Multiple sequence alignment - TraesCS6B01G315400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G315400 chr6B 100.000 4242 0 0 1 4242 563321203 563325444 0.000000e+00 7834.0
1 TraesCS6B01G315400 chr6B 90.323 62 5 1 266 327 504603153 504603093 3.520000e-11 80.5
2 TraesCS6B01G315400 chr6D 92.430 1136 67 11 2296 3420 377223394 377224521 0.000000e+00 1604.0
3 TraesCS6B01G315400 chr6D 93.668 758 35 5 999 1755 377222202 377222947 0.000000e+00 1122.0
4 TraesCS6B01G315400 chr6D 91.654 683 37 9 319 996 377221485 377222152 0.000000e+00 928.0
5 TraesCS6B01G315400 chr6D 89.396 679 49 6 3576 4242 377224515 377225182 0.000000e+00 833.0
6 TraesCS6B01G315400 chr6D 89.802 353 33 3 1844 2195 377222942 377223292 2.330000e-122 449.0
7 TraesCS6B01G315400 chr6D 84.906 265 21 9 1 262 377221246 377221494 2.530000e-62 250.0
8 TraesCS6B01G315400 chr6D 88.571 70 5 1 266 332 406205687 406205756 9.780000e-12 82.4
9 TraesCS6B01G315400 chr6D 90.323 62 3 1 266 324 406205746 406205685 1.260000e-10 78.7
10 TraesCS6B01G315400 chr6D 88.710 62 2 3 266 324 86643298 86643239 2.120000e-08 71.3
11 TraesCS6B01G315400 chr6D 84.127 63 9 1 266 328 317011515 317011454 4.580000e-05 60.2
12 TraesCS6B01G315400 chr6A 95.260 886 41 1 698 1582 518667165 518668050 0.000000e+00 1402.0
13 TraesCS6B01G315400 chr6A 86.718 1167 101 35 2296 3420 518669102 518670256 0.000000e+00 1247.0
14 TraesCS6B01G315400 chr6A 87.153 685 50 10 3576 4242 518670250 518670914 0.000000e+00 743.0
15 TraesCS6B01G315400 chr6A 90.074 403 38 2 1794 2195 518668600 518669001 4.860000e-144 521.0
16 TraesCS6B01G315400 chr6A 85.714 308 21 7 362 666 518666888 518667175 1.920000e-78 303.0
17 TraesCS6B01G315400 chr6A 90.476 63 1 3 266 324 509276957 509277018 1.260000e-10 78.7
18 TraesCS6B01G315400 chr4D 95.152 165 8 0 3416 3580 461778855 461778691 1.170000e-65 261.0
19 TraesCS6B01G315400 chr4D 100.000 35 0 0 295 329 15425325 15425291 9.850000e-07 65.8
20 TraesCS6B01G315400 chr4D 85.714 70 1 3 266 334 120832566 120832627 9.850000e-07 65.8
21 TraesCS6B01G315400 chr4D 82.857 70 10 2 258 327 6594595 6594662 1.270000e-05 62.1
22 TraesCS6B01G315400 chr4D 97.222 36 1 0 258 293 418584461 418584426 1.270000e-05 62.1
23 TraesCS6B01G315400 chr4D 100.000 30 0 0 264 293 121846906 121846877 5.930000e-04 56.5
24 TraesCS6B01G315400 chr4D 92.308 39 2 1 297 335 466837200 466837237 2.000000e-03 54.7
25 TraesCS6B01G315400 chr4D 92.105 38 2 1 256 293 113929783 113929747 8.000000e-03 52.8
26 TraesCS6B01G315400 chr4D 96.774 31 1 0 297 327 472879887 472879857 8.000000e-03 52.8
27 TraesCS6B01G315400 chr2D 93.258 178 10 2 3412 3587 161907022 161906845 1.170000e-65 261.0
28 TraesCS6B01G315400 chr2D 91.848 184 11 4 3415 3597 576852267 576852447 1.960000e-63 254.0
29 TraesCS6B01G315400 chr2D 93.939 66 3 1 260 325 404795519 404795455 9.710000e-17 99.0
30 TraesCS6B01G315400 chr2D 90.769 65 5 1 263 327 404795455 404795518 7.560000e-13 86.1
31 TraesCS6B01G315400 chr3D 95.152 165 7 1 3417 3580 217587560 217587724 4.210000e-65 259.0
32 TraesCS6B01G315400 chr2B 94.643 168 7 2 3417 3583 200902249 200902083 4.210000e-65 259.0
33 TraesCS6B01G315400 chr2B 91.803 61 5 0 264 324 291851475 291851535 7.560000e-13 86.1
34 TraesCS6B01G315400 chr1A 93.642 173 10 1 3414 3585 113537980 113538152 1.510000e-64 257.0
35 TraesCS6B01G315400 chr1A 90.476 63 5 1 266 327 164458459 164458521 9.780000e-12 82.4
36 TraesCS6B01G315400 chr1A 88.235 68 4 2 259 323 399497071 399497137 1.260000e-10 78.7
37 TraesCS6B01G315400 chr1A 89.655 58 4 2 266 322 550888585 550888529 5.880000e-09 73.1
38 TraesCS6B01G315400 chr7B 91.444 187 11 5 3417 3600 240869581 240869765 7.040000e-63 252.0
39 TraesCS6B01G315400 chr3A 93.529 170 9 2 3412 3580 89152580 89152748 7.040000e-63 252.0
40 TraesCS6B01G315400 chr1D 90.155 193 16 3 3410 3600 444346338 444346147 9.110000e-62 248.0
41 TraesCS6B01G315400 chr1D 88.235 68 3 1 261 328 447913105 447913167 4.550000e-10 76.8
42 TraesCS6B01G315400 chr1D 90.000 60 5 1 266 324 484117721 484117780 4.550000e-10 76.8
43 TraesCS6B01G315400 chr1D 88.710 62 1 4 266 324 404066320 404066378 2.120000e-08 71.3
44 TraesCS6B01G315400 chr1B 95.833 72 1 2 2240 2310 94575440 94575370 9.640000e-22 115.0
45 TraesCS6B01G315400 chrUn 94.595 74 2 2 2240 2313 292980969 292981040 3.470000e-21 113.0
46 TraesCS6B01G315400 chrUn 90.323 62 1 3 266 327 99391289 99391345 4.550000e-10 76.8
47 TraesCS6B01G315400 chrUn 85.526 76 8 2 260 332 105371897 105371822 4.550000e-10 76.8
48 TraesCS6B01G315400 chrUn 87.302 63 4 2 266 324 30123188 30123126 7.610000e-08 69.4
49 TraesCS6B01G315400 chrUn 95.000 40 2 0 295 334 117380297 117380336 3.540000e-06 63.9
50 TraesCS6B01G315400 chrUn 100.000 33 0 0 295 327 37028940 37028908 1.270000e-05 62.1
51 TraesCS6B01G315400 chrUn 100.000 32 0 0 295 326 35125934 35125965 4.580000e-05 60.2
52 TraesCS6B01G315400 chrUn 100.000 32 0 0 298 329 75852883 75852914 4.580000e-05 60.2
53 TraesCS6B01G315400 chrUn 100.000 32 0 0 298 329 284680004 284680035 4.580000e-05 60.2
54 TraesCS6B01G315400 chrUn 100.000 31 0 0 297 327 36436948 36436978 1.650000e-04 58.4
55 TraesCS6B01G315400 chrUn 94.595 37 0 2 259 293 287061834 287061798 5.930000e-04 56.5
56 TraesCS6B01G315400 chrUn 96.875 32 1 0 262 293 289154536 289154505 2.000000e-03 54.7
57 TraesCS6B01G315400 chrUn 96.875 32 1 0 262 293 350900265 350900296 2.000000e-03 54.7
58 TraesCS6B01G315400 chrUn 100.000 28 0 0 266 293 15903392 15903365 8.000000e-03 52.8
59 TraesCS6B01G315400 chrUn 100.000 28 0 0 266 293 26701826 26701853 8.000000e-03 52.8
60 TraesCS6B01G315400 chrUn 100.000 28 0 0 266 293 35299455 35299482 8.000000e-03 52.8
61 TraesCS6B01G315400 chrUn 94.286 35 1 1 260 293 104889326 104889292 8.000000e-03 52.8
62 TraesCS6B01G315400 chrUn 100.000 28 0 0 266 293 367489846 367489873 8.000000e-03 52.8
63 TraesCS6B01G315400 chr5A 94.595 74 2 2 2240 2312 621750576 621750504 3.470000e-21 113.0
64 TraesCS6B01G315400 chr5A 86.486 74 3 4 256 324 547647462 547647533 1.640000e-09 75.0
65 TraesCS6B01G315400 chr4B 93.506 77 3 2 2240 2314 154242190 154242114 3.470000e-21 113.0
66 TraesCS6B01G315400 chr4B 97.143 35 1 0 4110 4144 562623637 562623603 4.580000e-05 60.2
67 TraesCS6B01G315400 chr3B 93.506 77 4 1 2240 2316 400338449 400338374 3.470000e-21 113.0
68 TraesCS6B01G315400 chr3B 93.421 76 3 2 2240 2313 434671573 434671648 1.250000e-20 111.0
69 TraesCS6B01G315400 chr3B 91.176 68 5 1 257 324 554900996 554901062 1.620000e-14 91.6
70 TraesCS6B01G315400 chr3B 91.803 61 5 0 264 324 303333368 303333308 7.560000e-13 86.1
71 TraesCS6B01G315400 chr3B 86.667 60 6 2 4110 4168 605295446 605295504 9.850000e-07 65.8
72 TraesCS6B01G315400 chr4A 93.421 76 3 2 2240 2314 739032305 739032379 1.250000e-20 111.0
73 TraesCS6B01G315400 chr4A 85.000 60 7 2 4110 4168 648905484 648905542 4.580000e-05 60.2
74 TraesCS6B01G315400 chr2A 93.421 76 3 2 2240 2314 527466005 527466079 1.250000e-20 111.0
75 TraesCS6B01G315400 chr5D 91.463 82 4 3 2240 2321 220689890 220689812 4.480000e-20 110.0
76 TraesCS6B01G315400 chr5D 89.189 74 8 0 4111 4184 495166499 495166572 4.520000e-15 93.5
77 TraesCS6B01G315400 chr5D 90.323 62 4 2 265 324 558270691 558270630 3.520000e-11 80.5
78 TraesCS6B01G315400 chr5D 85.526 76 3 5 255 324 41140042 41139969 5.880000e-09 73.1
79 TraesCS6B01G315400 chr5B 92.982 57 3 1 266 322 684772514 684772459 9.780000e-12 82.4
80 TraesCS6B01G315400 chr5B 97.436 39 0 1 4110 4147 427279361 427279399 9.850000e-07 65.8
81 TraesCS6B01G315400 chr5B 86.441 59 6 2 4111 4168 662011226 662011169 3.540000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G315400 chr6B 563321203 563325444 4241 False 7834.000000 7834 100.000000 1 4242 1 chr6B.!!$F1 4241
1 TraesCS6B01G315400 chr6D 377221246 377225182 3936 False 864.333333 1604 90.309333 1 4242 6 chr6D.!!$F2 4241
2 TraesCS6B01G315400 chr6A 518666888 518670914 4026 False 843.200000 1402 88.983800 362 4242 5 chr6A.!!$F2 3880

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
185 186 0.243907 TCTCTCTGGTTTTCGGAGCG 59.756 55.0 0.00 0.00 46.09 5.03 F
1679 1736 0.030369 GCTCATAGCCTGTTGCATGC 59.970 55.0 11.82 11.82 44.83 4.06 F
2161 2665 0.097674 GCCAGCTGCTGATTGTAACG 59.902 55.0 30.10 12.06 36.87 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1758 1819 0.099436 CTGCAGAAAAGGTATGCGCC 59.901 55.0 8.42 0.0 42.92 6.53 R
2517 3097 0.036577 CAGGAACACAGAGGCTGGAG 60.037 60.0 0.00 0.0 35.51 3.86 R
4046 4688 0.393808 GCCTTACCCGAAGAATGGCA 60.394 55.0 0.00 0.0 37.33 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 2.573369 CCATGCTTGCTTAGATGCTCT 58.427 47.619 0.00 0.00 0.00 4.09
110 111 0.394938 TGCTTCGTGCCTTCAGGTTA 59.605 50.000 0.00 0.00 42.00 2.85
121 122 6.174049 GTGCCTTCAGGTTAATACTTCTCTT 58.826 40.000 0.00 0.00 37.57 2.85
122 123 6.655425 GTGCCTTCAGGTTAATACTTCTCTTT 59.345 38.462 0.00 0.00 37.57 2.52
123 124 7.175119 GTGCCTTCAGGTTAATACTTCTCTTTT 59.825 37.037 0.00 0.00 37.57 2.27
138 139 7.544622 ACTTCTCTTTTCCTTTTTGGTGTTAC 58.455 34.615 0.00 0.00 37.07 2.50
139 140 7.177744 ACTTCTCTTTTCCTTTTTGGTGTTACA 59.822 33.333 0.00 0.00 37.07 2.41
142 143 8.032451 TCTCTTTTCCTTTTTGGTGTTACAAAG 58.968 33.333 0.00 0.00 40.97 2.77
144 145 7.600752 TCTTTTCCTTTTTGGTGTTACAAAGTG 59.399 33.333 0.00 0.00 40.97 3.16
145 146 4.749976 TCCTTTTTGGTGTTACAAAGTGC 58.250 39.130 0.00 0.00 40.97 4.40
146 147 4.220821 TCCTTTTTGGTGTTACAAAGTGCA 59.779 37.500 0.00 0.00 40.97 4.57
147 148 5.105146 TCCTTTTTGGTGTTACAAAGTGCAT 60.105 36.000 0.00 0.00 40.97 3.96
148 149 5.584251 CCTTTTTGGTGTTACAAAGTGCATT 59.416 36.000 0.00 0.00 40.97 3.56
149 150 6.238076 CCTTTTTGGTGTTACAAAGTGCATTC 60.238 38.462 0.00 0.00 40.97 2.67
150 151 5.590530 TTTGGTGTTACAAAGTGCATTCT 57.409 34.783 0.00 0.00 35.57 2.40
151 152 6.701145 TTTGGTGTTACAAAGTGCATTCTA 57.299 33.333 0.00 0.00 35.57 2.10
152 153 5.940192 TGGTGTTACAAAGTGCATTCTAG 57.060 39.130 0.00 0.00 0.00 2.43
153 154 4.759693 TGGTGTTACAAAGTGCATTCTAGG 59.240 41.667 0.00 0.00 0.00 3.02
154 155 4.156008 GGTGTTACAAAGTGCATTCTAGGG 59.844 45.833 0.00 0.00 0.00 3.53
155 156 4.760204 GTGTTACAAAGTGCATTCTAGGGT 59.240 41.667 0.00 0.00 0.00 4.34
156 157 5.240844 GTGTTACAAAGTGCATTCTAGGGTT 59.759 40.000 0.00 0.00 0.00 4.11
157 158 5.240623 TGTTACAAAGTGCATTCTAGGGTTG 59.759 40.000 0.00 0.00 0.00 3.77
158 159 3.832527 ACAAAGTGCATTCTAGGGTTGT 58.167 40.909 0.00 0.00 0.00 3.32
159 160 3.821033 ACAAAGTGCATTCTAGGGTTGTC 59.179 43.478 0.00 0.00 0.00 3.18
160 161 4.074970 CAAAGTGCATTCTAGGGTTGTCT 58.925 43.478 0.00 0.00 0.00 3.41
161 162 3.618690 AGTGCATTCTAGGGTTGTCTC 57.381 47.619 0.00 0.00 0.00 3.36
162 163 3.177228 AGTGCATTCTAGGGTTGTCTCT 58.823 45.455 0.00 0.00 0.00 3.10
163 164 3.196685 AGTGCATTCTAGGGTTGTCTCTC 59.803 47.826 0.00 0.00 0.00 3.20
164 165 2.166459 TGCATTCTAGGGTTGTCTCTCG 59.834 50.000 0.00 0.00 0.00 4.04
165 166 2.482142 GCATTCTAGGGTTGTCTCTCGG 60.482 54.545 0.00 0.00 0.00 4.63
166 167 2.599408 TTCTAGGGTTGTCTCTCGGT 57.401 50.000 0.00 0.00 0.00 4.69
167 168 2.125773 TCTAGGGTTGTCTCTCGGTC 57.874 55.000 0.00 0.00 0.00 4.79
174 175 1.470890 GTTGTCTCTCGGTCTCTCTGG 59.529 57.143 0.00 0.00 0.00 3.86
185 186 0.243907 TCTCTCTGGTTTTCGGAGCG 59.756 55.000 0.00 0.00 46.09 5.03
218 220 7.259290 TCAGTGTTGACTCCAATTTAAGTTC 57.741 36.000 0.00 0.00 34.39 3.01
262 266 9.472361 TCTTTGTATGCTTTACGGAGAATATAC 57.528 33.333 0.00 0.00 0.00 1.47
263 267 9.477484 CTTTGTATGCTTTACGGAGAATATACT 57.523 33.333 0.00 0.00 0.00 2.12
264 268 9.826574 TTTGTATGCTTTACGGAGAATATACTT 57.173 29.630 0.00 0.00 0.00 2.24
265 269 9.472361 TTGTATGCTTTACGGAGAATATACTTC 57.528 33.333 0.00 0.00 0.00 3.01
266 270 8.857098 TGTATGCTTTACGGAGAATATACTTCT 58.143 33.333 0.00 0.00 0.00 2.85
267 271 9.344309 GTATGCTTTACGGAGAATATACTTCTC 57.656 37.037 12.72 12.72 43.08 2.87
279 283 9.357161 GAGAATATACTTCTCCCTCTGTAAAGA 57.643 37.037 11.10 0.00 39.11 2.52
280 284 9.716556 AGAATATACTTCTCCCTCTGTAAAGAA 57.283 33.333 0.00 0.00 0.00 2.52
290 294 8.643324 TCTCCCTCTGTAAAGAAATATAAGAGC 58.357 37.037 0.00 0.00 0.00 4.09
291 295 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
292 296 7.069578 TCCCTCTGTAAAGAAATATAAGAGCGT 59.930 37.037 0.00 0.00 0.00 5.07
293 297 7.169982 CCCTCTGTAAAGAAATATAAGAGCGTG 59.830 40.741 0.00 0.00 0.00 5.34
294 298 7.921214 CCTCTGTAAAGAAATATAAGAGCGTGA 59.079 37.037 0.00 0.00 0.00 4.35
295 299 9.469807 CTCTGTAAAGAAATATAAGAGCGTGAT 57.530 33.333 0.00 0.00 0.00 3.06
296 300 9.249457 TCTGTAAAGAAATATAAGAGCGTGATG 57.751 33.333 0.00 0.00 0.00 3.07
297 301 7.851508 TGTAAAGAAATATAAGAGCGTGATGC 58.148 34.615 0.00 0.00 46.98 3.91
314 318 7.004225 GCGTGATGCTCTTATATTTCTTTACG 58.996 38.462 0.00 0.00 41.73 3.18
315 319 7.502339 CGTGATGCTCTTATATTTCTTTACGG 58.498 38.462 0.00 0.00 0.00 4.02
316 320 7.381408 CGTGATGCTCTTATATTTCTTTACGGA 59.619 37.037 0.00 0.00 0.00 4.69
317 321 8.704234 GTGATGCTCTTATATTTCTTTACGGAG 58.296 37.037 0.00 0.00 0.00 4.63
318 322 7.872993 TGATGCTCTTATATTTCTTTACGGAGG 59.127 37.037 0.00 0.00 0.00 4.30
319 323 6.522054 TGCTCTTATATTTCTTTACGGAGGG 58.478 40.000 0.00 0.00 0.00 4.30
320 324 6.325545 TGCTCTTATATTTCTTTACGGAGGGA 59.674 38.462 0.00 0.00 0.00 4.20
321 325 6.869388 GCTCTTATATTTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
322 326 7.471679 GCTCTTATATTTCTTTACGGAGGGAGT 60.472 40.741 0.00 0.00 0.00 3.85
323 327 9.075678 CTCTTATATTTCTTTACGGAGGGAGTA 57.924 37.037 0.00 0.00 0.00 2.59
324 328 9.075678 TCTTATATTTCTTTACGGAGGGAGTAG 57.924 37.037 0.00 0.00 0.00 2.57
325 329 8.773033 TTATATTTCTTTACGGAGGGAGTAGT 57.227 34.615 0.00 0.00 0.00 2.73
326 330 9.866655 TTATATTTCTTTACGGAGGGAGTAGTA 57.133 33.333 0.00 0.00 0.00 1.82
327 331 6.712179 ATTTCTTTACGGAGGGAGTAGTAG 57.288 41.667 0.00 0.00 0.00 2.57
337 341 7.874252 ACGGAGGGAGTAGTAGATATGATTAT 58.126 38.462 0.00 0.00 0.00 1.28
438 442 9.353999 CAGTTGTACTTTTGCTTTTAAAACTCT 57.646 29.630 0.00 0.00 0.00 3.24
483 487 5.878406 ATCACCTCGGATTCTTTATGTCT 57.122 39.130 0.00 0.00 0.00 3.41
518 522 2.127708 AGGTGGACTCTGTCAAAACCT 58.872 47.619 10.92 10.92 37.48 3.50
521 525 3.181458 GGTGGACTCTGTCAAAACCTACA 60.181 47.826 0.07 0.00 32.81 2.74
527 531 6.590677 GGACTCTGTCAAAACCTACATAAGTC 59.409 42.308 0.00 0.00 37.46 3.01
571 575 5.163468 TGTTACCTAAATATGGACGCGGTTA 60.163 40.000 12.47 0.00 0.00 2.85
614 618 6.230472 TGTGTTGTTACTAGCTGATGTCAAT 58.770 36.000 0.00 0.00 0.00 2.57
893 898 6.387041 TCGGTGATAACGATCTCTTGTATT 57.613 37.500 0.00 0.00 35.12 1.89
900 905 8.892723 TGATAACGATCTCTTGTATTTGCATTT 58.107 29.630 0.00 0.00 32.79 2.32
939 948 6.234177 ACCCTTCACTGAATTGAACTAAGAG 58.766 40.000 0.00 0.00 32.02 2.85
1029 1085 3.450457 TGGGTGCTCTTTGTGATTTTTGT 59.550 39.130 0.00 0.00 0.00 2.83
1368 1424 3.797546 GCTGCTGAGCCGAACTGC 61.798 66.667 0.23 0.00 39.57 4.40
1427 1483 1.737236 TGTCAGTAATCATTGTGGCGC 59.263 47.619 0.00 0.00 0.00 6.53
1438 1494 0.323302 TTGTGGCGCTCAACAGGATA 59.677 50.000 7.64 0.00 0.00 2.59
1473 1529 5.641209 GGATATGGCTAACACATCACTCATC 59.359 44.000 0.00 0.00 34.63 2.92
1539 1595 1.568504 ATCTTCGGCCACTTCCTACA 58.431 50.000 2.24 0.00 0.00 2.74
1548 1604 1.278985 CCACTTCCTACACATCAGCCA 59.721 52.381 0.00 0.00 0.00 4.75
1563 1619 1.129998 CAGCCAGCTCAATCAGTTTCG 59.870 52.381 0.00 0.00 0.00 3.46
1589 1645 4.041198 GGCACCTAAGGTACAATATGGCTA 59.959 45.833 0.00 0.00 32.11 3.93
1602 1658 6.435164 ACAATATGGCTAATCATATTCCCCC 58.565 40.000 7.01 0.00 44.11 5.40
1604 1660 4.598036 ATGGCTAATCATATTCCCCCAG 57.402 45.455 0.00 0.00 0.00 4.45
1613 1670 9.759473 CTAATCATATTCCCCCAGAAAACATAT 57.241 33.333 0.00 0.00 38.21 1.78
1676 1733 0.614812 TCAGCTCATAGCCTGTTGCA 59.385 50.000 0.00 0.00 43.77 4.08
1677 1734 1.211212 TCAGCTCATAGCCTGTTGCAT 59.789 47.619 0.00 0.00 43.77 3.96
1678 1735 1.333931 CAGCTCATAGCCTGTTGCATG 59.666 52.381 0.00 0.00 43.77 4.06
1679 1736 0.030369 GCTCATAGCCTGTTGCATGC 59.970 55.000 11.82 11.82 44.83 4.06
1680 1737 1.385528 CTCATAGCCTGTTGCATGCA 58.614 50.000 18.46 18.46 44.83 3.96
1681 1738 1.746787 CTCATAGCCTGTTGCATGCAA 59.253 47.619 28.80 28.80 44.83 4.08
1722 1783 7.928307 AATGTAGTCAAACATTAGTCATGCT 57.072 32.000 0.55 0.00 45.84 3.79
1728 1789 6.591834 AGTCAAACATTAGTCATGCTGTAGAC 59.408 38.462 0.00 0.00 36.14 2.59
1734 1795 2.969990 AGTCATGCTGTAGACTTGCAG 58.030 47.619 0.00 3.24 42.12 4.41
1760 1821 5.222631 GCAGTAAAATGCACCAATATAGGC 58.777 41.667 0.00 0.00 45.77 3.93
1767 1828 1.737793 GCACCAATATAGGCGCATACC 59.262 52.381 10.83 0.00 36.72 2.73
1769 1830 3.674997 CACCAATATAGGCGCATACCTT 58.325 45.455 10.83 0.32 41.50 3.50
1780 1841 0.457443 GCATACCTTTTCTGCAGGCC 59.543 55.000 15.13 0.00 34.32 5.19
1784 1845 1.720781 ACCTTTTCTGCAGGCCAATT 58.279 45.000 15.13 0.00 34.32 2.32
1788 1849 3.703052 CCTTTTCTGCAGGCCAATTATCT 59.297 43.478 15.13 0.00 0.00 1.98
1790 1851 5.337813 CCTTTTCTGCAGGCCAATTATCTTT 60.338 40.000 15.13 0.00 0.00 2.52
1798 2302 6.036470 GCAGGCCAATTATCTTTTCTTGTAC 58.964 40.000 5.01 0.00 0.00 2.90
1815 2319 6.402222 TCTTGTACTGTTGGCAAAATGTTTT 58.598 32.000 0.00 0.00 0.00 2.43
1821 2325 9.995957 GTACTGTTGGCAAAATGTTTTAAAAAT 57.004 25.926 0.00 0.00 0.00 1.82
1863 2367 8.348507 GGTCAAACAATTGCAATATTTTGGAAA 58.651 29.630 28.42 16.68 44.81 3.13
1869 2373 5.667539 TTGCAATATTTTGGAAATCGGGA 57.332 34.783 0.00 0.00 39.81 5.14
1883 2387 5.922544 GGAAATCGGGATCTTTTTATGCATG 59.077 40.000 10.16 0.00 0.00 4.06
1917 2421 4.000988 TCATAAAACAGCTTTCTCCGTCC 58.999 43.478 0.00 0.00 0.00 4.79
1921 2425 0.321996 ACAGCTTTCTCCGTCCCTTC 59.678 55.000 0.00 0.00 0.00 3.46
1924 2428 0.529378 GCTTTCTCCGTCCCTTCGTA 59.471 55.000 0.00 0.00 0.00 3.43
1969 2473 2.357154 GGTTGCATCATTCAGGTACCCT 60.357 50.000 8.74 0.00 0.00 4.34
2004 2508 3.251729 ACGATATGTTCAATGATGGCAGC 59.748 43.478 0.00 0.00 0.00 5.25
2032 2536 5.694231 TGAAAACTTCTGTGTGGATGATG 57.306 39.130 0.00 0.00 0.00 3.07
2033 2537 4.022935 TGAAAACTTCTGTGTGGATGATGC 60.023 41.667 0.00 0.00 0.00 3.91
2036 2540 2.014857 CTTCTGTGTGGATGATGCTGG 58.985 52.381 0.00 0.00 0.00 4.85
2061 2565 7.416022 GCCTGACATTTGAGAATTATGAAGAG 58.584 38.462 0.00 0.00 0.00 2.85
2076 2580 2.972713 TGAAGAGCTGTTTGGTACTCCT 59.027 45.455 0.00 0.00 34.23 3.69
2080 2584 2.037251 GAGCTGTTTGGTACTCCTCACA 59.963 50.000 0.00 0.00 34.23 3.58
2123 2627 5.499313 TGATGATGCTGGAATTGACAGTTA 58.501 37.500 8.15 0.54 38.22 2.24
2129 2633 4.278170 TGCTGGAATTGACAGTTACTTTGG 59.722 41.667 8.15 0.00 38.22 3.28
2158 2662 2.133281 AATGCCAGCTGCTGATTGTA 57.867 45.000 30.10 13.80 42.00 2.41
2161 2665 0.097674 GCCAGCTGCTGATTGTAACG 59.902 55.000 30.10 12.06 36.87 3.18
2171 2675 4.449743 TGCTGATTGTAACGAGGTTTGTAC 59.550 41.667 0.00 0.00 0.00 2.90
2181 2686 3.498397 ACGAGGTTTGTACTTTCTGCATG 59.502 43.478 0.00 0.00 0.00 4.06
2185 2690 6.568462 CGAGGTTTGTACTTTCTGCATGAAAT 60.568 38.462 0.00 5.76 42.96 2.17
2186 2691 7.360861 CGAGGTTTGTACTTTCTGCATGAAATA 60.361 37.037 0.00 5.09 42.96 1.40
2188 2693 8.806146 AGGTTTGTACTTTCTGCATGAAATATT 58.194 29.630 0.00 0.00 42.96 1.28
2203 2708 8.951243 GCATGAAATATTCTCTATTTACCTCCC 58.049 37.037 0.00 0.00 0.00 4.30
2204 2709 9.454859 CATGAAATATTCTCTATTTACCTCCCC 57.545 37.037 0.00 0.00 0.00 4.81
2206 2711 8.660435 TGAAATATTCTCTATTTACCTCCCCTG 58.340 37.037 0.00 0.00 0.00 4.45
2207 2712 7.575499 AATATTCTCTATTTACCTCCCCTGG 57.425 40.000 0.00 0.00 0.00 4.45
2208 2713 4.363546 TTCTCTATTTACCTCCCCTGGT 57.636 45.455 0.00 0.00 43.66 4.00
2209 2714 3.654273 TCTCTATTTACCTCCCCTGGTG 58.346 50.000 0.00 0.00 41.05 4.17
2210 2715 2.104963 CTCTATTTACCTCCCCTGGTGC 59.895 54.545 0.00 0.00 41.05 5.01
2211 2716 1.843851 CTATTTACCTCCCCTGGTGCA 59.156 52.381 0.00 0.00 41.05 4.57
2212 2717 1.308877 ATTTACCTCCCCTGGTGCAT 58.691 50.000 0.00 0.00 41.05 3.96
2213 2718 1.974028 TTTACCTCCCCTGGTGCATA 58.026 50.000 0.00 0.00 41.05 3.14
2214 2719 2.206322 TTACCTCCCCTGGTGCATAT 57.794 50.000 0.00 0.00 41.05 1.78
2215 2720 2.206322 TACCTCCCCTGGTGCATATT 57.794 50.000 0.00 0.00 41.05 1.28
2218 2797 2.034124 CCTCCCCTGGTGCATATTTTG 58.966 52.381 0.00 0.00 0.00 2.44
2234 2813 8.028354 TGCATATTTTGGAAGTTGTTATGTCAG 58.972 33.333 0.00 0.00 0.00 3.51
2235 2814 8.028938 GCATATTTTGGAAGTTGTTATGTCAGT 58.971 33.333 0.00 0.00 0.00 3.41
2236 2815 9.912634 CATATTTTGGAAGTTGTTATGTCAGTT 57.087 29.630 0.00 0.00 0.00 3.16
2238 2817 7.397892 TTTTGGAAGTTGTTATGTCAGTTCA 57.602 32.000 0.00 0.00 0.00 3.18
2239 2818 6.618287 TTGGAAGTTGTTATGTCAGTTCAG 57.382 37.500 0.00 0.00 0.00 3.02
2240 2819 5.063204 TGGAAGTTGTTATGTCAGTTCAGG 58.937 41.667 0.00 0.00 0.00 3.86
2241 2820 4.455877 GGAAGTTGTTATGTCAGTTCAGGG 59.544 45.833 0.00 0.00 0.00 4.45
2242 2821 4.706842 AGTTGTTATGTCAGTTCAGGGT 57.293 40.909 0.00 0.00 0.00 4.34
2243 2822 5.048846 AGTTGTTATGTCAGTTCAGGGTT 57.951 39.130 0.00 0.00 0.00 4.11
2244 2823 5.445964 AGTTGTTATGTCAGTTCAGGGTTT 58.554 37.500 0.00 0.00 0.00 3.27
2245 2824 5.531287 AGTTGTTATGTCAGTTCAGGGTTTC 59.469 40.000 0.00 0.00 0.00 2.78
2246 2825 5.042463 TGTTATGTCAGTTCAGGGTTTCA 57.958 39.130 0.00 0.00 0.00 2.69
2247 2826 5.630121 TGTTATGTCAGTTCAGGGTTTCAT 58.370 37.500 0.00 0.00 0.00 2.57
2248 2827 5.705441 TGTTATGTCAGTTCAGGGTTTCATC 59.295 40.000 0.00 0.00 0.00 2.92
2249 2828 4.647564 ATGTCAGTTCAGGGTTTCATCT 57.352 40.909 0.00 0.00 0.00 2.90
2250 2829 4.008074 TGTCAGTTCAGGGTTTCATCTC 57.992 45.455 0.00 0.00 0.00 2.75
2251 2830 3.648067 TGTCAGTTCAGGGTTTCATCTCT 59.352 43.478 0.00 0.00 0.00 3.10
2252 2831 4.838423 TGTCAGTTCAGGGTTTCATCTCTA 59.162 41.667 0.00 0.00 0.00 2.43
2253 2832 5.047021 TGTCAGTTCAGGGTTTCATCTCTAG 60.047 44.000 0.00 0.00 0.00 2.43
2254 2833 4.081420 TCAGTTCAGGGTTTCATCTCTAGC 60.081 45.833 0.00 0.00 0.00 3.42
2255 2834 3.198853 AGTTCAGGGTTTCATCTCTAGCC 59.801 47.826 0.00 0.00 0.00 3.93
2256 2835 3.121929 TCAGGGTTTCATCTCTAGCCT 57.878 47.619 0.00 0.00 40.24 4.58
2257 2836 4.265856 TCAGGGTTTCATCTCTAGCCTA 57.734 45.455 0.00 0.00 37.67 3.93
2258 2837 3.961408 TCAGGGTTTCATCTCTAGCCTAC 59.039 47.826 0.00 0.00 37.67 3.18
2259 2838 3.070302 CAGGGTTTCATCTCTAGCCTACC 59.930 52.174 0.00 0.00 37.67 3.18
2260 2839 2.369203 GGGTTTCATCTCTAGCCTACCC 59.631 54.545 0.00 0.00 37.41 3.69
2261 2840 2.369203 GGTTTCATCTCTAGCCTACCCC 59.631 54.545 0.00 0.00 0.00 4.95
2262 2841 3.039011 GTTTCATCTCTAGCCTACCCCA 58.961 50.000 0.00 0.00 0.00 4.96
2263 2842 3.414759 TTCATCTCTAGCCTACCCCAA 57.585 47.619 0.00 0.00 0.00 4.12
2264 2843 2.679082 TCATCTCTAGCCTACCCCAAC 58.321 52.381 0.00 0.00 0.00 3.77
2265 2844 2.247635 TCATCTCTAGCCTACCCCAACT 59.752 50.000 0.00 0.00 0.00 3.16
2266 2845 2.942604 TCTCTAGCCTACCCCAACTT 57.057 50.000 0.00 0.00 0.00 2.66
2267 2846 2.467880 TCTCTAGCCTACCCCAACTTG 58.532 52.381 0.00 0.00 0.00 3.16
2268 2847 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
2269 2848 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
2270 2849 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
2271 2850 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
2282 2861 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
2283 2862 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
2284 2863 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
2285 2864 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
2286 2865 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
2287 2866 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
2288 2867 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
2289 2868 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
2290 2869 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
2291 2870 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
2292 2871 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
2293 2872 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
2294 2873 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
2295 2874 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
2296 2875 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
2297 2876 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
2298 2877 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
2299 2878 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
2300 2879 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
2301 2880 5.140747 AGGCTTTGTTGTTGTTGTTGTTA 57.859 34.783 0.00 0.00 0.00 2.41
2302 2881 5.729510 AGGCTTTGTTGTTGTTGTTGTTAT 58.270 33.333 0.00 0.00 0.00 1.89
2303 2882 5.580297 AGGCTTTGTTGTTGTTGTTGTTATG 59.420 36.000 0.00 0.00 0.00 1.90
2304 2883 5.350091 GGCTTTGTTGTTGTTGTTGTTATGT 59.650 36.000 0.00 0.00 0.00 2.29
2305 2884 6.454981 GGCTTTGTTGTTGTTGTTGTTATGTC 60.455 38.462 0.00 0.00 0.00 3.06
2330 2909 5.584649 AGTTCACTCGTCAAAATTCAGTTGA 59.415 36.000 0.00 0.00 32.62 3.18
2331 2910 5.657470 TCACTCGTCAAAATTCAGTTGAG 57.343 39.130 0.00 0.00 35.71 3.02
2359 2938 7.122204 ACCTTTTAGTTTCACAGCAAAGTAGTT 59.878 33.333 0.00 0.00 0.00 2.24
2360 2939 7.644157 CCTTTTAGTTTCACAGCAAAGTAGTTC 59.356 37.037 0.00 0.00 0.00 3.01
2366 2945 7.335924 AGTTTCACAGCAAAGTAGTTCAGTTTA 59.664 33.333 0.00 0.00 0.00 2.01
2369 2948 8.220755 TCACAGCAAAGTAGTTCAGTTTATTT 57.779 30.769 0.00 0.00 0.00 1.40
2375 2954 8.915654 GCAAAGTAGTTCAGTTTATTTTCCATG 58.084 33.333 0.00 0.00 0.00 3.66
2381 2960 5.404466 TCAGTTTATTTTCCATGCAAGGG 57.596 39.130 8.36 4.65 40.85 3.95
2382 2961 3.934579 CAGTTTATTTTCCATGCAAGGGC 59.065 43.478 8.36 0.00 37.98 5.19
2384 2963 5.022787 AGTTTATTTTCCATGCAAGGGCTA 58.977 37.500 8.36 0.00 37.98 3.93
2399 2978 6.070767 TGCAAGGGCTATATTACAGTATCCTC 60.071 42.308 0.00 0.00 41.91 3.71
2415 2994 9.579932 ACAGTATCCTCTCAAAAGAAAAAGAAT 57.420 29.630 0.00 0.00 0.00 2.40
2483 3063 2.260869 TTGAGCAGCTCAAACCCGC 61.261 57.895 31.66 0.75 45.84 6.13
2487 3067 4.093952 CAGCTCAAACCCGCGCAG 62.094 66.667 8.75 0.00 0.00 5.18
2505 3085 2.395360 GCCCGAATGTAGCAACGCA 61.395 57.895 0.00 0.00 0.00 5.24
2538 3118 1.374190 CAGCCTCTGTGTTCCTGCT 59.626 57.895 0.00 0.00 0.00 4.24
2553 3133 2.069776 TGCTAGGCAGGCCATATCC 58.930 57.895 13.63 0.00 38.92 2.59
2555 3135 0.035630 GCTAGGCAGGCCATATCCAG 60.036 60.000 13.63 0.00 38.92 3.86
2573 3153 4.863548 TCCAGTATTTCCCTCTCGTTCTA 58.136 43.478 0.00 0.00 0.00 2.10
2576 3156 4.985409 CAGTATTTCCCTCTCGTTCTATGC 59.015 45.833 0.00 0.00 0.00 3.14
2639 3219 2.158943 GGGTATCACCACTGCTCCTTAC 60.159 54.545 0.00 0.00 41.02 2.34
2648 3228 4.893601 GCTCCTTACGGGCGAGCC 62.894 72.222 5.37 5.37 42.59 4.70
2665 3248 2.352805 CACCCTGGCTTCCTGGTC 59.647 66.667 7.80 0.00 40.44 4.02
2673 3256 1.492993 GGCTTCCTGGTCCTGAAGGT 61.493 60.000 17.94 0.00 38.69 3.50
2677 3260 1.814429 TCCTGGTCCTGAAGGTTCAA 58.186 50.000 0.00 0.00 36.64 2.69
2678 3261 2.348472 TCCTGGTCCTGAAGGTTCAAT 58.652 47.619 0.00 0.00 36.64 2.57
2683 3266 2.238521 GTCCTGAAGGTTCAATTGCCA 58.761 47.619 0.00 0.00 36.64 4.92
2688 3271 3.919435 TGAAGGTTCAATTGCCAGTGGC 61.919 50.000 28.01 28.01 41.00 5.01
2709 3292 0.380378 GCAGAGGTAGTGCTCTCTCG 59.620 60.000 0.00 0.00 38.19 4.04
2759 3342 0.250124 TAAGCACACCTCGTTGTGGG 60.250 55.000 13.74 9.89 46.00 4.61
2831 3421 8.323140 CAGCTATTACATGCTTTAAAAACATGC 58.677 33.333 21.97 9.30 43.96 4.06
2833 3423 6.983474 ATTACATGCTTTAAAAACATGCCC 57.017 33.333 21.97 0.00 43.96 5.36
2842 3432 3.883830 AAAAACATGCCCGCAATCATA 57.116 38.095 0.00 0.00 0.00 2.15
2843 3433 3.441496 AAAACATGCCCGCAATCATAG 57.559 42.857 0.00 0.00 0.00 2.23
2918 3508 2.485426 CGTGTCTGATGGCTGTGAAATT 59.515 45.455 0.00 0.00 0.00 1.82
2989 3579 0.984995 AGGTGGCCTGTTACTTCTCC 59.015 55.000 3.32 0.00 29.57 3.71
3005 3595 2.436646 CCGACATGCCACCAGTCC 60.437 66.667 0.00 0.00 0.00 3.85
3166 3787 0.895530 CTAGGGCAGACGTGAGGAAA 59.104 55.000 0.00 0.00 0.00 3.13
3275 3896 3.423539 TTGGCTATATCCATCCAGTGC 57.576 47.619 0.00 0.00 35.77 4.40
3294 3916 5.464722 CAGTGCCAGACTAGCAACAATATAG 59.535 44.000 0.00 0.00 43.02 1.31
3385 4014 1.577421 GCAGCCGGAAAAGCGTTAA 59.423 52.632 5.05 0.00 34.64 2.01
3386 4015 0.039888 GCAGCCGGAAAAGCGTTAAA 60.040 50.000 5.05 0.00 34.64 1.52
3418 4047 5.121221 CCAGTTGGTGAGTTGGAAAATAC 57.879 43.478 0.00 0.00 32.34 1.89
3419 4048 4.827284 CCAGTTGGTGAGTTGGAAAATACT 59.173 41.667 0.00 0.00 32.34 2.12
3420 4049 5.048713 CCAGTTGGTGAGTTGGAAAATACTC 60.049 44.000 0.00 0.00 40.89 2.59
3421 4050 5.048713 CAGTTGGTGAGTTGGAAAATACTCC 60.049 44.000 0.00 0.00 40.00 3.85
3422 4051 4.028993 TGGTGAGTTGGAAAATACTCCC 57.971 45.455 0.00 0.00 40.00 4.30
3423 4052 3.655777 TGGTGAGTTGGAAAATACTCCCT 59.344 43.478 0.00 0.00 40.00 4.20
3424 4053 4.262617 GGTGAGTTGGAAAATACTCCCTC 58.737 47.826 0.00 0.00 40.00 4.30
3425 4054 4.262617 GTGAGTTGGAAAATACTCCCTCC 58.737 47.826 0.00 0.00 40.00 4.30
3426 4055 3.055385 TGAGTTGGAAAATACTCCCTCCG 60.055 47.826 0.00 0.00 40.00 4.63
3427 4056 2.910977 AGTTGGAAAATACTCCCTCCGT 59.089 45.455 0.00 0.00 34.22 4.69
3428 4057 3.329814 AGTTGGAAAATACTCCCTCCGTT 59.670 43.478 0.00 0.00 34.22 4.44
3429 4058 3.622166 TGGAAAATACTCCCTCCGTTC 57.378 47.619 0.00 0.00 34.22 3.95
3430 4059 2.237893 TGGAAAATACTCCCTCCGTTCC 59.762 50.000 0.00 0.00 34.22 3.62
3431 4060 2.504585 GGAAAATACTCCCTCCGTTCCT 59.495 50.000 0.00 0.00 32.14 3.36
3432 4061 3.708121 GGAAAATACTCCCTCCGTTCCTA 59.292 47.826 0.00 0.00 32.14 2.94
3433 4062 4.162888 GGAAAATACTCCCTCCGTTCCTAA 59.837 45.833 0.00 0.00 32.14 2.69
3434 4063 5.338626 GGAAAATACTCCCTCCGTTCCTAAA 60.339 44.000 0.00 0.00 32.14 1.85
3435 4064 5.970501 AAATACTCCCTCCGTTCCTAAAT 57.029 39.130 0.00 0.00 0.00 1.40
3436 4065 7.419403 GGAAAATACTCCCTCCGTTCCTAAATA 60.419 40.741 0.00 0.00 32.14 1.40
3437 4066 7.628501 AAATACTCCCTCCGTTCCTAAATAT 57.371 36.000 0.00 0.00 0.00 1.28
3438 4067 7.628501 AATACTCCCTCCGTTCCTAAATATT 57.371 36.000 0.00 0.00 0.00 1.28
3439 4068 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3440 4069 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3441 4070 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3442 4071 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3443 4072 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3444 4073 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3445 4074 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3446 4075 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3447 4076 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3448 4077 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3449 4078 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3450 4079 8.827677 CCGTTCCTAAATATTTGTCTTTCTAGG 58.172 37.037 11.05 6.95 0.00 3.02
3451 4080 9.379791 CGTTCCTAAATATTTGTCTTTCTAGGT 57.620 33.333 11.05 0.00 0.00 3.08
3463 4092 8.974060 TTGTCTTTCTAGGTATTTCAACAAGT 57.026 30.769 0.00 0.00 0.00 3.16
3464 4093 8.378172 TGTCTTTCTAGGTATTTCAACAAGTG 57.622 34.615 0.00 0.00 0.00 3.16
3465 4094 8.208224 TGTCTTTCTAGGTATTTCAACAAGTGA 58.792 33.333 0.00 0.00 0.00 3.41
3466 4095 8.496751 GTCTTTCTAGGTATTTCAACAAGTGAC 58.503 37.037 0.00 0.00 35.39 3.67
3467 4096 8.429641 TCTTTCTAGGTATTTCAACAAGTGACT 58.570 33.333 0.00 0.00 35.39 3.41
3468 4097 9.706691 CTTTCTAGGTATTTCAACAAGTGACTA 57.293 33.333 0.00 0.00 35.39 2.59
3469 4098 9.485206 TTTCTAGGTATTTCAACAAGTGACTAC 57.515 33.333 0.00 0.00 35.39 2.73
3470 4099 8.185506 TCTAGGTATTTCAACAAGTGACTACA 57.814 34.615 0.00 0.00 35.39 2.74
3471 4100 8.812972 TCTAGGTATTTCAACAAGTGACTACAT 58.187 33.333 0.00 0.00 35.39 2.29
3473 4102 8.773404 AGGTATTTCAACAAGTGACTACATAC 57.227 34.615 0.00 0.00 35.39 2.39
3474 4103 7.544566 AGGTATTTCAACAAGTGACTACATACG 59.455 37.037 0.00 0.00 35.39 3.06
3475 4104 6.721571 ATTTCAACAAGTGACTACATACGG 57.278 37.500 0.00 0.00 35.39 4.02
3476 4105 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
3477 4106 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
3478 4107 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
3479 4108 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
3480 4109 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
3481 4110 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
3482 4111 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
3483 4112 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
3484 4113 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
3485 4114 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
3486 4115 5.350365 GTGACTACATACGGAGCAAAATGAA 59.650 40.000 0.00 0.00 0.00 2.57
3487 4116 6.037172 GTGACTACATACGGAGCAAAATGAAT 59.963 38.462 0.00 0.00 0.00 2.57
3488 4117 6.037062 TGACTACATACGGAGCAAAATGAATG 59.963 38.462 0.00 0.00 0.00 2.67
3489 4118 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
3490 4119 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
3491 4120 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
3492 4121 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
3493 4122 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
3494 4123 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
3495 4124 6.124088 ACGGAGCAAAATGAATGAATCTAC 57.876 37.500 0.00 0.00 0.00 2.59
3496 4125 5.647658 ACGGAGCAAAATGAATGAATCTACA 59.352 36.000 0.00 0.00 0.00 2.74
3497 4126 6.319658 ACGGAGCAAAATGAATGAATCTACAT 59.680 34.615 0.00 0.00 0.00 2.29
3498 4127 7.148018 ACGGAGCAAAATGAATGAATCTACATT 60.148 33.333 0.00 0.00 42.19 2.71
3533 4162 9.901172 TGTCTATATACATCCGTATGTGATAGT 57.099 33.333 17.08 3.55 45.99 2.12
3539 4168 8.763049 ATACATCCGTATGTGATAGTTCATTG 57.237 34.615 3.56 0.00 45.99 2.82
3540 4169 6.816136 ACATCCGTATGTGATAGTTCATTGA 58.184 36.000 0.00 0.00 44.79 2.57
3541 4170 7.272244 ACATCCGTATGTGATAGTTCATTGAA 58.728 34.615 0.00 0.00 44.79 2.69
3542 4171 7.768582 ACATCCGTATGTGATAGTTCATTGAAA 59.231 33.333 0.00 0.00 44.79 2.69
3543 4172 8.777413 CATCCGTATGTGATAGTTCATTGAAAT 58.223 33.333 4.61 4.61 33.56 2.17
3544 4173 9.996554 ATCCGTATGTGATAGTTCATTGAAATA 57.003 29.630 8.82 8.82 33.56 1.40
3545 4174 9.996554 TCCGTATGTGATAGTTCATTGAAATAT 57.003 29.630 16.81 16.81 35.88 1.28
3571 4200 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3572 4201 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3573 4202 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3574 4203 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3575 4204 6.555463 AGACAAATATTTAGGAACGGAGGA 57.445 37.500 0.00 0.00 0.00 3.71
3576 4205 6.954232 AGACAAATATTTAGGAACGGAGGAA 58.046 36.000 0.00 0.00 0.00 3.36
3577 4206 7.048512 AGACAAATATTTAGGAACGGAGGAAG 58.951 38.462 0.00 0.00 0.00 3.46
3607 4236 1.439365 GAGAAGCTGCAAACACGCG 60.439 57.895 3.53 3.53 33.35 6.01
3614 4243 2.058829 CTGCAAACACGCGGGAAGTT 62.059 55.000 19.19 9.19 34.46 2.66
3632 4261 1.133025 GTTCATGTTATGCCGCTGCTT 59.867 47.619 0.70 0.00 38.71 3.91
3636 4265 2.323968 TGTTATGCCGCTGCTTCATA 57.676 45.000 0.70 2.53 38.71 2.15
3648 4281 3.814283 GCTGCTTCATATTCTCCTTGGAG 59.186 47.826 10.28 10.28 0.00 3.86
3664 4297 3.315142 GAGGTGGATGGAGCGTGCA 62.315 63.158 0.00 0.00 0.00 4.57
3665 4298 2.821366 GGTGGATGGAGCGTGCAG 60.821 66.667 0.00 0.00 0.00 4.41
3714 4351 1.753649 CGATCACTCTCCACCATCTGT 59.246 52.381 0.00 0.00 0.00 3.41
3757 4394 1.829096 GACTAGTCCTCCCGGCTCC 60.829 68.421 12.13 0.00 0.00 4.70
3759 4396 3.028098 TAGTCCTCCCGGCTCCCT 61.028 66.667 0.00 0.00 0.00 4.20
3760 4397 2.591193 CTAGTCCTCCCGGCTCCCTT 62.591 65.000 0.00 0.00 0.00 3.95
3896 4538 2.804697 TATTTATGACGCAGGCGCTA 57.195 45.000 14.32 3.11 44.19 4.26
3921 4563 5.099575 CAGCCTTGTTTAAAAACGAACTGT 58.900 37.500 12.92 0.00 41.74 3.55
3975 4617 6.152661 TCCTGTAATTTTAAAGATGCTGGGTG 59.847 38.462 12.55 0.00 0.00 4.61
3978 4620 6.491745 TGTAATTTTAAAGATGCTGGGTGTGA 59.508 34.615 0.00 0.00 0.00 3.58
3983 4625 3.788227 AAGATGCTGGGTGTGAAAGTA 57.212 42.857 0.00 0.00 0.00 2.24
3993 4635 3.244596 GGGTGTGAAAGTAGAAGCTTCCT 60.245 47.826 22.81 10.98 0.00 3.36
4004 4646 4.899352 AGAAGCTTCCTTGTATGTCAGT 57.101 40.909 22.81 0.00 0.00 3.41
4046 4688 6.716628 TCTGTTCTTTAATCTGTGCCAGAATT 59.283 34.615 8.66 6.91 44.04 2.17
4057 4699 1.473677 TGCCAGAATTGCCATTCTTCG 59.526 47.619 10.22 5.38 46.07 3.79
4061 4703 3.278574 CAGAATTGCCATTCTTCGGGTA 58.721 45.455 10.22 0.00 46.07 3.69
4130 4776 4.158394 AGCGAGTGAAATGCATAAAACCAT 59.842 37.500 0.00 0.00 0.00 3.55
4158 4804 3.880490 TCGTGTCCTAACTTGCAAAACAT 59.120 39.130 0.00 0.00 0.00 2.71
4206 4853 2.222596 GCACTGAAAGCTATCGTTGACG 60.223 50.000 0.00 0.00 37.60 4.35
4216 4863 1.243902 ATCGTTGACGGTGGCAAAAT 58.756 45.000 3.48 0.00 40.29 1.82
4222 4869 2.577700 TGACGGTGGCAAAATACACTT 58.422 42.857 0.00 0.00 37.72 3.16
4226 4873 2.737783 CGGTGGCAAAATACACTTACGA 59.262 45.455 0.00 0.00 37.72 3.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.105392 TGGAGCACAAATGGAATTATGGAAC 60.105 40.000 0.00 0.00 33.67 3.62
12 13 3.960102 GGGATGGAGCACAAATGGAATTA 59.040 43.478 0.00 0.00 33.67 1.40
96 97 4.504858 AGAAGTATTAACCTGAAGGCACG 58.495 43.478 0.00 0.00 39.32 5.34
103 104 9.862149 AAAAGGAAAAGAGAAGTATTAACCTGA 57.138 29.630 0.00 0.00 0.00 3.86
110 111 8.306313 ACACCAAAAAGGAAAAGAGAAGTATT 57.694 30.769 0.00 0.00 41.22 1.89
121 122 5.639931 GCACTTTGTAACACCAAAAAGGAAA 59.360 36.000 0.00 0.00 41.22 3.13
122 123 5.172205 GCACTTTGTAACACCAAAAAGGAA 58.828 37.500 0.00 0.00 41.22 3.36
123 124 4.220821 TGCACTTTGTAACACCAAAAAGGA 59.779 37.500 0.00 0.00 41.22 3.36
133 134 4.980573 ACCCTAGAATGCACTTTGTAACA 58.019 39.130 0.00 0.00 0.00 2.41
138 139 4.074970 AGACAACCCTAGAATGCACTTTG 58.925 43.478 0.00 0.00 0.00 2.77
139 140 4.042187 AGAGACAACCCTAGAATGCACTTT 59.958 41.667 0.00 0.00 0.00 2.66
142 143 3.526534 GAGAGACAACCCTAGAATGCAC 58.473 50.000 0.00 0.00 0.00 4.57
144 145 2.482142 CCGAGAGACAACCCTAGAATGC 60.482 54.545 0.00 0.00 0.00 3.56
145 146 2.761208 ACCGAGAGACAACCCTAGAATG 59.239 50.000 0.00 0.00 0.00 2.67
146 147 3.025262 GACCGAGAGACAACCCTAGAAT 58.975 50.000 0.00 0.00 0.00 2.40
147 148 2.041350 AGACCGAGAGACAACCCTAGAA 59.959 50.000 0.00 0.00 0.00 2.10
148 149 1.634459 AGACCGAGAGACAACCCTAGA 59.366 52.381 0.00 0.00 0.00 2.43
149 150 2.018515 GAGACCGAGAGACAACCCTAG 58.981 57.143 0.00 0.00 0.00 3.02
150 151 1.634459 AGAGACCGAGAGACAACCCTA 59.366 52.381 0.00 0.00 0.00 3.53
151 152 0.406361 AGAGACCGAGAGACAACCCT 59.594 55.000 0.00 0.00 0.00 4.34
152 153 0.812549 GAGAGACCGAGAGACAACCC 59.187 60.000 0.00 0.00 0.00 4.11
153 154 1.470890 CAGAGAGACCGAGAGACAACC 59.529 57.143 0.00 0.00 0.00 3.77
154 155 1.470890 CCAGAGAGACCGAGAGACAAC 59.529 57.143 0.00 0.00 0.00 3.32
155 156 1.074084 ACCAGAGAGACCGAGAGACAA 59.926 52.381 0.00 0.00 0.00 3.18
156 157 0.693622 ACCAGAGAGACCGAGAGACA 59.306 55.000 0.00 0.00 0.00 3.41
157 158 1.828979 AACCAGAGAGACCGAGAGAC 58.171 55.000 0.00 0.00 0.00 3.36
158 159 2.588464 AAACCAGAGAGACCGAGAGA 57.412 50.000 0.00 0.00 0.00 3.10
159 160 2.414824 CGAAAACCAGAGAGACCGAGAG 60.415 54.545 0.00 0.00 0.00 3.20
160 161 1.540267 CGAAAACCAGAGAGACCGAGA 59.460 52.381 0.00 0.00 0.00 4.04
161 162 1.402984 CCGAAAACCAGAGAGACCGAG 60.403 57.143 0.00 0.00 0.00 4.63
162 163 0.601558 CCGAAAACCAGAGAGACCGA 59.398 55.000 0.00 0.00 0.00 4.69
163 164 0.601558 TCCGAAAACCAGAGAGACCG 59.398 55.000 0.00 0.00 0.00 4.79
164 165 1.673329 GCTCCGAAAACCAGAGAGACC 60.673 57.143 0.00 0.00 0.00 3.85
165 166 1.715993 GCTCCGAAAACCAGAGAGAC 58.284 55.000 0.00 0.00 0.00 3.36
166 167 0.243907 CGCTCCGAAAACCAGAGAGA 59.756 55.000 0.00 0.00 29.96 3.10
167 168 0.243907 TCGCTCCGAAAACCAGAGAG 59.756 55.000 0.00 0.00 31.06 3.20
185 186 5.297547 TGGAGTCAACACTGAACTACATTC 58.702 41.667 0.00 0.00 37.88 2.67
227 229 9.009327 CCGTAAAGCATACAAAGAAACAATATG 57.991 33.333 0.00 0.00 0.00 1.78
228 230 8.952278 TCCGTAAAGCATACAAAGAAACAATAT 58.048 29.630 0.00 0.00 0.00 1.28
235 239 8.958119 ATATTCTCCGTAAAGCATACAAAGAA 57.042 30.769 12.21 12.21 0.00 2.52
240 244 8.857098 AGAAGTATATTCTCCGTAAAGCATACA 58.143 33.333 0.00 0.00 0.00 2.29
241 245 9.344309 GAGAAGTATATTCTCCGTAAAGCATAC 57.656 37.037 6.38 0.00 39.11 2.39
264 268 8.643324 GCTCTTATATTTCTTTACAGAGGGAGA 58.357 37.037 0.00 0.00 0.00 3.71
265 269 7.596995 CGCTCTTATATTTCTTTACAGAGGGAG 59.403 40.741 4.76 0.00 40.49 4.30
266 270 7.069578 ACGCTCTTATATTTCTTTACAGAGGGA 59.930 37.037 14.96 0.00 40.49 4.20
267 271 7.169982 CACGCTCTTATATTTCTTTACAGAGGG 59.830 40.741 8.36 8.36 42.53 4.30
268 272 7.921214 TCACGCTCTTATATTTCTTTACAGAGG 59.079 37.037 0.00 0.00 0.00 3.69
269 273 8.858003 TCACGCTCTTATATTTCTTTACAGAG 57.142 34.615 0.00 0.00 0.00 3.35
270 274 9.249457 CATCACGCTCTTATATTTCTTTACAGA 57.751 33.333 0.00 0.00 0.00 3.41
271 275 8.006590 GCATCACGCTCTTATATTTCTTTACAG 58.993 37.037 0.00 0.00 37.77 2.74
272 276 7.851508 GCATCACGCTCTTATATTTCTTTACA 58.148 34.615 0.00 0.00 37.77 2.41
289 293 7.004225 CGTAAAGAAATATAAGAGCATCACGC 58.996 38.462 0.00 0.00 37.82 5.34
290 294 7.381408 TCCGTAAAGAAATATAAGAGCATCACG 59.619 37.037 0.00 0.00 37.82 4.35
291 295 8.589335 TCCGTAAAGAAATATAAGAGCATCAC 57.411 34.615 0.00 0.00 37.82 3.06
292 296 7.872993 CCTCCGTAAAGAAATATAAGAGCATCA 59.127 37.037 0.00 0.00 37.82 3.07
293 297 7.332182 CCCTCCGTAAAGAAATATAAGAGCATC 59.668 40.741 0.00 0.00 0.00 3.91
294 298 7.016268 TCCCTCCGTAAAGAAATATAAGAGCAT 59.984 37.037 0.00 0.00 0.00 3.79
295 299 6.325545 TCCCTCCGTAAAGAAATATAAGAGCA 59.674 38.462 0.00 0.00 0.00 4.26
296 300 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
297 301 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
298 302 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
299 303 8.858094 ACTACTCCCTCCGTAAAGAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
300 304 8.773033 ACTACTCCCTCCGTAAAGAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
301 305 9.512588 CTACTACTCCCTCCGTAAAGAAATATA 57.487 37.037 0.00 0.00 0.00 0.86
302 306 8.223330 TCTACTACTCCCTCCGTAAAGAAATAT 58.777 37.037 0.00 0.00 0.00 1.28
303 307 7.577303 TCTACTACTCCCTCCGTAAAGAAATA 58.423 38.462 0.00 0.00 0.00 1.40
304 308 6.430007 TCTACTACTCCCTCCGTAAAGAAAT 58.570 40.000 0.00 0.00 0.00 2.17
305 309 5.819991 TCTACTACTCCCTCCGTAAAGAAA 58.180 41.667 0.00 0.00 0.00 2.52
306 310 5.441718 TCTACTACTCCCTCCGTAAAGAA 57.558 43.478 0.00 0.00 0.00 2.52
307 311 5.643421 ATCTACTACTCCCTCCGTAAAGA 57.357 43.478 0.00 0.00 0.00 2.52
308 312 7.166851 TCATATCTACTACTCCCTCCGTAAAG 58.833 42.308 0.00 0.00 0.00 1.85
309 313 7.083062 TCATATCTACTACTCCCTCCGTAAA 57.917 40.000 0.00 0.00 0.00 2.01
310 314 6.692849 TCATATCTACTACTCCCTCCGTAA 57.307 41.667 0.00 0.00 0.00 3.18
311 315 6.887886 ATCATATCTACTACTCCCTCCGTA 57.112 41.667 0.00 0.00 0.00 4.02
312 316 5.782677 ATCATATCTACTACTCCCTCCGT 57.217 43.478 0.00 0.00 0.00 4.69
460 464 6.978674 AGACATAAAGAATCCGAGGTGATA 57.021 37.500 0.00 0.00 0.00 2.15
461 465 5.878406 AGACATAAAGAATCCGAGGTGAT 57.122 39.130 0.00 0.00 0.00 3.06
462 466 5.419542 CAAGACATAAAGAATCCGAGGTGA 58.580 41.667 0.00 0.00 0.00 4.02
463 467 4.572389 CCAAGACATAAAGAATCCGAGGTG 59.428 45.833 0.00 0.00 0.00 4.00
470 474 2.033424 GCCGGCCAAGACATAAAGAATC 59.967 50.000 18.11 0.00 0.00 2.52
483 487 2.679642 CCTGGAATTGCCGGCCAA 60.680 61.111 26.77 18.57 42.12 4.52
527 531 9.626045 GGTAACAGAACATTTCCATTTAAAGAG 57.374 33.333 0.00 0.00 0.00 2.85
548 552 3.721035 ACCGCGTCCATATTTAGGTAAC 58.279 45.455 4.92 0.00 0.00 2.50
552 556 5.738118 TTTTAACCGCGTCCATATTTAGG 57.262 39.130 4.92 0.00 0.00 2.69
893 898 5.105797 GGTCCTACATGACATTGAAATGCAA 60.106 40.000 0.00 0.00 40.04 4.08
900 905 3.843619 TGAAGGGTCCTACATGACATTGA 59.156 43.478 0.00 0.00 36.97 2.57
1029 1085 2.203625 GTTGGCCTTTGCTCCCCA 60.204 61.111 3.32 0.00 37.74 4.96
1290 1346 1.775459 AGCTCTTCTGATGATGGGCAT 59.225 47.619 6.57 0.00 43.74 4.40
1368 1424 4.635223 TCATCATGCTTATTCCTTCCTCG 58.365 43.478 0.00 0.00 0.00 4.63
1416 1472 1.236616 CCTGTTGAGCGCCACAATGA 61.237 55.000 17.92 9.19 0.00 2.57
1427 1483 1.669779 GCAAGCTGCTATCCTGTTGAG 59.330 52.381 0.90 0.00 40.96 3.02
1455 1511 3.866651 ACTGATGAGTGATGTGTTAGCC 58.133 45.455 0.00 0.00 0.00 3.93
1482 1538 1.961793 TAAGCTTTTCGCCAGTGTGT 58.038 45.000 3.20 0.00 40.39 3.72
1484 1540 3.439129 GGTATTAAGCTTTTCGCCAGTGT 59.561 43.478 3.20 0.00 40.39 3.55
1503 1559 4.679662 GAAGATTCATTTCGTCTCCGGTA 58.320 43.478 0.00 0.00 33.95 4.02
1504 1560 3.522553 GAAGATTCATTTCGTCTCCGGT 58.477 45.455 0.00 0.00 33.95 5.28
1508 1564 2.285488 GGCCGAAGATTCATTTCGTCTC 59.715 50.000 6.63 0.00 44.30 3.36
1539 1595 1.281287 ACTGATTGAGCTGGCTGATGT 59.719 47.619 0.00 0.00 0.00 3.06
1548 1604 2.012673 GCCATCGAAACTGATTGAGCT 58.987 47.619 0.00 0.00 0.00 4.09
1563 1619 5.003804 CCATATTGTACCTTAGGTGCCATC 58.996 45.833 15.13 0.35 37.51 3.51
1627 1684 5.165961 TGCAGAAACCTAGCAGAATAGTT 57.834 39.130 0.00 0.00 33.75 2.24
1640 1697 3.881688 AGCTGATGACATATGCAGAAACC 59.118 43.478 11.04 0.00 0.00 3.27
1696 1753 7.607607 AGCATGACTAATGTTTGACTACATTCA 59.392 33.333 0.00 0.00 43.39 2.57
1705 1762 6.701340 AGTCTACAGCATGACTAATGTTTGA 58.299 36.000 0.00 0.00 41.19 2.69
1748 1809 3.334583 AGGTATGCGCCTATATTGGTG 57.665 47.619 11.85 11.85 37.04 4.17
1755 1816 2.222027 GCAGAAAAGGTATGCGCCTAT 58.778 47.619 4.18 0.00 38.03 2.57
1756 1817 1.065782 TGCAGAAAAGGTATGCGCCTA 60.066 47.619 4.18 0.00 42.92 3.93
1757 1818 0.322456 TGCAGAAAAGGTATGCGCCT 60.322 50.000 4.18 0.00 42.92 5.52
1758 1819 0.099436 CTGCAGAAAAGGTATGCGCC 59.901 55.000 8.42 0.00 42.92 6.53
1759 1820 0.099436 CCTGCAGAAAAGGTATGCGC 59.901 55.000 17.39 0.00 42.92 6.09
1760 1821 0.099436 GCCTGCAGAAAAGGTATGCG 59.901 55.000 17.39 0.00 42.92 4.73
1767 1828 4.996788 AGATAATTGGCCTGCAGAAAAG 57.003 40.909 17.39 0.00 0.00 2.27
1769 1830 5.481473 AGAAAAGATAATTGGCCTGCAGAAA 59.519 36.000 17.39 7.11 0.00 2.52
1780 1841 8.081633 TGCCAACAGTACAAGAAAAGATAATTG 58.918 33.333 0.00 0.00 0.00 2.32
1784 1845 7.575414 TTTGCCAACAGTACAAGAAAAGATA 57.425 32.000 0.00 0.00 0.00 1.98
1788 1849 6.402222 ACATTTTGCCAACAGTACAAGAAAA 58.598 32.000 0.00 0.00 0.00 2.29
1790 1851 5.590530 ACATTTTGCCAACAGTACAAGAA 57.409 34.783 0.00 0.00 0.00 2.52
1815 2319 9.607988 TGACCGCTCAGATTAAGAATATTTTTA 57.392 29.630 0.00 0.00 0.00 1.52
1821 2325 6.403049 TGTTTGACCGCTCAGATTAAGAATA 58.597 36.000 0.00 0.00 0.00 1.75
1823 2327 4.637276 TGTTTGACCGCTCAGATTAAGAA 58.363 39.130 0.00 0.00 0.00 2.52
1835 2339 5.529014 AAATATTGCAATTGTTTGACCGC 57.471 34.783 18.75 0.00 34.60 5.68
1837 2341 7.432350 TCCAAAATATTGCAATTGTTTGACC 57.568 32.000 30.26 0.00 35.10 4.02
1863 2367 4.473444 ACCATGCATAAAAAGATCCCGAT 58.527 39.130 0.00 0.00 0.00 4.18
1895 2399 4.000988 GGACGGAGAAAGCTGTTTTATGA 58.999 43.478 0.00 0.00 0.00 2.15
1897 2401 3.009143 AGGGACGGAGAAAGCTGTTTTAT 59.991 43.478 0.00 0.00 0.00 1.40
1903 2407 0.737715 CGAAGGGACGGAGAAAGCTG 60.738 60.000 0.00 0.00 0.00 4.24
1904 2408 1.186267 ACGAAGGGACGGAGAAAGCT 61.186 55.000 0.00 0.00 37.61 3.74
1907 2411 2.449464 TGATACGAAGGGACGGAGAAA 58.551 47.619 0.00 0.00 37.61 2.52
1909 2413 2.359981 ATGATACGAAGGGACGGAGA 57.640 50.000 0.00 0.00 37.61 3.71
1917 2421 7.889589 TCATAAGCATACAATGATACGAAGG 57.110 36.000 0.00 0.00 0.00 3.46
1921 2425 9.882996 AACATTTCATAAGCATACAATGATACG 57.117 29.630 0.00 0.00 30.17 3.06
1924 2428 8.698210 ACCAACATTTCATAAGCATACAATGAT 58.302 29.630 0.00 0.00 30.17 2.45
1969 2473 6.626302 TGAACATATCGTCATCTGTTACACA 58.374 36.000 0.00 0.00 31.26 3.72
2004 2508 9.112725 TCATCCACACAGAAGTTTTCATATATG 57.887 33.333 6.36 6.36 0.00 1.78
2032 2536 1.538047 TTCTCAAATGTCAGGCCAGC 58.462 50.000 5.01 0.00 0.00 4.85
2033 2537 5.591472 TCATAATTCTCAAATGTCAGGCCAG 59.409 40.000 5.01 0.00 0.00 4.85
2036 2540 7.325660 TCTTCATAATTCTCAAATGTCAGGC 57.674 36.000 0.00 0.00 0.00 4.85
2061 2565 2.543777 TGTGAGGAGTACCAAACAGC 57.456 50.000 0.00 0.00 38.94 4.40
2076 2580 3.758755 AGTTGCTCTGTCTGAATGTGA 57.241 42.857 0.00 0.00 0.00 3.58
2080 2584 7.108194 TCATCAAATAGTTGCTCTGTCTGAAT 58.892 34.615 0.00 0.00 34.50 2.57
2123 2627 3.903090 TGGCATTTCCTTCATTCCAAAGT 59.097 39.130 0.00 0.00 35.26 2.66
2129 2633 2.737679 GCAGCTGGCATTTCCTTCATTC 60.738 50.000 17.12 0.00 43.97 2.67
2158 2662 3.537580 TGCAGAAAGTACAAACCTCGTT 58.462 40.909 0.00 0.00 0.00 3.85
2161 2665 5.689383 TTCATGCAGAAAGTACAAACCTC 57.311 39.130 0.00 0.00 32.05 3.85
2181 2686 8.103935 CCAGGGGAGGTAAATAGAGAATATTTC 58.896 40.741 0.00 0.00 0.00 2.17
2185 2690 5.844516 CACCAGGGGAGGTAAATAGAGAATA 59.155 44.000 0.00 0.00 40.77 1.75
2186 2691 4.660771 CACCAGGGGAGGTAAATAGAGAAT 59.339 45.833 0.00 0.00 40.77 2.40
2188 2693 3.654273 CACCAGGGGAGGTAAATAGAGA 58.346 50.000 0.00 0.00 40.77 3.10
2195 2700 2.206322 ATATGCACCAGGGGAGGTAA 57.794 50.000 0.00 0.00 40.77 2.85
2196 2701 2.206322 AATATGCACCAGGGGAGGTA 57.794 50.000 0.00 0.00 40.77 3.08
2198 2703 2.034124 CAAAATATGCACCAGGGGAGG 58.966 52.381 0.00 0.00 0.00 4.30
2199 2704 2.034124 CCAAAATATGCACCAGGGGAG 58.966 52.381 0.00 0.00 0.00 4.30
2200 2705 1.643286 TCCAAAATATGCACCAGGGGA 59.357 47.619 0.00 0.00 0.00 4.81
2201 2706 2.157640 TCCAAAATATGCACCAGGGG 57.842 50.000 0.00 0.00 0.00 4.79
2203 2708 4.021192 ACAACTTCCAAAATATGCACCAGG 60.021 41.667 0.00 0.00 0.00 4.45
2204 2709 5.138125 ACAACTTCCAAAATATGCACCAG 57.862 39.130 0.00 0.00 0.00 4.00
2206 2711 7.096551 ACATAACAACTTCCAAAATATGCACC 58.903 34.615 0.00 0.00 0.00 5.01
2207 2712 7.812191 TGACATAACAACTTCCAAAATATGCAC 59.188 33.333 0.00 0.00 0.00 4.57
2208 2713 7.890515 TGACATAACAACTTCCAAAATATGCA 58.109 30.769 0.00 0.00 0.00 3.96
2209 2714 8.028938 ACTGACATAACAACTTCCAAAATATGC 58.971 33.333 0.00 0.00 0.00 3.14
2210 2715 9.912634 AACTGACATAACAACTTCCAAAATATG 57.087 29.630 0.00 0.00 0.00 1.78
2212 2717 9.126151 TGAACTGACATAACAACTTCCAAAATA 57.874 29.630 0.00 0.00 0.00 1.40
2213 2718 8.006298 TGAACTGACATAACAACTTCCAAAAT 57.994 30.769 0.00 0.00 0.00 1.82
2214 2719 7.397892 TGAACTGACATAACAACTTCCAAAA 57.602 32.000 0.00 0.00 0.00 2.44
2215 2720 6.039270 CCTGAACTGACATAACAACTTCCAAA 59.961 38.462 0.00 0.00 0.00 3.28
2218 2797 4.455877 CCCTGAACTGACATAACAACTTCC 59.544 45.833 0.00 0.00 0.00 3.46
2234 2813 3.198853 AGGCTAGAGATGAAACCCTGAAC 59.801 47.826 0.00 0.00 0.00 3.18
2235 2814 3.454858 AGGCTAGAGATGAAACCCTGAA 58.545 45.455 0.00 0.00 0.00 3.02
2236 2815 3.121929 AGGCTAGAGATGAAACCCTGA 57.878 47.619 0.00 0.00 0.00 3.86
2237 2816 3.070302 GGTAGGCTAGAGATGAAACCCTG 59.930 52.174 0.00 0.00 0.00 4.45
2238 2817 3.310193 GGTAGGCTAGAGATGAAACCCT 58.690 50.000 0.00 0.00 0.00 4.34
2239 2818 2.369203 GGGTAGGCTAGAGATGAAACCC 59.631 54.545 0.00 0.00 38.66 4.11
2240 2819 2.369203 GGGGTAGGCTAGAGATGAAACC 59.631 54.545 0.00 0.00 0.00 3.27
2241 2820 3.039011 TGGGGTAGGCTAGAGATGAAAC 58.961 50.000 0.00 0.00 0.00 2.78
2242 2821 3.414759 TGGGGTAGGCTAGAGATGAAA 57.585 47.619 0.00 0.00 0.00 2.69
2243 2822 3.039011 GTTGGGGTAGGCTAGAGATGAA 58.961 50.000 0.00 0.00 0.00 2.57
2244 2823 2.247635 AGTTGGGGTAGGCTAGAGATGA 59.752 50.000 0.00 0.00 0.00 2.92
2245 2824 2.683768 AGTTGGGGTAGGCTAGAGATG 58.316 52.381 0.00 0.00 0.00 2.90
2246 2825 3.041946 CAAGTTGGGGTAGGCTAGAGAT 58.958 50.000 0.00 0.00 0.00 2.75
2247 2826 2.225547 ACAAGTTGGGGTAGGCTAGAGA 60.226 50.000 7.96 0.00 0.00 3.10
2248 2827 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
2249 2828 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2250 2829 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
2251 2830 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
2252 2831 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
2261 2840 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
2262 2841 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
2263 2842 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
2264 2843 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
2265 2844 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
2266 2845 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
2267 2846 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
2268 2847 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
2269 2848 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
2270 2849 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
2271 2850 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
2272 2851 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
2273 2852 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
2274 2853 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
2275 2854 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
2276 2855 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
2277 2856 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
2278 2857 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
2279 2858 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
2280 2859 5.350091 ACATAACAACAACAACAACAAAGCC 59.650 36.000 0.00 0.00 0.00 4.35
2281 2860 6.090088 TGACATAACAACAACAACAACAAAGC 59.910 34.615 0.00 0.00 0.00 3.51
2282 2861 7.328249 ACTGACATAACAACAACAACAACAAAG 59.672 33.333 0.00 0.00 0.00 2.77
2283 2862 7.148641 ACTGACATAACAACAACAACAACAAA 58.851 30.769 0.00 0.00 0.00 2.83
2284 2863 6.682746 ACTGACATAACAACAACAACAACAA 58.317 32.000 0.00 0.00 0.00 2.83
2285 2864 6.260870 ACTGACATAACAACAACAACAACA 57.739 33.333 0.00 0.00 0.00 3.33
2286 2865 6.804295 TGAACTGACATAACAACAACAACAAC 59.196 34.615 0.00 0.00 0.00 3.32
2287 2866 6.804295 GTGAACTGACATAACAACAACAACAA 59.196 34.615 0.00 0.00 0.00 2.83
2288 2867 6.150307 AGTGAACTGACATAACAACAACAACA 59.850 34.615 0.00 0.00 0.00 3.33
2289 2868 6.551736 AGTGAACTGACATAACAACAACAAC 58.448 36.000 0.00 0.00 0.00 3.32
2290 2869 6.456315 CGAGTGAACTGACATAACAACAACAA 60.456 38.462 0.00 0.00 0.00 2.83
2291 2870 5.006261 CGAGTGAACTGACATAACAACAACA 59.994 40.000 0.00 0.00 0.00 3.33
2292 2871 5.006358 ACGAGTGAACTGACATAACAACAAC 59.994 40.000 0.00 0.00 0.00 3.32
2293 2872 5.113383 ACGAGTGAACTGACATAACAACAA 58.887 37.500 0.00 0.00 0.00 2.83
2294 2873 4.689071 ACGAGTGAACTGACATAACAACA 58.311 39.130 0.00 0.00 0.00 3.33
2295 2874 4.743151 TGACGAGTGAACTGACATAACAAC 59.257 41.667 0.00 0.00 0.00 3.32
2296 2875 4.939271 TGACGAGTGAACTGACATAACAA 58.061 39.130 0.00 0.00 0.00 2.83
2297 2876 4.577834 TGACGAGTGAACTGACATAACA 57.422 40.909 0.00 0.00 0.00 2.41
2298 2877 5.900339 TTTGACGAGTGAACTGACATAAC 57.100 39.130 0.00 0.00 0.00 1.89
2299 2878 7.225734 TGAATTTTGACGAGTGAACTGACATAA 59.774 33.333 0.00 0.00 0.00 1.90
2300 2879 6.704050 TGAATTTTGACGAGTGAACTGACATA 59.296 34.615 0.00 0.00 0.00 2.29
2301 2880 5.527214 TGAATTTTGACGAGTGAACTGACAT 59.473 36.000 0.00 0.00 0.00 3.06
2302 2881 4.873259 TGAATTTTGACGAGTGAACTGACA 59.127 37.500 0.00 0.00 0.00 3.58
2303 2882 5.006746 ACTGAATTTTGACGAGTGAACTGAC 59.993 40.000 0.00 0.00 0.00 3.51
2304 2883 5.116180 ACTGAATTTTGACGAGTGAACTGA 58.884 37.500 0.00 0.00 0.00 3.41
2305 2884 5.409643 ACTGAATTTTGACGAGTGAACTG 57.590 39.130 0.00 0.00 0.00 3.16
2330 2909 4.164843 TGCTGTGAAACTAAAAGGTCCT 57.835 40.909 0.00 0.00 38.04 3.85
2331 2910 4.911514 TTGCTGTGAAACTAAAAGGTCC 57.088 40.909 0.00 0.00 38.04 4.46
2359 2938 4.322650 GCCCTTGCATGGAAAATAAACTGA 60.323 41.667 19.85 0.00 37.47 3.41
2360 2939 3.934579 GCCCTTGCATGGAAAATAAACTG 59.065 43.478 19.85 0.49 37.47 3.16
2366 2945 6.782000 TGTAATATAGCCCTTGCATGGAAAAT 59.218 34.615 19.85 11.32 41.13 1.82
2369 2948 5.163099 ACTGTAATATAGCCCTTGCATGGAA 60.163 40.000 19.85 0.00 41.13 3.53
2408 2987 9.965902 AACCATCAGATAGACTACAATTCTTTT 57.034 29.630 0.00 0.00 0.00 2.27
2415 2994 9.817809 GTGAATTAACCATCAGATAGACTACAA 57.182 33.333 0.00 0.00 0.00 2.41
2467 3047 3.793144 CGCGGGTTTGAGCTGCTC 61.793 66.667 22.38 22.38 45.22 4.26
2483 3063 2.106074 TTGCTACATTCGGGCTGCG 61.106 57.895 0.00 0.00 0.00 5.18
2487 3067 2.309764 CTGCGTTGCTACATTCGGGC 62.310 60.000 0.00 0.00 0.00 6.13
2517 3097 0.036577 CAGGAACACAGAGGCTGGAG 60.037 60.000 0.00 0.00 35.51 3.86
2523 3103 0.107945 GCCTAGCAGGAACACAGAGG 60.108 60.000 6.40 0.00 37.67 3.69
2538 3118 2.713828 TACTGGATATGGCCTGCCTA 57.286 50.000 9.97 0.08 36.94 3.93
2553 3133 4.985409 GCATAGAACGAGAGGGAAATACTG 59.015 45.833 0.00 0.00 0.00 2.74
2555 3135 5.203060 AGCATAGAACGAGAGGGAAATAC 57.797 43.478 0.00 0.00 0.00 1.89
2573 3153 1.072806 TGCTCTCACCAGTCAAAGCAT 59.927 47.619 0.00 0.00 35.02 3.79
2576 3156 2.095364 GCATTGCTCTCACCAGTCAAAG 60.095 50.000 0.16 0.00 0.00 2.77
2648 3228 2.352805 GACCAGGAAGCCAGGGTG 59.647 66.667 0.00 0.00 34.22 4.61
2665 3248 2.029649 CACTGGCAATTGAACCTTCAGG 60.030 50.000 10.34 0.00 38.61 3.86
2683 3266 1.978473 CACTACCTCTGCTGCCACT 59.022 57.895 0.00 0.00 0.00 4.00
2688 3271 1.405105 GAGAGAGCACTACCTCTGCTG 59.595 57.143 0.00 0.00 45.23 4.41
2709 3292 2.961526 TCTTCTTCTCCATGTACCGC 57.038 50.000 0.00 0.00 0.00 5.68
2809 3392 6.754209 CGGGCATGTTTTTAAAGCATGTAATA 59.246 34.615 26.64 3.07 41.27 0.98
2824 3413 2.378038 ACTATGATTGCGGGCATGTTT 58.622 42.857 0.00 0.00 0.00 2.83
2831 3421 2.643551 ACAGGAAACTATGATTGCGGG 58.356 47.619 0.00 0.00 40.21 6.13
2833 3423 4.631377 TCTGAACAGGAAACTATGATTGCG 59.369 41.667 1.93 0.00 40.21 4.85
2842 3432 7.503902 AGCTTTTAGAATTCTGAACAGGAAACT 59.496 33.333 18.47 0.00 46.44 2.66
2843 3433 7.652727 AGCTTTTAGAATTCTGAACAGGAAAC 58.347 34.615 18.47 0.00 0.00 2.78
2889 3479 0.943835 CCATCAGACACGTGTGCGAA 60.944 55.000 28.82 9.04 42.00 4.70
2938 3528 7.546778 ACAGCTATAAAGAAAAGCTTAGCTC 57.453 36.000 7.36 4.44 43.97 4.09
2989 3579 2.815211 CGGACTGGTGGCATGTCG 60.815 66.667 0.00 0.00 0.00 4.35
3005 3595 0.521735 GAAGCTAAGGTGGCCAAACG 59.478 55.000 7.24 0.00 0.00 3.60
3061 3651 9.143631 CAAAGGATGCTTAGTAAATTTTGGAAG 57.856 33.333 0.00 0.00 0.00 3.46
3063 3653 7.234577 ACCAAAGGATGCTTAGTAAATTTTGGA 59.765 33.333 20.23 0.00 42.73 3.53
3104 3725 6.223120 TGATCTTCTTGTCGAATCTGTCAAA 58.777 36.000 0.00 0.00 0.00 2.69
3105 3726 5.783111 TGATCTTCTTGTCGAATCTGTCAA 58.217 37.500 0.00 0.00 0.00 3.18
3166 3787 2.774633 AAACCGGCCCTTGACCCTT 61.775 57.895 0.00 0.00 0.00 3.95
3275 3896 5.220710 AGGCTATATTGTTGCTAGTCTGG 57.779 43.478 0.00 0.00 0.00 3.86
3294 3916 1.654954 CCACATGAGCTGCTGAAGGC 61.655 60.000 7.01 0.00 42.22 4.35
3400 4029 4.105697 AGGGAGTATTTTCCAACTCACCAA 59.894 41.667 1.26 0.00 45.49 3.67
3416 4045 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
3417 4046 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
3418 4047 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3419 4048 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3420 4049 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3421 4050 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3422 4051 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3423 4052 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3424 4053 8.827677 CCTAGAAAGACAAATATTTAGGAACGG 58.172 37.037 0.00 0.00 0.00 4.44
3425 4054 9.379791 ACCTAGAAAGACAAATATTTAGGAACG 57.620 33.333 13.75 0.00 0.00 3.95
3437 4066 9.403583 ACTTGTTGAAATACCTAGAAAGACAAA 57.596 29.630 0.00 0.00 0.00 2.83
3438 4067 8.836413 CACTTGTTGAAATACCTAGAAAGACAA 58.164 33.333 0.00 0.00 0.00 3.18
3439 4068 8.208224 TCACTTGTTGAAATACCTAGAAAGACA 58.792 33.333 0.00 0.00 0.00 3.41
3440 4069 8.496751 GTCACTTGTTGAAATACCTAGAAAGAC 58.503 37.037 0.00 0.00 35.39 3.01
3441 4070 8.429641 AGTCACTTGTTGAAATACCTAGAAAGA 58.570 33.333 0.00 0.00 35.39 2.52
3442 4071 8.608844 AGTCACTTGTTGAAATACCTAGAAAG 57.391 34.615 0.00 0.00 35.39 2.62
3443 4072 9.485206 GTAGTCACTTGTTGAAATACCTAGAAA 57.515 33.333 0.00 0.00 35.39 2.52
3444 4073 8.644216 TGTAGTCACTTGTTGAAATACCTAGAA 58.356 33.333 0.00 0.00 35.39 2.10
3445 4074 8.185506 TGTAGTCACTTGTTGAAATACCTAGA 57.814 34.615 0.00 0.00 35.39 2.43
3447 4076 9.865321 GTATGTAGTCACTTGTTGAAATACCTA 57.135 33.333 0.00 0.00 35.39 3.08
3448 4077 7.544566 CGTATGTAGTCACTTGTTGAAATACCT 59.455 37.037 0.00 0.00 35.39 3.08
3449 4078 7.201496 CCGTATGTAGTCACTTGTTGAAATACC 60.201 40.741 0.00 0.00 35.39 2.73
3450 4079 7.543172 TCCGTATGTAGTCACTTGTTGAAATAC 59.457 37.037 0.00 0.00 35.39 1.89
3451 4080 7.604549 TCCGTATGTAGTCACTTGTTGAAATA 58.395 34.615 0.00 0.00 35.39 1.40
3452 4081 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
3453 4082 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
3454 4083 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
3455 4084 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
3456 4085 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
3457 4086 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
3458 4087 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
3459 4088 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
3460 4089 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
3461 4090 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
3462 4091 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
3463 4092 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
3464 4093 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
3465 4094 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
3466 4095 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
3467 4096 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
3468 4097 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
3469 4098 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
3470 4099 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
3471 4100 6.821160 TGTAGATTCATTCATTTTGCTCCGTA 59.179 34.615 0.00 0.00 0.00 4.02
3472 4101 5.647658 TGTAGATTCATTCATTTTGCTCCGT 59.352 36.000 0.00 0.00 0.00 4.69
3473 4102 6.122850 TGTAGATTCATTCATTTTGCTCCG 57.877 37.500 0.00 0.00 0.00 4.63
3507 4136 9.901172 ACTATCACATACGGATGTATATAGACA 57.099 33.333 30.73 11.02 44.82 3.41
3513 4142 9.855021 CAATGAACTATCACATACGGATGTATA 57.145 33.333 14.23 10.59 44.82 1.47
3514 4143 8.585018 TCAATGAACTATCACATACGGATGTAT 58.415 33.333 14.23 10.02 44.82 2.29
3515 4144 7.947282 TCAATGAACTATCACATACGGATGTA 58.053 34.615 14.23 2.61 44.82 2.29
3517 4146 7.713764 TTCAATGAACTATCACATACGGATG 57.286 36.000 5.94 5.94 38.69 3.51
3518 4147 8.908786 ATTTCAATGAACTATCACATACGGAT 57.091 30.769 0.00 0.00 38.69 4.18
3519 4148 9.996554 ATATTTCAATGAACTATCACATACGGA 57.003 29.630 0.00 0.00 38.69 4.69
3545 4174 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3546 4175 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3547 4176 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3548 4177 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3549 4178 7.551617 TCCTCCGTTCCTAAATATTTGTCTTTC 59.448 37.037 11.05 0.00 0.00 2.62
3550 4179 7.399634 TCCTCCGTTCCTAAATATTTGTCTTT 58.600 34.615 11.05 0.00 0.00 2.52
3551 4180 6.954232 TCCTCCGTTCCTAAATATTTGTCTT 58.046 36.000 11.05 0.00 0.00 3.01
3552 4181 6.555463 TCCTCCGTTCCTAAATATTTGTCT 57.445 37.500 11.05 0.00 0.00 3.41
3553 4182 6.822170 ACTTCCTCCGTTCCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
3554 4183 6.718294 ACTTCCTCCGTTCCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
3555 4184 7.985752 AGTACTTCCTCCGTTCCTAAATATTTG 59.014 37.037 11.05 1.40 0.00 2.32
3556 4185 8.087303 AGTACTTCCTCCGTTCCTAAATATTT 57.913 34.615 5.89 5.89 0.00 1.40
3557 4186 7.672122 AGTACTTCCTCCGTTCCTAAATATT 57.328 36.000 0.00 0.00 0.00 1.28
3558 4187 7.781693 TGTAGTACTTCCTCCGTTCCTAAATAT 59.218 37.037 0.00 0.00 0.00 1.28
3559 4188 7.118723 TGTAGTACTTCCTCCGTTCCTAAATA 58.881 38.462 0.00 0.00 0.00 1.40
3560 4189 5.954150 TGTAGTACTTCCTCCGTTCCTAAAT 59.046 40.000 0.00 0.00 0.00 1.40
3561 4190 5.324409 TGTAGTACTTCCTCCGTTCCTAAA 58.676 41.667 0.00 0.00 0.00 1.85
3562 4191 4.922206 TGTAGTACTTCCTCCGTTCCTAA 58.078 43.478 0.00 0.00 0.00 2.69
3563 4192 4.225942 TCTGTAGTACTTCCTCCGTTCCTA 59.774 45.833 0.00 0.00 0.00 2.94
3564 4193 3.009916 TCTGTAGTACTTCCTCCGTTCCT 59.990 47.826 0.00 0.00 0.00 3.36
3565 4194 3.350833 TCTGTAGTACTTCCTCCGTTCC 58.649 50.000 0.00 0.00 0.00 3.62
3566 4195 6.054295 TCTATCTGTAGTACTTCCTCCGTTC 58.946 44.000 0.00 0.00 0.00 3.95
3567 4196 5.999044 TCTATCTGTAGTACTTCCTCCGTT 58.001 41.667 0.00 0.00 0.00 4.44
3568 4197 5.366186 TCTCTATCTGTAGTACTTCCTCCGT 59.634 44.000 0.00 0.00 0.00 4.69
3569 4198 5.856156 TCTCTATCTGTAGTACTTCCTCCG 58.144 45.833 0.00 0.00 0.00 4.63
3570 4199 6.206048 GCTTCTCTATCTGTAGTACTTCCTCC 59.794 46.154 0.00 0.00 0.00 4.30
3571 4200 6.996282 AGCTTCTCTATCTGTAGTACTTCCTC 59.004 42.308 0.00 0.00 0.00 3.71
3572 4201 6.770785 CAGCTTCTCTATCTGTAGTACTTCCT 59.229 42.308 0.00 0.00 0.00 3.36
3573 4202 6.514376 GCAGCTTCTCTATCTGTAGTACTTCC 60.514 46.154 0.00 0.00 0.00 3.46
3574 4203 6.038825 TGCAGCTTCTCTATCTGTAGTACTTC 59.961 42.308 0.00 0.00 0.00 3.01
3575 4204 5.888724 TGCAGCTTCTCTATCTGTAGTACTT 59.111 40.000 0.00 0.00 0.00 2.24
3576 4205 5.441500 TGCAGCTTCTCTATCTGTAGTACT 58.558 41.667 0.00 0.00 0.00 2.73
3577 4206 5.759506 TGCAGCTTCTCTATCTGTAGTAC 57.240 43.478 0.00 0.00 0.00 2.73
3607 4236 1.065551 GCGGCATAACATGAACTTCCC 59.934 52.381 0.00 0.00 0.00 3.97
3614 4243 1.016627 GAAGCAGCGGCATAACATGA 58.983 50.000 12.44 0.00 44.61 3.07
3632 4261 4.007581 TCCACCTCCAAGGAGAATATGA 57.992 45.455 17.57 4.13 44.53 2.15
3636 4265 1.849039 CCATCCACCTCCAAGGAGAAT 59.151 52.381 17.57 2.51 44.53 2.40
3648 4281 2.599645 ATCTGCACGCTCCATCCACC 62.600 60.000 0.00 0.00 0.00 4.61
3664 4297 6.604795 CACCCACCAAGAAGAAAATGATATCT 59.395 38.462 3.98 0.00 0.00 1.98
3665 4298 6.183360 CCACCCACCAAGAAGAAAATGATATC 60.183 42.308 0.00 0.00 0.00 1.63
3714 4351 7.782168 TCCCTGTAATTGTATTGGATTAATGCA 59.218 33.333 5.43 5.43 39.23 3.96
3788 4425 0.749454 GGAAGCAGTGGCAGGTATGG 60.749 60.000 0.00 0.00 44.61 2.74
3789 4426 1.091771 CGGAAGCAGTGGCAGGTATG 61.092 60.000 0.00 0.00 44.61 2.39
3896 4538 4.109766 GTTCGTTTTTAAACAAGGCTGCT 58.890 39.130 0.00 0.00 38.81 4.24
3921 4563 6.300703 ACTTTACAAGTTATAACAGGCACCA 58.699 36.000 17.65 0.00 39.04 4.17
3975 4617 6.651225 ACATACAAGGAAGCTTCTACTTTCAC 59.349 38.462 25.05 6.69 0.00 3.18
3978 4620 6.769512 TGACATACAAGGAAGCTTCTACTTT 58.230 36.000 25.05 12.12 0.00 2.66
3983 4625 4.899352 ACTGACATACAAGGAAGCTTCT 57.101 40.909 25.05 8.72 0.00 2.85
3993 4635 3.194755 AGCGTCCACATACTGACATACAA 59.805 43.478 0.00 0.00 0.00 2.41
4004 4646 2.687200 AGGCCCAGCGTCCACATA 60.687 61.111 0.00 0.00 0.00 2.29
4046 4688 0.393808 GCCTTACCCGAAGAATGGCA 60.394 55.000 0.00 0.00 37.33 4.92
4076 4718 4.780815 TGAACACAGTCTGTCAGGAAAAT 58.219 39.130 1.37 0.00 30.29 1.82
4082 4724 4.986875 CAGAATGAACACAGTCTGTCAG 57.013 45.455 16.06 0.00 45.52 3.51
4104 4750 4.340894 TTTATGCATTTCACTCGCTGAC 57.659 40.909 3.54 0.00 0.00 3.51
4158 4804 3.428746 CCACGTTTTGAATTGTGGTGA 57.571 42.857 2.15 0.00 45.34 4.02
4189 4835 2.333926 CACCGTCAACGATAGCTTTCA 58.666 47.619 3.71 0.00 43.02 2.69
4206 4853 4.752661 TTCGTAAGTGTATTTTGCCACC 57.247 40.909 0.00 0.00 39.48 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.