 1.980772 GGGCCTGCTGCTGTTCAAT 60.981 57.895 0.84 0.00 40.92 2.57
3087 3166 7.218614 TGCTGTTCAATTGGAATTTCAGAAAT 58.781 30.769 5.42 2.20 37.93 2.17
3090 3169 9.918630 CTGTTCAATTGGAATTTCAGAAATAGT 57.081 29.630 8.88 0.00 37.93 2.12
3166 3245 1.384191 GCCCTTGGGTGAGACCATT 59.616 57.895 7.61 0.00 41.02 3.16
3167 3246 0.251787 GCCCTTGGGTGAGACCATTT 60.252 55.000 7.61 0.00 41.02 2.32
3174 3253 2.716424 TGGGTGAGACCATTTTTCCTCT 59.284 45.455 0.00 0.00 41.02 3.69
3175 3254 3.244911 TGGGTGAGACCATTTTTCCTCTC 60.245 47.826 0.00 0.00 41.02 3.20
3176 3255 3.009584 GGGTGAGACCATTTTTCCTCTCT 59.990 47.826 0.00 0.00 41.02 3.10
3181 3260 7.162082 GTGAGACCATTTTTCCTCTCTTCTTA 58.838 38.462 0.00 0.00 31.99 2.10
3220 3302 6.780031 TCCTTGTGAGATTTCAAAATGGGTAA 59.220 34.615 0.00 0.00 34.49 2.85
3425 3509 0.108138 GCGGCATGTCCTTCTACACT 60.108 55.000 0.00 0.00 30.75 3.55
3485 3569 4.208686 AAGCCGCCGTCGAGATCC 62.209 66.667 0.00 0.00 38.10 3.36
3495 3579 1.472878 CGTCGAGATCCAACTCCTTCA 59.527 52.381 0.00 0.00 33.83 3.02
3676 3806 9.600432 TTCCTATATTATTCCTTTTCCCATTGG 57.400 33.333 0.00 0.00 0.00 3.16
3683 3813 1.341080 CTTTTCCCATTGGCAGGTGT 58.659 50.000 0.00 0.00 0.00 4.16
3725 3855 9.699703 ACACTTAAAAACTTCTTAGTGCAAAAA 57.300 25.926 0.00 0.00 34.01 1.94
3830 3981 1.399714 AATACTCCTCGGCATCACGA 58.600 50.000 0.00 0.00 41.13 4.35
3844 3995 4.452455 GGCATCACGAACTCCTATATTTGG 59.548 45.833 0.00 0.00 0.00 3.28
3851 4002 4.202264 CGAACTCCTATATTTGGTCAGCCT 60.202 45.833 0.00 0.00 35.27 4.58
3859 4010 4.590553 TGGTCAGCCTCCCACCCA 62.591 66.667 0.00 0.00 35.27 4.51
3894 4045 3.917760 CCATCTCCCCTCGGTCGC 61.918 72.222 0.00 0.00 0.00 5.19
3921 4072 0.107214 CCACCCCGTGTTGCATCTAT 60.107 55.000 0.00 0.00 0.00 1.98
3922 4073 1.299541 CACCCCGTGTTGCATCTATC 58.700 55.000 0.00 0.00 0.00 2.08
3927 4078 0.179084 CGTGTTGCATCTATCCCGGT 60.179 55.000 0.00 0.00 0.00 5.28
3957 4108 2.506438 GCCTACGTCGCTCACCAC 60.506 66.667 0.00 0.00 0.00 4.16
3971 4122 1.896660 ACCACGCGCCACTTTTGAT 60.897 52.632 5.73 0.00 0.00 2.57
3975 4126 1.298859 ACGCGCCACTTTTGATCCTC 61.299 55.000 5.73 0.00 0.00 3.71
4021 4172 2.059756 TCCCAATTTGGTCCTCTCCT 57.940 50.000 14.26 0.00 35.17 3.69
4030 4181 4.435970 TCCTCTCCTGCCGCCGTA 62.436 66.667 0.00 0.00 0.00 4.02
4043 4194 2.479837 CCGCCGTAGATGCTTAAATCA 58.520 47.619 0.00 0.00 0.00 2.57
4059 4210 6.127619 GCTTAAATCAACAGATATATGGCCCC 60.128 42.308 0.00 0.00 0.00 5.80
4099 4250 1.153449 CGCAGCCCGACCTTTGATA 60.153 57.895 0.00 0.00 40.02 2.15
4100 4251 0.532862 CGCAGCCCGACCTTTGATAT 60.533 55.000 0.00 0.00 40.02 1.63
4124 4275 2.739913 TCGTGTTTTGGATGGATTCGTC 59.260 45.455 0.00 0.00 0.00 4.20
4129 4280 1.268992 TTGGATGGATTCGTCGGGGT 61.269 55.000 0.00 0.00 0.00 4.95
4157 4308 1.152546 GCAACCCCCTCAACCACTT 60.153 57.895 0.00 0.00 0.00 3.16
4161 4312 2.268076 CCCCCTCAACCACTTTGCG 61.268 63.158 0.00 0.00 34.88 4.85
4164 4315 2.192861 CCTCAACCACTTTGCGCCA 61.193 57.895 4.18 0.00 34.88 5.69
4176 4327 0.107897 TTGCGCCACATCTCGGTATT 60.108 50.000 4.18 0.00 0.00 1.89
4177 4328 0.809636 TGCGCCACATCTCGGTATTG 60.810 55.000 4.18 0.00 0.00 1.90
4178 4329 0.529773 GCGCCACATCTCGGTATTGA 60.530 55.000 0.00 0.00 0.00 2.57
4179 4330 1.934589 CGCCACATCTCGGTATTGAA 58.065 50.000 0.00 0.00 0.00 2.69
4180 4331 1.860950 CGCCACATCTCGGTATTGAAG 59.139 52.381 0.00 0.00 0.00 3.02
4181 4332 2.213499 GCCACATCTCGGTATTGAAGG 58.787 52.381 0.00 0.00 0.00 3.46
4182 4333 2.158957 GCCACATCTCGGTATTGAAGGA 60.159 50.000 0.00 0.00 0.00 3.36
4183 4334 3.681594 GCCACATCTCGGTATTGAAGGAA 60.682 47.826 0.00 0.00 0.00 3.36
4184 4335 4.513442 CCACATCTCGGTATTGAAGGAAA 58.487 43.478 0.00 0.00 0.00 3.13
4185 4336 5.126067 CCACATCTCGGTATTGAAGGAAAT 58.874 41.667 0.00 0.00 0.00 2.17
4186 4337 6.288294 CCACATCTCGGTATTGAAGGAAATA 58.712 40.000 0.00 0.00 0.00 1.40
4187 4338 6.936900 CCACATCTCGGTATTGAAGGAAATAT 59.063 38.462 0.00 0.00 0.00 1.28
4188 4339 7.095060 CCACATCTCGGTATTGAAGGAAATATG 60.095 40.741 0.00 0.00 0.00 1.78
4189 4340 6.428159 ACATCTCGGTATTGAAGGAAATATGC 59.572 38.462 0.00 0.00 0.00 3.14
4190 4341 5.305585 TCTCGGTATTGAAGGAAATATGCC 58.694 41.667 0.00 0.00 0.00 4.40
4191 4342 4.394729 TCGGTATTGAAGGAAATATGCCC 58.605 43.478 0.00 0.00 0.00 5.36
4192 4343 4.104102 TCGGTATTGAAGGAAATATGCCCT 59.896 41.667 0.00 0.00 0.00 5.19
4193 4344 5.308497 TCGGTATTGAAGGAAATATGCCCTA 59.692 40.000 0.00 0.00 31.36 3.53
4194 4345 5.643777 CGGTATTGAAGGAAATATGCCCTAG 59.356 44.000 0.00 0.00 31.36 3.02
4195 4346 6.520061 CGGTATTGAAGGAAATATGCCCTAGA 60.520 42.308 0.00 0.00 31.36 2.43
4196 4347 6.881602 GGTATTGAAGGAAATATGCCCTAGAG 59.118 42.308 0.00 0.00 31.36 2.43
4197 4348 4.982241 TGAAGGAAATATGCCCTAGAGG 57.018 45.455 0.00 0.00 39.47 3.69
4272 4423 7.490962 TTCATGCTAGAATTGTATTAACCGG 57.509 36.000 0.00 0.00 0.00 5.28
4273 4424 6.822442 TCATGCTAGAATTGTATTAACCGGA 58.178 36.000 9.46 0.00 0.00 5.14
4274 4425 7.276658 TCATGCTAGAATTGTATTAACCGGAA 58.723 34.615 9.46 0.00 0.00 4.30
4275 4426 7.771361 TCATGCTAGAATTGTATTAACCGGAAA 59.229 33.333 9.46 1.61 0.00 3.13
4276 4427 7.311364 TGCTAGAATTGTATTAACCGGAAAC 57.689 36.000 9.46 0.00 0.00 2.78
4277 4428 7.107542 TGCTAGAATTGTATTAACCGGAAACT 58.892 34.615 9.46 0.00 0.00 2.66
4278 4429 7.608761 TGCTAGAATTGTATTAACCGGAAACTT 59.391 33.333 9.46 0.00 0.00 2.66
4279 4430 9.101655 GCTAGAATTGTATTAACCGGAAACTTA 57.898 33.333 9.46 0.00 0.00 2.24
4284 4435 9.723601 AATTGTATTAACCGGAAACTTAGTACA 57.276 29.630 9.46 10.88 28.23 2.90
4285 4436 9.895138 ATTGTATTAACCGGAAACTTAGTACAT 57.105 29.630 9.46 2.28 29.53 2.29
4286 4437 8.706492 TGTATTAACCGGAAACTTAGTACATG 57.294 34.615 9.46 0.00 0.00 3.21
4287 4438 8.313292 TGTATTAACCGGAAACTTAGTACATGT 58.687 33.333 9.46 2.69 0.00 3.21
4288 4439 7.605410 ATTAACCGGAAACTTAGTACATGTG 57.395 36.000 9.46 0.00 0.00 3.21
4289 4440 4.612264 ACCGGAAACTTAGTACATGTGT 57.388 40.909 9.46 0.00 0.00 3.72
4290 4441 4.312443 ACCGGAAACTTAGTACATGTGTG 58.688 43.478 9.46 0.00 0.00 3.82
4291 4442 4.039488 ACCGGAAACTTAGTACATGTGTGA 59.961 41.667 9.46 0.00 0.00 3.58
4292 4443 4.992319 CCGGAAACTTAGTACATGTGTGAA 59.008 41.667 9.11 0.00 0.00 3.18
4293 4444 5.642063 CCGGAAACTTAGTACATGTGTGAAT 59.358 40.000 9.11 0.00 0.00 2.57
4294 4445 6.814644 CCGGAAACTTAGTACATGTGTGAATA 59.185 38.462 9.11 0.00 0.00 1.75
4295 4446 7.201496 CCGGAAACTTAGTACATGTGTGAATAC 60.201 40.741 9.11 0.00 0.00 1.89
4296 4447 7.329962 CGGAAACTTAGTACATGTGTGAATACA 59.670 37.037 9.11 0.00 34.63 2.29
4297 4448 9.162764 GGAAACTTAGTACATGTGTGAATACAT 57.837 33.333 9.11 0.00 41.77 2.29
4305 4456 9.719355 AGTACATGTGTGAATACATAGACAAAA 57.281 29.630 9.11 0.00 39.17 2.44
4325 4476 9.819267 GACAAAATATATAGTCCCTAGTATGCC 57.181 37.037 0.00 0.00 0.00 4.40
4326 4477 9.562226 ACAAAATATATAGTCCCTAGTATGCCT 57.438 33.333 0.00 0.00 0.00 4.75
4331 4482 7.774694 ATATAGTCCCTAGTATGCCTCTACT 57.225 40.000 0.00 0.00 36.04 2.57
4332 4483 4.817874 AGTCCCTAGTATGCCTCTACTT 57.182 45.455 0.00 0.00 33.96 2.24
4333 4484 4.475345 AGTCCCTAGTATGCCTCTACTTG 58.525 47.826 0.00 0.00 33.96 3.16
4334 4485 4.168283 AGTCCCTAGTATGCCTCTACTTGA 59.832 45.833 0.00 0.00 33.96 3.02
4335 4486 4.278919 GTCCCTAGTATGCCTCTACTTGAC 59.721 50.000 0.00 0.00 33.96 3.18
4336 4487 4.168283 TCCCTAGTATGCCTCTACTTGACT 59.832 45.833 0.00 0.00 33.96 3.41
4337 4488 5.371769 TCCCTAGTATGCCTCTACTTGACTA 59.628 44.000 0.00 0.00 33.96 2.59
4338 4489 5.708230 CCCTAGTATGCCTCTACTTGACTAG 59.292 48.000 0.00 0.00 36.32 2.57
4339 4490 5.182380 CCTAGTATGCCTCTACTTGACTAGC 59.818 48.000 0.00 0.00 35.60 3.42
4340 4491 4.798882 AGTATGCCTCTACTTGACTAGCT 58.201 43.478 0.00 0.00 0.00 3.32
4341 4492 4.825085 AGTATGCCTCTACTTGACTAGCTC 59.175 45.833 0.00 0.00 0.00 4.09
4342 4493 2.017782 TGCCTCTACTTGACTAGCTCG 58.982 52.381 0.00 0.00 0.00 5.03
4343 4494 2.018515 GCCTCTACTTGACTAGCTCGT 58.981 52.381 0.00 0.00 0.00 4.18
4344 4495 2.424246 GCCTCTACTTGACTAGCTCGTT 59.576 50.000 0.00 0.00 0.00 3.85
4345 4496 3.626670 GCCTCTACTTGACTAGCTCGTTA 59.373 47.826 0.00 0.00 0.00 3.18
4346 4497 4.096081 GCCTCTACTTGACTAGCTCGTTAA 59.904 45.833 0.00 0.00 0.00 2.01
4347 4498 5.221087 GCCTCTACTTGACTAGCTCGTTAAT 60.221 44.000 0.00 0.00 0.00 1.40
4348 4499 6.432107 CCTCTACTTGACTAGCTCGTTAATC 58.568 44.000 0.00 0.00 0.00 1.75
4349 4500 6.038382 CCTCTACTTGACTAGCTCGTTAATCA 59.962 42.308 0.00 0.00 0.00 2.57
4350 4501 7.387119 TCTACTTGACTAGCTCGTTAATCAA 57.613 36.000 0.00 0.00 0.00 2.57
4351 4502 7.823665 TCTACTTGACTAGCTCGTTAATCAAA 58.176 34.615 0.00 0.00 0.00 2.69
4352 4503 6.952935 ACTTGACTAGCTCGTTAATCAAAG 57.047 37.500 0.00 0.00 0.00 2.77
4353 4504 6.688578 ACTTGACTAGCTCGTTAATCAAAGA 58.311 36.000 0.00 0.00 0.00 2.52
4354 4505 7.324178 ACTTGACTAGCTCGTTAATCAAAGAT 58.676 34.615 0.00 0.00 0.00 2.40
4355 4506 7.276658 ACTTGACTAGCTCGTTAATCAAAGATG 59.723 37.037 0.00 0.00 0.00 2.90
4356 4507 6.042777 TGACTAGCTCGTTAATCAAAGATGG 58.957 40.000 0.00 0.00 0.00 3.51
4357 4508 5.978814 ACTAGCTCGTTAATCAAAGATGGT 58.021 37.500 0.00 0.00 0.00 3.55
4358 4509 6.407202 ACTAGCTCGTTAATCAAAGATGGTT 58.593 36.000 0.00 0.00 33.49 3.67
4359 4510 7.553334 ACTAGCTCGTTAATCAAAGATGGTTA 58.447 34.615 0.00 0.00 30.84 2.85
4360 4511 8.204836 ACTAGCTCGTTAATCAAAGATGGTTAT 58.795 33.333 0.00 0.00 32.32 1.89
4361 4512 7.251704 AGCTCGTTAATCAAAGATGGTTATG 57.748 36.000 0.00 0.00 32.32 1.90
4362 4513 6.823689 AGCTCGTTAATCAAAGATGGTTATGT 59.176 34.615 0.00 0.00 32.32 2.29
4363 4514 7.336931 AGCTCGTTAATCAAAGATGGTTATGTT 59.663 33.333 0.00 0.00 32.32 2.71
4364 4515 7.968405 GCTCGTTAATCAAAGATGGTTATGTTT 59.032 33.333 0.00 0.00 32.32 2.83
4365 4516 9.490663 CTCGTTAATCAAAGATGGTTATGTTTC 57.509 33.333 0.00 0.00 32.32 2.78
4366 4517 8.455682 TCGTTAATCAAAGATGGTTATGTTTCC 58.544 33.333 0.00 0.00 32.32 3.13
4367 4518 8.458843 CGTTAATCAAAGATGGTTATGTTTCCT 58.541 33.333 0.00 0.00 32.32 3.36
4371 4522 7.696992 TCAAAGATGGTTATGTTTCCTAACC 57.303 36.000 5.49 5.49 45.53 2.85
4380 4531 8.154649 GGTTATGTTTCCTAACCATAGACATG 57.845 38.462 7.24 0.00 44.95 3.21
4381 4532 7.773690 GGTTATGTTTCCTAACCATAGACATGT 59.226 37.037 0.00 0.00 44.95 3.21
4382 4533 8.612619 GTTATGTTTCCTAACCATAGACATGTG 58.387 37.037 1.15 0.00 30.80 3.21
4383 4534 6.121776 TGTTTCCTAACCATAGACATGTGT 57.878 37.500 1.15 0.22 33.15 3.72
4384 4535 6.539173 TGTTTCCTAACCATAGACATGTGTT 58.461 36.000 1.15 3.14 33.15 3.32
4385 4536 6.429692 TGTTTCCTAACCATAGACATGTGTTG 59.570 38.462 1.15 0.54 33.15 3.33
4386 4537 5.755409 TCCTAACCATAGACATGTGTTGT 57.245 39.130 1.15 0.00 42.79 3.32
4399 4550 5.214417 ACATGTGTTGTCATTTGATGAACG 58.786 37.500 0.00 0.00 41.69 3.95
4400 4551 5.008514 ACATGTGTTGTCATTTGATGAACGA 59.991 36.000 0.00 0.00 41.69 3.85
4401 4552 5.094429 TGTGTTGTCATTTGATGAACGAG 57.906 39.130 0.00 0.00 41.69 4.18
4402 4553 4.813697 TGTGTTGTCATTTGATGAACGAGA 59.186 37.500 0.00 0.00 41.69 4.04
4403 4554 5.469760 TGTGTTGTCATTTGATGAACGAGAT 59.530 36.000 0.00 0.00 41.69 2.75
4404 4555 6.017933 GTGTTGTCATTTGATGAACGAGATC 58.982 40.000 0.00 0.00 41.69 2.75
4405 4556 5.700373 TGTTGTCATTTGATGAACGAGATCA 59.300 36.000 0.00 0.00 41.69 2.92
4406 4557 5.784750 TGTCATTTGATGAACGAGATCAC 57.215 39.130 0.00 0.00 41.69 3.06
4407 4558 5.237048 TGTCATTTGATGAACGAGATCACA 58.763 37.500 0.00 0.00 41.69 3.58
4408 4559 5.876460 TGTCATTTGATGAACGAGATCACAT 59.124 36.000 0.00 0.00 41.69 3.21
4409 4560 6.036408 TGTCATTTGATGAACGAGATCACATC 59.964 38.462 0.00 0.00 41.69 3.06
4410 4561 6.036408 GTCATTTGATGAACGAGATCACATCA 59.964 38.462 0.00 0.00 44.40 3.07
4411 4562 6.764560 TCATTTGATGAACGAGATCACATCAT 59.235 34.615 0.00 11.72 45.05 2.45
4412 4563 6.990341 TTTGATGAACGAGATCACATCATT 57.010 33.333 0.00 0.00 45.05 2.57
4413 4564 8.553696 CATTTGATGAACGAGATCACATCATTA 58.446 33.333 0.00 7.75 45.05 1.90
4414 4565 7.704789 TTGATGAACGAGATCACATCATTAG 57.295 36.000 0.00 0.00 45.05 1.73
4415 4566 6.218746 TGATGAACGAGATCACATCATTAGG 58.781 40.000 0.00 0.00 42.31 2.69
4416 4567 5.852282 TGAACGAGATCACATCATTAGGA 57.148 39.130 0.00 0.00 0.00 2.94
4417 4568 5.836347 TGAACGAGATCACATCATTAGGAG 58.164 41.667 0.00 0.00 0.00 3.69
4418 4569 5.594317 TGAACGAGATCACATCATTAGGAGA 59.406 40.000 0.00 0.00 0.00 3.71
4419 4570 6.096846 TGAACGAGATCACATCATTAGGAGAA 59.903 38.462 0.00 0.00 0.00 2.87
4420 4571 6.662865 ACGAGATCACATCATTAGGAGAAT 57.337 37.500 0.00 0.00 0.00 2.40
4421 4572 6.453943 ACGAGATCACATCATTAGGAGAATG 58.546 40.000 0.00 0.00 0.00 2.67
4422 4573 6.266330 ACGAGATCACATCATTAGGAGAATGA 59.734 38.462 2.66 2.66 40.50 2.57
4423 4574 7.039152 ACGAGATCACATCATTAGGAGAATGAT 60.039 37.037 6.90 6.90 45.40 2.45
4431 4582 6.752285 TCATTAGGAGAATGATGTGATGGA 57.248 37.500 0.00 0.00 32.21 3.41
4432 4583 6.528321 TCATTAGGAGAATGATGTGATGGAC 58.472 40.000 0.00 0.00 32.21 4.02
4433 4584 5.955961 TTAGGAGAATGATGTGATGGACA 57.044 39.130 0.00 0.00 39.53 4.02
4435 4586 4.715713 AGGAGAATGATGTGATGGACATG 58.284 43.478 0.00 0.00 45.90 3.21
4436 4587 4.411212 AGGAGAATGATGTGATGGACATGA 59.589 41.667 0.00 0.00 45.90 3.07
4437 4588 4.514441 GGAGAATGATGTGATGGACATGAC 59.486 45.833 0.00 0.00 45.90 3.06
4438 4589 4.458397 AGAATGATGTGATGGACATGACC 58.542 43.478 7.32 7.32 45.90 4.02
4439 4590 2.715749 TGATGTGATGGACATGACCC 57.284 50.000 11.80 6.84 45.90 4.46
4440 4591 1.914798 TGATGTGATGGACATGACCCA 59.085 47.619 11.80 12.22 45.90 4.51
4441 4592 2.510800 TGATGTGATGGACATGACCCAT 59.489 45.455 19.29 19.29 45.90 4.00
4445 4596 2.620234 ATGGACATGACCCATCCGT 58.380 52.632 11.80 0.00 40.16 4.69
4446 4597 0.918983 ATGGACATGACCCATCCGTT 59.081 50.000 11.80 0.00 40.16 4.44
4447 4598 1.574263 TGGACATGACCCATCCGTTA 58.426 50.000 11.80 0.00 35.06 3.18
4448 4599 1.484653 TGGACATGACCCATCCGTTAG 59.515 52.381 11.80 0.00 35.06 2.34
4449 4600 1.583054 GACATGACCCATCCGTTAGC 58.417 55.000 0.00 0.00 0.00 3.09
4450 4601 1.139058 GACATGACCCATCCGTTAGCT 59.861 52.381 0.00 0.00 0.00 3.32
4451 4602 1.559682 ACATGACCCATCCGTTAGCTT 59.440 47.619 0.00 0.00 0.00 3.74
4452 4603 2.769663 ACATGACCCATCCGTTAGCTTA 59.230 45.455 0.00 0.00 0.00 3.09
4453 4604 3.181465 ACATGACCCATCCGTTAGCTTAG 60.181 47.826 0.00 0.00 0.00 2.18
4454 4605 1.138266 TGACCCATCCGTTAGCTTAGC 59.862 52.381 0.00 0.00 0.00 3.09
4455 4606 1.138266 GACCCATCCGTTAGCTTAGCA 59.862 52.381 7.07 0.00 0.00 3.49
4456 4607 1.768870 ACCCATCCGTTAGCTTAGCAT 59.231 47.619 7.07 0.00 0.00 3.79
4457 4608 2.172717 ACCCATCCGTTAGCTTAGCATT 59.827 45.455 7.07 0.00 0.00 3.56
4458 4609 3.389983 ACCCATCCGTTAGCTTAGCATTA 59.610 43.478 7.07 0.00 0.00 1.90
4459 4610 4.041691 ACCCATCCGTTAGCTTAGCATTAT 59.958 41.667 7.07 0.00 0.00 1.28
4460 4611 4.393062 CCCATCCGTTAGCTTAGCATTATG 59.607 45.833 7.07 1.50 0.00 1.90
4461 4612 5.237815 CCATCCGTTAGCTTAGCATTATGA 58.762 41.667 7.07 0.00 0.00 2.15
4462 4613 5.877012 CCATCCGTTAGCTTAGCATTATGAT 59.123 40.000 7.07 0.00 0.00 2.45
4463 4614 6.036517 CCATCCGTTAGCTTAGCATTATGATC 59.963 42.308 7.07 0.00 0.00 2.92
4464 4615 5.161358 TCCGTTAGCTTAGCATTATGATCG 58.839 41.667 7.07 0.00 0.00 3.69
4465 4616 4.923871 CCGTTAGCTTAGCATTATGATCGT 59.076 41.667 7.07 0.00 0.00 3.73
4466 4617 5.405571 CCGTTAGCTTAGCATTATGATCGTT 59.594 40.000 7.07 0.00 0.00 3.85
4467 4618 6.584942 CCGTTAGCTTAGCATTATGATCGTTA 59.415 38.462 7.07 0.00 0.00 3.18
4468 4619 7.410513 CCGTTAGCTTAGCATTATGATCGTTAC 60.411 40.741 7.07 0.00 0.00 2.50
4469 4620 7.114388 CGTTAGCTTAGCATTATGATCGTTACA 59.886 37.037 7.07 0.00 0.00 2.41
4470 4621 8.428536 GTTAGCTTAGCATTATGATCGTTACAG 58.571 37.037 7.07 0.00 0.00 2.74
4471 4622 6.516718 AGCTTAGCATTATGATCGTTACAGT 58.483 36.000 7.07 0.00 0.00 3.55
4472 4623 6.986817 AGCTTAGCATTATGATCGTTACAGTT 59.013 34.615 7.07 0.00 0.00 3.16
4473 4624 7.495934 AGCTTAGCATTATGATCGTTACAGTTT 59.504 33.333 7.07 0.00 0.00 2.66
4474 4625 7.794349 GCTTAGCATTATGATCGTTACAGTTTC 59.206 37.037 0.00 0.00 0.00 2.78
4475 4626 8.710835 TTAGCATTATGATCGTTACAGTTTCA 57.289 30.769 0.00 0.00 0.00 2.69
4476 4627 7.792374 AGCATTATGATCGTTACAGTTTCAT 57.208 32.000 0.00 0.00 0.00 2.57
4477 4628 8.213518 AGCATTATGATCGTTACAGTTTCATT 57.786 30.769 0.00 0.00 0.00 2.57
4478 4629 8.124823 AGCATTATGATCGTTACAGTTTCATTG 58.875 33.333 0.00 0.00 0.00 2.82
4479 4630 7.096885 GCATTATGATCGTTACAGTTTCATTGC 60.097 37.037 0.00 0.00 0.00 3.56
4480 4631 7.609760 TTATGATCGTTACAGTTTCATTGCT 57.390 32.000 0.00 0.00 0.00 3.91
4481 4632 8.710835 TTATGATCGTTACAGTTTCATTGCTA 57.289 30.769 0.00 0.00 0.00 3.49
4482 4633 6.403333 TGATCGTTACAGTTTCATTGCTAC 57.597 37.500 0.00 0.00 0.00 3.58
4483 4634 6.163476 TGATCGTTACAGTTTCATTGCTACT 58.837 36.000 0.00 0.00 0.00 2.57
4484 4635 5.839262 TCGTTACAGTTTCATTGCTACTG 57.161 39.130 13.23 13.23 43.72 2.74
4485 4636 4.151689 TCGTTACAGTTTCATTGCTACTGC 59.848 41.667 14.21 0.00 42.28 4.40
4486 4637 4.152402 CGTTACAGTTTCATTGCTACTGCT 59.848 41.667 14.21 7.53 42.28 4.24
4487 4638 5.347635 CGTTACAGTTTCATTGCTACTGCTA 59.652 40.000 14.21 6.88 42.28 3.49
4488 4639 6.036083 CGTTACAGTTTCATTGCTACTGCTAT 59.964 38.462 14.21 3.07 42.28 2.97
4489 4640 7.402640 GTTACAGTTTCATTGCTACTGCTATC 58.597 38.462 14.21 5.92 42.28 2.08
4490 4641 5.738909 ACAGTTTCATTGCTACTGCTATCT 58.261 37.500 14.21 0.00 42.28 1.98
4491 4642 6.176183 ACAGTTTCATTGCTACTGCTATCTT 58.824 36.000 14.21 0.00 42.28 2.40
4492 4643 6.314896 ACAGTTTCATTGCTACTGCTATCTTC 59.685 38.462 14.21 0.00 42.28 2.87
4493 4644 6.314648 CAGTTTCATTGCTACTGCTATCTTCA 59.685 38.462 5.45 0.00 40.48 3.02
4494 4645 7.012138 CAGTTTCATTGCTACTGCTATCTTCAT 59.988 37.037 5.45 0.00 40.48 2.57
4495 4646 8.206867 AGTTTCATTGCTACTGCTATCTTCATA 58.793 33.333 0.00 0.00 40.48 2.15
4496 4647 8.830580 GTTTCATTGCTACTGCTATCTTCATAA 58.169 33.333 0.00 0.00 40.48 1.90
4497 4648 7.953158 TCATTGCTACTGCTATCTTCATAAC 57.047 36.000 0.00 0.00 40.48 1.89
4498 4649 7.730084 TCATTGCTACTGCTATCTTCATAACT 58.270 34.615 0.00 0.00 40.48 2.24
4499 4650 8.206867 TCATTGCTACTGCTATCTTCATAACTT 58.793 33.333 0.00 0.00 40.48 2.66
4500 4651 9.481340 CATTGCTACTGCTATCTTCATAACTTA 57.519 33.333 0.00 0.00 40.48 2.24
4516 4667 9.817809 TTCATAACTTATACATGTTCCTCAGAC 57.182 33.333 2.30 0.00 0.00 3.51
4517 4668 9.201989 TCATAACTTATACATGTTCCTCAGACT 57.798 33.333 2.30 0.00 0.00 3.24
4521 4672 8.768501 ACTTATACATGTTCCTCAGACTATGA 57.231 34.615 2.30 0.00 36.21 2.15
4535 4686 6.753180 TCAGACTATGAGATTATGCAACTCC 58.247 40.000 0.00 0.00 32.77 3.85
4536 4687 5.931146 CAGACTATGAGATTATGCAACTCCC 59.069 44.000 0.00 0.00 0.00 4.30
4537 4688 4.887748 ACTATGAGATTATGCAACTCCCG 58.112 43.478 0.00 0.00 0.00 5.14
4538 4689 4.588951 ACTATGAGATTATGCAACTCCCGA 59.411 41.667 0.00 0.00 0.00 5.14
4539 4690 3.904800 TGAGATTATGCAACTCCCGAA 57.095 42.857 0.00 0.00 0.00 4.30
4540 4691 4.422073 TGAGATTATGCAACTCCCGAAT 57.578 40.909 0.00 0.00 0.00 3.34
4541 4692 5.545063 TGAGATTATGCAACTCCCGAATA 57.455 39.130 0.00 0.00 0.00 1.75
4542 4693 5.297547 TGAGATTATGCAACTCCCGAATAC 58.702 41.667 0.00 0.00 0.00 1.89
4543 4694 4.642429 AGATTATGCAACTCCCGAATACC 58.358 43.478 0.00 0.00 0.00 2.73
4544 4695 2.519377 TATGCAACTCCCGAATACCG 57.481 50.000 0.00 0.00 38.18 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.904965 TGGTTCAAGGGTGTACAGATGTA 59.095 43.478 0.00 0.00 0.00 2.29
12 13 2.708861 TGGTTCAAGGGTGTACAGATGT 59.291 45.455 0.00 0.00 0.00 3.06
13 14 3.417069 TGGTTCAAGGGTGTACAGATG 57.583 47.619 0.00 0.00 0.00 2.90
14 15 4.783227 AGTATGGTTCAAGGGTGTACAGAT 59.217 41.667 0.00 0.00 0.00 2.90
15 16 4.020573 CAGTATGGTTCAAGGGTGTACAGA 60.021 45.833 0.00 0.00 0.00 3.41
16 17 4.020573 TCAGTATGGTTCAAGGGTGTACAG 60.021 45.833 0.00 0.00 36.16 2.74
17 18 3.904965 TCAGTATGGTTCAAGGGTGTACA 59.095 43.478 0.00 0.00 36.16 2.90
18 19 4.546829 TCAGTATGGTTCAAGGGTGTAC 57.453 45.455 0.00 0.00 36.16 2.90
19 20 5.338871 GGATTCAGTATGGTTCAAGGGTGTA 60.339 44.000 0.00 0.00 36.16 2.90
20 21 4.567747 GGATTCAGTATGGTTCAAGGGTGT 60.568 45.833 0.00 0.00 36.16 4.16
21 22 3.947834 GGATTCAGTATGGTTCAAGGGTG 59.052 47.826 0.00 0.00 36.16 4.61
22 23 3.370527 CGGATTCAGTATGGTTCAAGGGT 60.371 47.826 0.00 0.00 36.16 4.34
23 24 3.206150 CGGATTCAGTATGGTTCAAGGG 58.794 50.000 0.00 0.00 36.16 3.95
24 25 2.614057 GCGGATTCAGTATGGTTCAAGG 59.386 50.000 0.00 0.00 36.16 3.61
25 26 2.614057 GGCGGATTCAGTATGGTTCAAG 59.386 50.000 0.00 0.00 36.16 3.02
26 27 2.639065 GGCGGATTCAGTATGGTTCAA 58.361 47.619 0.00 0.00 36.16 2.69
27 28 1.134220 GGGCGGATTCAGTATGGTTCA 60.134 52.381 0.00 0.00 36.16 3.18
28 29 1.134220 TGGGCGGATTCAGTATGGTTC 60.134 52.381 0.00 0.00 36.16 3.62
29 30 0.916086 TGGGCGGATTCAGTATGGTT 59.084 50.000 0.00 0.00 36.16 3.67
30 31 0.180406 GTGGGCGGATTCAGTATGGT 59.820 55.000 0.00 0.00 36.16 3.55
31 32 0.469917 AGTGGGCGGATTCAGTATGG 59.530 55.000 0.00 0.00 36.16 2.74
32 33 1.134401 ACAGTGGGCGGATTCAGTATG 60.134 52.381 0.00 0.00 37.54 2.39
33 34 1.204146 ACAGTGGGCGGATTCAGTAT 58.796 50.000 0.00 0.00 0.00 2.12
34 35 0.981183 AACAGTGGGCGGATTCAGTA 59.019 50.000 0.00 0.00 0.00 2.74
35 36 0.110486 AAACAGTGGGCGGATTCAGT 59.890 50.000 0.00 0.00 0.00 3.41
36 37 0.523072 CAAACAGTGGGCGGATTCAG 59.477 55.000 0.00 0.00 0.00 3.02
37 38 0.893270 CCAAACAGTGGGCGGATTCA 60.893 55.000 0.00 0.00 44.64 2.57
38 39 1.883021 CCAAACAGTGGGCGGATTC 59.117 57.895 0.00 0.00 44.64 2.52
39 40 4.095590 CCAAACAGTGGGCGGATT 57.904 55.556 0.00 0.00 44.64 3.01
47 48 2.436417 CCATCCACTACCCAAACAGTG 58.564 52.381 0.00 0.00 41.51 3.66
48 49 1.354368 CCCATCCACTACCCAAACAGT 59.646 52.381 0.00 0.00 0.00 3.55
49 50 1.340991 CCCCATCCACTACCCAAACAG 60.341 57.143 0.00 0.00 0.00 3.16
50 51 0.701731 CCCCATCCACTACCCAAACA 59.298 55.000 0.00 0.00 0.00 2.83
51 52 0.996583 TCCCCATCCACTACCCAAAC 59.003 55.000 0.00 0.00 0.00 2.93
52 53 0.996583 GTCCCCATCCACTACCCAAA 59.003 55.000 0.00 0.00 0.00 3.28
53 54 0.178858 TGTCCCCATCCACTACCCAA 60.179 55.000 0.00 0.00 0.00 4.12
54 55 0.178858 TTGTCCCCATCCACTACCCA 60.179 55.000 0.00 0.00 0.00 4.51
55 56 1.133792 CATTGTCCCCATCCACTACCC 60.134 57.143 0.00 0.00 0.00 3.69
56 57 1.564348 ACATTGTCCCCATCCACTACC 59.436 52.381 0.00 0.00 0.00 3.18
57 58 2.741878 CGACATTGTCCCCATCCACTAC 60.742 54.545 11.12 0.00 0.00 2.73
58 59 1.484653 CGACATTGTCCCCATCCACTA 59.515 52.381 11.12 0.00 0.00 2.74
59 60 0.253044 CGACATTGTCCCCATCCACT 59.747 55.000 11.12 0.00 0.00 4.00
60 61 0.748005 CCGACATTGTCCCCATCCAC 60.748 60.000 11.12 0.00 0.00 4.02
61 62 1.607071 CCGACATTGTCCCCATCCA 59.393 57.895 11.12 0.00 0.00 3.41
62 63 1.823899 GCCGACATTGTCCCCATCC 60.824 63.158 11.12 0.00 0.00 3.51
63 64 0.466189 ATGCCGACATTGTCCCCATC 60.466 55.000 11.12 0.00 30.07 3.51
64 65 0.466189 GATGCCGACATTGTCCCCAT 60.466 55.000 11.12 12.55 36.35 4.00
65 66 1.077787 GATGCCGACATTGTCCCCA 60.078 57.895 11.12 8.55 36.35 4.96
66 67 0.679640 TTGATGCCGACATTGTCCCC 60.680 55.000 11.12 3.21 36.35 4.81
67 68 0.734889 CTTGATGCCGACATTGTCCC 59.265 55.000 11.12 3.55 36.35 4.46
68 69 1.398390 GTCTTGATGCCGACATTGTCC 59.602 52.381 11.12 0.00 36.35 4.02
69 70 2.076100 TGTCTTGATGCCGACATTGTC 58.924 47.619 6.73 6.73 36.35 3.18
70 71 2.183478 TGTCTTGATGCCGACATTGT 57.817 45.000 0.00 0.00 36.35 2.71
74 75 0.804364 GCAATGTCTTGATGCCGACA 59.196 50.000 0.00 0.00 43.51 4.35
75 76 0.804364 TGCAATGTCTTGATGCCGAC 59.196 50.000 0.00 0.00 39.31 4.79
76 77 1.199789 GTTGCAATGTCTTGATGCCGA 59.800 47.619 0.59 0.00 39.31 5.54
77 78 1.621107 GTTGCAATGTCTTGATGCCG 58.379 50.000 0.59 0.00 39.31 5.69
78 79 1.621107 CGTTGCAATGTCTTGATGCC 58.379 50.000 10.65 0.00 39.31 4.40
79 80 0.986992 GCGTTGCAATGTCTTGATGC 59.013 50.000 19.49 0.00 40.45 3.91
80 81 1.621107 GGCGTTGCAATGTCTTGATG 58.379 50.000 19.49 0.00 34.04 3.07
81 82 0.527565 GGGCGTTGCAATGTCTTGAT 59.472 50.000 21.82 0.00 34.04 2.57
82 83 0.537143 AGGGCGTTGCAATGTCTTGA 60.537 50.000 21.82 0.00 34.04 3.02
83 84 0.314935 AAGGGCGTTGCAATGTCTTG 59.685 50.000 21.82 0.91 35.36 3.02
84 85 1.812571 CTAAGGGCGTTGCAATGTCTT 59.187 47.619 21.82 22.53 0.00 3.01
85 86 1.453155 CTAAGGGCGTTGCAATGTCT 58.547 50.000 21.82 15.15 0.00 3.41
86 87 0.179163 GCTAAGGGCGTTGCAATGTC 60.179 55.000 19.49 17.37 0.00 3.06
87 88 1.595093 GGCTAAGGGCGTTGCAATGT 61.595 55.000 19.49 2.77 42.94 2.71
88 89 1.139520 GGCTAAGGGCGTTGCAATG 59.860 57.895 14.54 14.54 42.94 2.82
89 90 3.603365 GGCTAAGGGCGTTGCAAT 58.397 55.556 0.59 0.00 42.94 3.56
97 98 4.554036 CCTGAGGCGGCTAAGGGC 62.554 72.222 31.02 10.98 40.90 5.19
98 99 4.554036 GCCTGAGGCGGCTAAGGG 62.554 72.222 36.68 26.13 46.63 3.95
108 109 1.866853 GAACAAAAGGCGGCCTGAGG 61.867 60.000 24.63 16.65 32.13 3.86
109 110 1.172180 TGAACAAAAGGCGGCCTGAG 61.172 55.000 24.63 17.34 32.13 3.35
110 111 1.152860 TGAACAAAAGGCGGCCTGA 60.153 52.632 24.63 0.00 32.13 3.86
111 112 1.007387 GTGAACAAAAGGCGGCCTG 60.007 57.895 24.63 13.96 32.13 4.85
112 113 0.109723 TAGTGAACAAAAGGCGGCCT 59.890 50.000 17.69 17.69 33.87 5.19
113 114 1.173913 ATAGTGAACAAAAGGCGGCC 58.826 50.000 12.11 12.11 0.00 6.13
114 115 2.223272 GCTATAGTGAACAAAAGGCGGC 60.223 50.000 0.00 0.00 0.00 6.53
115 116 3.006940 TGCTATAGTGAACAAAAGGCGG 58.993 45.455 0.84 0.00 0.00 6.13
116 117 3.684788 AGTGCTATAGTGAACAAAAGGCG 59.315 43.478 0.84 0.00 0.00 5.52
117 118 6.538742 TCATAGTGCTATAGTGAACAAAAGGC 59.461 38.462 0.84 0.00 0.00 4.35
118 119 8.492673 TTCATAGTGCTATAGTGAACAAAAGG 57.507 34.615 0.84 0.00 0.00 3.11
121 122 8.892723 CCAATTCATAGTGCTATAGTGAACAAA 58.107 33.333 0.84 0.00 32.30 2.83
122 123 7.498900 CCCAATTCATAGTGCTATAGTGAACAA 59.501 37.037 0.84 0.00 32.30 2.83
123 124 6.992123 CCCAATTCATAGTGCTATAGTGAACA 59.008 38.462 0.84 0.00 32.30 3.18
124 125 6.073003 GCCCAATTCATAGTGCTATAGTGAAC 60.073 42.308 0.84 0.00 32.30 3.18
125 126 5.997746 GCCCAATTCATAGTGCTATAGTGAA 59.002 40.000 0.84 3.60 33.82 3.18
126 127 5.307976 AGCCCAATTCATAGTGCTATAGTGA 59.692 40.000 0.84 0.00 0.00 3.41
127 128 5.555017 AGCCCAATTCATAGTGCTATAGTG 58.445 41.667 0.84 0.00 0.00 2.74
128 129 5.307976 TGAGCCCAATTCATAGTGCTATAGT 59.692 40.000 0.84 0.00 0.00 2.12
129 130 5.641209 GTGAGCCCAATTCATAGTGCTATAG 59.359 44.000 0.00 0.00 0.00 1.31
130 131 5.551233 GTGAGCCCAATTCATAGTGCTATA 58.449 41.667 0.00 0.00 0.00 1.31
131 132 4.392940 GTGAGCCCAATTCATAGTGCTAT 58.607 43.478 0.00 0.00 0.00 2.97
132 133 3.741075 CGTGAGCCCAATTCATAGTGCTA 60.741 47.826 0.00 0.00 0.00 3.49
133 134 2.648059 GTGAGCCCAATTCATAGTGCT 58.352 47.619 0.00 0.00 0.00 4.40
134 135 1.331756 CGTGAGCCCAATTCATAGTGC 59.668 52.381 0.00 0.00 0.00 4.40
175 176 3.325753 AGAGACAGGCCCAGGCAC 61.326 66.667 11.50 0.00 44.11 5.01
178 179 4.106925 GGCAGAGACAGGCCCAGG 62.107 72.222 0.00 0.00 44.53 4.45
188 190 2.895680 GTCATCCAGCGGCAGAGA 59.104 61.111 1.45 0.00 0.00 3.10
192 194 2.202919 CATCGTCATCCAGCGGCA 60.203 61.111 1.45 0.00 0.00 5.69
193 195 2.969238 CCATCGTCATCCAGCGGC 60.969 66.667 0.00 0.00 0.00 6.53
200 202 3.440173 ACCATTGAACAACCATCGTCATC 59.560 43.478 0.00 0.00 0.00 2.92
207 209 3.843422 TCTTGGACCATTGAACAACCAT 58.157 40.909 0.00 0.00 0.00 3.55
209 211 4.871933 ATTCTTGGACCATTGAACAACC 57.128 40.909 11.22 0.00 0.00 3.77
212 214 4.523943 CCAGAATTCTTGGACCATTGAACA 59.476 41.667 4.86 0.00 0.00 3.18
217 223 4.118168 ACACCAGAATTCTTGGACCATT 57.882 40.909 22.86 5.14 0.00 3.16
218 224 3.814504 ACACCAGAATTCTTGGACCAT 57.185 42.857 22.86 5.42 0.00 3.55
246 252 6.811253 AATTACAAAGCATCCTTGACGTAA 57.189 33.333 0.00 0.00 31.39 3.18
249 255 6.148948 TCAAAATTACAAAGCATCCTTGACG 58.851 36.000 0.00 0.00 0.00 4.35
250 256 7.814107 TCATCAAAATTACAAAGCATCCTTGAC 59.186 33.333 0.00 0.00 0.00 3.18
251 257 7.894708 TCATCAAAATTACAAAGCATCCTTGA 58.105 30.769 0.00 0.00 0.00 3.02
252 258 8.437742 GTTCATCAAAATTACAAAGCATCCTTG 58.562 33.333 0.00 0.00 0.00 3.61
254 260 7.899973 AGTTCATCAAAATTACAAAGCATCCT 58.100 30.769 0.00 0.00 0.00 3.24
270 276 9.519191 TCTGGATCTATTGAAAAAGTTCATCAA 57.481 29.630 5.93 5.93 43.29 2.57
305 312 6.485393 CGTAGGAAACGTTTTCCTTTTTGTA 58.515 36.000 26.28 12.37 46.21 2.41
306 313 5.334319 CGTAGGAAACGTTTTCCTTTTTGT 58.666 37.500 26.28 8.30 46.21 2.83
331 338 0.105913 AGCCTACCTCTCTGCCCTAC 60.106 60.000 0.00 0.00 0.00 3.18
479 496 4.998672 TGTACCGGACATTAACCTTTTGAG 59.001 41.667 9.46 0.00 31.20 3.02
480 497 4.970711 TGTACCGGACATTAACCTTTTGA 58.029 39.130 9.46 0.00 31.20 2.69
493 510 6.375945 TTTCCTTTTAAGTTTGTACCGGAC 57.624 37.500 9.46 2.18 0.00 4.79
505 522 6.659242 TCTGTTAGGATGGCTTTCCTTTTAAG 59.341 38.462 13.58 8.02 43.88 1.85
513 530 4.082733 GGTTGTTCTGTTAGGATGGCTTTC 60.083 45.833 0.00 0.00 0.00 2.62
514 531 3.826729 GGTTGTTCTGTTAGGATGGCTTT 59.173 43.478 0.00 0.00 0.00 3.51
516 533 2.290960 GGGTTGTTCTGTTAGGATGGCT 60.291 50.000 0.00 0.00 0.00 4.75
517 534 2.092323 GGGTTGTTCTGTTAGGATGGC 58.908 52.381 0.00 0.00 0.00 4.40
518 535 3.433306 TGGGTTGTTCTGTTAGGATGG 57.567 47.619 0.00 0.00 0.00 3.51
519 536 4.141287 TGTTGGGTTGTTCTGTTAGGATG 58.859 43.478 0.00 0.00 0.00 3.51
559 576 4.143221 GCTCGTTTCAGAGTGAGATTGTTC 60.143 45.833 0.00 0.00 40.26 3.18
611 629 2.563427 GTTTCTTGGCCTGCTCGC 59.437 61.111 3.32 0.00 0.00 5.03
724 746 2.096496 GTGAGTGGCGATGAATTGAAGG 59.904 50.000 0.00 0.00 0.00 3.46
762 795 0.106268 ATGGCAAACAGTGGTGGTGA 60.106 50.000 0.00 0.00 0.00 4.02
990 1027 1.829349 GCTTCATCATGCCGCTCTCG 61.829 60.000 0.00 0.00 0.00 4.04
991 1028 0.532417 AGCTTCATCATGCCGCTCTC 60.532 55.000 0.00 0.00 0.00 3.20
992 1029 0.814410 CAGCTTCATCATGCCGCTCT 60.814 55.000 0.00 0.00 0.00 4.09
993 1030 1.647629 CAGCTTCATCATGCCGCTC 59.352 57.895 0.00 0.00 0.00 5.03
1246 1291 1.110442 CCTGGAGAATCTCGCTGACT 58.890 55.000 3.96 0.00 33.73 3.41
1252 1297 0.179062 CCTTGGCCTGGAGAATCTCG 60.179 60.000 3.32 0.00 33.73 4.04
1399 1445 2.749044 AGGCATGCCGAGCAACAG 60.749 61.111 30.50 0.00 43.62 3.16
1481 1527 2.617021 GGTGCGTGAAGAAGGGGATAAA 60.617 50.000 0.00 0.00 0.00 1.40
1541 1587 5.354234 ACCACGGATGAAATTAACTTGCTAG 59.646 40.000 0.00 0.00 0.00 3.42
1579 1625 8.827677 GGCTAAAGAACACAATAATACACTAGG 58.172 37.037 0.00 0.00 0.00 3.02
1580 1626 8.827677 GGGCTAAAGAACACAATAATACACTAG 58.172 37.037 0.00 0.00 0.00 2.57
1633 1698 1.595466 TTTGTGCCATTCCGTACGTT 58.405 45.000 15.21 0.00 0.00 3.99
1634 1699 1.595466 TTTTGTGCCATTCCGTACGT 58.405 45.000 15.21 0.00 0.00 3.57
1646 1711 7.307493 TGGCGAGATCATATATATTTTGTGC 57.693 36.000 0.00 0.00 0.00 4.57
1656 1721 3.509967 ACGAACCATGGCGAGATCATATA 59.490 43.478 13.04 0.00 0.00 0.86
1718 1783 3.118956 GGATTTCGTGAGAGATGGAGTGT 60.119 47.826 0.00 0.00 43.69 3.55
1724 1789 5.010516 ACTCCATAGGATTTCGTGAGAGATG 59.989 44.000 0.00 0.00 43.69 2.90
1742 1807 4.083110 CGTTGATTTTCAGAGCAACTCCAT 60.083 41.667 0.00 0.00 38.68 3.41
1788 1853 2.937873 GCCATTAAGTCAGTGGGCGTAA 60.938 50.000 0.00 0.00 33.58 3.18
1789 1854 1.406341 GCCATTAAGTCAGTGGGCGTA 60.406 52.381 0.00 0.00 33.58 4.42
1791 1856 2.098293 GCCATTAAGTCAGTGGGCG 58.902 57.895 0.00 0.00 33.58 6.13
1792 1857 1.993369 GCGCCATTAAGTCAGTGGGC 61.993 60.000 0.00 0.00 38.04 5.36
1793 1858 1.376609 GGCGCCATTAAGTCAGTGGG 61.377 60.000 24.80 0.00 33.58 4.61
1825 1894 4.814294 CCAGCGCCCGACCTGTAC 62.814 72.222 2.29 0.00 0.00 2.90
2029 2098 7.765819 TGCTACTAACTCGTAGTACATGAAGTA 59.234 37.037 0.00 1.27 41.51 2.24
2031 2100 7.012959 TGCTACTAACTCGTAGTACATGAAG 57.987 40.000 0.00 0.00 41.51 3.02
2032 2101 6.990341 TGCTACTAACTCGTAGTACATGAA 57.010 37.500 0.00 0.00 41.51 2.57
2035 2104 7.804843 ATCTTGCTACTAACTCGTAGTACAT 57.195 36.000 0.38 0.00 41.51 2.29
2036 2105 7.621428 AATCTTGCTACTAACTCGTAGTACA 57.379 36.000 0.38 0.00 41.51 2.90
2037 2106 8.180267 TGAAATCTTGCTACTAACTCGTAGTAC 58.820 37.037 0.00 0.00 41.51 2.73
2038 2107 8.272545 TGAAATCTTGCTACTAACTCGTAGTA 57.727 34.615 0.00 0.00 41.51 1.82
2039 2108 7.154435 TGAAATCTTGCTACTAACTCGTAGT 57.846 36.000 0.00 0.00 45.42 2.73
2040 2109 8.635877 AATGAAATCTTGCTACTAACTCGTAG 57.364 34.615 0.00 0.00 39.83 3.51
2068 2137 4.543590 ACAAGACAATTGATCCGAGAGT 57.456 40.909 13.59 0.00 0.00 3.24
2072 2141 4.221924 TCACCTACAAGACAATTGATCCGA 59.778 41.667 13.59 0.00 0.00 4.55
2112 2184 0.533491 ACAGCGCAATCGGGTACTTA 59.467 50.000 11.47 0.00 35.95 2.24
2124 2196 1.374631 GTGGATCAGTGACAGCGCA 60.375 57.895 11.47 0.00 0.00 6.09
2151 2223 2.877691 GCCATGAGAACCAACGCC 59.122 61.111 0.00 0.00 0.00 5.68
2155 2227 0.911769 AGGATCGCCATGAGAACCAA 59.088 50.000 15.80 0.00 36.29 3.67
2319 2391 7.433131 GCAACATCACTGAACATACATAAATGG 59.567 37.037 0.00 0.00 0.00 3.16
2320 2392 8.186163 AGCAACATCACTGAACATACATAAATG 58.814 33.333 0.00 0.00 0.00 2.32
2322 2394 7.686438 AGCAACATCACTGAACATACATAAA 57.314 32.000 0.00 0.00 0.00 1.40
2326 2398 7.174772 ACATAAAGCAACATCACTGAACATACA 59.825 33.333 0.00 0.00 0.00 2.29
2327 2399 7.482743 CACATAAAGCAACATCACTGAACATAC 59.517 37.037 0.00 0.00 0.00 2.39
2365 2440 6.535508 GGTAGAAACCTACACTGAATAGCAAG 59.464 42.308 0.00 0.00 43.08 4.01
2370 2445 7.827236 CCATTTGGTAGAAACCTACACTGAATA 59.173 37.037 0.00 0.00 46.91 1.75
2419 2494 1.805945 GAACTCCGCTGCGACGATT 60.806 57.895 25.45 11.79 34.06 3.34
2428 2503 4.072131 TCTTAAAAAGCATGAACTCCGCT 58.928 39.130 0.00 0.00 37.68 5.52
2509 2584 6.747280 CAGTTGTGTTCAAAGTACAGAAAAGG 59.253 38.462 0.00 0.00 35.20 3.11
2605 2680 0.250234 TGGCATGAGTGGTAGTCTGC 59.750 55.000 0.00 0.00 0.00 4.26
2696 2775 3.855689 AATGTTGAAGCAGGATTTCCG 57.144 42.857 0.00 0.00 42.08 4.30
2735 2814 1.070758 ACTCCGATTGACACAGTTGCT 59.929 47.619 0.00 0.00 0.00 3.91
2741 2820 0.320683 CAGCCACTCCGATTGACACA 60.321 55.000 0.00 0.00 0.00 3.72
2768 2847 3.253677 AGTTGAACTCTAGGTCTGTGACG 59.746 47.826 0.00 0.00 32.65 4.35
2811 2890 1.002403 TAGGGACGATCCAGGCCAA 59.998 57.895 5.01 0.00 42.52 4.52
2867 2946 2.281276 GCGGTCCAGTTTCCGGTT 60.281 61.111 0.00 0.00 45.85 4.44
2929 3008 0.958099 CGAAAAACAATGCGACGACG 59.042 50.000 2.12 2.12 42.93 5.12
2934 3013 4.555348 ACTTAACCGAAAAACAATGCGA 57.445 36.364 0.00 0.00 0.00 5.10
2962 3041 3.738982 TGGTTGATCGAACAATCTGTGT 58.261 40.909 18.09 0.00 44.64 3.72
2963 3042 3.125829 CCTGGTTGATCGAACAATCTGTG 59.874 47.826 18.09 9.09 36.12 3.66
2964 3043 3.338249 CCTGGTTGATCGAACAATCTGT 58.662 45.455 18.09 0.00 36.12 3.41
3072 3151 6.041409 TGGCACAACTATTTCTGAAATTCCAA 59.959 34.615 19.68 2.46 31.92 3.53
3093 3172 1.558294 AGAGCAGAGATGACAATGGCA 59.442 47.619 0.00 0.00 0.00 4.92
3150 3229 2.562738 GGAAAAATGGTCTCACCCAAGG 59.437 50.000 0.00 0.00 37.50 3.61
3176 3255 8.405531 CACAAGGAAGAATGTTCTTGTTAAGAA 58.594 33.333 12.39 0.14 46.84 2.52
3181 3260 6.122277 TCTCACAAGGAAGAATGTTCTTGTT 58.878 36.000 12.39 3.86 46.84 2.83
3220 3302 5.942236 TCAATTAGCAGCAAGTTCATCTTCT 59.058 36.000 0.00 0.00 33.63 2.85
3425 3509 0.991920 CCTTCTTGAGGCCCAGGTAA 59.008 55.000 0.00 0.00 39.09 2.85
3485 3569 0.529378 GCTTGCCCATGAAGGAGTTG 59.471 55.000 0.00 0.00 41.22 3.16
3509 3593 4.166888 GAGCTGCCTCCATCGCCA 62.167 66.667 0.00 0.00 31.68 5.69
3595 3687 2.698274 TGCAGTGAGAGTCTACCACAAA 59.302 45.455 12.96 0.00 33.53 2.83
3596 3688 2.316108 TGCAGTGAGAGTCTACCACAA 58.684 47.619 12.96 0.00 33.53 3.33
3597 3689 1.995376 TGCAGTGAGAGTCTACCACA 58.005 50.000 12.96 0.00 33.53 4.17
3598 3690 2.757868 AGATGCAGTGAGAGTCTACCAC 59.242 50.000 4.21 4.21 0.00 4.16
3653 3777 8.421249 TGCCAATGGGAAAAGGAATAATATAG 57.579 34.615 0.00 0.00 35.59 1.31
3672 3802 2.957402 TTGAGAAGACACCTGCCAAT 57.043 45.000 0.00 0.00 0.00 3.16
3676 3806 5.382618 AAAATCATTGAGAAGACACCTGC 57.617 39.130 0.00 0.00 0.00 4.85
3747 3893 7.070322 TGCCGGTTAGAGGAGTAAACTAAATAT 59.930 37.037 1.90 0.00 0.00 1.28
3749 3895 5.188359 TGCCGGTTAGAGGAGTAAACTAAAT 59.812 40.000 1.90 0.00 0.00 1.40
3821 3972 4.452455 CCAAATATAGGAGTTCGTGATGCC 59.548 45.833 0.00 0.00 0.00 4.40
3830 3981 4.103311 GGAGGCTGACCAAATATAGGAGTT 59.897 45.833 0.00 0.00 39.06 3.01
3844 3995 4.035102 GGTGGGTGGGAGGCTGAC 62.035 72.222 0.00 0.00 0.00 3.51
3851 4002 1.073931 TTTTATTCGGGTGGGTGGGA 58.926 50.000 0.00 0.00 0.00 4.37
3879 4030 3.148279 GTGCGACCGAGGGGAGAT 61.148 66.667 0.00 0.00 36.97 2.75
3921 4072 3.864983 AAGAAGGGAGGCACCGGGA 62.865 63.158 6.32 0.00 40.11 5.14
3922 4073 3.330720 AAGAAGGGAGGCACCGGG 61.331 66.667 6.32 0.00 40.11 5.73
3927 4078 1.899437 CGTAGGCAAGAAGGGAGGCA 61.899 60.000 0.00 0.00 0.00 4.75
3957 4108 1.425428 GAGGATCAAAAGTGGCGCG 59.575 57.895 0.00 0.00 33.17 6.86
3975 4126 1.661341 GAGCACAGCAAGTCCTATGG 58.339 55.000 0.00 0.00 0.00 2.74
3985 4136 2.611800 ATGGGGAGGAGCACAGCA 60.612 61.111 0.00 0.00 0.00 4.41
3988 4139 2.692368 GGGATGGGGAGGAGCACA 60.692 66.667 0.00 0.00 0.00 4.57
3990 4141 0.925720 AATTGGGATGGGGAGGAGCA 60.926 55.000 0.00 0.00 0.00 4.26
4021 4172 0.108089 TTTAAGCATCTACGGCGGCA 60.108 50.000 13.24 0.00 36.08 5.69
4030 4181 8.954350 GCCATATATCTGTTGATTTAAGCATCT 58.046 33.333 0.00 0.00 34.32 2.90
4043 4194 0.328258 GCGGGGGCCATATATCTGTT 59.672 55.000 4.39 0.00 0.00 3.16
4064 4215 4.814294 GTCGAATCCAGCGCCGGT 62.814 66.667 10.01 0.00 0.00 5.28
4069 4220 3.918220 GCTGCGTCGAATCCAGCG 61.918 66.667 14.74 2.43 41.99 5.18
4072 4223 4.812476 CGGGCTGCGTCGAATCCA 62.812 66.667 8.02 0.00 0.00 3.41
4094 4245 6.118852 TCCATCCAAAACACGATGATATCAA 58.881 36.000 9.99 0.00 38.53 2.57
4099 4250 4.035558 CGAATCCATCCAAAACACGATGAT 59.964 41.667 0.00 0.00 38.53 2.45
4100 4251 3.373748 CGAATCCATCCAAAACACGATGA 59.626 43.478 0.00 0.00 38.53 2.92
4129 4280 2.112297 GGGGTTGCACGGTTCAGA 59.888 61.111 0.00 0.00 0.00 3.27
4138 4289 1.943730 AAGTGGTTGAGGGGGTTGCA 61.944 55.000 0.00 0.00 0.00 4.08
4157 4308 0.107897 AATACCGAGATGTGGCGCAA 60.108 50.000 10.83 0.00 0.00 4.85
4161 4312 2.158957 TCCTTCAATACCGAGATGTGGC 60.159 50.000 0.00 0.00 0.00 5.01
4164 4315 6.428159 GCATATTTCCTTCAATACCGAGATGT 59.572 38.462 0.00 0.00 0.00 3.06
4176 4327 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02
4188 4339 8.637196 AATAACTTTATTATTGCCTCTAGGGC 57.363 34.615 13.60 13.60 44.71 5.19
4246 4397 9.214957 CCGGTTAATACAATTCTAGCATGAATA 57.785 33.333 0.00 0.00 35.82 1.75
4247 4398 7.936847 TCCGGTTAATACAATTCTAGCATGAAT 59.063 33.333 0.00 0.00 38.19 2.57
4248 4399 7.276658 TCCGGTTAATACAATTCTAGCATGAA 58.723 34.615 0.00 0.00 0.00 2.57
4249 4400 6.822442 TCCGGTTAATACAATTCTAGCATGA 58.178 36.000 0.00 0.00 0.00 3.07
4250 4401 7.490962 TTCCGGTTAATACAATTCTAGCATG 57.509 36.000 0.00 0.00 0.00 4.06
4251 4402 7.773690 AGTTTCCGGTTAATACAATTCTAGCAT 59.226 33.333 0.00 0.00 0.00 3.79
4252 4403 7.107542 AGTTTCCGGTTAATACAATTCTAGCA 58.892 34.615 0.00 0.00 0.00 3.49
4253 4404 7.549615 AGTTTCCGGTTAATACAATTCTAGC 57.450 36.000 0.00 0.00 0.00 3.42
4258 4409 9.723601 TGTACTAAGTTTCCGGTTAATACAATT 57.276 29.630 0.00 0.00 0.00 2.32
4259 4410 9.895138 ATGTACTAAGTTTCCGGTTAATACAAT 57.105 29.630 0.00 0.00 28.05 2.71
4260 4411 9.153721 CATGTACTAAGTTTCCGGTTAATACAA 57.846 33.333 0.00 0.00 28.05 2.41
4261 4412 8.313292 ACATGTACTAAGTTTCCGGTTAATACA 58.687 33.333 0.00 3.81 28.60 2.29
4262 4413 8.598075 CACATGTACTAAGTTTCCGGTTAATAC 58.402 37.037 0.00 0.00 0.00 1.89
4263 4414 8.313292 ACACATGTACTAAGTTTCCGGTTAATA 58.687 33.333 0.00 0.00 0.00 0.98
4264 4415 7.118680 CACACATGTACTAAGTTTCCGGTTAAT 59.881 37.037 0.00 0.00 0.00 1.40
4265 4416 6.424509 CACACATGTACTAAGTTTCCGGTTAA 59.575 38.462 0.00 0.00 0.00 2.01
4266 4417 5.927689 CACACATGTACTAAGTTTCCGGTTA 59.072 40.000 0.00 0.00 0.00 2.85
4267 4418 4.753107 CACACATGTACTAAGTTTCCGGTT 59.247 41.667 0.00 0.00 0.00 4.44
4268 4419 4.039488 TCACACATGTACTAAGTTTCCGGT 59.961 41.667 0.00 0.00 0.00 5.28
4269 4420 4.562082 TCACACATGTACTAAGTTTCCGG 58.438 43.478 0.00 0.00 0.00 5.14
4270 4421 6.721571 ATTCACACATGTACTAAGTTTCCG 57.278 37.500 0.00 0.00 0.00 4.30
4271 4422 8.542497 TGTATTCACACATGTACTAAGTTTCC 57.458 34.615 0.00 0.00 0.00 3.13
4279 4430 9.719355 TTTTGTCTATGTATTCACACATGTACT 57.281 29.630 0.00 0.00 39.46 2.73
4299 4450 9.819267 GGCATACTAGGGACTATATATTTTGTC 57.181 37.037 0.00 0.00 41.70 3.18
4300 4451 9.562226 AGGCATACTAGGGACTATATATTTTGT 57.438 33.333 0.00 0.00 41.70 2.83
4305 4456 9.468357 AGTAGAGGCATACTAGGGACTATATAT 57.532 37.037 0.00 0.00 41.70 0.86
4306 4457 8.873156 AGTAGAGGCATACTAGGGACTATATA 57.127 38.462 0.00 0.00 41.70 0.86
4307 4458 7.774694 AGTAGAGGCATACTAGGGACTATAT 57.225 40.000 0.00 0.00 41.70 0.86
4308 4459 7.239143 TCAAGTAGAGGCATACTAGGGACTATA 59.761 40.741 3.23 0.00 41.70 1.31
4309 4460 6.045695 TCAAGTAGAGGCATACTAGGGACTAT 59.954 42.308 3.23 0.00 41.70 2.12
4310 4461 5.371769 TCAAGTAGAGGCATACTAGGGACTA 59.628 44.000 3.23 0.00 41.75 2.59
4311 4462 4.168283 TCAAGTAGAGGCATACTAGGGACT 59.832 45.833 3.23 0.00 46.37 3.85
4312 4463 4.278919 GTCAAGTAGAGGCATACTAGGGAC 59.721 50.000 3.23 7.70 34.90 4.46
4313 4464 4.168283 AGTCAAGTAGAGGCATACTAGGGA 59.832 45.833 3.23 0.66 34.90 4.20
4314 4465 4.475345 AGTCAAGTAGAGGCATACTAGGG 58.525 47.826 3.23 0.00 34.90 3.53
4315 4466 5.182380 GCTAGTCAAGTAGAGGCATACTAGG 59.818 48.000 0.00 0.67 36.85 3.02
4316 4467 6.001460 AGCTAGTCAAGTAGAGGCATACTAG 58.999 44.000 0.00 0.00 38.50 2.57
4317 4468 5.942961 AGCTAGTCAAGTAGAGGCATACTA 58.057 41.667 3.23 0.00 34.90 1.82
4318 4469 4.798882 AGCTAGTCAAGTAGAGGCATACT 58.201 43.478 0.00 0.00 37.61 2.12
4319 4470 4.319911 CGAGCTAGTCAAGTAGAGGCATAC 60.320 50.000 0.00 0.00 0.00 2.39
4320 4471 3.815962 CGAGCTAGTCAAGTAGAGGCATA 59.184 47.826 0.00 0.00 0.00 3.14
4321 4472 2.621055 CGAGCTAGTCAAGTAGAGGCAT 59.379 50.000 0.00 0.00 0.00 4.40
4322 4473 2.017782 CGAGCTAGTCAAGTAGAGGCA 58.982 52.381 0.00 0.00 0.00 4.75
4323 4474 2.018515 ACGAGCTAGTCAAGTAGAGGC 58.981 52.381 0.00 0.00 0.00 4.70
4324 4475 5.814764 TTAACGAGCTAGTCAAGTAGAGG 57.185 43.478 0.00 0.00 0.00 3.69
4325 4476 7.017498 TGATTAACGAGCTAGTCAAGTAGAG 57.983 40.000 0.00 0.00 0.00 2.43
4326 4477 6.997239 TGATTAACGAGCTAGTCAAGTAGA 57.003 37.500 0.00 0.00 0.00 2.59
4327 4478 7.968956 TCTTTGATTAACGAGCTAGTCAAGTAG 59.031 37.037 0.00 0.00 31.56 2.57
4328 4479 7.823665 TCTTTGATTAACGAGCTAGTCAAGTA 58.176 34.615 0.00 0.00 31.56 2.24
4329 4480 6.688578 TCTTTGATTAACGAGCTAGTCAAGT 58.311 36.000 0.00 0.00 31.56 3.16
4330 4481 7.254252 CCATCTTTGATTAACGAGCTAGTCAAG 60.254 40.741 0.00 0.00 31.56 3.02
4331 4482 6.535150 CCATCTTTGATTAACGAGCTAGTCAA 59.465 38.462 0.00 0.00 0.00 3.18
4332 4483 6.042777 CCATCTTTGATTAACGAGCTAGTCA 58.957 40.000 0.00 0.00 0.00 3.41
4333 4484 6.043411 ACCATCTTTGATTAACGAGCTAGTC 58.957 40.000 0.00 0.00 0.00 2.59
4334 4485 5.978814 ACCATCTTTGATTAACGAGCTAGT 58.021 37.500 0.00 0.00 0.00 2.57
4335 4486 6.910536 AACCATCTTTGATTAACGAGCTAG 57.089 37.500 0.00 0.00 0.00 3.42
4336 4487 7.985184 ACATAACCATCTTTGATTAACGAGCTA 59.015 33.333 0.00 0.00 0.00 3.32
4337 4488 6.823689 ACATAACCATCTTTGATTAACGAGCT 59.176 34.615 0.00 0.00 0.00 4.09
4338 4489 7.016361 ACATAACCATCTTTGATTAACGAGC 57.984 36.000 0.00 0.00 0.00 5.03
4339 4490 9.490663 GAAACATAACCATCTTTGATTAACGAG 57.509 33.333 0.00 0.00 0.00 4.18
4340 4491 8.455682 GGAAACATAACCATCTTTGATTAACGA 58.544 33.333 0.00 0.00 0.00 3.85
4341 4492 8.458843 AGGAAACATAACCATCTTTGATTAACG 58.541 33.333 0.00 0.00 0.00 3.18
4356 4507 8.612619 CACATGTCTATGGTTAGGAAACATAAC 58.387 37.037 0.00 0.00 38.66 1.89
4357 4508 8.325787 ACACATGTCTATGGTTAGGAAACATAA 58.674 33.333 0.00 0.00 38.66 1.90
4358 4509 7.857456 ACACATGTCTATGGTTAGGAAACATA 58.143 34.615 0.00 0.00 38.66 2.29
4359 4510 6.721318 ACACATGTCTATGGTTAGGAAACAT 58.279 36.000 0.00 0.00 38.66 2.71
4360 4511 6.121776 ACACATGTCTATGGTTAGGAAACA 57.878 37.500 0.00 0.00 38.66 2.83
4361 4512 6.430000 ACAACACATGTCTATGGTTAGGAAAC 59.570 38.462 0.00 0.00 37.96 2.78
4362 4513 6.539173 ACAACACATGTCTATGGTTAGGAAA 58.461 36.000 0.00 0.00 37.96 3.13
4363 4514 6.121776 ACAACACATGTCTATGGTTAGGAA 57.878 37.500 0.00 0.00 37.96 3.36
4364 4515 5.755409 ACAACACATGTCTATGGTTAGGA 57.245 39.130 0.00 0.00 37.96 2.94
4377 4528 5.451039 TCGTTCATCAAATGACAACACATG 58.549 37.500 0.00 0.00 39.39 3.21
4378 4529 5.469760 TCTCGTTCATCAAATGACAACACAT 59.530 36.000 7.48 0.00 39.39 3.21
4379 4530 4.813697 TCTCGTTCATCAAATGACAACACA 59.186 37.500 7.48 0.00 39.39 3.72
4380 4531 5.342806 TCTCGTTCATCAAATGACAACAC 57.657 39.130 7.48 0.00 39.39 3.32
4381 4532 5.700373 TGATCTCGTTCATCAAATGACAACA 59.300 36.000 0.00 0.00 39.39 3.33
4382 4533 6.017933 GTGATCTCGTTCATCAAATGACAAC 58.982 40.000 0.00 0.00 39.39 3.32
4383 4534 5.700373 TGTGATCTCGTTCATCAAATGACAA 59.300 36.000 0.00 0.00 39.39 3.18
4384 4535 5.237048 TGTGATCTCGTTCATCAAATGACA 58.763 37.500 0.00 0.00 39.39 3.58
4385 4536 5.784750 TGTGATCTCGTTCATCAAATGAC 57.215 39.130 0.00 0.00 39.39 3.06
4386 4537 6.108015 TGATGTGATCTCGTTCATCAAATGA 58.892 36.000 0.00 0.00 42.01 2.57
4387 4538 6.354039 TGATGTGATCTCGTTCATCAAATG 57.646 37.500 0.00 0.00 42.01 2.32
4388 4539 7.563888 AATGATGTGATCTCGTTCATCAAAT 57.436 32.000 10.02 4.59 45.83 2.32
4389 4540 6.990341 AATGATGTGATCTCGTTCATCAAA 57.010 33.333 10.02 0.85 45.83 2.69
4390 4541 6.703165 CCTAATGATGTGATCTCGTTCATCAA 59.297 38.462 10.02 7.86 45.83 2.57
4391 4542 6.040842 TCCTAATGATGTGATCTCGTTCATCA 59.959 38.462 8.70 8.70 46.43 3.07
4392 4543 6.450545 TCCTAATGATGTGATCTCGTTCATC 58.549 40.000 11.28 9.42 37.68 2.92
4393 4544 6.266330 TCTCCTAATGATGTGATCTCGTTCAT 59.734 38.462 7.03 7.03 0.00 2.57
4394 4545 5.594317 TCTCCTAATGATGTGATCTCGTTCA 59.406 40.000 0.00 0.00 0.00 3.18
4395 4546 6.078202 TCTCCTAATGATGTGATCTCGTTC 57.922 41.667 0.00 0.00 0.00 3.95
4396 4547 6.471233 TTCTCCTAATGATGTGATCTCGTT 57.529 37.500 0.00 0.00 0.00 3.85
4397 4548 6.266330 TCATTCTCCTAATGATGTGATCTCGT 59.734 38.462 0.00 0.00 32.21 4.18
4398 4549 6.685657 TCATTCTCCTAATGATGTGATCTCG 58.314 40.000 0.00 0.00 32.21 4.04
4407 4558 7.166851 GTCCATCACATCATTCTCCTAATGAT 58.833 38.462 7.28 7.28 45.40 2.45
4408 4559 6.100134 TGTCCATCACATCATTCTCCTAATGA 59.900 38.462 3.13 3.13 40.50 2.57
4409 4560 6.293698 TGTCCATCACATCATTCTCCTAATG 58.706 40.000 0.00 0.00 0.00 1.90
4410 4561 6.505048 TGTCCATCACATCATTCTCCTAAT 57.495 37.500 0.00 0.00 0.00 1.73
4411 4562 5.955961 TGTCCATCACATCATTCTCCTAA 57.044 39.130 0.00 0.00 0.00 2.69
4412 4563 5.603813 TCATGTCCATCACATCATTCTCCTA 59.396 40.000 0.00 0.00 44.60 2.94
4413 4564 4.411212 TCATGTCCATCACATCATTCTCCT 59.589 41.667 0.00 0.00 44.60 3.69
4414 4565 4.514441 GTCATGTCCATCACATCATTCTCC 59.486 45.833 0.00 0.00 44.60 3.71
4415 4566 4.514441 GGTCATGTCCATCACATCATTCTC 59.486 45.833 3.91 0.00 44.60 2.87
4416 4567 4.458397 GGTCATGTCCATCACATCATTCT 58.542 43.478 3.91 0.00 44.60 2.40
4417 4568 3.567164 GGGTCATGTCCATCACATCATTC 59.433 47.826 11.23 0.00 44.60 2.67
4418 4569 3.053470 TGGGTCATGTCCATCACATCATT 60.053 43.478 11.23 0.00 44.60 2.57
4419 4570 2.510800 TGGGTCATGTCCATCACATCAT 59.489 45.455 11.23 0.00 44.60 2.45
4420 4571 1.914798 TGGGTCATGTCCATCACATCA 59.085 47.619 11.23 0.00 44.60 3.07
4421 4572 2.715749 TGGGTCATGTCCATCACATC 57.284 50.000 11.23 0.00 44.60 3.06
4427 4578 0.918983 AACGGATGGGTCATGTCCAT 59.081 50.000 18.47 18.47 46.73 3.41
4428 4579 1.484653 CTAACGGATGGGTCATGTCCA 59.515 52.381 11.23 11.49 38.82 4.02
4429 4580 1.810412 GCTAACGGATGGGTCATGTCC 60.810 57.143 0.00 0.00 0.00 4.02
4430 4581 1.139058 AGCTAACGGATGGGTCATGTC 59.861 52.381 0.00 0.00 0.00 3.06
4431 4582 1.204146 AGCTAACGGATGGGTCATGT 58.796 50.000 0.00 0.00 0.00 3.21
4432 4583 2.332063 AAGCTAACGGATGGGTCATG 57.668 50.000 0.00 0.00 0.00 3.07
4433 4584 2.224305 GCTAAGCTAACGGATGGGTCAT 60.224 50.000 0.00 0.00 0.00 3.06
4434 4585 1.138266 GCTAAGCTAACGGATGGGTCA 59.862 52.381 0.00 0.00 0.00 4.02
4435 4586 1.138266 TGCTAAGCTAACGGATGGGTC 59.862 52.381 0.00 0.00 0.00 4.46
4436 4587 1.200519 TGCTAAGCTAACGGATGGGT 58.799 50.000 0.00 0.00 0.00 4.51
4437 4588 2.550830 ATGCTAAGCTAACGGATGGG 57.449 50.000 0.00 0.00 0.00 4.00
4438 4589 5.237815 TCATAATGCTAAGCTAACGGATGG 58.762 41.667 0.00 0.00 0.00 3.51
4439 4590 6.237675 CGATCATAATGCTAAGCTAACGGATG 60.238 42.308 0.00 0.00 0.00 3.51
4440 4591 5.807520 CGATCATAATGCTAAGCTAACGGAT 59.192 40.000 0.00 0.00 0.00 4.18
4441 4592 5.161358 CGATCATAATGCTAAGCTAACGGA 58.839 41.667 0.00 0.00 0.00 4.69
4442 4593 4.923871 ACGATCATAATGCTAAGCTAACGG 59.076 41.667 0.00 0.00 0.00 4.44
4443 4594 6.453643 AACGATCATAATGCTAAGCTAACG 57.546 37.500 0.00 0.00 0.00 3.18
4444 4595 8.294341 TGTAACGATCATAATGCTAAGCTAAC 57.706 34.615 0.00 0.00 0.00 2.34
4445 4596 8.141909 ACTGTAACGATCATAATGCTAAGCTAA 58.858 33.333 0.00 0.00 0.00 3.09
4446 4597 7.658261 ACTGTAACGATCATAATGCTAAGCTA 58.342 34.615 0.00 0.00 0.00 3.32
4447 4598 6.516718 ACTGTAACGATCATAATGCTAAGCT 58.483 36.000 0.00 0.00 0.00 3.74
4448 4599 6.771188 ACTGTAACGATCATAATGCTAAGC 57.229 37.500 0.00 0.00 0.00 3.09
4449 4600 8.817100 TGAAACTGTAACGATCATAATGCTAAG 58.183 33.333 0.00 0.00 0.00 2.18
4450 4601 8.710835 TGAAACTGTAACGATCATAATGCTAA 57.289 30.769 0.00 0.00 0.00 3.09
4451 4602 8.887036 ATGAAACTGTAACGATCATAATGCTA 57.113 30.769 0.00 0.00 0.00 3.49
4452 4603 7.792374 ATGAAACTGTAACGATCATAATGCT 57.208 32.000 0.00 0.00 0.00 3.79
4453 4604 7.096885 GCAATGAAACTGTAACGATCATAATGC 60.097 37.037 0.00 0.00 30.90 3.56
4454 4605 8.124823 AGCAATGAAACTGTAACGATCATAATG 58.875 33.333 0.00 0.00 30.90 1.90
4455 4606 8.213518 AGCAATGAAACTGTAACGATCATAAT 57.786 30.769 0.00 0.00 30.90 1.28
4456 4607 7.609760 AGCAATGAAACTGTAACGATCATAA 57.390 32.000 0.00 0.00 30.90 1.90
4457 4608 7.979537 AGTAGCAATGAAACTGTAACGATCATA 59.020 33.333 0.00 0.00 30.90 2.15
4458 4609 6.818644 AGTAGCAATGAAACTGTAACGATCAT 59.181 34.615 0.00 0.00 32.36 2.45
4459 4610 6.090763 CAGTAGCAATGAAACTGTAACGATCA 59.909 38.462 7.10 0.00 0.00 2.92
4460 4611 6.470160 CAGTAGCAATGAAACTGTAACGATC 58.530 40.000 7.10 0.00 0.00 3.69
4461 4612 5.163854 GCAGTAGCAATGAAACTGTAACGAT 60.164 40.000 14.11 0.00 41.58 3.73
4462 4613 4.151689 GCAGTAGCAATGAAACTGTAACGA 59.848 41.667 14.11 0.00 41.58 3.85
4463 4614 4.152402 AGCAGTAGCAATGAAACTGTAACG 59.848 41.667 14.11 0.00 45.49 3.18
4464 4615 5.613358 AGCAGTAGCAATGAAACTGTAAC 57.387 39.130 14.11 2.11 45.49 2.50
4465 4616 7.331026 AGATAGCAGTAGCAATGAAACTGTAA 58.669 34.615 14.11 6.04 45.49 2.41
4466 4617 6.878317 AGATAGCAGTAGCAATGAAACTGTA 58.122 36.000 14.11 7.97 45.49 2.74
4467 4618 5.738909 AGATAGCAGTAGCAATGAAACTGT 58.261 37.500 14.11 6.54 45.49 3.55
4468 4619 6.314648 TGAAGATAGCAGTAGCAATGAAACTG 59.685 38.462 9.99 9.99 45.49 3.16
4469 4620 6.409704 TGAAGATAGCAGTAGCAATGAAACT 58.590 36.000 0.00 0.00 45.49 2.66
4470 4621 6.668541 TGAAGATAGCAGTAGCAATGAAAC 57.331 37.500 0.00 0.00 45.49 2.78
4471 4622 8.830580 GTTATGAAGATAGCAGTAGCAATGAAA 58.169 33.333 0.00 0.00 45.49 2.69
4472 4623 8.206867 AGTTATGAAGATAGCAGTAGCAATGAA 58.793 33.333 0.00 0.00 45.49 2.57
4473 4624 7.730084 AGTTATGAAGATAGCAGTAGCAATGA 58.270 34.615 0.00 0.00 45.49 2.57
4474 4625 7.959689 AGTTATGAAGATAGCAGTAGCAATG 57.040 36.000 0.00 0.00 45.49 2.82
4490 4641 9.817809 GTCTGAGGAACATGTATAAGTTATGAA 57.182 33.333 0.00 0.00 0.00 2.57
4491 4642 9.201989 AGTCTGAGGAACATGTATAAGTTATGA 57.798 33.333 0.00 0.00 0.00 2.15
4495 4646 9.201989 TCATAGTCTGAGGAACATGTATAAGTT 57.798 33.333 0.00 0.00 0.00 2.66
4496 4647 8.768501 TCATAGTCTGAGGAACATGTATAAGT 57.231 34.615 0.00 0.00 0.00 2.24
4511 4662 6.239430 GGGAGTTGCATAATCTCATAGTCTGA 60.239 42.308 0.00 0.00 0.00 3.27
4512 4663 5.931146 GGGAGTTGCATAATCTCATAGTCTG 59.069 44.000 0.00 0.00 0.00 3.51
4513 4664 5.279206 CGGGAGTTGCATAATCTCATAGTCT 60.279 44.000 0.00 0.00 0.00 3.24
4514 4665 4.926238 CGGGAGTTGCATAATCTCATAGTC 59.074 45.833 0.00 0.00 0.00 2.59
4515 4666 4.588951 TCGGGAGTTGCATAATCTCATAGT 59.411 41.667 0.00 0.00 0.00 2.12
4516 4667 5.139435 TCGGGAGTTGCATAATCTCATAG 57.861 43.478 0.00 0.00 0.00 2.23
4517 4668 5.545063 TTCGGGAGTTGCATAATCTCATA 57.455 39.130 0.00 0.00 0.00 2.15
4518 4669 4.422073 TTCGGGAGTTGCATAATCTCAT 57.578 40.909 0.00 0.00 0.00 2.90
4519 4670 3.904800 TTCGGGAGTTGCATAATCTCA 57.095 42.857 0.00 0.00 0.00 3.27
4520 4671 4.691216 GGTATTCGGGAGTTGCATAATCTC 59.309 45.833 0.00 0.00 0.00 2.75
4521 4672 4.642429 GGTATTCGGGAGTTGCATAATCT 58.358 43.478 0.00 0.00 0.00 2.40
4522 4673 3.432252 CGGTATTCGGGAGTTGCATAATC 59.568 47.826 0.00 0.00 34.75 1.75
4523 4674 3.399330 CGGTATTCGGGAGTTGCATAAT 58.601 45.455 0.00 0.00 34.75 1.28
4524 4675 2.828877 CGGTATTCGGGAGTTGCATAA 58.171 47.619 0.00 0.00 34.75 1.90
4525 4676 2.519377 CGGTATTCGGGAGTTGCATA 57.481 50.000 0.00 0.00 34.75 3.14
4526 4677 3.379650 CGGTATTCGGGAGTTGCAT 57.620 52.632 0.00 0.00 34.75 3.96
4527 4678 4.924019 CGGTATTCGGGAGTTGCA 57.076 55.556 0.00 0.00 34.75 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.