Multiple sequence alignment - TraesCS6B01G312200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G312200 chr6B 100.000 3776 0 0 1 3776 559354454 559358229 0.000000e+00 6974.0
1 TraesCS6B01G312200 chr6B 75.656 1257 260 31 1241 2477 559462881 559464111 5.440000e-163 584.0
2 TraesCS6B01G312200 chr6B 97.753 178 3 1 565 741 713948299 713948476 4.740000e-79 305.0
3 TraesCS6B01G312200 chr6B 93.382 136 8 1 745 880 177568252 177568118 2.300000e-47 200.0
4 TraesCS6B01G312200 chr6B 93.182 88 6 0 478 565 686179085 686178998 3.060000e-26 130.0
5 TraesCS6B01G312200 chr6B 92.222 90 7 0 476 565 295772161 295772250 1.100000e-25 128.0
6 TraesCS6B01G312200 chr6B 88.889 90 7 3 3688 3776 622081065 622080978 1.430000e-19 108.0
7 TraesCS6B01G312200 chr6D 92.409 2134 119 22 890 3013 372821925 372819825 0.000000e+00 3003.0
8 TraesCS6B01G312200 chr6D 92.561 820 47 9 2907 3714 372819223 372818406 0.000000e+00 1164.0
9 TraesCS6B01G312200 chr6D 76.111 1260 251 34 1240 2477 372768450 372769681 6.930000e-172 614.0
10 TraesCS6B01G312200 chr6D 75.935 1230 254 34 1242 2461 372785916 372784719 9.030000e-166 593.0
11 TraesCS6B01G312200 chr6D 74.584 1381 262 50 1135 2477 373229711 373228382 1.200000e-144 523.0
12 TraesCS6B01G312200 chr6D 82.877 584 82 9 3142 3718 372819817 372819245 3.370000e-140 508.0
13 TraesCS6B01G312200 chr6D 95.177 311 9 5 171 479 372822249 372821943 1.580000e-133 486.0
14 TraesCS6B01G312200 chr6A 94.746 1637 74 7 888 2518 514679569 514677939 0.000000e+00 2536.0
15 TraesCS6B01G312200 chr6A 77.196 1241 243 27 1251 2477 514493637 514492423 0.000000e+00 688.0
16 TraesCS6B01G312200 chr6A 81.911 586 86 11 3142 3718 514677481 514676907 9.490000e-131 477.0
17 TraesCS6B01G312200 chr6A 84.817 382 31 8 2656 3013 514677867 514677489 3.590000e-95 359.0
18 TraesCS6B01G312200 chr6A 98.919 185 1 1 564 747 70570997 70570813 2.810000e-86 329.0
19 TraesCS6B01G312200 chr6A 98.901 182 2 0 563 744 326797735 326797554 3.640000e-85 326.0
20 TraesCS6B01G312200 chr6A 87.543 289 19 7 199 479 514679858 514679579 6.090000e-83 318.0
21 TraesCS6B01G312200 chr6A 95.652 69 3 0 3708 3776 135722915 135722847 1.110000e-20 111.0
22 TraesCS6B01G312200 chr6A 93.151 73 5 0 2548 2620 514677941 514677869 1.430000e-19 108.0
23 TraesCS6B01G312200 chr2D 95.747 964 41 0 1402 2365 637375668 637374705 0.000000e+00 1554.0
24 TraesCS6B01G312200 chr7A 75.169 1184 248 34 1288 2442 679594637 679593471 2.010000e-142 516.0
25 TraesCS6B01G312200 chr7A 75.063 1195 242 45 1285 2442 679531617 679530442 4.350000e-139 505.0
26 TraesCS6B01G312200 chr7A 74.576 1239 263 37 1271 2477 679230005 679231223 2.620000e-136 496.0
27 TraesCS6B01G312200 chr7A 77.574 437 90 7 2032 2464 679535989 679535557 1.350000e-64 257.0
28 TraesCS6B01G312200 chr7A 94.853 136 5 1 745 880 194051397 194051264 1.060000e-50 211.0
29 TraesCS6B01G312200 chr7A 93.382 136 7 1 745 880 594414133 594414000 2.300000e-47 200.0
30 TraesCS6B01G312200 chr7A 90.244 82 6 2 3696 3776 561204777 561204857 5.160000e-19 106.0
31 TraesCS6B01G312200 chr7D 74.833 1200 252 34 1271 2439 587302185 587303365 7.280000e-137 497.0
32 TraesCS6B01G312200 chr5A 97.927 193 1 3 555 746 659880927 659881117 7.820000e-87 331.0
33 TraesCS6B01G312200 chr2B 97.222 180 2 2 565 744 511131674 511131498 6.130000e-78 302.0
34 TraesCS6B01G312200 chr2B 94.318 88 5 0 478 565 496539887 496539800 6.580000e-28 135.0
35 TraesCS6B01G312200 chr2B 90.588 85 6 2 3693 3776 139466666 139466583 1.110000e-20 111.0
36 TraesCS6B01G312200 chr2B 91.358 81 4 3 3697 3776 494853886 494853964 1.430000e-19 108.0
37 TraesCS6B01G312200 chr2A 95.187 187 7 2 560 744 14573005 14572819 1.030000e-75 294.0
38 TraesCS6B01G312200 chr2A 95.135 185 7 2 564 747 15815006 15814823 1.330000e-74 291.0
39 TraesCS6B01G312200 chr2A 95.580 181 7 1 562 741 15364180 15364360 4.770000e-74 289.0
40 TraesCS6B01G312200 chr2A 96.067 178 5 2 565 741 15369372 15369548 4.770000e-74 289.0
41 TraesCS6B01G312200 chr3B 94.118 136 6 1 745 880 443703174 443703307 4.940000e-49 206.0
42 TraesCS6B01G312200 chr3B 93.182 88 6 0 478 565 561696271 561696184 3.060000e-26 130.0
43 TraesCS6B01G312200 chr1B 94.118 136 7 1 745 880 363919 363785 4.940000e-49 206.0
44 TraesCS6B01G312200 chr1B 93.382 136 6 1 745 880 12257616 12257484 8.270000e-47 198.0
45 TraesCS6B01G312200 chr1B 98.485 66 1 0 3711 3776 123493170 123493235 2.380000e-22 117.0
46 TraesCS6B01G312200 chr1B 97.059 68 2 0 3709 3776 190726465 190726532 8.570000e-22 115.0
47 TraesCS6B01G312200 chr1B 90.698 43 3 1 3190 3231 440279609 440279651 5.270000e-04 56.5
48 TraesCS6B01G312200 chr7B 94.118 136 5 3 745 880 96602311 96602443 1.780000e-48 204.0
49 TraesCS6B01G312200 chr7B 93.431 137 6 2 745 880 577223931 577223797 2.300000e-47 200.0
50 TraesCS6B01G312200 chr7B 94.318 88 5 0 478 565 367495737 367495824 6.580000e-28 135.0
51 TraesCS6B01G312200 chr7B 92.308 91 6 1 475 564 100224604 100224694 1.100000e-25 128.0
52 TraesCS6B01G312200 chr5B 93.382 136 9 0 745 880 355402718 355402853 6.400000e-48 202.0
53 TraesCS6B01G312200 chr3D 95.455 88 4 0 478 565 274728306 274728393 1.410000e-29 141.0
54 TraesCS6B01G312200 chr3D 93.182 88 6 0 478 565 520444640 520444553 3.060000e-26 130.0
55 TraesCS6B01G312200 chr4A 93.258 89 6 0 477 565 700735881 700735793 8.510000e-27 132.0
56 TraesCS6B01G312200 chr4B 94.595 74 4 0 3703 3776 512807660 512807733 8.570000e-22 115.0
57 TraesCS6B01G312200 chr3A 95.652 69 3 0 3708 3776 679852768 679852836 1.110000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G312200 chr6B 559354454 559358229 3775 False 6974.00 6974 100.0000 1 3776 1 chr6B.!!$F2 3775
1 TraesCS6B01G312200 chr6B 559462881 559464111 1230 False 584.00 584 75.6560 1241 2477 1 chr6B.!!$F3 1236
2 TraesCS6B01G312200 chr6D 372818406 372822249 3843 True 1290.25 3003 90.7560 171 3718 4 chr6D.!!$R3 3547
3 TraesCS6B01G312200 chr6D 372768450 372769681 1231 False 614.00 614 76.1110 1240 2477 1 chr6D.!!$F1 1237
4 TraesCS6B01G312200 chr6D 372784719 372785916 1197 True 593.00 593 75.9350 1242 2461 1 chr6D.!!$R1 1219
5 TraesCS6B01G312200 chr6D 373228382 373229711 1329 True 523.00 523 74.5840 1135 2477 1 chr6D.!!$R2 1342
6 TraesCS6B01G312200 chr6A 514676907 514679858 2951 True 759.60 2536 88.4336 199 3718 5 chr6A.!!$R5 3519
7 TraesCS6B01G312200 chr6A 514492423 514493637 1214 True 688.00 688 77.1960 1251 2477 1 chr6A.!!$R4 1226
8 TraesCS6B01G312200 chr2D 637374705 637375668 963 True 1554.00 1554 95.7470 1402 2365 1 chr2D.!!$R1 963
9 TraesCS6B01G312200 chr7A 679593471 679594637 1166 True 516.00 516 75.1690 1288 2442 1 chr7A.!!$R3 1154
10 TraesCS6B01G312200 chr7A 679230005 679231223 1218 False 496.00 496 74.5760 1271 2477 1 chr7A.!!$F2 1206
11 TraesCS6B01G312200 chr7A 679530442 679535989 5547 True 381.00 505 76.3185 1285 2464 2 chr7A.!!$R4 1179
12 TraesCS6B01G312200 chr7D 587302185 587303365 1180 False 497.00 497 74.8330 1271 2439 1 chr7D.!!$F1 1168

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
725 737 0.110328 TTCGCGAAGTCTCAGTCGAC 60.110 55.0 19.38 7.7 39.64 4.20 F
1512 4604 0.034337 ACGTCATAACTGTGGGCGTT 59.966 50.0 1.92 0.0 31.16 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2524 5679 0.751277 CCTTGTGGAGTTGTGGTGCA 60.751 55.0 0.0 0.0 34.57 4.57 R
3068 6959 0.185901 TTCTGGGGATATGCAAGGCC 59.814 55.0 0.0 0.0 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.005192 GGATGATCTCTTTTAAATGGAAGCTT 57.995 34.615 0.00 0.00 0.00 3.74
26 27 8.134261 GGATGATCTCTTTTAAATGGAAGCTTC 58.866 37.037 18.54 18.54 0.00 3.86
27 28 8.585471 ATGATCTCTTTTAAATGGAAGCTTCA 57.415 30.769 27.02 13.98 0.00 3.02
28 29 8.408043 TGATCTCTTTTAAATGGAAGCTTCAA 57.592 30.769 27.02 17.90 0.00 2.69
29 30 8.859090 TGATCTCTTTTAAATGGAAGCTTCAAA 58.141 29.630 27.02 15.44 0.00 2.69
30 31 9.866798 GATCTCTTTTAAATGGAAGCTTCAAAT 57.133 29.630 27.02 16.91 0.00 2.32
31 32 9.649167 ATCTCTTTTAAATGGAAGCTTCAAATG 57.351 29.630 27.02 18.26 0.00 2.32
32 33 8.090214 TCTCTTTTAAATGGAAGCTTCAAATGG 58.910 33.333 27.02 13.44 0.00 3.16
33 34 7.160726 TCTTTTAAATGGAAGCTTCAAATGGG 58.839 34.615 27.02 11.47 0.00 4.00
34 35 3.986996 AAATGGAAGCTTCAAATGGGG 57.013 42.857 27.02 0.00 0.00 4.96
35 36 1.870064 ATGGAAGCTTCAAATGGGGG 58.130 50.000 27.02 0.00 0.00 5.40
36 37 0.904394 TGGAAGCTTCAAATGGGGGC 60.904 55.000 27.02 7.62 0.00 5.80
37 38 0.615827 GGAAGCTTCAAATGGGGGCT 60.616 55.000 27.02 0.00 34.52 5.19
39 40 1.269958 AAGCTTCAAATGGGGGCTTC 58.730 50.000 0.00 0.00 38.64 3.86
40 41 0.114954 AGCTTCAAATGGGGGCTTCA 59.885 50.000 0.00 0.00 0.00 3.02
41 42 1.197812 GCTTCAAATGGGGGCTTCAT 58.802 50.000 0.00 0.00 0.00 2.57
42 43 1.137675 GCTTCAAATGGGGGCTTCATC 59.862 52.381 0.00 0.00 0.00 2.92
44 45 0.331278 TCAAATGGGGGCTTCATCGT 59.669 50.000 0.00 0.00 0.00 3.73
45 46 1.185315 CAAATGGGGGCTTCATCGTT 58.815 50.000 0.00 0.00 0.00 3.85
46 47 1.550072 CAAATGGGGGCTTCATCGTTT 59.450 47.619 0.00 0.00 0.00 3.60
47 48 1.474330 AATGGGGGCTTCATCGTTTC 58.526 50.000 0.00 0.00 0.00 2.78
48 49 0.395724 ATGGGGGCTTCATCGTTTCC 60.396 55.000 0.00 0.00 0.00 3.13
50 51 2.112815 GGGGCTTCATCGTTTCCCG 61.113 63.158 0.00 0.00 37.85 5.14
51 52 1.376812 GGGCTTCATCGTTTCCCGT 60.377 57.895 0.00 0.00 37.94 5.28
52 53 1.644786 GGGCTTCATCGTTTCCCGTG 61.645 60.000 0.00 0.00 37.94 4.94
53 54 0.672401 GGCTTCATCGTTTCCCGTGA 60.672 55.000 0.00 0.00 37.94 4.35
55 56 1.076332 CTTCATCGTTTCCCGTGACC 58.924 55.000 0.00 0.00 37.94 4.02
56 57 0.682852 TTCATCGTTTCCCGTGACCT 59.317 50.000 0.00 0.00 37.94 3.85
59 60 0.682852 ATCGTTTCCCGTGACCTCAA 59.317 50.000 0.00 0.00 37.94 3.02
60 61 0.682852 TCGTTTCCCGTGACCTCAAT 59.317 50.000 0.00 0.00 37.94 2.57
62 63 1.337823 CGTTTCCCGTGACCTCAATCT 60.338 52.381 0.00 0.00 0.00 2.40
63 64 2.779506 GTTTCCCGTGACCTCAATCTT 58.220 47.619 0.00 0.00 0.00 2.40
64 65 2.742589 GTTTCCCGTGACCTCAATCTTC 59.257 50.000 0.00 0.00 0.00 2.87
65 66 1.938585 TCCCGTGACCTCAATCTTCT 58.061 50.000 0.00 0.00 0.00 2.85
66 67 3.095912 TCCCGTGACCTCAATCTTCTA 57.904 47.619 0.00 0.00 0.00 2.10
68 69 4.800023 TCCCGTGACCTCAATCTTCTATA 58.200 43.478 0.00 0.00 0.00 1.31
69 70 5.394738 TCCCGTGACCTCAATCTTCTATAT 58.605 41.667 0.00 0.00 0.00 0.86
70 71 6.549242 TCCCGTGACCTCAATCTTCTATATA 58.451 40.000 0.00 0.00 0.00 0.86
71 72 7.008332 TCCCGTGACCTCAATCTTCTATATAA 58.992 38.462 0.00 0.00 0.00 0.98
72 73 7.176865 TCCCGTGACCTCAATCTTCTATATAAG 59.823 40.741 0.00 0.00 0.00 1.73
74 75 7.810282 CCGTGACCTCAATCTTCTATATAAGTG 59.190 40.741 0.00 0.00 0.00 3.16
77 78 8.928448 TGACCTCAATCTTCTATATAAGTGCTT 58.072 33.333 0.00 0.00 0.00 3.91
78 79 9.202273 GACCTCAATCTTCTATATAAGTGCTTG 57.798 37.037 0.00 2.61 0.00 4.01
79 80 7.659390 ACCTCAATCTTCTATATAAGTGCTTGC 59.341 37.037 0.00 0.00 0.00 4.01
80 81 7.148672 CCTCAATCTTCTATATAAGTGCTTGCG 60.149 40.741 0.00 0.00 0.00 4.85
81 82 7.210174 TCAATCTTCTATATAAGTGCTTGCGT 58.790 34.615 0.00 0.00 0.00 5.24
82 83 7.382488 TCAATCTTCTATATAAGTGCTTGCGTC 59.618 37.037 0.00 0.00 0.00 5.19
83 84 6.392625 TCTTCTATATAAGTGCTTGCGTCT 57.607 37.500 0.00 0.00 0.00 4.18
84 85 7.506328 TCTTCTATATAAGTGCTTGCGTCTA 57.494 36.000 0.00 0.00 0.00 2.59
86 87 8.023706 TCTTCTATATAAGTGCTTGCGTCTATG 58.976 37.037 0.00 0.00 0.00 2.23
87 88 7.215719 TCTATATAAGTGCTTGCGTCTATGT 57.784 36.000 0.00 0.00 0.00 2.29
88 89 7.084486 TCTATATAAGTGCTTGCGTCTATGTG 58.916 38.462 0.00 0.00 0.00 3.21
89 90 0.798776 AAGTGCTTGCGTCTATGTGC 59.201 50.000 0.00 0.00 0.00 4.57
90 91 0.320683 AGTGCTTGCGTCTATGTGCA 60.321 50.000 0.00 0.00 39.81 4.57
91 92 0.729116 GTGCTTGCGTCTATGTGCAT 59.271 50.000 0.00 0.00 41.42 3.96
92 93 0.728542 TGCTTGCGTCTATGTGCATG 59.271 50.000 0.00 0.00 41.42 4.06
93 94 0.729116 GCTTGCGTCTATGTGCATGT 59.271 50.000 0.00 0.00 41.42 3.21
95 96 0.447406 TTGCGTCTATGTGCATGTGC 59.553 50.000 0.00 0.00 41.42 4.57
109 110 2.028748 GCATGTGCATTGAAAGAACCCT 60.029 45.455 0.00 0.00 41.59 4.34
110 111 3.581755 CATGTGCATTGAAAGAACCCTG 58.418 45.455 0.00 0.00 0.00 4.45
113 114 2.028748 GTGCATTGAAAGAACCCTGCAT 60.029 45.455 0.00 0.00 41.17 3.96
115 116 2.231964 GCATTGAAAGAACCCTGCATGA 59.768 45.455 0.00 0.00 0.00 3.07
116 117 3.306225 GCATTGAAAGAACCCTGCATGAA 60.306 43.478 0.00 0.00 0.00 2.57
117 118 4.800249 GCATTGAAAGAACCCTGCATGAAA 60.800 41.667 0.00 0.00 0.00 2.69
118 119 5.484715 CATTGAAAGAACCCTGCATGAAAT 58.515 37.500 0.00 0.00 0.00 2.17
121 122 3.967332 AAGAACCCTGCATGAAATTGG 57.033 42.857 0.00 0.00 0.00 3.16
122 123 2.181975 AGAACCCTGCATGAAATTGGG 58.818 47.619 0.00 3.46 43.26 4.12
124 125 0.413037 ACCCTGCATGAAATTGGGGA 59.587 50.000 10.18 0.00 42.00 4.81
125 126 1.008693 ACCCTGCATGAAATTGGGGAT 59.991 47.619 10.18 0.00 42.00 3.85
126 127 2.121129 CCCTGCATGAAATTGGGGATT 58.879 47.619 0.00 0.00 36.17 3.01
128 129 3.710677 CCCTGCATGAAATTGGGGATTAA 59.289 43.478 0.00 0.00 36.17 1.40
129 130 4.163839 CCCTGCATGAAATTGGGGATTAAA 59.836 41.667 0.00 0.00 36.17 1.52
130 131 5.163174 CCCTGCATGAAATTGGGGATTAAAT 60.163 40.000 0.00 0.00 36.17 1.40
153 154 7.839680 ATCCATCAAACCTTTTTGTACTTCT 57.160 32.000 0.00 0.00 42.51 2.85
154 155 7.272037 TCCATCAAACCTTTTTGTACTTCTC 57.728 36.000 0.00 0.00 42.51 2.87
155 156 6.264518 TCCATCAAACCTTTTTGTACTTCTCC 59.735 38.462 0.00 0.00 42.51 3.71
156 157 6.265422 CCATCAAACCTTTTTGTACTTCTCCT 59.735 38.462 0.00 0.00 42.51 3.69
157 158 7.201911 CCATCAAACCTTTTTGTACTTCTCCTT 60.202 37.037 0.00 0.00 42.51 3.36
159 160 8.810990 TCAAACCTTTTTGTACTTCTCCTTAA 57.189 30.769 0.00 0.00 42.51 1.85
160 161 9.416284 TCAAACCTTTTTGTACTTCTCCTTAAT 57.584 29.630 0.00 0.00 42.51 1.40
163 164 8.405418 ACCTTTTTGTACTTCTCCTTAATTCC 57.595 34.615 0.00 0.00 0.00 3.01
164 165 7.450634 ACCTTTTTGTACTTCTCCTTAATTCCC 59.549 37.037 0.00 0.00 0.00 3.97
165 166 7.450323 CCTTTTTGTACTTCTCCTTAATTCCCA 59.550 37.037 0.00 0.00 0.00 4.37
167 168 8.770010 TTTTGTACTTCTCCTTAATTCCCAAA 57.230 30.769 0.00 0.00 0.00 3.28
168 169 8.770010 TTTGTACTTCTCCTTAATTCCCAAAA 57.230 30.769 0.00 0.00 0.00 2.44
170 171 8.950007 TGTACTTCTCCTTAATTCCCAAAAAT 57.050 30.769 0.00 0.00 0.00 1.82
174 175 9.768215 ACTTCTCCTTAATTCCCAAAAATATGA 57.232 29.630 0.00 0.00 0.00 2.15
208 209 4.248859 CACTCATCTTTCCTACCACACAG 58.751 47.826 0.00 0.00 0.00 3.66
211 212 5.071788 ACTCATCTTTCCTACCACACAGAAA 59.928 40.000 0.00 0.00 0.00 2.52
212 213 6.126863 TCATCTTTCCTACCACACAGAAAT 57.873 37.500 0.00 0.00 0.00 2.17
213 214 5.939883 TCATCTTTCCTACCACACAGAAATG 59.060 40.000 0.00 0.00 0.00 2.32
217 218 7.284074 TCTTTCCTACCACACAGAAATGTTTA 58.716 34.615 0.00 0.00 0.00 2.01
329 333 0.878523 CGAACAGCCGAACACCTTCA 60.879 55.000 0.00 0.00 0.00 3.02
479 491 1.988107 AGACTGAGCCTTCCATTTGGA 59.012 47.619 0.00 0.00 43.73 3.53
480 492 2.026449 AGACTGAGCCTTCCATTTGGAG 60.026 50.000 0.00 0.00 46.36 3.86
482 494 2.376518 ACTGAGCCTTCCATTTGGAGAA 59.623 45.455 0.00 0.00 46.36 2.87
483 495 3.015327 CTGAGCCTTCCATTTGGAGAAG 58.985 50.000 0.00 0.00 46.36 2.85
486 498 4.264083 TGAGCCTTCCATTTGGAGAAGAAT 60.264 41.667 0.00 0.00 46.36 2.40
488 500 4.708909 AGCCTTCCATTTGGAGAAGAATTC 59.291 41.667 0.00 0.00 46.36 2.17
503 515 6.478512 GAAGAATTCTATGAGACCAGGTCT 57.521 41.667 23.18 23.18 43.39 3.85
510 522 2.526628 AGACCAGGTCTCACGGGT 59.473 61.111 17.31 0.00 38.71 5.28
513 525 0.531200 GACCAGGTCTCACGGGTTAG 59.469 60.000 12.94 0.00 32.77 2.34
514 526 0.178941 ACCAGGTCTCACGGGTTAGT 60.179 55.000 0.00 0.00 0.00 2.24
515 527 1.076024 ACCAGGTCTCACGGGTTAGTA 59.924 52.381 0.00 0.00 0.00 1.82
516 528 1.749634 CCAGGTCTCACGGGTTAGTAG 59.250 57.143 0.00 0.00 0.00 2.57
517 529 2.619849 CCAGGTCTCACGGGTTAGTAGA 60.620 54.545 0.00 0.00 0.00 2.59
518 530 3.288964 CAGGTCTCACGGGTTAGTAGAT 58.711 50.000 0.00 0.00 0.00 1.98
520 532 3.053842 AGGTCTCACGGGTTAGTAGATGA 60.054 47.826 0.00 0.00 0.00 2.92
521 533 3.315749 GGTCTCACGGGTTAGTAGATGAG 59.684 52.174 0.00 0.00 35.87 2.90
524 536 3.285484 TCACGGGTTAGTAGATGAGACC 58.715 50.000 0.00 0.00 0.00 3.85
525 537 2.361438 CACGGGTTAGTAGATGAGACCC 59.639 54.545 0.00 0.00 45.19 4.46
547 559 3.548745 TCCTGATGGATGTCATGTGAC 57.451 47.619 6.21 6.21 40.37 3.67
566 578 4.984161 GTGACATTCACAAATCACAAAGGG 59.016 41.667 1.34 0.00 46.22 3.95
567 579 4.648762 TGACATTCACAAATCACAAAGGGT 59.351 37.500 0.00 0.00 0.00 4.34
568 580 5.128499 TGACATTCACAAATCACAAAGGGTT 59.872 36.000 0.00 0.00 0.00 4.11
569 581 5.988287 ACATTCACAAATCACAAAGGGTTT 58.012 33.333 0.00 0.00 0.00 3.27
582 594 4.319177 CAAAGGGTTTGTCTAGGTCTCAG 58.681 47.826 0.00 0.00 35.94 3.35
583 595 3.261818 AGGGTTTGTCTAGGTCTCAGT 57.738 47.619 0.00 0.00 0.00 3.41
584 596 3.166679 AGGGTTTGTCTAGGTCTCAGTC 58.833 50.000 0.00 0.00 0.00 3.51
585 597 2.094649 GGGTTTGTCTAGGTCTCAGTCG 60.095 54.545 0.00 0.00 0.00 4.18
587 599 3.366171 GGTTTGTCTAGGTCTCAGTCGAC 60.366 52.174 7.70 7.70 0.00 4.20
588 600 3.420300 TTGTCTAGGTCTCAGTCGACT 57.580 47.619 13.58 13.58 34.38 4.18
589 601 2.701107 TGTCTAGGTCTCAGTCGACTG 58.299 52.381 34.76 34.76 45.08 3.51
599 611 4.044024 GTCGACTGAGACTTCGCG 57.956 61.111 8.70 0.00 38.09 5.87
600 612 1.496393 GTCGACTGAGACTTCGCGA 59.504 57.895 3.71 3.71 38.09 5.87
602 614 0.166161 TCGACTGAGACTTCGCGAAG 59.834 55.000 39.55 39.55 43.79 3.79
612 624 2.051879 CTTCGCGAAGTCTCAGTCAA 57.948 50.000 34.97 4.60 33.87 3.18
614 626 0.387367 TCGCGAAGTCTCAGTCAAGC 60.387 55.000 6.20 0.00 0.00 4.01
615 627 0.664466 CGCGAAGTCTCAGTCAAGCA 60.664 55.000 0.00 0.00 0.00 3.91
616 628 1.502231 GCGAAGTCTCAGTCAAGCAA 58.498 50.000 0.00 0.00 0.00 3.91
617 629 2.072298 GCGAAGTCTCAGTCAAGCAAT 58.928 47.619 0.00 0.00 0.00 3.56
618 630 2.159734 GCGAAGTCTCAGTCAAGCAATG 60.160 50.000 0.00 0.00 0.00 2.82
619 631 3.062763 CGAAGTCTCAGTCAAGCAATGT 58.937 45.455 0.00 0.00 0.00 2.71
620 632 4.237724 CGAAGTCTCAGTCAAGCAATGTA 58.762 43.478 0.00 0.00 0.00 2.29
621 633 4.325741 CGAAGTCTCAGTCAAGCAATGTAG 59.674 45.833 0.00 0.00 0.00 2.74
622 634 4.881019 AGTCTCAGTCAAGCAATGTAGT 57.119 40.909 0.00 0.00 0.00 2.73
624 636 6.537453 AGTCTCAGTCAAGCAATGTAGTAT 57.463 37.500 0.00 0.00 0.00 2.12
625 637 6.336566 AGTCTCAGTCAAGCAATGTAGTATG 58.663 40.000 0.00 0.00 0.00 2.39
626 638 5.006165 GTCTCAGTCAAGCAATGTAGTATGC 59.994 44.000 0.00 0.00 42.87 3.14
627 639 4.831107 TCAGTCAAGCAATGTAGTATGCA 58.169 39.130 0.00 0.00 44.95 3.96
629 641 5.352293 TCAGTCAAGCAATGTAGTATGCAAG 59.648 40.000 0.00 0.00 44.95 4.01
632 644 6.093219 AGTCAAGCAATGTAGTATGCAAGAAG 59.907 38.462 0.00 0.00 44.95 2.85
633 645 6.092670 GTCAAGCAATGTAGTATGCAAGAAGA 59.907 38.462 0.00 0.00 44.95 2.87
636 648 7.452880 AGCAATGTAGTATGCAAGAAGAAAA 57.547 32.000 0.00 0.00 44.95 2.29
637 649 7.533426 AGCAATGTAGTATGCAAGAAGAAAAG 58.467 34.615 0.00 0.00 44.95 2.27
640 652 9.897744 CAATGTAGTATGCAAGAAGAAAAGAAA 57.102 29.630 0.00 0.00 31.62 2.52
642 654 9.899226 ATGTAGTATGCAAGAAGAAAAGAAAAC 57.101 29.630 0.00 0.00 31.62 2.43
643 655 9.120538 TGTAGTATGCAAGAAGAAAAGAAAACT 57.879 29.630 0.00 0.00 0.00 2.66
645 657 8.225603 AGTATGCAAGAAGAAAAGAAAACTGA 57.774 30.769 0.00 0.00 0.00 3.41
646 658 8.686334 AGTATGCAAGAAGAAAAGAAAACTGAA 58.314 29.630 0.00 0.00 0.00 3.02
648 660 8.776376 ATGCAAGAAGAAAAGAAAACTGAAAA 57.224 26.923 0.00 0.00 0.00 2.29
649 661 8.600449 TGCAAGAAGAAAAGAAAACTGAAAAA 57.400 26.923 0.00 0.00 0.00 1.94
673 685 8.844441 AAAAATTGTTTGCACAAATCTCAATG 57.156 26.923 9.74 0.00 46.17 2.82
674 686 5.600908 ATTGTTTGCACAAATCTCAATGC 57.399 34.783 8.70 0.00 46.17 3.56
675 687 4.056092 TGTTTGCACAAATCTCAATGCA 57.944 36.364 0.00 0.00 45.94 3.96
679 691 4.794278 TGCACAAATCTCAATGCAAGAT 57.206 36.364 0.00 0.00 44.72 2.40
680 692 4.740268 TGCACAAATCTCAATGCAAGATC 58.260 39.130 0.00 0.00 44.72 2.75
682 694 5.165676 GCACAAATCTCAATGCAAGATCAA 58.834 37.500 0.00 0.00 38.00 2.57
683 695 5.061808 GCACAAATCTCAATGCAAGATCAAC 59.938 40.000 0.00 0.00 38.00 3.18
684 696 6.153756 CACAAATCTCAATGCAAGATCAACA 58.846 36.000 0.00 0.00 32.29 3.33
685 697 6.308041 CACAAATCTCAATGCAAGATCAACAG 59.692 38.462 0.00 0.00 32.29 3.16
686 698 6.208007 ACAAATCTCAATGCAAGATCAACAGA 59.792 34.615 0.00 0.00 32.29 3.41
687 699 7.093902 ACAAATCTCAATGCAAGATCAACAGAT 60.094 33.333 0.00 0.00 32.29 2.90
688 700 7.406031 AATCTCAATGCAAGATCAACAGATT 57.594 32.000 0.00 0.00 32.29 2.40
689 701 6.190954 TCTCAATGCAAGATCAACAGATTG 57.809 37.500 0.00 0.00 37.14 2.67
690 702 5.708697 TCTCAATGCAAGATCAACAGATTGT 59.291 36.000 0.00 0.00 37.11 2.71
693 705 6.656270 TCAATGCAAGATCAACAGATTGTAGT 59.344 34.615 0.00 0.00 37.11 2.73
694 706 7.823799 TCAATGCAAGATCAACAGATTGTAGTA 59.176 33.333 0.00 0.00 37.11 1.82
695 707 8.618677 CAATGCAAGATCAACAGATTGTAGTAT 58.381 33.333 0.00 0.00 37.11 2.12
696 708 7.776933 TGCAAGATCAACAGATTGTAGTATC 57.223 36.000 0.00 0.00 37.11 2.24
697 709 6.476706 TGCAAGATCAACAGATTGTAGTATCG 59.523 38.462 0.00 0.00 37.11 2.92
698 710 6.697455 GCAAGATCAACAGATTGTAGTATCGA 59.303 38.462 0.00 0.00 37.11 3.59
699 711 7.306283 GCAAGATCAACAGATTGTAGTATCGAC 60.306 40.741 0.00 0.00 37.11 4.20
700 712 7.575414 AGATCAACAGATTGTAGTATCGACT 57.425 36.000 0.00 0.00 37.11 4.18
701 713 7.421599 AGATCAACAGATTGTAGTATCGACTG 58.578 38.462 0.00 0.00 37.11 3.51
703 715 6.786207 TCAACAGATTGTAGTATCGACTGAG 58.214 40.000 0.00 0.00 37.11 3.35
704 716 6.598064 TCAACAGATTGTAGTATCGACTGAGA 59.402 38.462 0.00 0.00 37.11 3.27
705 717 6.366315 ACAGATTGTAGTATCGACTGAGAC 57.634 41.667 0.00 0.00 36.28 3.36
709 721 5.466432 TTGTAGTATCGACTGAGACTTCG 57.534 43.478 0.00 0.00 43.97 3.79
711 723 1.328069 AGTATCGACTGAGACTTCGCG 59.672 52.381 0.00 0.00 43.97 5.87
712 724 1.326852 GTATCGACTGAGACTTCGCGA 59.673 52.381 3.71 3.71 33.52 5.87
713 725 0.803117 ATCGACTGAGACTTCGCGAA 59.197 50.000 22.01 22.01 35.15 4.70
723 735 2.631303 CTTCGCGAAGTCTCAGTCG 58.369 57.895 34.97 12.16 40.24 4.18
724 736 0.166161 CTTCGCGAAGTCTCAGTCGA 59.834 55.000 34.97 4.60 39.64 4.20
725 737 0.110328 TTCGCGAAGTCTCAGTCGAC 60.110 55.000 19.38 7.70 39.64 4.20
726 738 0.949588 TCGCGAAGTCTCAGTCGACT 60.950 55.000 13.58 13.58 45.73 4.18
741 753 5.385617 CAGTCGACTGATTTTTAGCAAAGG 58.614 41.667 36.73 6.86 46.59 3.11
742 754 4.083271 AGTCGACTGATTTTTAGCAAAGGC 60.083 41.667 19.30 0.00 41.61 4.35
745 757 6.762651 TCGACTGATTTTTAGCAAAGGCGAA 61.763 40.000 0.00 0.00 41.86 4.70
746 758 8.002143 TCGACTGATTTTTAGCAAAGGCGAAT 62.002 38.462 0.00 0.00 41.86 3.34
747 759 9.670279 TCGACTGATTTTTAGCAAAGGCGAATC 62.670 40.741 0.00 0.00 41.86 2.52
754 766 1.063031 GCAAAGGCGAATCACAAAGC 58.937 50.000 0.00 0.00 0.00 3.51
757 769 2.919229 CAAAGGCGAATCACAAAGCATC 59.081 45.455 0.00 0.00 0.00 3.91
758 770 2.119801 AGGCGAATCACAAAGCATCT 57.880 45.000 0.00 0.00 0.00 2.90
760 772 2.939103 AGGCGAATCACAAAGCATCTAC 59.061 45.455 0.00 0.00 0.00 2.59
761 773 2.032178 GGCGAATCACAAAGCATCTACC 59.968 50.000 0.00 0.00 0.00 3.18
762 774 2.032178 GCGAATCACAAAGCATCTACCC 59.968 50.000 0.00 0.00 0.00 3.69
765 777 2.489938 TCACAAAGCATCTACCCCAC 57.510 50.000 0.00 0.00 0.00 4.61
766 778 1.004277 TCACAAAGCATCTACCCCACC 59.996 52.381 0.00 0.00 0.00 4.61
767 779 0.331616 ACAAAGCATCTACCCCACCC 59.668 55.000 0.00 0.00 0.00 4.61
769 781 1.921869 AAAGCATCTACCCCACCCCG 61.922 60.000 0.00 0.00 0.00 5.73
770 782 4.564110 GCATCTACCCCACCCCGC 62.564 72.222 0.00 0.00 0.00 6.13
771 783 3.087253 CATCTACCCCACCCCGCA 61.087 66.667 0.00 0.00 0.00 5.69
772 784 3.087906 ATCTACCCCACCCCGCAC 61.088 66.667 0.00 0.00 0.00 5.34
780 792 2.046285 CCACCCCGCACCTGAAATC 61.046 63.158 0.00 0.00 0.00 2.17
782 794 1.002134 ACCCCGCACCTGAAATCAG 60.002 57.895 3.37 3.37 43.40 2.90
791 803 3.027533 CTGAAATCAGGGGAGGGGA 57.972 57.895 2.38 0.00 40.20 4.81
793 805 0.421495 TGAAATCAGGGGAGGGGAGA 59.579 55.000 0.00 0.00 0.00 3.71
794 806 1.135960 GAAATCAGGGGAGGGGAGAG 58.864 60.000 0.00 0.00 0.00 3.20
795 807 0.725133 AAATCAGGGGAGGGGAGAGA 59.275 55.000 0.00 0.00 0.00 3.10
796 808 0.955752 AATCAGGGGAGGGGAGAGAT 59.044 55.000 0.00 0.00 0.00 2.75
800 812 1.505538 CAGGGGAGGGGAGAGATTAGA 59.494 57.143 0.00 0.00 0.00 2.10
801 813 2.113414 CAGGGGAGGGGAGAGATTAGAT 59.887 54.545 0.00 0.00 0.00 1.98
802 814 2.113414 AGGGGAGGGGAGAGATTAGATG 59.887 54.545 0.00 0.00 0.00 2.90
804 816 2.494439 GGGAGGGGAGAGATTAGATGCT 60.494 54.545 0.00 0.00 0.00 3.79
806 818 3.650461 GGAGGGGAGAGATTAGATGCTTT 59.350 47.826 0.00 0.00 0.00 3.51
807 819 4.504689 GGAGGGGAGAGATTAGATGCTTTG 60.505 50.000 0.00 0.00 0.00 2.77
808 820 4.043596 AGGGGAGAGATTAGATGCTTTGT 58.956 43.478 0.00 0.00 0.00 2.83
809 821 4.133078 GGGGAGAGATTAGATGCTTTGTG 58.867 47.826 0.00 0.00 0.00 3.33
811 823 5.455899 GGGGAGAGATTAGATGCTTTGTGAT 60.456 44.000 0.00 0.00 0.00 3.06
812 824 6.060788 GGGAGAGATTAGATGCTTTGTGATT 58.939 40.000 0.00 0.00 0.00 2.57
813 825 6.545298 GGGAGAGATTAGATGCTTTGTGATTT 59.455 38.462 0.00 0.00 0.00 2.17
814 826 7.416022 GGAGAGATTAGATGCTTTGTGATTTG 58.584 38.462 0.00 0.00 0.00 2.32
815 827 7.066766 GGAGAGATTAGATGCTTTGTGATTTGT 59.933 37.037 0.00 0.00 0.00 2.83
816 828 7.759465 AGAGATTAGATGCTTTGTGATTTGTG 58.241 34.615 0.00 0.00 0.00 3.33
818 830 8.114331 AGATTAGATGCTTTGTGATTTGTGAA 57.886 30.769 0.00 0.00 0.00 3.18
819 831 8.746530 AGATTAGATGCTTTGTGATTTGTGAAT 58.253 29.630 0.00 0.00 0.00 2.57
822 834 6.154445 AGATGCTTTGTGATTTGTGAATGAC 58.846 36.000 0.00 0.00 31.04 3.06
823 835 5.259832 TGCTTTGTGATTTGTGAATGACA 57.740 34.783 0.00 0.00 37.55 3.58
839 851 1.645034 GACACGTGTCATCCATCAGG 58.355 55.000 37.16 1.27 44.18 3.86
840 852 1.204704 GACACGTGTCATCCATCAGGA 59.795 52.381 37.16 0.00 44.18 3.86
841 853 2.991132 GACACGTGTCATCCATCAGGAC 60.991 54.545 37.16 11.22 44.18 3.85
848 860 3.708210 TCCATCAGGACGGGTCAC 58.292 61.111 0.75 0.00 39.61 3.67
850 862 1.079127 CCATCAGGACGGGTCACAC 60.079 63.158 0.75 0.00 36.89 3.82
851 863 1.079127 CATCAGGACGGGTCACACC 60.079 63.158 0.75 0.00 37.60 4.16
852 864 1.229209 ATCAGGACGGGTCACACCT 60.229 57.895 0.75 0.00 38.64 4.00
862 874 4.875544 CGGGTCACACCTGTTTTATATG 57.124 45.455 0.00 0.00 39.82 1.78
863 875 4.509616 CGGGTCACACCTGTTTTATATGA 58.490 43.478 0.00 0.00 39.82 2.15
864 876 4.570772 CGGGTCACACCTGTTTTATATGAG 59.429 45.833 0.00 0.00 39.82 2.90
867 879 5.585047 GGTCACACCTGTTTTATATGAGACC 59.415 44.000 3.89 3.89 41.61 3.85
868 880 6.407202 GTCACACCTGTTTTATATGAGACCT 58.593 40.000 0.00 0.00 0.00 3.85
869 881 6.313905 GTCACACCTGTTTTATATGAGACCTG 59.686 42.308 0.00 0.00 0.00 4.00
870 882 5.586243 CACACCTGTTTTATATGAGACCTGG 59.414 44.000 0.00 0.00 0.00 4.45
871 883 5.250774 ACACCTGTTTTATATGAGACCTGGT 59.749 40.000 0.00 0.00 0.00 4.00
872 884 5.817816 CACCTGTTTTATATGAGACCTGGTC 59.182 44.000 19.20 19.20 0.00 4.02
885 897 2.296471 GACCTGGTCTCATATACCACGG 59.704 54.545 19.53 0.00 42.10 4.94
886 898 1.000955 CCTGGTCTCATATACCACGGC 59.999 57.143 0.00 0.00 42.10 5.68
1022 1037 0.883833 CCCTTCGAAGCAAGCAACAT 59.116 50.000 19.99 0.00 0.00 2.71
1066 1081 2.161486 GCTCGTCCTGTCGTGCATC 61.161 63.158 0.00 0.00 45.42 3.91
1118 1133 4.035091 CGAGCGAGCAGAGCTATAAGATAT 59.965 45.833 0.00 0.00 46.13 1.63
1176 1191 2.480759 CCGATCCCAAAGGTACGTAGTG 60.481 54.545 0.00 0.00 45.73 2.74
1177 1192 2.480759 CGATCCCAAAGGTACGTAGTGG 60.481 54.545 0.00 10.02 45.73 4.00
1233 1251 8.175069 CGTAGCTTTCTGCAACTTGATTAATTA 58.825 33.333 0.00 0.00 45.94 1.40
1409 4498 0.884704 GTCCAGCGCAAGTTCTCCAA 60.885 55.000 11.47 0.00 41.68 3.53
1458 4550 2.270527 GAGGAGCTCAAGGTGCCC 59.729 66.667 17.19 0.00 34.28 5.36
1503 4595 2.089980 ACGCTGGAGTACGTCATAACT 58.910 47.619 0.00 0.00 38.28 2.24
1506 4598 3.179830 GCTGGAGTACGTCATAACTGTG 58.820 50.000 0.00 0.00 0.00 3.66
1512 4604 0.034337 ACGTCATAACTGTGGGCGTT 59.966 50.000 1.92 0.00 31.16 4.84
1646 4747 1.183676 AGCACGTACTCCCCGTTCTT 61.184 55.000 0.00 0.00 36.17 2.52
2532 5687 2.108157 GGACACGAGTGCACCACA 59.892 61.111 14.63 0.00 36.74 4.17
2533 5688 1.522806 GGACACGAGTGCACCACAA 60.523 57.895 14.63 0.00 36.74 3.33
2534 5689 1.641677 GACACGAGTGCACCACAAC 59.358 57.895 14.63 0.00 36.74 3.32
2535 5690 0.810031 GACACGAGTGCACCACAACT 60.810 55.000 14.63 0.00 36.74 3.16
2536 5691 0.810031 ACACGAGTGCACCACAACTC 60.810 55.000 14.63 1.96 36.74 3.01
2537 5692 1.227556 ACGAGTGCACCACAACTCC 60.228 57.895 14.63 0.00 36.74 3.85
2538 5693 1.227527 CGAGTGCACCACAACTCCA 60.228 57.895 14.63 0.00 36.74 3.86
2539 5694 1.498865 CGAGTGCACCACAACTCCAC 61.499 60.000 14.63 0.00 36.74 4.02
2540 5695 0.463654 GAGTGCACCACAACTCCACA 60.464 55.000 14.63 0.00 36.74 4.17
2562 5717 1.000771 GAAGGAAGGAAGGGTGGCC 60.001 63.158 0.00 0.00 0.00 5.36
2624 5779 1.171308 CGAGGTAAGGGACACGAAGA 58.829 55.000 0.00 0.00 33.29 2.87
2631 5786 2.747686 GGACACGAAGAGGGCCAA 59.252 61.111 6.18 0.00 33.94 4.52
2632 5787 1.072505 GGACACGAAGAGGGCCAAA 59.927 57.895 6.18 0.00 33.94 3.28
2633 5788 0.536460 GGACACGAAGAGGGCCAAAA 60.536 55.000 6.18 0.00 33.94 2.44
2634 5789 1.314730 GACACGAAGAGGGCCAAAAA 58.685 50.000 6.18 0.00 0.00 1.94
2732 5898 7.326789 CGCATGTGTAATCTTTCAAATCAAACT 59.673 33.333 0.00 0.00 0.00 2.66
2844 6023 3.684103 TGCCGCTTTAATGGAATTACG 57.316 42.857 0.00 0.00 38.79 3.18
2864 6043 5.116069 ACGCCGTTTAAGACATTTTCATT 57.884 34.783 0.00 0.00 0.00 2.57
2874 6053 8.655651 TTAAGACATTTTCATTTGTTTCACCC 57.344 30.769 0.00 0.00 0.00 4.61
2875 6054 5.610398 AGACATTTTCATTTGTTTCACCCC 58.390 37.500 0.00 0.00 0.00 4.95
2876 6055 5.130145 AGACATTTTCATTTGTTTCACCCCA 59.870 36.000 0.00 0.00 0.00 4.96
2881 6060 8.844244 CATTTTCATTTGTTTCACCCCATTTAA 58.156 29.630 0.00 0.00 0.00 1.52
2940 6831 6.762702 AGCACATTATGTCAAATCATCACA 57.237 33.333 0.00 0.00 0.00 3.58
3053 6944 3.552684 CGGCTCCAAACATCAACAATTGT 60.553 43.478 4.92 4.92 0.00 2.71
3062 6953 3.507233 ACATCAACAATTGTAGTGGCCAG 59.493 43.478 12.39 0.00 0.00 4.85
3065 6956 4.406456 TCAACAATTGTAGTGGCCAGAAT 58.594 39.130 12.39 0.00 0.00 2.40
3068 6959 6.150976 TCAACAATTGTAGTGGCCAGAATAAG 59.849 38.462 12.39 2.09 0.00 1.73
3082 6973 3.760684 CAGAATAAGGCCTTGCATATCCC 59.239 47.826 28.77 8.87 0.00 3.85
3084 6975 1.528600 TAAGGCCTTGCATATCCCCA 58.471 50.000 28.77 0.00 0.00 4.96
3085 6976 0.186873 AAGGCCTTGCATATCCCCAG 59.813 55.000 19.73 0.00 0.00 4.45
3086 6977 0.698886 AGGCCTTGCATATCCCCAGA 60.699 55.000 0.00 0.00 0.00 3.86
3089 6980 1.613836 CCTTGCATATCCCCAGAAGC 58.386 55.000 0.00 0.00 0.00 3.86
3137 7038 1.399089 CGGACACGTTCAAACCTGTTT 59.601 47.619 0.00 0.00 30.18 2.83
3141 7042 2.184448 CACGTTCAAACCTGTTTGCAG 58.816 47.619 16.06 12.02 46.92 4.41
3159 7060 4.421479 ACAGGAGCCGAACGAGCG 62.421 66.667 0.00 0.00 34.64 5.03
3195 7096 1.794222 CAACGTCGGGCTCCATTTC 59.206 57.895 0.00 0.00 0.00 2.17
3213 7114 4.363991 TTTCCAAAACCCCAAATCCATG 57.636 40.909 0.00 0.00 0.00 3.66
3247 7148 4.331168 GCATAGACCCTTCGATCAATATGC 59.669 45.833 10.21 10.21 37.98 3.14
3264 7165 6.420306 TCAATATGCACACAACAATTCAACAC 59.580 34.615 0.00 0.00 0.00 3.32
3351 7252 1.739067 GACTTTCCCGAGGTCATTGG 58.261 55.000 0.00 0.00 0.00 3.16
3435 7336 0.538977 TCCTCGACTCCTCGGTGTTT 60.539 55.000 0.00 0.00 40.58 2.83
3479 7380 5.672421 TCTCTCAATCTCAAATGCTCTCA 57.328 39.130 0.00 0.00 0.00 3.27
3480 7381 5.417811 TCTCTCAATCTCAAATGCTCTCAC 58.582 41.667 0.00 0.00 0.00 3.51
3490 7391 4.081697 TCAAATGCTCTCACATACCTTCGA 60.082 41.667 0.00 0.00 0.00 3.71
3491 7392 2.941453 TGCTCTCACATACCTTCGAC 57.059 50.000 0.00 0.00 0.00 4.20
3517 7418 2.753452 CAAGCTCCATTTGCTCTCATGT 59.247 45.455 0.00 0.00 40.22 3.21
3530 7431 3.733684 GCTCTCATGTCTTCGTCTTCTCC 60.734 52.174 0.00 0.00 0.00 3.71
3547 7448 5.671735 TCTTCTCCATATTCATCCTTTCCCA 59.328 40.000 0.00 0.00 0.00 4.37
3557 7458 4.996793 TCATCCTTTCCCACTCAATTTGA 58.003 39.130 0.00 0.00 0.00 2.69
3559 7460 5.243730 TCATCCTTTCCCACTCAATTTGAAC 59.756 40.000 0.01 0.00 0.00 3.18
3561 7462 3.897505 CCTTTCCCACTCAATTTGAACCT 59.102 43.478 0.01 0.00 0.00 3.50
3562 7463 5.076873 CCTTTCCCACTCAATTTGAACCTA 58.923 41.667 0.01 0.00 0.00 3.08
3563 7464 5.716703 CCTTTCCCACTCAATTTGAACCTAT 59.283 40.000 0.01 0.00 0.00 2.57
3564 7465 6.127619 CCTTTCCCACTCAATTTGAACCTATC 60.128 42.308 0.01 0.00 0.00 2.08
3572 7473 2.483014 TTTGAACCTATCCCACACCG 57.517 50.000 0.00 0.00 0.00 4.94
3573 7474 0.616371 TTGAACCTATCCCACACCGG 59.384 55.000 0.00 0.00 0.00 5.28
3705 7607 0.676466 GGCGTGGATGTGGATGTTCA 60.676 55.000 0.00 0.00 0.00 3.18
3714 7616 4.081198 GGATGTGGATGTTCAGAGAGAAGT 60.081 45.833 0.00 0.00 36.78 3.01
3715 7617 4.963318 TGTGGATGTTCAGAGAGAAGTT 57.037 40.909 0.00 0.00 36.78 2.66
3716 7618 4.635223 TGTGGATGTTCAGAGAGAAGTTG 58.365 43.478 0.00 0.00 36.78 3.16
3717 7619 4.101585 TGTGGATGTTCAGAGAGAAGTTGT 59.898 41.667 0.00 0.00 36.78 3.32
3718 7620 5.059833 GTGGATGTTCAGAGAGAAGTTGTT 58.940 41.667 0.00 0.00 36.78 2.83
3719 7621 5.049818 GTGGATGTTCAGAGAGAAGTTGTTG 60.050 44.000 0.00 0.00 36.78 3.33
3720 7622 5.059833 GGATGTTCAGAGAGAAGTTGTTGT 58.940 41.667 0.00 0.00 36.78 3.32
3721 7623 5.529060 GGATGTTCAGAGAGAAGTTGTTGTT 59.471 40.000 0.00 0.00 36.78 2.83
3722 7624 5.801350 TGTTCAGAGAGAAGTTGTTGTTG 57.199 39.130 0.00 0.00 36.78 3.33
3723 7625 4.635765 TGTTCAGAGAGAAGTTGTTGTTGG 59.364 41.667 0.00 0.00 36.78 3.77
3724 7626 3.808728 TCAGAGAGAAGTTGTTGTTGGG 58.191 45.455 0.00 0.00 0.00 4.12
3725 7627 2.880890 CAGAGAGAAGTTGTTGTTGGGG 59.119 50.000 0.00 0.00 0.00 4.96
3726 7628 2.777692 AGAGAGAAGTTGTTGTTGGGGA 59.222 45.455 0.00 0.00 0.00 4.81
3727 7629 3.202151 AGAGAGAAGTTGTTGTTGGGGAA 59.798 43.478 0.00 0.00 0.00 3.97
3728 7630 3.288092 AGAGAAGTTGTTGTTGGGGAAC 58.712 45.455 0.00 0.00 0.00 3.62
3729 7631 2.021457 AGAAGTTGTTGTTGGGGAACG 58.979 47.619 0.00 0.00 0.00 3.95
3730 7632 1.746787 GAAGTTGTTGTTGGGGAACGT 59.253 47.619 0.00 0.00 0.00 3.99
3731 7633 2.713863 AGTTGTTGTTGGGGAACGTA 57.286 45.000 0.00 0.00 0.00 3.57
3732 7634 2.567985 AGTTGTTGTTGGGGAACGTAG 58.432 47.619 0.00 0.00 0.00 3.51
3733 7635 1.002142 GTTGTTGTTGGGGAACGTAGC 60.002 52.381 0.00 0.00 0.00 3.58
3734 7636 0.180642 TGTTGTTGGGGAACGTAGCA 59.819 50.000 0.00 0.00 0.00 3.49
3735 7637 0.872388 GTTGTTGGGGAACGTAGCAG 59.128 55.000 0.00 0.00 0.00 4.24
3736 7638 0.759959 TTGTTGGGGAACGTAGCAGA 59.240 50.000 0.00 0.00 0.00 4.26
3737 7639 0.759959 TGTTGGGGAACGTAGCAGAA 59.240 50.000 0.00 0.00 0.00 3.02
3738 7640 1.141254 TGTTGGGGAACGTAGCAGAAA 59.859 47.619 0.00 0.00 0.00 2.52
3739 7641 2.224670 TGTTGGGGAACGTAGCAGAAAT 60.225 45.455 0.00 0.00 0.00 2.17
3740 7642 2.817844 GTTGGGGAACGTAGCAGAAATT 59.182 45.455 0.00 0.00 0.00 1.82
3741 7643 2.706890 TGGGGAACGTAGCAGAAATTC 58.293 47.619 0.00 0.00 0.00 2.17
3742 7644 2.039216 TGGGGAACGTAGCAGAAATTCA 59.961 45.455 0.00 0.00 0.00 2.57
3743 7645 3.078837 GGGGAACGTAGCAGAAATTCAA 58.921 45.455 0.00 0.00 0.00 2.69
3744 7646 3.504520 GGGGAACGTAGCAGAAATTCAAA 59.495 43.478 0.00 0.00 0.00 2.69
3745 7647 4.022676 GGGGAACGTAGCAGAAATTCAAAA 60.023 41.667 0.00 0.00 0.00 2.44
3746 7648 5.336451 GGGGAACGTAGCAGAAATTCAAAAT 60.336 40.000 0.00 0.00 0.00 1.82
3747 7649 6.156519 GGGAACGTAGCAGAAATTCAAAATT 58.843 36.000 0.00 0.00 0.00 1.82
3748 7650 6.645003 GGGAACGTAGCAGAAATTCAAAATTT 59.355 34.615 0.00 0.00 0.00 1.82
3749 7651 7.170828 GGGAACGTAGCAGAAATTCAAAATTTT 59.829 33.333 0.00 0.00 0.00 1.82
3750 7652 8.547894 GGAACGTAGCAGAAATTCAAAATTTTT 58.452 29.630 0.00 0.00 0.00 1.94
3751 7653 9.567917 GAACGTAGCAGAAATTCAAAATTTTTC 57.432 29.630 0.00 0.00 0.00 2.29
3752 7654 8.871686 ACGTAGCAGAAATTCAAAATTTTTCT 57.128 26.923 0.00 0.00 39.61 2.52
3753 7655 9.959749 ACGTAGCAGAAATTCAAAATTTTTCTA 57.040 25.926 0.00 0.00 37.55 2.10
3756 7658 8.871686 AGCAGAAATTCAAAATTTTTCTACGT 57.128 26.923 0.00 0.00 37.55 3.57
3757 7659 8.755018 AGCAGAAATTCAAAATTTTTCTACGTG 58.245 29.630 0.00 0.00 37.55 4.49
3758 7660 8.539674 GCAGAAATTCAAAATTTTTCTACGTGT 58.460 29.630 0.00 0.00 37.55 4.49
3760 7662 9.796120 AGAAATTCAAAATTTTTCTACGTGTCA 57.204 25.926 0.00 0.00 37.80 3.58
3761 7663 9.829637 GAAATTCAAAATTTTTCTACGTGTCAC 57.170 29.630 0.00 0.00 0.00 3.67
3762 7664 7.924103 ATTCAAAATTTTTCTACGTGTCACC 57.076 32.000 0.00 0.00 0.00 4.02
3763 7665 6.438259 TCAAAATTTTTCTACGTGTCACCA 57.562 33.333 0.00 0.00 0.00 4.17
3764 7666 6.853720 TCAAAATTTTTCTACGTGTCACCAA 58.146 32.000 0.00 0.00 0.00 3.67
3765 7667 6.970043 TCAAAATTTTTCTACGTGTCACCAAG 59.030 34.615 0.00 0.00 0.00 3.61
3766 7668 6.687081 AAATTTTTCTACGTGTCACCAAGA 57.313 33.333 0.00 0.00 0.00 3.02
3767 7669 6.877611 AATTTTTCTACGTGTCACCAAGAT 57.122 33.333 0.00 0.00 0.00 2.40
3768 7670 5.917541 TTTTTCTACGTGTCACCAAGATC 57.082 39.130 0.00 0.00 0.00 2.75
3769 7671 4.866508 TTTCTACGTGTCACCAAGATCT 57.133 40.909 0.00 0.00 0.00 2.75
3770 7672 5.970317 TTTCTACGTGTCACCAAGATCTA 57.030 39.130 0.00 0.00 0.00 1.98
3771 7673 6.525578 TTTCTACGTGTCACCAAGATCTAT 57.474 37.500 0.00 0.00 0.00 1.98
3772 7674 5.752892 TCTACGTGTCACCAAGATCTATC 57.247 43.478 0.00 0.00 0.00 2.08
3773 7675 5.437946 TCTACGTGTCACCAAGATCTATCT 58.562 41.667 0.00 0.00 39.22 1.98
3774 7676 6.589135 TCTACGTGTCACCAAGATCTATCTA 58.411 40.000 0.00 0.00 35.76 1.98
3775 7677 7.225011 TCTACGTGTCACCAAGATCTATCTAT 58.775 38.462 0.00 0.00 35.76 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.579761 AGCTTCCATTTAAAAGAGATCATCC 57.420 36.000 0.00 0.00 0.00 3.51
1 2 8.680903 TGAAGCTTCCATTTAAAAGAGATCATC 58.319 33.333 23.42 0.00 0.00 2.92
2 3 8.585471 TGAAGCTTCCATTTAAAAGAGATCAT 57.415 30.769 23.42 0.00 0.00 2.45
5 6 9.649167 CATTTGAAGCTTCCATTTAAAAGAGAT 57.351 29.630 23.42 0.00 0.00 2.75
6 7 8.090214 CCATTTGAAGCTTCCATTTAAAAGAGA 58.910 33.333 23.42 0.00 0.00 3.10
7 8 7.332678 CCCATTTGAAGCTTCCATTTAAAAGAG 59.667 37.037 23.42 11.76 0.00 2.85
8 9 7.160726 CCCATTTGAAGCTTCCATTTAAAAGA 58.839 34.615 23.42 0.00 0.00 2.52
11 12 5.280419 CCCCCATTTGAAGCTTCCATTTAAA 60.280 40.000 23.42 16.16 0.00 1.52
12 13 4.224818 CCCCCATTTGAAGCTTCCATTTAA 59.775 41.667 23.42 7.99 0.00 1.52
13 14 3.774216 CCCCCATTTGAAGCTTCCATTTA 59.226 43.478 23.42 1.32 0.00 1.40
14 15 2.573009 CCCCCATTTGAAGCTTCCATTT 59.427 45.455 23.42 3.39 0.00 2.32
15 16 2.190538 CCCCCATTTGAAGCTTCCATT 58.809 47.619 23.42 6.56 0.00 3.16
16 17 1.870064 CCCCCATTTGAAGCTTCCAT 58.130 50.000 23.42 12.64 0.00 3.41
19 20 1.269958 AAGCCCCCATTTGAAGCTTC 58.730 50.000 19.89 19.89 39.50 3.86
20 21 1.269958 GAAGCCCCCATTTGAAGCTT 58.730 50.000 0.00 0.00 45.97 3.74
21 22 0.114954 TGAAGCCCCCATTTGAAGCT 59.885 50.000 0.00 0.00 34.64 3.74
22 23 1.137675 GATGAAGCCCCCATTTGAAGC 59.862 52.381 0.00 0.00 0.00 3.86
23 24 1.406539 CGATGAAGCCCCCATTTGAAG 59.593 52.381 0.00 0.00 0.00 3.02
25 26 0.331278 ACGATGAAGCCCCCATTTGA 59.669 50.000 0.00 0.00 0.00 2.69
26 27 1.185315 AACGATGAAGCCCCCATTTG 58.815 50.000 0.00 0.00 0.00 2.32
27 28 1.824852 GAAACGATGAAGCCCCCATTT 59.175 47.619 0.00 0.00 0.00 2.32
28 29 1.474330 GAAACGATGAAGCCCCCATT 58.526 50.000 0.00 0.00 0.00 3.16
29 30 0.395724 GGAAACGATGAAGCCCCCAT 60.396 55.000 0.00 0.00 0.00 4.00
30 31 1.001393 GGAAACGATGAAGCCCCCA 60.001 57.895 0.00 0.00 0.00 4.96
31 32 1.753078 GGGAAACGATGAAGCCCCC 60.753 63.158 0.00 0.00 32.50 5.40
32 33 3.920031 GGGAAACGATGAAGCCCC 58.080 61.111 0.00 0.00 32.50 5.80
44 45 2.637872 AGAAGATTGAGGTCACGGGAAA 59.362 45.455 0.00 0.00 0.00 3.13
45 46 2.257207 AGAAGATTGAGGTCACGGGAA 58.743 47.619 0.00 0.00 0.00 3.97
46 47 1.938585 AGAAGATTGAGGTCACGGGA 58.061 50.000 0.00 0.00 0.00 5.14
47 48 5.730296 ATATAGAAGATTGAGGTCACGGG 57.270 43.478 0.00 0.00 0.00 5.28
48 49 7.810282 CACTTATATAGAAGATTGAGGTCACGG 59.190 40.741 13.92 0.00 0.00 4.94
50 51 8.364142 AGCACTTATATAGAAGATTGAGGTCAC 58.636 37.037 13.92 0.00 0.00 3.67
51 52 8.484214 AGCACTTATATAGAAGATTGAGGTCA 57.516 34.615 13.92 0.00 0.00 4.02
52 53 9.202273 CAAGCACTTATATAGAAGATTGAGGTC 57.798 37.037 13.92 0.00 33.73 3.85
53 54 7.659390 GCAAGCACTTATATAGAAGATTGAGGT 59.341 37.037 13.92 1.78 33.73 3.85
55 56 7.383572 ACGCAAGCACTTATATAGAAGATTGAG 59.616 37.037 13.92 16.11 45.62 3.02
56 57 7.210174 ACGCAAGCACTTATATAGAAGATTGA 58.790 34.615 13.92 0.00 45.62 2.57
59 60 6.987386 AGACGCAAGCACTTATATAGAAGAT 58.013 36.000 13.92 0.00 45.62 2.40
60 61 6.392625 AGACGCAAGCACTTATATAGAAGA 57.607 37.500 13.92 0.00 45.62 2.87
62 63 7.595130 CACATAGACGCAAGCACTTATATAGAA 59.405 37.037 0.00 0.00 45.62 2.10
63 64 7.084486 CACATAGACGCAAGCACTTATATAGA 58.916 38.462 0.00 0.00 45.62 1.98
64 65 6.183360 GCACATAGACGCAAGCACTTATATAG 60.183 42.308 0.00 0.00 45.62 1.31
65 66 5.633601 GCACATAGACGCAAGCACTTATATA 59.366 40.000 0.00 0.00 45.62 0.86
66 67 4.449068 GCACATAGACGCAAGCACTTATAT 59.551 41.667 0.00 0.00 45.62 0.86
68 69 2.609459 GCACATAGACGCAAGCACTTAT 59.391 45.455 0.00 0.00 45.62 1.73
69 70 1.999735 GCACATAGACGCAAGCACTTA 59.000 47.619 0.00 0.00 45.62 2.24
70 71 0.798776 GCACATAGACGCAAGCACTT 59.201 50.000 0.00 0.00 45.62 3.16
71 72 0.320683 TGCACATAGACGCAAGCACT 60.321 50.000 0.00 0.00 45.62 4.40
72 73 0.729116 ATGCACATAGACGCAAGCAC 59.271 50.000 0.00 0.00 42.37 4.40
74 75 0.729116 ACATGCACATAGACGCAAGC 59.271 50.000 0.00 0.00 42.37 4.01
77 78 2.089017 GCACATGCACATAGACGCA 58.911 52.632 0.00 0.00 43.45 5.24
78 79 4.983090 GCACATGCACATAGACGC 57.017 55.556 0.00 0.00 41.59 5.19
88 89 2.028748 AGGGTTCTTTCAATGCACATGC 60.029 45.455 0.00 0.00 42.50 4.06
89 90 3.581755 CAGGGTTCTTTCAATGCACATG 58.418 45.455 0.00 0.00 0.00 3.21
90 91 2.028748 GCAGGGTTCTTTCAATGCACAT 60.029 45.455 0.00 0.00 33.92 3.21
91 92 1.340889 GCAGGGTTCTTTCAATGCACA 59.659 47.619 0.00 0.00 33.92 4.57
92 93 1.340889 TGCAGGGTTCTTTCAATGCAC 59.659 47.619 0.00 0.00 38.64 4.57
93 94 1.702182 TGCAGGGTTCTTTCAATGCA 58.298 45.000 0.00 0.00 41.05 3.96
95 96 4.524316 TTCATGCAGGGTTCTTTCAATG 57.476 40.909 0.00 0.00 0.00 2.82
96 97 5.750352 ATTTCATGCAGGGTTCTTTCAAT 57.250 34.783 0.00 0.00 0.00 2.57
98 99 4.262549 CCAATTTCATGCAGGGTTCTTTCA 60.263 41.667 0.00 0.00 0.00 2.69
99 100 4.248058 CCAATTTCATGCAGGGTTCTTTC 58.752 43.478 0.00 0.00 0.00 2.62
100 101 3.008266 CCCAATTTCATGCAGGGTTCTTT 59.992 43.478 0.00 0.00 34.75 2.52
102 103 2.181975 CCCAATTTCATGCAGGGTTCT 58.818 47.619 0.00 0.00 34.75 3.01
103 104 1.207811 CCCCAATTTCATGCAGGGTTC 59.792 52.381 0.00 0.00 37.84 3.62
104 105 1.203288 TCCCCAATTTCATGCAGGGTT 60.203 47.619 0.00 0.00 37.84 4.11
106 107 1.797320 ATCCCCAATTTCATGCAGGG 58.203 50.000 0.00 0.00 39.29 4.45
107 108 5.356291 TTTAATCCCCAATTTCATGCAGG 57.644 39.130 0.00 0.00 0.00 4.85
109 110 5.927819 GGATTTAATCCCCAATTTCATGCA 58.072 37.500 12.74 0.00 43.88 3.96
121 122 7.882791 ACAAAAAGGTTTGATGGATTTAATCCC 59.117 33.333 20.01 7.32 46.22 3.85
122 123 8.846943 ACAAAAAGGTTTGATGGATTTAATCC 57.153 30.769 16.54 16.54 45.99 3.01
126 127 9.974980 GAAGTACAAAAAGGTTTGATGGATTTA 57.025 29.630 6.21 0.00 45.99 1.40
128 129 8.250143 AGAAGTACAAAAAGGTTTGATGGATT 57.750 30.769 6.21 0.00 45.99 3.01
129 130 7.039714 GGAGAAGTACAAAAAGGTTTGATGGAT 60.040 37.037 6.21 0.00 45.99 3.41
130 131 6.264518 GGAGAAGTACAAAAAGGTTTGATGGA 59.735 38.462 6.21 0.00 45.99 3.41
132 133 7.277174 AGGAGAAGTACAAAAAGGTTTGATG 57.723 36.000 6.21 0.00 45.99 3.07
133 134 7.898014 AAGGAGAAGTACAAAAAGGTTTGAT 57.102 32.000 6.21 0.00 45.99 2.57
134 135 8.810990 TTAAGGAGAAGTACAAAAAGGTTTGA 57.189 30.769 6.21 0.00 45.99 2.69
137 138 8.857098 GGAATTAAGGAGAAGTACAAAAAGGTT 58.143 33.333 0.00 0.00 0.00 3.50
138 139 7.450634 GGGAATTAAGGAGAAGTACAAAAAGGT 59.549 37.037 0.00 0.00 0.00 3.50
139 140 7.450323 TGGGAATTAAGGAGAAGTACAAAAAGG 59.550 37.037 0.00 0.00 0.00 3.11
141 142 8.770010 TTGGGAATTAAGGAGAAGTACAAAAA 57.230 30.769 0.00 0.00 0.00 1.94
142 143 8.770010 TTTGGGAATTAAGGAGAAGTACAAAA 57.230 30.769 0.00 0.00 0.00 2.44
144 145 8.770010 TTTTTGGGAATTAAGGAGAAGTACAA 57.230 30.769 0.00 0.00 0.00 2.41
148 149 9.768215 TCATATTTTTGGGAATTAAGGAGAAGT 57.232 29.630 0.00 0.00 0.00 3.01
172 173 9.784531 GGAAAGATGAGTGGAAATATTAGATCA 57.215 33.333 0.00 0.00 0.00 2.92
176 177 9.495572 GGTAGGAAAGATGAGTGGAAATATTAG 57.504 37.037 0.00 0.00 0.00 1.73
177 178 8.998814 TGGTAGGAAAGATGAGTGGAAATATTA 58.001 33.333 0.00 0.00 0.00 0.98
178 179 7.775561 GTGGTAGGAAAGATGAGTGGAAATATT 59.224 37.037 0.00 0.00 0.00 1.28
179 180 7.092444 TGTGGTAGGAAAGATGAGTGGAAATAT 60.092 37.037 0.00 0.00 0.00 1.28
180 181 6.214615 TGTGGTAGGAAAGATGAGTGGAAATA 59.785 38.462 0.00 0.00 0.00 1.40
181 182 5.014123 TGTGGTAGGAAAGATGAGTGGAAAT 59.986 40.000 0.00 0.00 0.00 2.17
182 183 4.349636 TGTGGTAGGAAAGATGAGTGGAAA 59.650 41.667 0.00 0.00 0.00 3.13
186 187 4.021104 TCTGTGTGGTAGGAAAGATGAGTG 60.021 45.833 0.00 0.00 0.00 3.51
225 226 8.908786 TCTTGAGGTTATAAGAATGCTTATGG 57.091 34.615 15.33 0.00 44.79 2.74
403 411 3.771577 GGAAGTCCCTTTCAGTGAGAA 57.228 47.619 0.00 0.00 0.00 2.87
479 491 6.201591 AGACCTGGTCTCATAGAATTCTTCT 58.798 40.000 23.49 2.73 38.71 2.85
480 492 6.478512 AGACCTGGTCTCATAGAATTCTTC 57.521 41.667 23.49 0.23 38.71 2.87
494 506 0.531200 CTAACCCGTGAGACCTGGTC 59.469 60.000 19.20 19.20 0.00 4.02
495 507 0.178941 ACTAACCCGTGAGACCTGGT 60.179 55.000 0.00 0.00 0.00 4.00
497 509 2.719739 TCTACTAACCCGTGAGACCTG 58.280 52.381 0.00 0.00 0.00 4.00
498 510 3.053842 TCATCTACTAACCCGTGAGACCT 60.054 47.826 0.00 0.00 0.00 3.85
499 511 3.285484 TCATCTACTAACCCGTGAGACC 58.715 50.000 0.00 0.00 0.00 3.85
500 512 4.197750 TCTCATCTACTAACCCGTGAGAC 58.802 47.826 0.00 0.00 37.69 3.36
503 515 3.285484 GGTCTCATCTACTAACCCGTGA 58.715 50.000 0.00 0.00 0.00 4.35
505 517 2.664015 GGGTCTCATCTACTAACCCGT 58.336 52.381 0.00 0.00 40.19 5.28
507 519 4.875561 GATGGGTCTCATCTACTAACCC 57.124 50.000 5.37 1.85 46.59 4.11
527 539 3.548745 GTCACATGACATCCATCAGGA 57.451 47.619 7.15 0.00 44.18 3.86
545 557 5.200368 ACCCTTTGTGATTTGTGAATGTC 57.800 39.130 0.00 0.00 0.00 3.06
547 559 6.289745 CAAACCCTTTGTGATTTGTGAATG 57.710 37.500 0.00 0.00 35.94 2.67
560 572 4.202367 ACTGAGACCTAGACAAACCCTTTG 60.202 45.833 0.00 0.00 45.95 2.77
563 575 3.166679 GACTGAGACCTAGACAAACCCT 58.833 50.000 0.00 0.00 0.00 4.34
564 576 2.094649 CGACTGAGACCTAGACAAACCC 60.095 54.545 0.00 0.00 0.00 4.11
565 577 2.818432 TCGACTGAGACCTAGACAAACC 59.182 50.000 0.00 0.00 0.00 3.27
566 578 3.502979 AGTCGACTGAGACCTAGACAAAC 59.497 47.826 19.30 0.00 41.83 2.93
567 579 3.502595 CAGTCGACTGAGACCTAGACAAA 59.497 47.826 36.73 0.00 46.59 2.83
568 580 3.075148 CAGTCGACTGAGACCTAGACAA 58.925 50.000 36.73 0.00 46.59 3.18
569 581 2.701107 CAGTCGACTGAGACCTAGACA 58.299 52.381 36.73 0.00 46.59 3.41
580 592 0.791238 CGCGAAGTCTCAGTCGACTG 60.791 60.000 34.76 34.76 43.14 3.51
582 594 0.110328 TTCGCGAAGTCTCAGTCGAC 60.110 55.000 19.38 7.70 39.64 4.20
583 595 0.166161 CTTCGCGAAGTCTCAGTCGA 59.834 55.000 34.97 4.60 39.64 4.20
584 596 2.631303 CTTCGCGAAGTCTCAGTCG 58.369 57.895 34.97 12.16 40.24 4.18
593 605 1.982223 CTTGACTGAGACTTCGCGAAG 59.018 52.381 39.55 39.55 43.79 3.79
595 607 0.387367 GCTTGACTGAGACTTCGCGA 60.387 55.000 3.71 3.71 0.00 5.87
596 608 0.664466 TGCTTGACTGAGACTTCGCG 60.664 55.000 0.00 0.00 0.00 5.87
597 609 1.502231 TTGCTTGACTGAGACTTCGC 58.498 50.000 0.00 0.00 0.00 4.70
598 610 3.062763 ACATTGCTTGACTGAGACTTCG 58.937 45.455 0.00 0.00 0.00 3.79
599 611 5.233988 ACTACATTGCTTGACTGAGACTTC 58.766 41.667 0.00 0.00 0.00 3.01
600 612 5.220710 ACTACATTGCTTGACTGAGACTT 57.779 39.130 0.00 0.00 0.00 3.01
602 614 5.006165 GCATACTACATTGCTTGACTGAGAC 59.994 44.000 0.00 0.00 35.95 3.36
603 615 5.111989 GCATACTACATTGCTTGACTGAGA 58.888 41.667 0.00 0.00 35.95 3.27
606 618 5.352293 TCTTGCATACTACATTGCTTGACTG 59.648 40.000 0.00 0.00 39.60 3.51
607 619 5.491070 TCTTGCATACTACATTGCTTGACT 58.509 37.500 0.00 0.00 39.60 3.41
608 620 5.801350 TCTTGCATACTACATTGCTTGAC 57.199 39.130 0.00 0.00 39.60 3.18
609 621 6.172630 TCTTCTTGCATACTACATTGCTTGA 58.827 36.000 0.00 0.00 39.60 3.02
610 622 6.426980 TCTTCTTGCATACTACATTGCTTG 57.573 37.500 0.00 0.00 39.60 4.01
612 624 7.391554 TCTTTTCTTCTTGCATACTACATTGCT 59.608 33.333 0.00 0.00 39.60 3.91
614 626 9.897744 TTTCTTTTCTTCTTGCATACTACATTG 57.102 29.630 0.00 0.00 0.00 2.82
616 628 9.899226 GTTTTCTTTTCTTCTTGCATACTACAT 57.101 29.630 0.00 0.00 0.00 2.29
617 629 9.120538 AGTTTTCTTTTCTTCTTGCATACTACA 57.879 29.630 0.00 0.00 0.00 2.74
618 630 9.387123 CAGTTTTCTTTTCTTCTTGCATACTAC 57.613 33.333 0.00 0.00 0.00 2.73
619 631 9.337396 TCAGTTTTCTTTTCTTCTTGCATACTA 57.663 29.630 0.00 0.00 0.00 1.82
620 632 8.225603 TCAGTTTTCTTTTCTTCTTGCATACT 57.774 30.769 0.00 0.00 0.00 2.12
621 633 8.856490 TTCAGTTTTCTTTTCTTCTTGCATAC 57.144 30.769 0.00 0.00 0.00 2.39
622 634 9.868277 TTTTCAGTTTTCTTTTCTTCTTGCATA 57.132 25.926 0.00 0.00 0.00 3.14
624 636 8.600449 TTTTTCAGTTTTCTTTTCTTCTTGCA 57.400 26.923 0.00 0.00 0.00 4.08
648 660 7.432838 GCATTGAGATTTGTGCAAACAATTTTT 59.567 29.630 0.00 0.00 37.52 1.94
649 661 6.913673 GCATTGAGATTTGTGCAAACAATTTT 59.086 30.769 0.00 0.00 37.52 1.82
650 662 6.038382 TGCATTGAGATTTGTGCAAACAATTT 59.962 30.769 0.00 0.00 43.83 1.82
652 664 5.057819 TGCATTGAGATTTGTGCAAACAAT 58.942 33.333 0.00 3.49 43.83 2.71
654 666 4.056092 TGCATTGAGATTTGTGCAAACA 57.944 36.364 0.00 0.00 43.83 2.83
659 671 4.740268 TGATCTTGCATTGAGATTTGTGC 58.260 39.130 1.03 0.00 34.13 4.57
660 672 6.153756 TGTTGATCTTGCATTGAGATTTGTG 58.846 36.000 1.03 0.00 34.13 3.33
661 673 6.208007 TCTGTTGATCTTGCATTGAGATTTGT 59.792 34.615 1.03 0.00 34.13 2.83
663 675 6.829229 TCTGTTGATCTTGCATTGAGATTT 57.171 33.333 1.03 0.00 34.13 2.17
666 678 5.708697 ACAATCTGTTGATCTTGCATTGAGA 59.291 36.000 10.16 0.00 38.71 3.27
667 679 5.950883 ACAATCTGTTGATCTTGCATTGAG 58.049 37.500 10.16 0.00 38.71 3.02
669 681 6.849502 ACTACAATCTGTTGATCTTGCATTG 58.150 36.000 0.00 0.00 38.71 2.82
670 682 8.743085 ATACTACAATCTGTTGATCTTGCATT 57.257 30.769 0.00 0.00 38.71 3.56
671 683 7.170489 CGATACTACAATCTGTTGATCTTGCAT 59.830 37.037 0.00 0.00 38.71 3.96
673 685 6.697455 TCGATACTACAATCTGTTGATCTTGC 59.303 38.462 0.00 0.00 38.71 4.01
674 686 7.918033 AGTCGATACTACAATCTGTTGATCTTG 59.082 37.037 0.00 0.00 38.71 3.02
675 687 7.918033 CAGTCGATACTACAATCTGTTGATCTT 59.082 37.037 0.00 0.00 34.62 2.40
676 688 7.283354 TCAGTCGATACTACAATCTGTTGATCT 59.717 37.037 0.00 0.00 34.62 2.75
677 689 7.418408 TCAGTCGATACTACAATCTGTTGATC 58.582 38.462 0.00 0.00 34.62 2.92
678 690 7.283354 TCTCAGTCGATACTACAATCTGTTGAT 59.717 37.037 0.00 0.00 34.62 2.57
679 691 6.598064 TCTCAGTCGATACTACAATCTGTTGA 59.402 38.462 0.00 0.00 34.62 3.18
680 692 6.689241 GTCTCAGTCGATACTACAATCTGTTG 59.311 42.308 0.00 0.00 36.13 3.33
682 694 6.116806 AGTCTCAGTCGATACTACAATCTGT 58.883 40.000 0.00 0.00 33.48 3.41
683 695 6.612247 AGTCTCAGTCGATACTACAATCTG 57.388 41.667 0.00 0.00 33.48 2.90
684 696 6.018588 CGAAGTCTCAGTCGATACTACAATCT 60.019 42.308 0.00 0.00 39.64 2.40
685 697 6.130723 CGAAGTCTCAGTCGATACTACAATC 58.869 44.000 0.00 0.00 39.64 2.67
686 698 5.504337 GCGAAGTCTCAGTCGATACTACAAT 60.504 44.000 0.00 0.00 39.64 2.71
687 699 4.201792 GCGAAGTCTCAGTCGATACTACAA 60.202 45.833 0.00 0.00 39.64 2.41
688 700 3.309138 GCGAAGTCTCAGTCGATACTACA 59.691 47.826 0.00 0.00 39.64 2.74
689 701 3.602038 CGCGAAGTCTCAGTCGATACTAC 60.602 52.174 0.00 0.00 39.64 2.73
690 702 2.538861 CGCGAAGTCTCAGTCGATACTA 59.461 50.000 0.00 0.00 39.64 1.82
693 705 1.648504 TCGCGAAGTCTCAGTCGATA 58.351 50.000 6.20 0.00 39.64 2.92
694 706 0.803117 TTCGCGAAGTCTCAGTCGAT 59.197 50.000 19.38 0.00 39.64 3.59
695 707 0.166161 CTTCGCGAAGTCTCAGTCGA 59.834 55.000 34.97 4.60 39.64 4.20
696 708 2.631303 CTTCGCGAAGTCTCAGTCG 58.369 57.895 34.97 12.16 40.24 4.18
705 717 0.166161 TCGACTGAGACTTCGCGAAG 59.834 55.000 39.55 39.55 43.79 3.79
706 718 0.110328 GTCGACTGAGACTTCGCGAA 60.110 55.000 22.01 22.01 38.09 4.70
716 728 9.871923 GCCTTTGCTAAAAATCAGTCGACTGAG 62.872 44.444 41.33 30.58 44.44 3.35
717 729 8.211869 GCCTTTGCTAAAAATCAGTCGACTGA 62.212 42.308 41.46 41.46 44.90 3.41
718 730 5.385617 CCTTTGCTAAAAATCAGTCGACTG 58.614 41.667 34.76 34.76 45.08 3.51
719 731 4.083271 GCCTTTGCTAAAAATCAGTCGACT 60.083 41.667 13.58 13.58 33.53 4.18
720 732 4.159120 GCCTTTGCTAAAAATCAGTCGAC 58.841 43.478 7.70 7.70 33.53 4.20
721 733 3.120338 CGCCTTTGCTAAAAATCAGTCGA 60.120 43.478 0.00 0.00 34.43 4.20
722 734 3.120338 TCGCCTTTGCTAAAAATCAGTCG 60.120 43.478 0.00 0.00 34.43 4.18
723 735 4.419522 TCGCCTTTGCTAAAAATCAGTC 57.580 40.909 0.00 0.00 34.43 3.51
724 736 4.846779 TTCGCCTTTGCTAAAAATCAGT 57.153 36.364 0.00 0.00 34.43 3.41
725 737 5.287035 GTGATTCGCCTTTGCTAAAAATCAG 59.713 40.000 0.00 0.00 34.00 2.90
726 738 5.160641 GTGATTCGCCTTTGCTAAAAATCA 58.839 37.500 0.00 0.00 32.44 2.57
728 740 5.132897 TGTGATTCGCCTTTGCTAAAAAT 57.867 34.783 0.00 0.00 34.43 1.82
729 741 4.576216 TGTGATTCGCCTTTGCTAAAAA 57.424 36.364 0.00 0.00 34.43 1.94
730 742 4.576216 TTGTGATTCGCCTTTGCTAAAA 57.424 36.364 0.00 0.00 34.43 1.52
732 744 3.611530 GCTTTGTGATTCGCCTTTGCTAA 60.612 43.478 0.00 0.00 34.43 3.09
733 745 2.095263 GCTTTGTGATTCGCCTTTGCTA 60.095 45.455 0.00 0.00 34.43 3.49
734 746 1.336240 GCTTTGTGATTCGCCTTTGCT 60.336 47.619 0.00 0.00 34.43 3.91
735 747 1.063031 GCTTTGTGATTCGCCTTTGC 58.937 50.000 0.00 0.00 0.00 3.68
736 748 2.420628 TGCTTTGTGATTCGCCTTTG 57.579 45.000 0.00 0.00 0.00 2.77
737 749 2.821969 AGATGCTTTGTGATTCGCCTTT 59.178 40.909 0.00 0.00 0.00 3.11
739 751 2.119801 AGATGCTTTGTGATTCGCCT 57.880 45.000 0.00 0.00 0.00 5.52
740 752 2.032178 GGTAGATGCTTTGTGATTCGCC 59.968 50.000 0.00 0.00 0.00 5.54
741 753 2.032178 GGGTAGATGCTTTGTGATTCGC 59.968 50.000 0.00 0.00 0.00 4.70
742 754 2.614057 GGGGTAGATGCTTTGTGATTCG 59.386 50.000 0.00 0.00 0.00 3.34
743 755 3.378427 GTGGGGTAGATGCTTTGTGATTC 59.622 47.826 0.00 0.00 0.00 2.52
745 757 2.357154 GGTGGGGTAGATGCTTTGTGAT 60.357 50.000 0.00 0.00 0.00 3.06
746 758 1.004277 GGTGGGGTAGATGCTTTGTGA 59.996 52.381 0.00 0.00 0.00 3.58
747 759 1.463674 GGTGGGGTAGATGCTTTGTG 58.536 55.000 0.00 0.00 0.00 3.33
749 761 0.395724 GGGGTGGGGTAGATGCTTTG 60.396 60.000 0.00 0.00 0.00 2.77
751 763 2.375345 CGGGGTGGGGTAGATGCTT 61.375 63.158 0.00 0.00 0.00 3.91
753 765 4.564110 GCGGGGTGGGGTAGATGC 62.564 72.222 0.00 0.00 0.00 3.91
754 766 3.087253 TGCGGGGTGGGGTAGATG 61.087 66.667 0.00 0.00 0.00 2.90
761 773 3.583882 ATTTCAGGTGCGGGGTGGG 62.584 63.158 0.00 0.00 0.00 4.61
762 774 2.035626 ATTTCAGGTGCGGGGTGG 59.964 61.111 0.00 0.00 0.00 4.61
765 777 3.909662 CTGATTTCAGGTGCGGGG 58.090 61.111 0.00 0.00 40.20 5.73
773 785 0.842635 CTCCCCTCCCCTGATTTCAG 59.157 60.000 0.39 0.39 43.40 3.02
774 786 0.421495 TCTCCCCTCCCCTGATTTCA 59.579 55.000 0.00 0.00 0.00 2.69
775 787 1.135960 CTCTCCCCTCCCCTGATTTC 58.864 60.000 0.00 0.00 0.00 2.17
776 788 0.725133 TCTCTCCCCTCCCCTGATTT 59.275 55.000 0.00 0.00 0.00 2.17
780 792 1.505538 TCTAATCTCTCCCCTCCCCTG 59.494 57.143 0.00 0.00 0.00 4.45
782 794 2.545810 CATCTAATCTCTCCCCTCCCC 58.454 57.143 0.00 0.00 0.00 4.81
783 795 1.905894 GCATCTAATCTCTCCCCTCCC 59.094 57.143 0.00 0.00 0.00 4.30
784 796 2.901291 AGCATCTAATCTCTCCCCTCC 58.099 52.381 0.00 0.00 0.00 4.30
785 797 4.102367 ACAAAGCATCTAATCTCTCCCCTC 59.898 45.833 0.00 0.00 0.00 4.30
788 800 5.028549 TCACAAAGCATCTAATCTCTCCC 57.971 43.478 0.00 0.00 0.00 4.30
790 802 7.909121 CACAAATCACAAAGCATCTAATCTCTC 59.091 37.037 0.00 0.00 0.00 3.20
791 803 7.609146 TCACAAATCACAAAGCATCTAATCTCT 59.391 33.333 0.00 0.00 0.00 3.10
793 805 7.692460 TCACAAATCACAAAGCATCTAATCT 57.308 32.000 0.00 0.00 0.00 2.40
794 806 8.804743 CATTCACAAATCACAAAGCATCTAATC 58.195 33.333 0.00 0.00 0.00 1.75
795 807 8.525316 TCATTCACAAATCACAAAGCATCTAAT 58.475 29.630 0.00 0.00 0.00 1.73
796 808 7.809331 GTCATTCACAAATCACAAAGCATCTAA 59.191 33.333 0.00 0.00 0.00 2.10
800 812 5.693104 GTGTCATTCACAAATCACAAAGCAT 59.307 36.000 0.00 0.00 45.51 3.79
801 813 5.042593 GTGTCATTCACAAATCACAAAGCA 58.957 37.500 0.00 0.00 45.51 3.91
802 814 4.146961 CGTGTCATTCACAAATCACAAAGC 59.853 41.667 0.00 0.00 46.44 3.51
804 816 5.033507 CACGTGTCATTCACAAATCACAAA 58.966 37.500 7.58 0.00 46.44 2.83
806 818 3.625313 ACACGTGTCATTCACAAATCACA 59.375 39.130 17.22 0.00 46.44 3.58
807 819 4.209452 ACACGTGTCATTCACAAATCAC 57.791 40.909 17.22 0.00 46.44 3.06
808 820 4.466567 GACACGTGTCATTCACAAATCA 57.533 40.909 37.16 0.00 46.44 2.57
822 834 1.645034 GTCCTGATGGATGACACGTG 58.355 55.000 15.48 15.48 45.29 4.49
829 841 0.179073 GTGACCCGTCCTGATGGATG 60.179 60.000 6.98 0.00 45.29 3.51
830 842 0.617535 TGTGACCCGTCCTGATGGAT 60.618 55.000 6.98 0.00 45.29 3.41
831 843 1.229051 TGTGACCCGTCCTGATGGA 60.229 57.895 6.98 0.00 39.90 3.41
832 844 1.079127 GTGTGACCCGTCCTGATGG 60.079 63.158 0.00 0.00 37.23 3.51
833 845 1.079127 GGTGTGACCCGTCCTGATG 60.079 63.158 0.00 0.00 30.04 3.07
835 847 2.200370 AGGTGTGACCCGTCCTGA 59.800 61.111 0.00 0.00 39.75 3.86
838 850 0.464916 AAAACAGGTGTGACCCGTCC 60.465 55.000 0.00 0.00 39.75 4.79
839 851 2.243602 TAAAACAGGTGTGACCCGTC 57.756 50.000 0.00 0.00 39.75 4.79
840 852 2.943036 ATAAAACAGGTGTGACCCGT 57.057 45.000 0.00 0.00 39.75 5.28
841 853 4.509616 TCATATAAAACAGGTGTGACCCG 58.490 43.478 0.00 0.00 39.75 5.28
842 854 5.585047 GTCTCATATAAAACAGGTGTGACCC 59.415 44.000 0.00 0.00 39.75 4.46
843 855 5.585047 GGTCTCATATAAAACAGGTGTGACC 59.415 44.000 8.55 8.55 42.52 4.02
844 856 6.313905 CAGGTCTCATATAAAACAGGTGTGAC 59.686 42.308 0.00 0.00 34.39 3.67
848 860 5.745227 ACCAGGTCTCATATAAAACAGGTG 58.255 41.667 0.00 0.00 0.00 4.00
850 862 6.240549 AGACCAGGTCTCATATAAAACAGG 57.759 41.667 17.31 0.00 38.71 4.00
868 880 1.686587 CAGCCGTGGTATATGAGACCA 59.313 52.381 0.00 0.00 44.86 4.02
869 881 1.605712 GCAGCCGTGGTATATGAGACC 60.606 57.143 0.00 0.00 37.49 3.85
870 882 1.605712 GGCAGCCGTGGTATATGAGAC 60.606 57.143 0.00 0.00 0.00 3.36
871 883 0.679505 GGCAGCCGTGGTATATGAGA 59.320 55.000 0.00 0.00 0.00 3.27
872 884 0.392706 TGGCAGCCGTGGTATATGAG 59.607 55.000 7.03 0.00 0.00 2.90
875 887 0.764890 ACATGGCAGCCGTGGTATAT 59.235 50.000 32.93 12.72 44.23 0.86
876 888 0.544223 AACATGGCAGCCGTGGTATA 59.456 50.000 32.93 2.98 44.23 1.47
877 889 0.323360 AAACATGGCAGCCGTGGTAT 60.323 50.000 32.93 18.37 39.90 2.73
878 890 0.325272 TAAACATGGCAGCCGTGGTA 59.675 50.000 32.93 22.51 39.90 3.25
879 891 1.074072 TAAACATGGCAGCCGTGGT 59.926 52.632 32.93 27.15 43.07 4.16
880 892 1.506262 GTAAACATGGCAGCCGTGG 59.494 57.895 32.93 17.62 44.23 4.94
881 893 1.506262 GGTAAACATGGCAGCCGTG 59.494 57.895 29.36 29.36 45.34 4.94
882 894 2.038269 CGGTAAACATGGCAGCCGT 61.038 57.895 7.03 2.72 35.11 5.68
883 895 1.705337 CTCGGTAAACATGGCAGCCG 61.705 60.000 7.03 12.66 40.43 5.52
885 897 0.727398 GACTCGGTAAACATGGCAGC 59.273 55.000 0.00 0.00 0.00 5.25
886 898 2.093306 TGACTCGGTAAACATGGCAG 57.907 50.000 0.00 0.00 0.00 4.85
970 983 5.047377 GGGAGGCTAACATCTAGAATCTGAG 60.047 48.000 0.00 0.00 0.00 3.35
1022 1037 2.180769 CGAGACGAACGCCATGGA 59.819 61.111 18.40 0.00 0.00 3.41
1077 1092 2.125552 CTGCACCGGCGATGAGAA 60.126 61.111 4.84 0.00 45.35 2.87
1175 1190 3.448660 CCACACTACTGATCAGTGATCCA 59.551 47.826 33.76 15.73 45.10 3.41
1176 1191 3.701542 TCCACACTACTGATCAGTGATCC 59.298 47.826 33.76 11.93 45.10 3.36
1177 1192 4.677584 GTCCACACTACTGATCAGTGATC 58.322 47.826 33.76 23.75 45.10 2.92
1233 1251 4.685628 GCAAAATCAACACACGAATGGAAT 59.314 37.500 0.00 0.00 0.00 3.01
1458 4550 2.928416 GGAAGAACCCAGTTCGGTG 58.072 57.895 2.04 0.00 45.96 4.94
1470 4562 1.371183 CAGCGTGTCCAGGGAAGAA 59.629 57.895 0.00 0.00 0.00 2.52
2052 5198 1.903877 CGACCTTGATGCCCTGGAGT 61.904 60.000 0.00 0.00 0.00 3.85
2524 5679 0.751277 CCTTGTGGAGTTGTGGTGCA 60.751 55.000 0.00 0.00 34.57 4.57
2532 5687 1.425448 CCTTCCTTCCCTTGTGGAGTT 59.575 52.381 0.00 0.00 46.24 3.01
2533 5688 1.068121 CCTTCCTTCCCTTGTGGAGT 58.932 55.000 0.00 0.00 46.24 3.85
2534 5689 1.362224 TCCTTCCTTCCCTTGTGGAG 58.638 55.000 0.00 0.00 46.24 3.86
2535 5690 1.705186 CTTCCTTCCTTCCCTTGTGGA 59.295 52.381 0.00 0.00 43.18 4.02
2536 5691 1.272147 CCTTCCTTCCTTCCCTTGTGG 60.272 57.143 0.00 0.00 0.00 4.17
2537 5692 1.272147 CCCTTCCTTCCTTCCCTTGTG 60.272 57.143 0.00 0.00 0.00 3.33
2538 5693 1.076438 CCCTTCCTTCCTTCCCTTGT 58.924 55.000 0.00 0.00 0.00 3.16
2539 5694 1.076438 ACCCTTCCTTCCTTCCCTTG 58.924 55.000 0.00 0.00 0.00 3.61
2540 5695 1.076438 CACCCTTCCTTCCTTCCCTT 58.924 55.000 0.00 0.00 0.00 3.95
2646 5801 4.840115 TGATGATTTTGGCCCTCTCTTTTT 59.160 37.500 0.00 0.00 0.00 1.94
2647 5802 4.419282 TGATGATTTTGGCCCTCTCTTTT 58.581 39.130 0.00 0.00 0.00 2.27
2648 5803 4.051661 TGATGATTTTGGCCCTCTCTTT 57.948 40.909 0.00 0.00 0.00 2.52
2649 5804 3.744940 TGATGATTTTGGCCCTCTCTT 57.255 42.857 0.00 0.00 0.00 2.85
2650 5805 3.462579 AGATGATGATTTTGGCCCTCTCT 59.537 43.478 0.00 0.00 0.00 3.10
2651 5806 3.830121 AGATGATGATTTTGGCCCTCTC 58.170 45.455 0.00 0.00 0.00 3.20
2652 5807 3.967467 AGATGATGATTTTGGCCCTCT 57.033 42.857 0.00 0.00 0.00 3.69
2653 5808 3.505293 GCTAGATGATGATTTTGGCCCTC 59.495 47.826 0.00 0.00 0.00 4.30
2654 5809 3.117398 TGCTAGATGATGATTTTGGCCCT 60.117 43.478 0.00 0.00 0.00 5.19
2793 5963 6.371389 GGGTGAAACTGAAATTTAGTCTTCG 58.629 40.000 0.00 0.00 36.74 3.79
2844 6023 6.763303 ACAAATGAAAATGTCTTAAACGGC 57.237 33.333 0.00 0.00 0.00 5.68
2901 6080 9.313118 CATAATGTGCTAAATTTTTAAGGGGTC 57.687 33.333 0.00 0.00 0.00 4.46
2903 6082 9.313118 GACATAATGTGCTAAATTTTTAAGGGG 57.687 33.333 0.00 0.00 0.00 4.79
2940 6831 3.076621 CCATGTGTATGCTGACAACTGT 58.923 45.455 0.00 0.00 32.79 3.55
3027 6918 0.250684 TTGATGTTTGGAGCCGAGCA 60.251 50.000 0.00 0.00 0.00 4.26
3029 6920 1.522668 TGTTGATGTTTGGAGCCGAG 58.477 50.000 0.00 0.00 0.00 4.63
3062 6953 3.092301 GGGGATATGCAAGGCCTTATTC 58.908 50.000 20.00 6.70 0.00 1.75
3065 6956 1.425066 CTGGGGATATGCAAGGCCTTA 59.575 52.381 20.00 3.48 0.00 2.69
3068 6959 0.185901 TTCTGGGGATATGCAAGGCC 59.814 55.000 0.00 0.00 0.00 5.19
3082 6973 8.469200 TGAAAGACCAAAATATAATGCTTCTGG 58.531 33.333 0.00 0.00 0.00 3.86
3132 7033 1.572085 CGGCTCCTGTCTGCAAACAG 61.572 60.000 13.47 13.47 45.10 3.16
3137 7038 2.343758 GTTCGGCTCCTGTCTGCA 59.656 61.111 0.00 0.00 0.00 4.41
3141 7042 2.507324 GCTCGTTCGGCTCCTGTC 60.507 66.667 0.00 0.00 0.00 3.51
3159 7060 3.303132 CGTTGCCCGAATAGACAAATAGC 60.303 47.826 0.00 0.00 39.56 2.97
3188 7089 3.329225 GGATTTGGGGTTTTGGAAATGGA 59.671 43.478 0.00 0.00 0.00 3.41
3195 7096 1.350351 TGCATGGATTTGGGGTTTTGG 59.650 47.619 0.00 0.00 0.00 3.28
3224 7125 4.331168 GCATATTGATCGAAGGGTCTATGC 59.669 45.833 7.78 7.78 35.12 3.14
3247 7148 5.159925 TGACTTGTGTTGAATTGTTGTGTG 58.840 37.500 0.00 0.00 0.00 3.82
3308 7209 4.033358 GCTTGACCTCATGAATAACGACTG 59.967 45.833 0.00 0.00 0.00 3.51
3312 7213 3.000322 GTCGCTTGACCTCATGAATAACG 60.000 47.826 0.00 0.00 36.58 3.18
3313 7214 4.184629 AGTCGCTTGACCTCATGAATAAC 58.815 43.478 0.00 0.00 43.97 1.89
3351 7252 5.281727 GTTCACCAACCAAAAGAATGAGAC 58.718 41.667 0.00 0.00 0.00 3.36
3384 7285 3.259374 CCGACACTAGCCTCATGGATAAT 59.741 47.826 0.00 0.00 33.35 1.28
3435 7336 2.852495 GAAACATGAGGCTCGCGGGA 62.852 60.000 12.03 0.92 0.00 5.14
3441 7342 5.528043 TGAGAGATAGAAACATGAGGCTC 57.472 43.478 7.79 7.79 0.00 4.70
3479 7380 3.511934 AGCTTGAGAAGTCGAAGGTATGT 59.488 43.478 0.00 0.00 0.00 2.29
3480 7381 4.109050 GAGCTTGAGAAGTCGAAGGTATG 58.891 47.826 0.00 0.00 0.00 2.39
3490 7391 3.080319 GAGCAAATGGAGCTTGAGAAGT 58.920 45.455 0.00 0.00 43.58 3.01
3491 7392 3.345414 AGAGCAAATGGAGCTTGAGAAG 58.655 45.455 0.00 0.00 43.58 2.85
3517 7418 5.835819 AGGATGAATATGGAGAAGACGAAGA 59.164 40.000 0.00 0.00 0.00 2.87
3530 7431 7.592885 AATTGAGTGGGAAAGGATGAATATG 57.407 36.000 0.00 0.00 0.00 1.78
3547 7448 5.010282 GTGTGGGATAGGTTCAAATTGAGT 58.990 41.667 0.00 0.00 0.00 3.41
3557 7458 1.615424 AGCCGGTGTGGGATAGGTT 60.615 57.895 1.90 0.00 38.63 3.50
3559 7460 2.505982 CAGCCGGTGTGGGATAGG 59.494 66.667 1.90 0.00 38.63 2.57
3561 7462 3.792736 GGCAGCCGGTGTGGGATA 61.793 66.667 1.90 0.00 38.63 2.59
3572 7473 1.322538 ATGGAATTCAACCGGCAGCC 61.323 55.000 0.00 0.00 0.00 4.85
3573 7474 0.101219 GATGGAATTCAACCGGCAGC 59.899 55.000 0.00 0.00 0.00 5.25
3625 7526 3.304829 AGGAGACAAGAAGGAGGATAGC 58.695 50.000 0.00 0.00 0.00 2.97
3626 7527 5.948742 AAAGGAGACAAGAAGGAGGATAG 57.051 43.478 0.00 0.00 0.00 2.08
3671 7573 3.922640 GCCCTCTCGCTAGCCAGG 61.923 72.222 9.66 11.75 0.00 4.45
3705 7607 2.777692 TCCCCAACAACAACTTCTCTCT 59.222 45.455 0.00 0.00 0.00 3.10
3714 7616 1.310904 GCTACGTTCCCCAACAACAA 58.689 50.000 0.00 0.00 32.14 2.83
3715 7617 0.180642 TGCTACGTTCCCCAACAACA 59.819 50.000 0.00 0.00 32.14 3.33
3716 7618 0.872388 CTGCTACGTTCCCCAACAAC 59.128 55.000 0.00 0.00 32.14 3.32
3717 7619 0.759959 TCTGCTACGTTCCCCAACAA 59.240 50.000 0.00 0.00 32.14 2.83
3718 7620 0.759959 TTCTGCTACGTTCCCCAACA 59.240 50.000 0.00 0.00 32.14 3.33
3719 7621 1.886886 TTTCTGCTACGTTCCCCAAC 58.113 50.000 0.00 0.00 0.00 3.77
3720 7622 2.871096 ATTTCTGCTACGTTCCCCAA 57.129 45.000 0.00 0.00 0.00 4.12
3721 7623 2.039216 TGAATTTCTGCTACGTTCCCCA 59.961 45.455 0.00 0.00 0.00 4.96
3722 7624 2.706890 TGAATTTCTGCTACGTTCCCC 58.293 47.619 0.00 0.00 0.00 4.81
3723 7625 4.759516 TTTGAATTTCTGCTACGTTCCC 57.240 40.909 0.00 0.00 0.00 3.97
3724 7626 7.637709 AAATTTTGAATTTCTGCTACGTTCC 57.362 32.000 0.00 0.00 0.00 3.62
3725 7627 9.567917 GAAAAATTTTGAATTTCTGCTACGTTC 57.432 29.630 3.73 0.00 31.86 3.95
3726 7628 9.313118 AGAAAAATTTTGAATTTCTGCTACGTT 57.687 25.926 3.73 0.00 40.77 3.99
3727 7629 8.871686 AGAAAAATTTTGAATTTCTGCTACGT 57.128 26.923 3.73 0.00 40.77 3.57
3730 7632 9.959749 ACGTAGAAAAATTTTGAATTTCTGCTA 57.040 25.926 3.73 3.24 41.93 3.49
3731 7633 8.755018 CACGTAGAAAAATTTTGAATTTCTGCT 58.245 29.630 3.73 3.95 41.93 4.24
3732 7634 8.539674 ACACGTAGAAAAATTTTGAATTTCTGC 58.460 29.630 3.73 5.97 41.93 4.26
3734 7636 9.796120 TGACACGTAGAAAAATTTTGAATTTCT 57.204 25.926 3.73 5.81 43.66 2.52
3735 7637 9.829637 GTGACACGTAGAAAAATTTTGAATTTC 57.170 29.630 3.73 0.00 34.14 2.17
3736 7638 8.813282 GGTGACACGTAGAAAAATTTTGAATTT 58.187 29.630 3.73 0.00 0.00 1.82
3737 7639 7.976734 TGGTGACACGTAGAAAAATTTTGAATT 59.023 29.630 3.73 0.00 33.40 2.17
3738 7640 7.484975 TGGTGACACGTAGAAAAATTTTGAAT 58.515 30.769 3.73 0.00 33.40 2.57
3739 7641 6.853720 TGGTGACACGTAGAAAAATTTTGAA 58.146 32.000 3.73 0.00 33.40 2.69
3740 7642 6.438259 TGGTGACACGTAGAAAAATTTTGA 57.562 33.333 3.73 0.00 33.40 2.69
3741 7643 6.970043 TCTTGGTGACACGTAGAAAAATTTTG 59.030 34.615 3.73 0.00 42.67 2.44
3742 7644 7.090953 TCTTGGTGACACGTAGAAAAATTTT 57.909 32.000 0.00 0.00 42.67 1.82
3743 7645 6.687081 TCTTGGTGACACGTAGAAAAATTT 57.313 33.333 0.00 0.00 42.67 1.82
3744 7646 6.710744 AGATCTTGGTGACACGTAGAAAAATT 59.289 34.615 11.01 0.00 42.67 1.82
3745 7647 6.231211 AGATCTTGGTGACACGTAGAAAAAT 58.769 36.000 11.01 0.00 42.67 1.82
3746 7648 5.607477 AGATCTTGGTGACACGTAGAAAAA 58.393 37.500 11.01 0.00 42.67 1.94
3747 7649 5.209818 AGATCTTGGTGACACGTAGAAAA 57.790 39.130 11.01 0.00 42.67 2.29
3748 7650 4.866508 AGATCTTGGTGACACGTAGAAA 57.133 40.909 11.01 0.00 42.67 2.52
3749 7651 5.886474 AGATAGATCTTGGTGACACGTAGAA 59.114 40.000 0.00 0.00 42.67 2.10
3750 7652 5.437946 AGATAGATCTTGGTGACACGTAGA 58.562 41.667 0.00 9.78 42.67 2.59
3751 7653 5.759506 AGATAGATCTTGGTGACACGTAG 57.240 43.478 0.00 0.00 42.67 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.