Multiple sequence alignment - TraesCS6B01G307200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G307200 chr6B 100.000 7393 0 0 1 7393 550323206 550315814 0.000000e+00 13653.0
1 TraesCS6B01G307200 chr6B 95.333 300 13 1 7095 7393 135991451 135991152 6.710000e-130 475.0
2 TraesCS6B01G307200 chr6B 88.889 81 9 0 6640 6720 667176049 667175969 4.720000e-17 100.0
3 TraesCS6B01G307200 chr6A 94.706 4156 138 35 2389 6496 506538984 506534863 0.000000e+00 6381.0
4 TraesCS6B01G307200 chr6A 91.625 1994 110 33 2 1977 506541322 506539368 0.000000e+00 2704.0
5 TraesCS6B01G307200 chr6A 92.647 340 11 2 1969 2294 506539319 506538980 1.870000e-130 477.0
6 TraesCS6B01G307200 chr6A 84.244 311 38 8 6735 7039 506526557 506526252 7.260000e-75 292.0
7 TraesCS6B01G307200 chr6A 91.139 79 6 1 6563 6641 506534845 506534768 1.010000e-18 106.0
8 TraesCS6B01G307200 chr6A 100.000 53 0 0 7041 7093 9363986 9363934 1.700000e-16 99.0
9 TraesCS6B01G307200 chr6D 97.001 1867 46 7 3820 5680 365729954 365728092 0.000000e+00 3129.0
10 TraesCS6B01G307200 chr6D 96.246 1838 57 7 1969 3797 365731931 365730097 0.000000e+00 3001.0
11 TraesCS6B01G307200 chr6D 93.212 1370 52 14 630 1977 365733330 365731980 0.000000e+00 1977.0
12 TraesCS6B01G307200 chr6D 93.405 834 33 8 5679 6496 365727930 365727103 0.000000e+00 1216.0
13 TraesCS6B01G307200 chr6D 95.349 301 11 2 7095 7393 472640083 472640382 6.710000e-130 475.0
14 TraesCS6B01G307200 chr6D 83.388 307 34 9 6746 7042 365726853 365726554 1.220000e-67 268.0
15 TraesCS6B01G307200 chr6D 91.463 82 7 0 6560 6641 365727088 365727007 6.060000e-21 113.0
16 TraesCS6B01G307200 chr6D 89.333 75 7 1 6640 6714 294774848 294774921 7.900000e-15 93.5
17 TraesCS6B01G307200 chr5B 96.990 299 8 1 7095 7393 37076802 37077099 1.110000e-137 501.0
18 TraesCS6B01G307200 chr2B 96.321 299 11 0 7095 7393 58536134 58535836 6.660000e-135 492.0
19 TraesCS6B01G307200 chr2B 77.804 419 80 10 2 412 790374257 790374670 5.730000e-61 246.0
20 TraesCS6B01G307200 chr2B 98.214 56 1 0 7038 7093 776432208 776432263 1.700000e-16 99.0
21 TraesCS6B01G307200 chr1D 96.321 299 11 0 7095 7393 426753575 426753277 6.660000e-135 492.0
22 TraesCS6B01G307200 chr1D 95.667 300 11 2 7095 7393 396286106 396286404 1.440000e-131 481.0
23 TraesCS6B01G307200 chr1D 77.706 462 83 15 7 458 389330647 389331098 1.580000e-66 265.0
24 TraesCS6B01G307200 chr1D 76.253 459 86 20 7 458 325966262 325966704 9.650000e-54 222.0
25 TraesCS6B01G307200 chr1D 95.312 64 3 0 7030 7093 426753681 426753618 1.310000e-17 102.0
26 TraesCS6B01G307200 chr2D 95.987 299 11 1 7095 7393 97621134 97620837 1.120000e-132 484.0
27 TraesCS6B01G307200 chr2D 77.273 484 103 7 1 478 520585266 520585748 2.030000e-70 278.0
28 TraesCS6B01G307200 chr2D 98.214 56 1 0 7038 7093 36579723 36579778 1.700000e-16 99.0
29 TraesCS6B01G307200 chr2D 87.059 85 7 2 6640 6720 407254489 407254405 7.900000e-15 93.5
30 TraesCS6B01G307200 chr3B 94.983 299 15 0 7095 7393 782443784 782444082 3.120000e-128 470.0
31 TraesCS6B01G307200 chr1B 94.983 299 14 1 7095 7393 85405524 85405821 1.120000e-127 468.0
32 TraesCS6B01G307200 chr1B 88.889 81 7 2 6640 6719 584135431 584135352 1.700000e-16 99.0
33 TraesCS6B01G307200 chr1B 85.556 90 9 3 6636 6721 327481212 327481301 2.840000e-14 91.6
34 TraesCS6B01G307200 chr3D 78.465 469 87 12 1 464 147921300 147921759 2.020000e-75 294.0
35 TraesCS6B01G307200 chr3D 95.000 60 2 1 7034 7093 100470005 100469947 7.900000e-15 93.5
36 TraesCS6B01G307200 chr3D 86.585 82 9 2 6640 6721 120305791 120305870 1.020000e-13 89.8
37 TraesCS6B01G307200 chr7D 79.707 409 73 9 2 404 41930356 41929952 3.380000e-73 287.0
38 TraesCS6B01G307200 chr7D 79.805 411 64 16 2 402 154647040 154647441 1.570000e-71 281.0
39 TraesCS6B01G307200 chr7D 80.844 308 56 3 2 307 329100383 329100077 9.590000e-59 239.0
40 TraesCS6B01G307200 chr7D 72.803 842 169 46 4520 5342 188579512 188580312 1.600000e-56 231.0
41 TraesCS6B01G307200 chr7D 85.377 212 28 3 2626 2835 188577586 188577796 4.490000e-52 217.0
42 TraesCS6B01G307200 chr7D 77.049 305 46 17 2895 3181 188577938 188578236 3.570000e-33 154.0
43 TraesCS6B01G307200 chr7D 98.214 56 1 0 7038 7093 27321494 27321549 1.700000e-16 99.0
44 TraesCS6B01G307200 chr5D 77.848 474 76 20 2 464 344989250 344989705 4.400000e-67 267.0
45 TraesCS6B01G307200 chr5D 89.157 83 6 3 6639 6721 498669758 498669837 4.720000e-17 100.0
46 TraesCS6B01G307200 chr5D 89.474 76 6 2 6639 6714 26518301 26518228 2.200000e-15 95.3
47 TraesCS6B01G307200 chr7B 72.922 842 170 43 4520 5342 332806835 332807637 9.590000e-59 239.0
48 TraesCS6B01G307200 chr7B 84.475 219 30 4 2619 2835 332804902 332805118 5.810000e-51 213.0
49 TraesCS6B01G307200 chr7B 77.228 303 49 16 2895 3181 332805262 332805560 7.680000e-35 159.0
50 TraesCS6B01G307200 chr7A 76.129 310 64 8 5040 5345 195403918 195403615 3.570000e-33 154.0
51 TraesCS6B01G307200 chr7A 89.333 75 8 0 6639 6713 60725519 60725593 2.200000e-15 95.3
52 TraesCS6B01G307200 chr2A 98.276 58 1 0 7036 7093 775968754 775968811 1.310000e-17 102.0
53 TraesCS6B01G307200 chr2A 98.246 57 0 1 7038 7093 779164174 779164118 1.700000e-16 99.0
54 TraesCS6B01G307200 chr2A 76.282 156 27 6 2 153 293045742 293045593 2.860000e-09 75.0
55 TraesCS6B01G307200 chr2A 93.023 43 3 0 3931 3973 66294843 66294801 6.190000e-06 63.9
56 TraesCS6B01G307200 chr4A 98.214 56 1 0 7038 7093 235650414 235650469 1.700000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G307200 chr6B 550315814 550323206 7392 True 13653.000000 13653 100.000000 1 7393 1 chr6B.!!$R2 7392
1 TraesCS6B01G307200 chr6A 506534768 506541322 6554 True 2417.000000 6381 92.529250 2 6641 4 chr6A.!!$R3 6639
2 TraesCS6B01G307200 chr6D 365726554 365733330 6776 True 1617.333333 3129 92.452500 630 7042 6 chr6D.!!$R1 6412
3 TraesCS6B01G307200 chr7D 188577586 188580312 2726 False 200.666667 231 78.409667 2626 5342 3 chr7D.!!$F3 2716
4 TraesCS6B01G307200 chr7B 332804902 332807637 2735 False 203.666667 239 78.208333 2619 5342 3 chr7B.!!$F1 2723

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
495 501 0.173708 GTGGCGTCTAGGTTGAGGAG 59.826 60.000 0.00 0.00 0.00 3.69 F
1286 1304 1.227943 GCCAGATCCCGCATTGCTA 60.228 57.895 7.12 0.00 0.00 3.49 F
1735 1759 0.039256 ATTCATGGTTGTGTGTGCGC 60.039 50.000 0.00 0.00 0.00 6.09 F
1910 1940 1.064832 GCTCATTTCCTCAGGAAGGCT 60.065 52.381 6.17 0.00 45.78 4.58 F
2039 2183 1.712401 CTCTCTTGCTCTCACTGTGC 58.288 55.000 2.12 0.00 35.88 4.57 F
2116 2274 2.449518 TGTGGAAGGCAGTCCCCA 60.450 61.111 4.93 0.00 36.80 4.96 F
3823 4292 1.556911 CCCTAGAAGGCTTTCTGCTCA 59.443 52.381 20.48 0.00 43.41 4.26 F
5648 6351 0.390492 GTTTGCCAAGGAGCTGCTTT 59.610 50.000 18.91 0.65 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1373 1393 0.596082 TCGCGTCAGATCAGTGACAA 59.404 50.000 5.77 0.00 46.19 3.18 R
2116 2274 2.158564 CCATATGACATTGTGGCCTCCT 60.159 50.000 3.32 0.00 0.00 3.69 R
3382 3728 2.416547 CAGTATGCAAGTTCAGGAACCG 59.583 50.000 8.47 2.24 42.06 4.44 R
3636 3984 4.078571 ACCCTATATGTGGACCTCAGAAGA 60.079 45.833 2.23 0.00 0.00 2.87 R
3788 4136 7.455323 AGCCTTCTAGGGAATCTAAGTATTACC 59.545 40.741 0.00 0.00 39.81 2.85 R
4409 5077 8.204836 GGGAAACTGTTATTTATCTCAGAGCTA 58.795 37.037 0.00 0.00 0.00 3.32 R
6041 6917 0.250234 CCGCCTTGAGAACATCCTGA 59.750 55.000 0.00 0.00 0.00 3.86 R
7340 8358 0.027324 GTAGGCGGAGAAGTACGTCG 59.973 60.000 3.05 0.00 40.09 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.795623 TGTAGTAGACATTCGGGAAGC 57.204 47.619 0.00 0.00 31.20 3.86
43 45 0.744874 CGGGAAGCCGTCATCTAAGA 59.255 55.000 0.00 0.00 0.00 2.10
80 82 2.525055 CACAAGAACAACAAACACCCG 58.475 47.619 0.00 0.00 0.00 5.28
100 102 3.990469 CCGCAATGAAGAGAAGCGTATAT 59.010 43.478 0.00 0.00 46.26 0.86
106 108 7.359598 GCAATGAAGAGAAGCGTATATCGAAAT 60.360 37.037 0.00 0.00 42.86 2.17
124 126 5.125900 TCGAAATGATCTAACCCGTAGACAA 59.874 40.000 0.00 0.00 41.75 3.18
129 131 4.400251 TGATCTAACCCGTAGACAAACGAT 59.600 41.667 0.00 0.00 45.68 3.73
134 136 3.084039 ACCCGTAGACAAACGATCACTA 58.916 45.455 0.00 0.00 45.68 2.74
136 138 4.103357 CCCGTAGACAAACGATCACTAAG 58.897 47.826 0.00 0.00 45.68 2.18
140 142 5.285607 CGTAGACAAACGATCACTAAGGAAC 59.714 44.000 0.00 0.00 45.68 3.62
176 178 2.178912 TGGATCCACCGAAGACAAAC 57.821 50.000 11.44 0.00 42.61 2.93
178 180 1.337447 GGATCCACCGAAGACAAACGA 60.337 52.381 6.95 0.00 0.00 3.85
216 218 0.601841 TTCGCCGAAGACAAACCTCC 60.602 55.000 0.00 0.00 0.00 4.30
253 255 1.967597 GCTAGAAGCACCGCCGAAAC 61.968 60.000 0.00 0.00 41.89 2.78
254 256 1.683790 CTAGAAGCACCGCCGAAACG 61.684 60.000 0.00 0.00 0.00 3.60
255 257 2.144833 TAGAAGCACCGCCGAAACGA 62.145 55.000 0.00 0.00 34.06 3.85
263 265 4.289312 GCCGAAACGAGGGCTTAA 57.711 55.556 0.00 0.00 45.93 1.85
264 266 1.792301 GCCGAAACGAGGGCTTAAC 59.208 57.895 0.00 0.00 45.93 2.01
265 267 1.963190 GCCGAAACGAGGGCTTAACG 61.963 60.000 0.00 0.00 45.93 3.18
266 268 1.356527 CCGAAACGAGGGCTTAACGG 61.357 60.000 0.00 0.00 0.00 4.44
267 269 0.388907 CGAAACGAGGGCTTAACGGA 60.389 55.000 0.00 0.00 0.00 4.69
302 305 4.124351 TACGAAGAGCCACCGCCG 62.124 66.667 0.00 0.00 34.57 6.46
320 323 1.723608 CGCCTCGTCTCTCTGAGCAT 61.724 60.000 0.00 0.00 0.00 3.79
329 332 3.431572 GTCTCTCTGAGCATGACACAAAC 59.568 47.826 15.25 0.00 0.00 2.93
343 346 7.429633 CATGACACAAACCCTAACAAAACATA 58.570 34.615 0.00 0.00 0.00 2.29
344 347 7.033530 TGACACAAACCCTAACAAAACATAG 57.966 36.000 0.00 0.00 0.00 2.23
347 350 8.245195 ACACAAACCCTAACAAAACATAGAAT 57.755 30.769 0.00 0.00 0.00 2.40
371 377 4.439253 AGTAGAAAACAAAGCACTCCCT 57.561 40.909 0.00 0.00 0.00 4.20
380 386 1.494960 AAGCACTCCCTTTGGCAAAA 58.505 45.000 14.43 0.00 0.00 2.44
386 392 2.506957 CCCTTTGGCAAAAGCCGGT 61.507 57.895 14.43 0.00 41.33 5.28
406 412 4.552365 CCACCGCGCCTCCATGAT 62.552 66.667 0.00 0.00 0.00 2.45
422 428 3.768757 CCATGATCCTAAAGGCCACAAAA 59.231 43.478 5.01 0.00 34.44 2.44
425 431 4.934356 TGATCCTAAAGGCCACAAAAGAT 58.066 39.130 5.01 0.00 34.44 2.40
435 441 2.787994 CCACAAAAGATGAGGCAGACT 58.212 47.619 0.00 0.00 32.80 3.24
437 443 2.095364 CACAAAAGATGAGGCAGACTGC 60.095 50.000 19.55 19.55 44.08 4.40
471 477 1.227118 GAGGCGCAGAACCTAGAGC 60.227 63.158 10.83 0.00 37.77 4.09
472 478 1.949847 GAGGCGCAGAACCTAGAGCA 61.950 60.000 10.83 0.00 37.77 4.26
482 488 3.760035 CTAGAGCACCGGTGGCGT 61.760 66.667 34.58 20.21 36.08 5.68
495 501 0.173708 GTGGCGTCTAGGTTGAGGAG 59.826 60.000 0.00 0.00 0.00 3.69
527 533 1.300156 GTGGCTGAGCGATGCGATA 60.300 57.895 0.00 0.00 0.00 2.92
562 568 7.231317 AGTGTTTGTATTGTGACCAGATTGAAT 59.769 33.333 0.00 0.00 0.00 2.57
568 574 9.295825 TGTATTGTGACCAGATTGAATTTTACT 57.704 29.630 0.00 0.00 0.00 2.24
626 632 5.091552 TGTTTGGAGTAGGAGTAAGACCAT 58.908 41.667 0.00 0.00 0.00 3.55
627 633 5.546499 TGTTTGGAGTAGGAGTAAGACCATT 59.454 40.000 0.00 0.00 0.00 3.16
692 703 3.425162 AACCCAAACCAACTTTTTGCA 57.575 38.095 0.00 0.00 33.37 4.08
764 778 6.153851 TCGATATTAAAGACCCTTGACACAGA 59.846 38.462 0.00 0.00 0.00 3.41
829 843 1.599797 CCGAAAAACCCACCGAGCT 60.600 57.895 0.00 0.00 0.00 4.09
830 844 1.574428 CGAAAAACCCACCGAGCTG 59.426 57.895 0.00 0.00 0.00 4.24
1011 1029 3.655810 CTCCACTGAGCCAGCCGTC 62.656 68.421 2.50 0.00 34.37 4.79
1012 1030 4.007644 CCACTGAGCCAGCCGTCA 62.008 66.667 2.50 0.00 34.37 4.35
1013 1031 2.740055 CACTGAGCCAGCCGTCAC 60.740 66.667 2.50 0.00 34.37 3.67
1058 1076 1.323827 CGCATCGACGATACGAGCAG 61.324 60.000 22.82 9.23 45.22 4.24
1144 1162 1.447489 CTCGGAGGTGCAGCAGAAG 60.447 63.158 19.63 5.97 0.00 2.85
1286 1304 1.227943 GCCAGATCCCGCATTGCTA 60.228 57.895 7.12 0.00 0.00 3.49
1290 1308 1.600916 GATCCCGCATTGCTACCCC 60.601 63.158 7.12 0.00 0.00 4.95
1373 1393 3.187700 CGTTAAGCTTAGGCGTCTCATT 58.812 45.455 18.40 0.00 44.37 2.57
1417 1437 1.738099 CTTTCGGGTGGCGAGACTG 60.738 63.158 0.00 0.00 0.00 3.51
1429 1449 1.410517 GCGAGACTGGGATCTGATTCA 59.589 52.381 0.00 0.00 0.00 2.57
1465 1485 1.651987 CGGCGTGATAATTGTGACCT 58.348 50.000 0.00 0.00 0.00 3.85
1481 1501 1.081108 CCTCCGCTAGCGTAGATGC 60.081 63.158 33.18 0.00 37.81 3.91
1541 1561 5.923684 ACGAGAATCTCAGAAAGTTCAGTTC 59.076 40.000 11.18 0.00 0.00 3.01
1547 1567 5.734720 TCTCAGAAAGTTCAGTTCAGTTGT 58.265 37.500 0.00 0.00 0.00 3.32
1548 1568 5.812642 TCTCAGAAAGTTCAGTTCAGTTGTC 59.187 40.000 0.00 0.00 0.00 3.18
1552 1572 1.933853 AGTTCAGTTCAGTTGTCGTGC 59.066 47.619 0.00 0.00 0.00 5.34
1558 1578 1.396996 GTTCAGTTGTCGTGCTTGTGT 59.603 47.619 0.00 0.00 0.00 3.72
1638 1661 6.484364 AGGATCCATTGTTTTGTTGACTTT 57.516 33.333 15.82 0.00 0.00 2.66
1712 1736 0.253044 TTGACTGGTGCCCTGATAGC 59.747 55.000 5.36 0.00 0.00 2.97
1733 1757 3.311106 CTGAATTCATGGTTGTGTGTGC 58.689 45.455 8.96 0.00 0.00 4.57
1735 1759 0.039256 ATTCATGGTTGTGTGTGCGC 60.039 50.000 0.00 0.00 0.00 6.09
1835 1865 2.279717 GCGATCGCTGCTGATCCA 60.280 61.111 31.94 0.00 41.39 3.41
1850 1880 1.689243 ATCCAGCTGGCGCTCATGTA 61.689 55.000 28.91 7.75 45.15 2.29
1865 1895 2.135139 CATGTAATCAGCCACGCGTAT 58.865 47.619 13.44 0.00 0.00 3.06
1910 1940 1.064832 GCTCATTTCCTCAGGAAGGCT 60.065 52.381 6.17 0.00 45.78 4.58
2004 2148 8.233190 AGAAATTCTTATGAGAAAACAGAAGCG 58.767 33.333 3.79 0.00 44.61 4.68
2039 2183 1.712401 CTCTCTTGCTCTCACTGTGC 58.288 55.000 2.12 0.00 35.88 4.57
2116 2274 2.449518 TGTGGAAGGCAGTCCCCA 60.450 61.111 4.93 0.00 36.80 4.96
2247 2405 8.570038 TCCAGGTTACAGGAATATATTGGTTA 57.430 34.615 1.78 0.00 28.10 2.85
2267 2425 8.148437 TGGTTATGTTATAGTCACCAAGGTTA 57.852 34.615 0.00 0.00 31.24 2.85
2320 2479 4.688413 TGTCTTTTTGTTTGCACCAAGTTC 59.312 37.500 0.00 0.00 0.00 3.01
2330 2489 6.265196 TGTTTGCACCAAGTTCTAAGATCAAT 59.735 34.615 0.00 0.00 0.00 2.57
2341 2500 9.469807 AAGTTCTAAGATCAATCTAACATAGCG 57.530 33.333 0.00 0.00 35.76 4.26
2352 2511 5.066968 TCTAACATAGCGTGAACACATCA 57.933 39.130 5.80 0.00 35.05 3.07
2360 2519 7.280876 ACATAGCGTGAACACATCATTCTAAAT 59.719 33.333 5.80 0.00 40.97 1.40
2366 2525 9.265938 CGTGAACACATCATTCTAAATGTTTAG 57.734 33.333 6.24 6.24 40.97 1.85
2384 2543 7.920160 TGTTTAGTCATGAATGCAGTGATAA 57.080 32.000 5.80 0.00 0.00 1.75
2425 2584 4.516698 TCCGAACGATATACTACAAGGTCC 59.483 45.833 0.00 0.00 0.00 4.46
2837 2996 5.466819 TCTTGTAATAATCGGAGGTATGCG 58.533 41.667 0.00 0.00 42.35 4.73
3055 3307 3.689649 CAGTGCAAGTATGTACCTTTCCC 59.310 47.826 0.00 0.00 42.48 3.97
3243 3504 5.919348 ATGATGGTTCCACTATCTCCATT 57.081 39.130 0.00 0.00 37.06 3.16
3294 3555 7.036996 TGCATTTGTGAGTTCATCTGTTTAA 57.963 32.000 0.00 0.00 0.00 1.52
3576 3924 8.310382 CCATTGATTTATTTGGTTAACACCTGA 58.690 33.333 8.10 0.00 44.61 3.86
3636 3984 9.975218 ATTATATTCACAGTTTACTTGACCCTT 57.025 29.630 0.00 0.00 0.00 3.95
3762 4110 6.713762 TTTGGTTTCCTATATGAAGCATGG 57.286 37.500 6.86 0.00 31.75 3.66
3823 4292 1.556911 CCCTAGAAGGCTTTCTGCTCA 59.443 52.381 20.48 0.00 43.41 4.26
4025 4510 8.170553 GCTTGTTGTATATGCAAAAATTCCTTG 58.829 33.333 9.29 0.00 0.00 3.61
4224 4858 6.212888 ACCTTATCTTGCCATTTGAATGTC 57.787 37.500 3.30 0.00 34.60 3.06
4509 5178 7.589574 TTGATTTGCAATTTCACTGATGATG 57.410 32.000 11.06 0.00 33.85 3.07
4796 5467 8.729756 TGTAACACATGAAATCATCTTTCGATT 58.270 29.630 0.00 0.00 33.61 3.34
4949 5641 3.321396 TGCATTTTCTGTGGATTTGCTCA 59.679 39.130 0.00 0.00 0.00 4.26
4972 5664 4.588528 ACAACTGCCAGTTTAATTGGATGT 59.411 37.500 7.51 5.06 36.03 3.06
5124 5823 1.401539 GGTGCAATGCCTTCGAAGTTC 60.402 52.381 23.03 14.66 0.00 3.01
5205 5905 9.933723 AAATTGCTTTGCTGTCTATTTATCTTT 57.066 25.926 0.00 0.00 0.00 2.52
5211 5911 6.349973 TGCTGTCTATTTATCTTTTGAGCG 57.650 37.500 0.00 0.00 0.00 5.03
5300 6000 4.378874 GCCACTGTGACAAATCTTAAGAGC 60.379 45.833 11.53 0.30 0.00 4.09
5388 6088 6.877611 ACCTTTTAGTTCATGTAACCACTG 57.122 37.500 0.00 0.00 39.03 3.66
5390 6090 5.240623 CCTTTTAGTTCATGTAACCACTGCA 59.759 40.000 0.00 0.00 39.03 4.41
5403 6104 7.997482 TGTAACCACTGCAATTTTTACAAGTA 58.003 30.769 7.73 0.00 0.00 2.24
5448 6149 2.468777 GCGCAACTCACATCTGTTTTTG 59.531 45.455 0.30 0.00 0.00 2.44
5476 6177 5.244862 TCAGTCCATGATGACCGTGAAGG 62.245 52.174 0.00 0.00 38.52 3.46
5535 6236 1.202734 CCAGCTGTGCATATGGCTAGT 60.203 52.381 13.81 0.00 45.15 2.57
5616 6319 6.603201 TGAAGAGAAAGGTTGTCATGTTTTCT 59.397 34.615 0.00 5.95 39.91 2.52
5648 6351 0.390492 GTTTGCCAAGGAGCTGCTTT 59.610 50.000 18.91 0.65 0.00 3.51
5649 6352 0.675633 TTTGCCAAGGAGCTGCTTTC 59.324 50.000 18.91 13.23 0.00 2.62
5651 6354 0.467844 TGCCAAGGAGCTGCTTTCAA 60.468 50.000 18.91 3.42 0.00 2.69
5652 6355 0.893447 GCCAAGGAGCTGCTTTCAAT 59.107 50.000 18.91 0.00 0.00 2.57
5653 6356 1.274447 GCCAAGGAGCTGCTTTCAATT 59.726 47.619 18.91 0.00 0.00 2.32
5661 6364 4.401714 GAGCTGCTTTCAATTCTTCTTCG 58.598 43.478 2.53 0.00 0.00 3.79
5915 6791 6.234177 ACTTGGAGAAGGTAGTTTTCATGAG 58.766 40.000 0.00 0.00 32.95 2.90
5966 6842 1.473257 GCACGGCACCTCTCATTGATA 60.473 52.381 0.00 0.00 0.00 2.15
6041 6917 0.545309 TAGTGAAGCCTGGGTGCTCT 60.545 55.000 12.68 12.68 41.80 4.09
6116 6992 4.293494 TGGCTATCATGACTTCCTCTTCT 58.707 43.478 0.00 0.00 0.00 2.85
6183 7062 2.865343 ATCTACTACGCGTTTCCTGG 57.135 50.000 20.78 3.58 0.00 4.45
6204 7083 4.263639 TGGTTCTCTTTTGCTCCATCTGAT 60.264 41.667 0.00 0.00 0.00 2.90
6258 7137 7.039722 TCCCATGGTTTATTCTTTTCCTAGT 57.960 36.000 11.73 0.00 0.00 2.57
6314 7193 1.153706 GCGTATGCGGGTGTACTGT 60.154 57.895 5.09 0.00 38.78 3.55
6323 7202 0.953960 GGGTGTACTGTTTGGCGAGG 60.954 60.000 0.00 0.00 0.00 4.63
6324 7203 1.574702 GGTGTACTGTTTGGCGAGGC 61.575 60.000 0.00 0.00 0.00 4.70
6328 7207 0.394938 TACTGTTTGGCGAGGCTCAA 59.605 50.000 15.95 0.00 0.00 3.02
6403 7282 2.751479 CGAGAGGGTCCATCTCTAGCTT 60.751 54.545 26.60 0.00 41.23 3.74
6419 7298 9.762933 ATCTCTAGCTTTCTCTTTGATTCATAC 57.237 33.333 0.00 0.00 0.00 2.39
6437 7329 6.220726 TCATACGAGAACCAATTCTGATGA 57.779 37.500 0.00 0.00 45.60 2.92
6482 7374 8.461222 GTGATCATTGTTGTGATTTCCATCTTA 58.539 33.333 0.00 0.00 38.88 2.10
6483 7375 8.461222 TGATCATTGTTGTGATTTCCATCTTAC 58.539 33.333 0.00 0.00 38.88 2.34
6485 7377 8.352137 TCATTGTTGTGATTTCCATCTTACAT 57.648 30.769 0.00 0.00 0.00 2.29
6486 7378 8.245491 TCATTGTTGTGATTTCCATCTTACATG 58.755 33.333 0.00 0.00 0.00 3.21
6499 7391 4.884668 TCTTACATGAAGAAAGGTCGGT 57.115 40.909 0.00 0.00 41.39 4.69
6500 7392 4.566004 TCTTACATGAAGAAAGGTCGGTG 58.434 43.478 0.00 0.00 41.39 4.94
6501 7393 2.185004 ACATGAAGAAAGGTCGGTGG 57.815 50.000 0.00 0.00 0.00 4.61
6502 7394 1.420138 ACATGAAGAAAGGTCGGTGGT 59.580 47.619 0.00 0.00 0.00 4.16
6503 7395 1.806542 CATGAAGAAAGGTCGGTGGTG 59.193 52.381 0.00 0.00 0.00 4.17
6504 7396 0.107831 TGAAGAAAGGTCGGTGGTGG 59.892 55.000 0.00 0.00 0.00 4.61
6505 7397 0.108019 GAAGAAAGGTCGGTGGTGGT 59.892 55.000 0.00 0.00 0.00 4.16
6506 7398 0.549469 AAGAAAGGTCGGTGGTGGTT 59.451 50.000 0.00 0.00 0.00 3.67
6507 7399 1.426751 AGAAAGGTCGGTGGTGGTTA 58.573 50.000 0.00 0.00 0.00 2.85
6508 7400 1.071228 AGAAAGGTCGGTGGTGGTTAC 59.929 52.381 0.00 0.00 0.00 2.50
6509 7401 0.838608 AAAGGTCGGTGGTGGTTACA 59.161 50.000 0.00 0.00 0.00 2.41
6510 7402 1.061546 AAGGTCGGTGGTGGTTACAT 58.938 50.000 0.00 0.00 0.00 2.29
6511 7403 0.611714 AGGTCGGTGGTGGTTACATC 59.388 55.000 0.00 0.00 0.00 3.06
6512 7404 0.611714 GGTCGGTGGTGGTTACATCT 59.388 55.000 0.00 0.00 0.00 2.90
6513 7405 1.674817 GGTCGGTGGTGGTTACATCTG 60.675 57.143 0.00 0.00 0.00 2.90
6514 7406 0.036765 TCGGTGGTGGTTACATCTGC 60.037 55.000 0.00 0.00 0.00 4.26
6515 7407 0.036388 CGGTGGTGGTTACATCTGCT 60.036 55.000 0.00 0.00 0.00 4.24
6516 7408 1.610624 CGGTGGTGGTTACATCTGCTT 60.611 52.381 0.00 0.00 0.00 3.91
6517 7409 2.514803 GGTGGTGGTTACATCTGCTTT 58.485 47.619 0.00 0.00 0.00 3.51
6518 7410 2.488153 GGTGGTGGTTACATCTGCTTTC 59.512 50.000 0.00 0.00 0.00 2.62
6519 7411 2.159627 GTGGTGGTTACATCTGCTTTCG 59.840 50.000 0.00 0.00 0.00 3.46
6520 7412 1.130561 GGTGGTTACATCTGCTTTCGC 59.869 52.381 0.00 0.00 0.00 4.70
6521 7413 1.804151 GTGGTTACATCTGCTTTCGCA 59.196 47.619 0.00 0.00 45.60 5.10
6542 7434 3.964875 CAGTGGCGGCGTTGCTTT 61.965 61.111 9.37 0.00 34.52 3.51
6543 7435 3.660111 AGTGGCGGCGTTGCTTTC 61.660 61.111 9.37 0.00 34.52 2.62
6544 7436 3.959975 GTGGCGGCGTTGCTTTCA 61.960 61.111 9.37 0.00 34.52 2.69
6545 7437 3.659092 TGGCGGCGTTGCTTTCAG 61.659 61.111 9.37 0.00 34.52 3.02
6546 7438 3.660111 GGCGGCGTTGCTTTCAGT 61.660 61.111 9.37 0.00 34.52 3.41
6547 7439 2.322081 GGCGGCGTTGCTTTCAGTA 61.322 57.895 9.37 0.00 34.52 2.74
6548 7440 1.154469 GCGGCGTTGCTTTCAGTAC 60.154 57.895 9.37 0.00 0.00 2.73
6549 7441 1.129809 CGGCGTTGCTTTCAGTACG 59.870 57.895 0.00 0.00 37.09 3.67
6550 7442 1.554042 CGGCGTTGCTTTCAGTACGT 61.554 55.000 0.00 0.00 36.45 3.57
6551 7443 0.584876 GGCGTTGCTTTCAGTACGTT 59.415 50.000 0.00 0.00 36.45 3.99
6552 7444 1.003223 GGCGTTGCTTTCAGTACGTTT 60.003 47.619 0.00 0.00 36.45 3.60
6553 7445 2.034076 GCGTTGCTTTCAGTACGTTTG 58.966 47.619 0.00 0.00 36.45 2.93
6554 7446 2.285950 GCGTTGCTTTCAGTACGTTTGA 60.286 45.455 0.00 0.00 36.45 2.69
6555 7447 3.606153 GCGTTGCTTTCAGTACGTTTGAT 60.606 43.478 0.00 0.00 36.45 2.57
6556 7448 4.523813 CGTTGCTTTCAGTACGTTTGATT 58.476 39.130 0.00 0.00 0.00 2.57
6557 7449 4.967575 CGTTGCTTTCAGTACGTTTGATTT 59.032 37.500 0.00 0.00 0.00 2.17
6558 7450 5.454232 CGTTGCTTTCAGTACGTTTGATTTT 59.546 36.000 0.00 0.00 0.00 1.82
6577 7469 0.888736 TGTTGGGACGTGGATGCAAG 60.889 55.000 0.00 0.00 0.00 4.01
6591 7483 4.009675 GGATGCAAGTCCTGTGTTCATAA 58.990 43.478 0.00 0.00 35.32 1.90
6603 7495 9.573133 GTCCTGTGTTCATAATTTTTCTTATGG 57.427 33.333 4.50 0.00 38.87 2.74
6605 7497 7.981225 CCTGTGTTCATAATTTTTCTTATGGGG 59.019 37.037 4.50 0.00 38.87 4.96
6641 7533 0.749454 CTCCATTGGCAGCCACCTAC 60.749 60.000 15.89 0.00 30.78 3.18
6642 7534 1.207488 TCCATTGGCAGCCACCTACT 61.207 55.000 15.89 0.00 30.78 2.57
6643 7535 0.749454 CCATTGGCAGCCACCTACTC 60.749 60.000 15.89 0.00 30.78 2.59
6644 7536 0.749454 CATTGGCAGCCACCTACTCC 60.749 60.000 15.89 0.00 30.78 3.85
6645 7537 1.926426 ATTGGCAGCCACCTACTCCC 61.926 60.000 15.89 0.00 30.78 4.30
6646 7538 2.689034 GGCAGCCACCTACTCCCT 60.689 66.667 6.55 0.00 0.00 4.20
6647 7539 2.736826 GGCAGCCACCTACTCCCTC 61.737 68.421 6.55 0.00 0.00 4.30
6648 7540 2.736826 GCAGCCACCTACTCCCTCC 61.737 68.421 0.00 0.00 0.00 4.30
6649 7541 2.042843 AGCCACCTACTCCCTCCG 60.043 66.667 0.00 0.00 0.00 4.63
6650 7542 2.363925 GCCACCTACTCCCTCCGT 60.364 66.667 0.00 0.00 0.00 4.69
6651 7543 2.424733 GCCACCTACTCCCTCCGTC 61.425 68.421 0.00 0.00 0.00 4.79
6652 7544 1.757340 CCACCTACTCCCTCCGTCC 60.757 68.421 0.00 0.00 0.00 4.79
6653 7545 1.757340 CACCTACTCCCTCCGTCCC 60.757 68.421 0.00 0.00 0.00 4.46
6654 7546 2.243888 ACCTACTCCCTCCGTCCCA 61.244 63.158 0.00 0.00 0.00 4.37
6655 7547 1.233369 CCTACTCCCTCCGTCCCAT 59.767 63.158 0.00 0.00 0.00 4.00
6656 7548 0.481567 CCTACTCCCTCCGTCCCATA 59.518 60.000 0.00 0.00 0.00 2.74
6657 7549 1.133262 CCTACTCCCTCCGTCCCATAA 60.133 57.143 0.00 0.00 0.00 1.90
6658 7550 2.492940 CCTACTCCCTCCGTCCCATAAT 60.493 54.545 0.00 0.00 0.00 1.28
6659 7551 3.245514 CCTACTCCCTCCGTCCCATAATA 60.246 52.174 0.00 0.00 0.00 0.98
6660 7552 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
6661 7553 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
6662 7554 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
6663 7555 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
6664 7556 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
6665 7557 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
6666 7558 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
6667 7559 5.247564 CCCTCCGTCCCATAATATAAGAACA 59.752 44.000 0.00 0.00 0.00 3.18
6668 7560 6.070194 CCCTCCGTCCCATAATATAAGAACAT 60.070 42.308 0.00 0.00 0.00 2.71
6669 7561 7.394816 CCTCCGTCCCATAATATAAGAACATT 58.605 38.462 0.00 0.00 0.00 2.71
6670 7562 7.883311 CCTCCGTCCCATAATATAAGAACATTT 59.117 37.037 0.00 0.00 0.00 2.32
6671 7563 9.284968 CTCCGTCCCATAATATAAGAACATTTT 57.715 33.333 0.00 0.00 0.00 1.82
6672 7564 9.635404 TCCGTCCCATAATATAAGAACATTTTT 57.365 29.630 0.00 0.00 0.00 1.94
6673 7565 9.677567 CCGTCCCATAATATAAGAACATTTTTG 57.322 33.333 0.00 0.00 0.00 2.44
6709 7601 8.380742 AGTTCTTATATTTTGAGACAGAGGGA 57.619 34.615 0.00 0.00 0.00 4.20
6710 7602 8.482128 AGTTCTTATATTTTGAGACAGAGGGAG 58.518 37.037 0.00 0.00 0.00 4.30
6711 7603 7.979786 TCTTATATTTTGAGACAGAGGGAGT 57.020 36.000 0.00 0.00 0.00 3.85
6712 7604 9.488762 TTCTTATATTTTGAGACAGAGGGAGTA 57.511 33.333 0.00 0.00 0.00 2.59
6715 7607 2.909504 TTGAGACAGAGGGAGTAGCT 57.090 50.000 0.00 0.00 0.00 3.32
6723 7615 4.566987 ACAGAGGGAGTAGCTTTTTAACG 58.433 43.478 0.00 0.00 0.00 3.18
6724 7616 3.933332 CAGAGGGAGTAGCTTTTTAACGG 59.067 47.826 0.00 0.00 0.00 4.44
6732 7624 6.648310 GGAGTAGCTTTTTAACGGAACTACTT 59.352 38.462 0.00 0.00 39.05 2.24
6734 7626 9.196552 GAGTAGCTTTTTAACGGAACTACTTTA 57.803 33.333 0.00 0.00 39.05 1.85
6736 7628 9.750882 GTAGCTTTTTAACGGAACTACTTTATG 57.249 33.333 0.00 0.00 0.00 1.90
6737 7629 8.611654 AGCTTTTTAACGGAACTACTTTATGA 57.388 30.769 0.00 0.00 0.00 2.15
6738 7630 9.059260 AGCTTTTTAACGGAACTACTTTATGAA 57.941 29.630 0.00 0.00 0.00 2.57
6739 7631 9.110617 GCTTTTTAACGGAACTACTTTATGAAC 57.889 33.333 0.00 0.00 0.00 3.18
6740 7632 9.309796 CTTTTTAACGGAACTACTTTATGAACG 57.690 33.333 0.00 0.00 0.00 3.95
6741 7633 7.945033 TTTAACGGAACTACTTTATGAACGT 57.055 32.000 0.00 0.00 0.00 3.99
6743 7635 9.638239 TTTAACGGAACTACTTTATGAACGTAT 57.362 29.630 0.00 0.00 0.00 3.06
6746 7638 9.638239 AACGGAACTACTTTATGAACGTATTAA 57.362 29.630 0.00 0.00 0.00 1.40
6747 7639 9.294030 ACGGAACTACTTTATGAACGTATTAAG 57.706 33.333 0.00 0.00 0.00 1.85
6748 7640 8.749499 CGGAACTACTTTATGAACGTATTAAGG 58.251 37.037 0.00 0.00 0.00 2.69
6749 7641 8.546244 GGAACTACTTTATGAACGTATTAAGGC 58.454 37.037 0.00 0.00 0.00 4.35
6750 7642 9.090692 GAACTACTTTATGAACGTATTAAGGCA 57.909 33.333 0.00 0.00 0.00 4.75
6752 7644 9.609346 ACTACTTTATGAACGTATTAAGGCAAT 57.391 29.630 0.00 0.00 0.00 3.56
6755 7647 8.403236 ACTTTATGAACGTATTAAGGCAATTCC 58.597 33.333 0.00 0.00 0.00 3.01
6795 7808 2.873245 GCTGACAGATTCACAGAAGCCA 60.873 50.000 6.65 0.00 34.07 4.75
6798 7811 2.999355 GACAGATTCACAGAAGCCAGAC 59.001 50.000 0.00 0.00 0.00 3.51
6799 7812 1.998315 CAGATTCACAGAAGCCAGACG 59.002 52.381 0.00 0.00 0.00 4.18
6801 7814 1.996191 GATTCACAGAAGCCAGACGAC 59.004 52.381 0.00 0.00 0.00 4.34
6802 7815 0.033504 TTCACAGAAGCCAGACGACC 59.966 55.000 0.00 0.00 0.00 4.79
6804 7817 0.668706 CACAGAAGCCAGACGACCAG 60.669 60.000 0.00 0.00 0.00 4.00
6805 7818 1.739562 CAGAAGCCAGACGACCAGC 60.740 63.158 0.00 0.00 0.00 4.85
6806 7819 2.210013 AGAAGCCAGACGACCAGCA 61.210 57.895 0.00 0.00 0.00 4.41
6807 7820 1.739562 GAAGCCAGACGACCAGCAG 60.740 63.158 0.00 0.00 0.00 4.24
6813 7826 4.803426 GACGACCAGCAGCCGGAG 62.803 72.222 5.05 0.00 0.00 4.63
6855 7868 0.819582 ACATCCCCAACCTACGTACG 59.180 55.000 15.01 15.01 0.00 3.67
6857 7870 1.205417 CATCCCCAACCTACGTACGTT 59.795 52.381 27.92 5.61 0.00 3.99
6884 7897 4.034975 GCTGCTAGAGATCCACATCAAAAC 59.965 45.833 0.00 0.00 0.00 2.43
6914 7932 0.029834 GCTTTGCCGTATCCTGCATG 59.970 55.000 0.00 0.00 37.33 4.06
6915 7933 0.029834 CTTTGCCGTATCCTGCATGC 59.970 55.000 11.82 11.82 37.33 4.06
6916 7934 0.679321 TTTGCCGTATCCTGCATGCA 60.679 50.000 21.29 21.29 37.33 3.96
6917 7935 1.096967 TTGCCGTATCCTGCATGCAG 61.097 55.000 35.88 35.88 43.26 4.41
6919 7937 2.256591 CCGTATCCTGCATGCAGCC 61.257 63.158 37.11 23.32 44.83 4.85
6920 7938 2.601398 CGTATCCTGCATGCAGCCG 61.601 63.158 37.11 29.05 44.83 5.52
6930 7948 3.266964 TGCAGCCGCACAAGATTC 58.733 55.556 0.00 0.00 45.36 2.52
6931 7949 1.600356 TGCAGCCGCACAAGATTCA 60.600 52.632 0.00 0.00 45.36 2.57
6949 7967 2.475666 AGAAGAAATCTGGCAGCGC 58.524 52.632 10.34 0.00 36.88 5.92
6973 7991 2.124570 CCACCCATGCCCTCTTCG 60.125 66.667 0.00 0.00 0.00 3.79
6982 8000 3.020237 GCCCTCTTCGTCACCTCCC 62.020 68.421 0.00 0.00 0.00 4.30
6984 8002 2.711922 CCTCTTCGTCACCTCCCGG 61.712 68.421 0.00 0.00 0.00 5.73
7026 8044 2.209809 ACCCTGTCCCCATCACCA 59.790 61.111 0.00 0.00 0.00 4.17
7039 8057 1.208052 CATCACCATCTCGACCACCTT 59.792 52.381 0.00 0.00 0.00 3.50
7042 8060 2.100197 CACCATCTCGACCACCTTAGA 58.900 52.381 0.00 0.00 0.00 2.10
7043 8061 2.099921 CACCATCTCGACCACCTTAGAG 59.900 54.545 0.00 0.00 0.00 2.43
7044 8062 1.067821 CCATCTCGACCACCTTAGAGC 59.932 57.143 0.00 0.00 0.00 4.09
7045 8063 1.751351 CATCTCGACCACCTTAGAGCA 59.249 52.381 0.00 0.00 0.00 4.26
7046 8064 1.919240 TCTCGACCACCTTAGAGCAA 58.081 50.000 0.00 0.00 0.00 3.91
7047 8065 1.544691 TCTCGACCACCTTAGAGCAAC 59.455 52.381 0.00 0.00 0.00 4.17
7048 8066 1.546476 CTCGACCACCTTAGAGCAACT 59.454 52.381 0.00 0.00 0.00 3.16
7049 8067 1.544691 TCGACCACCTTAGAGCAACTC 59.455 52.381 0.00 0.00 0.00 3.01
7050 8068 1.546476 CGACCACCTTAGAGCAACTCT 59.454 52.381 2.23 2.23 43.83 3.24
7051 8069 2.753452 CGACCACCTTAGAGCAACTCTA 59.247 50.000 0.16 0.16 41.50 2.43
7052 8070 3.181495 CGACCACCTTAGAGCAACTCTAG 60.181 52.174 4.64 0.00 42.92 2.43
7053 8071 2.498078 ACCACCTTAGAGCAACTCTAGC 59.502 50.000 4.64 0.00 42.92 3.42
7054 8072 2.497675 CCACCTTAGAGCAACTCTAGCA 59.502 50.000 4.64 0.00 42.92 3.49
7055 8073 3.430098 CCACCTTAGAGCAACTCTAGCAG 60.430 52.174 4.64 1.45 42.92 4.24
7056 8074 3.445450 CACCTTAGAGCAACTCTAGCAGA 59.555 47.826 4.64 0.00 42.92 4.26
7057 8075 3.445805 ACCTTAGAGCAACTCTAGCAGAC 59.554 47.826 4.64 0.00 42.92 3.51
7058 8076 3.181480 CCTTAGAGCAACTCTAGCAGACC 60.181 52.174 4.64 0.00 42.92 3.85
7059 8077 1.190643 AGAGCAACTCTAGCAGACCC 58.809 55.000 0.00 0.00 39.28 4.46
7060 8078 1.190643 GAGCAACTCTAGCAGACCCT 58.809 55.000 0.00 0.00 0.00 4.34
7061 8079 0.901124 AGCAACTCTAGCAGACCCTG 59.099 55.000 0.00 0.00 34.12 4.45
7073 8091 3.471495 CAGACCCTGCAAAAATACGAC 57.529 47.619 0.00 0.00 0.00 4.34
7074 8092 2.161609 CAGACCCTGCAAAAATACGACC 59.838 50.000 0.00 0.00 0.00 4.79
7075 8093 1.471287 GACCCTGCAAAAATACGACCC 59.529 52.381 0.00 0.00 0.00 4.46
7076 8094 0.450184 CCCTGCAAAAATACGACCCG 59.550 55.000 0.00 0.00 0.00 5.28
7077 8095 0.179174 CCTGCAAAAATACGACCCGC 60.179 55.000 0.00 0.00 0.00 6.13
7078 8096 0.519519 CTGCAAAAATACGACCCGCA 59.480 50.000 0.00 0.00 0.00 5.69
7079 8097 0.952280 TGCAAAAATACGACCCGCAA 59.048 45.000 0.00 0.00 0.00 4.85
7080 8098 1.337071 TGCAAAAATACGACCCGCAAA 59.663 42.857 0.00 0.00 0.00 3.68
7081 8099 2.223735 TGCAAAAATACGACCCGCAAAA 60.224 40.909 0.00 0.00 0.00 2.44
7082 8100 2.154198 GCAAAAATACGACCCGCAAAAC 59.846 45.455 0.00 0.00 0.00 2.43
7083 8101 2.319241 AAAATACGACCCGCAAAACG 57.681 45.000 0.00 0.00 43.15 3.60
7084 8102 0.110101 AAATACGACCCGCAAAACGC 60.110 50.000 0.00 0.00 41.76 4.84
7107 8125 3.599584 CGGAGAGCAGAACCCGTA 58.400 61.111 0.00 0.00 37.40 4.02
7108 8126 2.116383 CGGAGAGCAGAACCCGTAT 58.884 57.895 0.00 0.00 37.40 3.06
7109 8127 0.030908 CGGAGAGCAGAACCCGTATC 59.969 60.000 0.00 0.00 37.40 2.24
7110 8128 1.404843 GGAGAGCAGAACCCGTATCT 58.595 55.000 0.00 0.00 0.00 1.98
7111 8129 2.584236 GGAGAGCAGAACCCGTATCTA 58.416 52.381 0.00 0.00 0.00 1.98
7112 8130 2.957006 GGAGAGCAGAACCCGTATCTAA 59.043 50.000 0.00 0.00 0.00 2.10
7113 8131 3.383825 GGAGAGCAGAACCCGTATCTAAA 59.616 47.826 0.00 0.00 0.00 1.85
7114 8132 4.361420 GAGAGCAGAACCCGTATCTAAAC 58.639 47.826 0.00 0.00 0.00 2.01
7115 8133 3.132467 AGAGCAGAACCCGTATCTAAACC 59.868 47.826 0.00 0.00 0.00 3.27
7116 8134 3.105283 AGCAGAACCCGTATCTAAACCT 58.895 45.455 0.00 0.00 0.00 3.50
7117 8135 3.118738 AGCAGAACCCGTATCTAAACCTG 60.119 47.826 0.00 0.00 0.00 4.00
7118 8136 3.195661 CAGAACCCGTATCTAAACCTGC 58.804 50.000 0.00 0.00 0.00 4.85
7119 8137 2.835764 AGAACCCGTATCTAAACCTGCA 59.164 45.455 0.00 0.00 0.00 4.41
7120 8138 3.454812 AGAACCCGTATCTAAACCTGCAT 59.545 43.478 0.00 0.00 0.00 3.96
7121 8139 4.652421 AGAACCCGTATCTAAACCTGCATA 59.348 41.667 0.00 0.00 0.00 3.14
7122 8140 5.307196 AGAACCCGTATCTAAACCTGCATAT 59.693 40.000 0.00 0.00 0.00 1.78
7123 8141 5.562298 ACCCGTATCTAAACCTGCATATT 57.438 39.130 0.00 0.00 0.00 1.28
7124 8142 5.937111 ACCCGTATCTAAACCTGCATATTT 58.063 37.500 0.00 0.00 0.00 1.40
7125 8143 6.362248 ACCCGTATCTAAACCTGCATATTTT 58.638 36.000 1.09 0.00 0.00 1.82
7126 8144 6.262273 ACCCGTATCTAAACCTGCATATTTTG 59.738 38.462 1.09 0.46 0.00 2.44
7127 8145 6.485313 CCCGTATCTAAACCTGCATATTTTGA 59.515 38.462 8.60 8.60 0.00 2.69
7128 8146 7.012894 CCCGTATCTAAACCTGCATATTTTGAA 59.987 37.037 9.74 1.03 0.00 2.69
7129 8147 8.402472 CCGTATCTAAACCTGCATATTTTGAAA 58.598 33.333 9.74 0.00 0.00 2.69
7130 8148 9.781834 CGTATCTAAACCTGCATATTTTGAAAA 57.218 29.630 9.74 0.00 0.00 2.29
7150 8168 5.638596 AAAAATACTTTCGCGGGAGAAAT 57.361 34.783 6.13 1.82 39.13 2.17
7151 8169 5.638596 AAAATACTTTCGCGGGAGAAATT 57.361 34.783 6.13 7.54 39.13 1.82
7152 8170 4.616181 AATACTTTCGCGGGAGAAATTG 57.384 40.909 6.13 0.00 39.13 2.32
7153 8171 0.521735 ACTTTCGCGGGAGAAATTGC 59.478 50.000 6.13 0.00 39.13 3.56
7154 8172 0.521291 CTTTCGCGGGAGAAATTGCA 59.479 50.000 6.13 0.00 39.13 4.08
7155 8173 0.239879 TTTCGCGGGAGAAATTGCAC 59.760 50.000 6.13 0.00 35.44 4.57
7156 8174 0.886938 TTCGCGGGAGAAATTGCACA 60.887 50.000 6.13 0.00 0.00 4.57
7157 8175 0.886938 TCGCGGGAGAAATTGCACAA 60.887 50.000 6.13 0.00 0.00 3.33
7158 8176 0.039617 CGCGGGAGAAATTGCACAAA 60.040 50.000 0.00 0.00 0.00 2.83
7159 8177 1.418373 GCGGGAGAAATTGCACAAAC 58.582 50.000 0.00 0.00 0.00 2.93
7160 8178 1.269517 GCGGGAGAAATTGCACAAACA 60.270 47.619 0.00 0.00 0.00 2.83
7161 8179 2.610232 GCGGGAGAAATTGCACAAACAT 60.610 45.455 0.00 0.00 0.00 2.71
7162 8180 3.366883 GCGGGAGAAATTGCACAAACATA 60.367 43.478 0.00 0.00 0.00 2.29
7163 8181 4.414852 CGGGAGAAATTGCACAAACATAG 58.585 43.478 0.00 0.00 0.00 2.23
7164 8182 4.082787 CGGGAGAAATTGCACAAACATAGT 60.083 41.667 0.00 0.00 0.00 2.12
7165 8183 5.564651 CGGGAGAAATTGCACAAACATAGTT 60.565 40.000 0.00 0.00 0.00 2.24
7166 8184 5.863935 GGGAGAAATTGCACAAACATAGTTC 59.136 40.000 0.00 0.00 0.00 3.01
7167 8185 6.446318 GGAGAAATTGCACAAACATAGTTCA 58.554 36.000 0.00 0.00 0.00 3.18
7168 8186 7.092716 GGAGAAATTGCACAAACATAGTTCAT 58.907 34.615 0.00 0.00 0.00 2.57
7169 8187 7.274250 GGAGAAATTGCACAAACATAGTTCATC 59.726 37.037 0.00 0.00 0.00 2.92
7170 8188 7.660112 AGAAATTGCACAAACATAGTTCATCA 58.340 30.769 0.00 0.00 0.00 3.07
7171 8189 7.596248 AGAAATTGCACAAACATAGTTCATCAC 59.404 33.333 0.00 0.00 0.00 3.06
7172 8190 5.764487 TTGCACAAACATAGTTCATCACA 57.236 34.783 0.00 0.00 0.00 3.58
7173 8191 5.963176 TGCACAAACATAGTTCATCACAT 57.037 34.783 0.00 0.00 0.00 3.21
7174 8192 7.446001 TTGCACAAACATAGTTCATCACATA 57.554 32.000 0.00 0.00 0.00 2.29
7175 8193 6.841119 TGCACAAACATAGTTCATCACATAC 58.159 36.000 0.00 0.00 0.00 2.39
7176 8194 6.654582 TGCACAAACATAGTTCATCACATACT 59.345 34.615 0.00 0.00 0.00 2.12
7177 8195 7.821846 TGCACAAACATAGTTCATCACATACTA 59.178 33.333 0.00 0.00 0.00 1.82
7178 8196 8.116753 GCACAAACATAGTTCATCACATACTAC 58.883 37.037 0.00 0.00 0.00 2.73
7179 8197 9.150348 CACAAACATAGTTCATCACATACTACA 57.850 33.333 0.00 0.00 0.00 2.74
7180 8198 9.890629 ACAAACATAGTTCATCACATACTACAT 57.109 29.630 0.00 0.00 0.00 2.29
7211 8229 7.920160 TCACATGATCAACAAACTATAAGCA 57.080 32.000 0.00 0.00 0.00 3.91
7212 8230 8.510243 TCACATGATCAACAAACTATAAGCAT 57.490 30.769 0.00 0.00 0.00 3.79
7213 8231 9.612066 TCACATGATCAACAAACTATAAGCATA 57.388 29.630 0.00 0.00 0.00 3.14
7214 8232 9.874215 CACATGATCAACAAACTATAAGCATAG 57.126 33.333 0.00 0.00 40.14 2.23
7215 8233 8.562892 ACATGATCAACAAACTATAAGCATAGC 58.437 33.333 0.00 0.00 38.17 2.97
7216 8234 8.781196 CATGATCAACAAACTATAAGCATAGCT 58.219 33.333 0.00 0.00 42.56 3.32
7232 8250 8.789825 AAGCATAGCTATACTACATACTACGT 57.210 34.615 5.77 0.00 38.25 3.57
7233 8251 8.789825 AGCATAGCTATACTACATACTACGTT 57.210 34.615 5.77 0.00 36.99 3.99
7234 8252 9.881649 AGCATAGCTATACTACATACTACGTTA 57.118 33.333 5.77 0.00 36.99 3.18
7248 8266 9.331282 ACATACTACGTTAAACTAGTACTAGGG 57.669 37.037 29.05 15.07 37.49 3.53
7249 8267 8.778358 CATACTACGTTAAACTAGTACTAGGGG 58.222 40.741 29.05 15.35 37.49 4.79
7250 8268 6.122964 ACTACGTTAAACTAGTACTAGGGGG 58.877 44.000 29.05 15.93 37.49 5.40
7251 8269 4.935578 ACGTTAAACTAGTACTAGGGGGT 58.064 43.478 29.05 16.45 37.49 4.95
7252 8270 4.950475 ACGTTAAACTAGTACTAGGGGGTC 59.050 45.833 29.05 16.71 37.49 4.46
7253 8271 4.035675 CGTTAAACTAGTACTAGGGGGTCG 59.964 50.000 29.05 22.42 37.49 4.79
7254 8272 2.744352 AACTAGTACTAGGGGGTCGG 57.256 55.000 29.05 7.31 37.49 4.79
7255 8273 1.898863 ACTAGTACTAGGGGGTCGGA 58.101 55.000 29.05 0.00 37.49 4.55
7256 8274 2.426844 ACTAGTACTAGGGGGTCGGAT 58.573 52.381 29.05 6.48 37.49 4.18
7257 8275 2.374839 ACTAGTACTAGGGGGTCGGATC 59.625 54.545 29.05 0.00 37.49 3.36
7258 8276 1.532038 AGTACTAGGGGGTCGGATCT 58.468 55.000 0.00 0.00 0.00 2.75
7259 8277 1.145325 AGTACTAGGGGGTCGGATCTG 59.855 57.143 0.00 0.00 0.00 2.90
7260 8278 1.144503 GTACTAGGGGGTCGGATCTGA 59.855 57.143 0.00 0.00 0.00 3.27
7261 8279 0.106116 ACTAGGGGGTCGGATCTGAC 60.106 60.000 24.13 24.13 38.17 3.51
7262 8280 1.152819 TAGGGGGTCGGATCTGACG 60.153 63.158 24.89 6.08 39.83 4.35
7263 8281 2.635787 TAGGGGGTCGGATCTGACGG 62.636 65.000 24.89 0.00 39.83 4.79
7264 8282 4.222847 GGGGTCGGATCTGACGGC 62.223 72.222 24.89 14.01 39.83 5.68
7265 8283 4.570663 GGGTCGGATCTGACGGCG 62.571 72.222 24.89 4.80 39.83 6.46
7266 8284 4.570663 GGTCGGATCTGACGGCGG 62.571 72.222 24.89 0.00 39.83 6.13
7270 8288 4.933064 GGATCTGACGGCGGCGAG 62.933 72.222 38.93 25.22 0.00 5.03
7271 8289 4.933064 GATCTGACGGCGGCGAGG 62.933 72.222 38.93 24.39 0.00 4.63
7284 8302 3.777925 CGAGGTCGCGGCAAACTG 61.778 66.667 14.93 0.00 0.00 3.16
7285 8303 3.423154 GAGGTCGCGGCAAACTGG 61.423 66.667 14.93 0.00 0.00 4.00
7286 8304 3.876589 GAGGTCGCGGCAAACTGGA 62.877 63.158 14.93 0.00 0.00 3.86
7287 8305 3.723348 GGTCGCGGCAAACTGGAC 61.723 66.667 14.93 0.00 0.00 4.02
7288 8306 4.072088 GTCGCGGCAAACTGGACG 62.072 66.667 5.47 0.00 43.80 4.79
7289 8307 4.287781 TCGCGGCAAACTGGACGA 62.288 61.111 6.13 0.00 43.61 4.20
7290 8308 4.072088 CGCGGCAAACTGGACGAC 62.072 66.667 0.00 0.00 43.61 4.34
7291 8309 4.072088 GCGGCAAACTGGACGACG 62.072 66.667 0.00 0.00 43.61 5.12
7292 8310 2.660552 CGGCAAACTGGACGACGT 60.661 61.111 0.00 0.00 43.61 4.34
7293 8311 2.654912 CGGCAAACTGGACGACGTC 61.655 63.158 19.70 19.70 43.61 4.34
7294 8312 2.654912 GGCAAACTGGACGACGTCG 61.655 63.158 34.58 34.58 46.33 5.12
7304 8322 4.477975 CGACGTCGTGGAGGAGCC 62.478 72.222 29.08 0.00 34.11 4.70
7305 8323 4.477975 GACGTCGTGGAGGAGCCG 62.478 72.222 0.63 0.00 40.66 5.52
7308 8326 4.131088 GTCGTGGAGGAGCCGGAC 62.131 72.222 5.05 0.00 40.66 4.79
7319 8337 2.586357 GCCGGACGCTCAATCCTC 60.586 66.667 5.05 0.00 33.70 3.71
7320 8338 2.107141 CCGGACGCTCAATCCTCC 59.893 66.667 0.00 0.00 33.70 4.30
7321 8339 2.427245 CCGGACGCTCAATCCTCCT 61.427 63.158 0.00 0.00 33.70 3.69
7322 8340 1.066587 CGGACGCTCAATCCTCCTC 59.933 63.158 0.00 0.00 33.70 3.71
7323 8341 1.066587 GGACGCTCAATCCTCCTCG 59.933 63.158 0.00 0.00 33.03 4.63
7324 8342 1.590259 GACGCTCAATCCTCCTCGC 60.590 63.158 0.00 0.00 0.00 5.03
7325 8343 2.279784 CGCTCAATCCTCCTCGCC 60.280 66.667 0.00 0.00 0.00 5.54
7326 8344 2.279784 GCTCAATCCTCCTCGCCG 60.280 66.667 0.00 0.00 0.00 6.46
7327 8345 2.419198 CTCAATCCTCCTCGCCGG 59.581 66.667 0.00 0.00 0.00 6.13
7328 8346 2.043349 TCAATCCTCCTCGCCGGA 60.043 61.111 5.05 0.00 40.30 5.14
7336 8354 3.916544 CCTCGCCGGAGCTGCATA 61.917 66.667 5.05 0.00 39.06 3.14
7337 8355 2.355599 CTCGCCGGAGCTGCATAG 60.356 66.667 5.05 0.00 36.60 2.23
7338 8356 2.833121 TCGCCGGAGCTGCATAGA 60.833 61.111 5.05 0.00 36.60 1.98
7339 8357 2.152297 CTCGCCGGAGCTGCATAGAT 62.152 60.000 5.05 0.00 36.60 1.98
7340 8358 1.735920 CGCCGGAGCTGCATAGATC 60.736 63.158 5.05 0.00 38.61 2.75
7341 8359 1.735920 GCCGGAGCTGCATAGATCG 60.736 63.158 5.05 0.00 40.22 3.69
7342 8360 1.959848 CCGGAGCTGCATAGATCGA 59.040 57.895 5.91 0.00 40.22 3.59
7343 8361 0.387878 CCGGAGCTGCATAGATCGAC 60.388 60.000 5.91 0.00 40.22 4.20
7344 8362 0.727457 CGGAGCTGCATAGATCGACG 60.727 60.000 5.91 0.00 40.22 5.12
7345 8363 0.312416 GGAGCTGCATAGATCGACGT 59.688 55.000 0.00 0.00 40.22 4.34
7346 8364 1.535896 GGAGCTGCATAGATCGACGTA 59.464 52.381 0.00 0.00 40.22 3.57
7347 8365 2.576406 GAGCTGCATAGATCGACGTAC 58.424 52.381 1.02 0.00 28.51 3.67
7348 8366 2.222886 AGCTGCATAGATCGACGTACT 58.777 47.619 1.02 0.00 0.00 2.73
7349 8367 2.619177 AGCTGCATAGATCGACGTACTT 59.381 45.455 1.02 0.00 0.00 2.24
7350 8368 2.974536 GCTGCATAGATCGACGTACTTC 59.025 50.000 0.00 0.00 0.00 3.01
7351 8369 3.304123 GCTGCATAGATCGACGTACTTCT 60.304 47.826 0.00 0.00 0.00 2.85
7352 8370 4.459606 CTGCATAGATCGACGTACTTCTC 58.540 47.826 0.00 0.00 0.00 2.87
7353 8371 3.250280 TGCATAGATCGACGTACTTCTCC 59.750 47.826 0.00 0.00 0.00 3.71
7354 8372 3.664798 GCATAGATCGACGTACTTCTCCG 60.665 52.174 0.00 0.00 0.00 4.63
7355 8373 0.656785 AGATCGACGTACTTCTCCGC 59.343 55.000 0.00 0.00 0.00 5.54
7356 8374 0.316854 GATCGACGTACTTCTCCGCC 60.317 60.000 0.00 0.00 0.00 6.13
7357 8375 0.747283 ATCGACGTACTTCTCCGCCT 60.747 55.000 0.00 0.00 0.00 5.52
7358 8376 0.108186 TCGACGTACTTCTCCGCCTA 60.108 55.000 0.00 0.00 0.00 3.93
7359 8377 0.027324 CGACGTACTTCTCCGCCTAC 59.973 60.000 0.00 0.00 0.00 3.18
7360 8378 1.377536 GACGTACTTCTCCGCCTACT 58.622 55.000 0.00 0.00 0.00 2.57
7361 8379 1.330213 GACGTACTTCTCCGCCTACTC 59.670 57.143 0.00 0.00 0.00 2.59
7362 8380 0.662085 CGTACTTCTCCGCCTACTCC 59.338 60.000 0.00 0.00 0.00 3.85
7363 8381 0.662085 GTACTTCTCCGCCTACTCCG 59.338 60.000 0.00 0.00 0.00 4.63
7364 8382 1.099879 TACTTCTCCGCCTACTCCGC 61.100 60.000 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.623889 CCTGTAGGGTCTTAGATGACGG 59.376 54.545 0.00 0.00 37.81 4.79
43 45 1.000019 TGCGCTAGTCCTGTAGGGT 60.000 57.895 9.73 0.00 35.81 4.34
80 82 4.917998 TCGATATACGCTTCTCTTCATTGC 59.082 41.667 0.00 0.00 42.26 3.56
100 102 4.641541 TGTCTACGGGTTAGATCATTTCGA 59.358 41.667 0.00 0.00 39.13 3.71
106 108 3.758023 TCGTTTGTCTACGGGTTAGATCA 59.242 43.478 0.00 0.00 39.13 2.92
124 126 4.483311 GTCTTCGTTCCTTAGTGATCGTT 58.517 43.478 0.00 0.00 0.00 3.85
129 131 1.542915 CCGGTCTTCGTTCCTTAGTGA 59.457 52.381 0.00 0.00 37.11 3.41
134 136 1.263356 TGATCCGGTCTTCGTTCCTT 58.737 50.000 0.00 0.00 37.11 3.36
136 138 1.337447 TGTTGATCCGGTCTTCGTTCC 60.337 52.381 0.00 0.00 37.11 3.62
140 142 1.134818 TCCATGTTGATCCGGTCTTCG 60.135 52.381 0.00 0.00 38.88 3.79
176 178 1.464429 CTCGCGAGATTTGGTCGTCG 61.464 60.000 32.06 0.00 40.84 5.12
178 180 0.456221 ATCTCGCGAGATTTGGTCGT 59.544 50.000 38.97 20.62 45.31 4.34
198 200 1.005394 GGAGGTTTGTCTTCGGCGA 60.005 57.895 4.99 4.99 0.00 5.54
203 205 1.541588 GGCATGTGGAGGTTTGTCTTC 59.458 52.381 0.00 0.00 0.00 2.87
204 206 1.620822 GGCATGTGGAGGTTTGTCTT 58.379 50.000 0.00 0.00 0.00 3.01
216 218 1.996786 GCATCGTTGGAGGGCATGTG 61.997 60.000 0.00 0.00 0.00 3.21
246 248 1.792301 GTTAAGCCCTCGTTTCGGC 59.208 57.895 0.00 0.00 46.09 5.54
253 255 1.610554 TTCCCTCCGTTAAGCCCTCG 61.611 60.000 0.00 0.00 0.00 4.63
254 256 0.107800 GTTCCCTCCGTTAAGCCCTC 60.108 60.000 0.00 0.00 0.00 4.30
255 257 1.559965 GGTTCCCTCCGTTAAGCCCT 61.560 60.000 0.00 0.00 0.00 5.19
258 260 3.555527 ATAAGGTTCCCTCCGTTAAGC 57.444 47.619 0.00 0.00 30.89 3.09
259 261 4.080751 TGGAATAAGGTTCCCTCCGTTAAG 60.081 45.833 4.50 0.00 37.79 1.85
260 262 3.845398 TGGAATAAGGTTCCCTCCGTTAA 59.155 43.478 4.50 0.00 37.79 2.01
263 265 1.961133 TGGAATAAGGTTCCCTCCGT 58.039 50.000 4.50 0.00 37.79 4.69
264 266 2.706190 AGATGGAATAAGGTTCCCTCCG 59.294 50.000 4.50 0.00 37.79 4.63
265 267 4.262506 CGTAGATGGAATAAGGTTCCCTCC 60.263 50.000 4.50 0.00 37.79 4.30
266 268 4.587684 TCGTAGATGGAATAAGGTTCCCTC 59.412 45.833 4.50 4.52 37.79 4.30
267 269 4.553678 TCGTAGATGGAATAAGGTTCCCT 58.446 43.478 4.50 0.00 37.79 4.20
302 305 0.248990 CATGCTCAGAGAGACGAGGC 60.249 60.000 0.00 0.00 0.00 4.70
306 309 1.200948 TGTGTCATGCTCAGAGAGACG 59.799 52.381 0.00 0.00 32.08 4.18
314 317 3.146066 GTTAGGGTTTGTGTCATGCTCA 58.854 45.455 0.00 0.00 0.00 4.26
320 323 5.923733 ATGTTTTGTTAGGGTTTGTGTCA 57.076 34.783 0.00 0.00 0.00 3.58
343 346 8.568794 GGAGTGCTTTGTTTTCTACTTTATTCT 58.431 33.333 0.00 0.00 0.00 2.40
344 347 7.808381 GGGAGTGCTTTGTTTTCTACTTTATTC 59.192 37.037 0.00 0.00 0.00 1.75
347 350 6.362248 AGGGAGTGCTTTGTTTTCTACTTTA 58.638 36.000 0.00 0.00 0.00 1.85
350 353 4.439253 AGGGAGTGCTTTGTTTTCTACT 57.561 40.909 0.00 0.00 0.00 2.57
351 354 5.281727 CAAAGGGAGTGCTTTGTTTTCTAC 58.718 41.667 0.00 0.00 36.24 2.59
352 355 4.340950 CCAAAGGGAGTGCTTTGTTTTCTA 59.659 41.667 0.00 0.00 38.48 2.10
353 356 3.132824 CCAAAGGGAGTGCTTTGTTTTCT 59.867 43.478 0.00 0.00 38.48 2.52
354 357 3.457234 CCAAAGGGAGTGCTTTGTTTTC 58.543 45.455 0.00 0.00 38.48 2.29
356 359 1.138859 GCCAAAGGGAGTGCTTTGTTT 59.861 47.619 0.00 0.00 38.48 2.83
359 362 0.752054 TTGCCAAAGGGAGTGCTTTG 59.248 50.000 0.00 0.00 39.49 2.77
361 364 1.413812 CTTTTGCCAAAGGGAGTGCTT 59.586 47.619 2.32 0.00 36.48 3.91
363 366 0.601046 GCTTTTGCCAAAGGGAGTGC 60.601 55.000 11.85 0.00 40.03 4.40
364 367 3.593834 GCTTTTGCCAAAGGGAGTG 57.406 52.632 11.85 0.00 40.03 3.51
386 392 2.842462 ATGGAGGCGCGGTGGATA 60.842 61.111 8.83 0.00 0.00 2.59
406 412 4.335416 CTCATCTTTTGTGGCCTTTAGGA 58.665 43.478 3.32 0.00 37.39 2.94
466 472 2.825075 TAGACGCCACCGGTGCTCTA 62.825 60.000 29.75 24.87 36.54 2.43
471 477 2.939261 AACCTAGACGCCACCGGTG 61.939 63.158 28.26 28.26 39.22 4.94
472 478 2.602568 AACCTAGACGCCACCGGT 60.603 61.111 0.00 0.00 39.22 5.28
482 488 2.058595 GCCGCCTCCTCAACCTAGA 61.059 63.158 0.00 0.00 0.00 2.43
539 545 8.816640 AAATTCAATCTGGTCACAATACAAAC 57.183 30.769 0.00 0.00 0.00 2.93
568 574 8.370940 TGTTTTGGCCATGAGATTTGTTTAATA 58.629 29.630 6.09 0.00 0.00 0.98
569 575 7.222872 TGTTTTGGCCATGAGATTTGTTTAAT 58.777 30.769 6.09 0.00 0.00 1.40
570 576 6.586344 TGTTTTGGCCATGAGATTTGTTTAA 58.414 32.000 6.09 0.00 0.00 1.52
571 577 6.166984 TGTTTTGGCCATGAGATTTGTTTA 57.833 33.333 6.09 0.00 0.00 2.01
586 592 5.123027 TCCAAACAAAAGTCAATGTTTTGGC 59.877 36.000 11.86 0.00 44.91 4.52
636 642 1.894466 TGGATTGGTCAATGTTGGCTG 59.106 47.619 0.43 0.00 32.28 4.85
749 763 2.241176 TGGTTTTCTGTGTCAAGGGTCT 59.759 45.455 0.00 0.00 0.00 3.85
753 767 4.448537 TGTTTGGTTTTCTGTGTCAAGG 57.551 40.909 0.00 0.00 0.00 3.61
764 778 4.158949 GGTTCGGGCTATATGTTTGGTTTT 59.841 41.667 0.00 0.00 0.00 2.43
829 843 3.399181 GGACCCTGGATCGGCACA 61.399 66.667 0.00 0.00 0.00 4.57
830 844 3.391665 CTGGACCCTGGATCGGCAC 62.392 68.421 0.00 0.00 0.00 5.01
1011 1029 0.967887 TGTTGTTGGTGGTGGTGGTG 60.968 55.000 0.00 0.00 0.00 4.17
1012 1030 0.251832 TTGTTGTTGGTGGTGGTGGT 60.252 50.000 0.00 0.00 0.00 4.16
1013 1031 0.898320 TTTGTTGTTGGTGGTGGTGG 59.102 50.000 0.00 0.00 0.00 4.61
1089 1107 0.600255 GTAGTCGGAATCCATGGCCG 60.600 60.000 19.87 19.87 46.08 6.13
1144 1162 2.787567 GGGCTGGTAGAGAGTCCGC 61.788 68.421 0.00 0.00 0.00 5.54
1265 1283 4.181010 AATGCGGGATCTGGCGCT 62.181 61.111 7.64 0.00 0.00 5.92
1373 1393 0.596082 TCGCGTCAGATCAGTGACAA 59.404 50.000 5.77 0.00 46.19 3.18
1417 1437 2.760374 GTCGACCATGAATCAGATCCC 58.240 52.381 3.51 0.00 0.00 3.85
1465 1485 1.516365 GAGGCATCTACGCTAGCGGA 61.516 60.000 37.66 31.12 44.69 5.54
1541 1561 2.542766 AAACACAAGCACGACAACTG 57.457 45.000 0.00 0.00 0.00 3.16
1547 1567 2.952978 ACCCATAAAAACACAAGCACGA 59.047 40.909 0.00 0.00 0.00 4.35
1548 1568 3.049206 CACCCATAAAAACACAAGCACG 58.951 45.455 0.00 0.00 0.00 5.34
1552 1572 5.278758 CCACTACCACCCATAAAAACACAAG 60.279 44.000 0.00 0.00 0.00 3.16
1558 1578 4.106663 ACCTTCCACTACCACCCATAAAAA 59.893 41.667 0.00 0.00 0.00 1.94
1624 1647 6.827586 AGTCAACCTAAAGTCAACAAAACA 57.172 33.333 0.00 0.00 0.00 2.83
1638 1661 4.301072 AAGCAATTGCCTAGTCAACCTA 57.699 40.909 26.45 0.00 43.38 3.08
1712 1736 3.311106 GCACACACAACCATGAATTCAG 58.689 45.455 14.54 3.71 0.00 3.02
1733 1757 4.827087 AGAGCCATCCACAGCGCG 62.827 66.667 0.00 0.00 33.66 6.86
1735 1759 3.200593 GCAGAGCCATCCACAGCG 61.201 66.667 0.00 0.00 0.00 5.18
1838 1868 0.815213 GGCTGATTACATGAGCGCCA 60.815 55.000 2.29 1.52 34.09 5.69
1850 1880 1.227556 GGGATACGCGTGGCTGATT 60.228 57.895 24.59 0.00 37.60 2.57
1865 1895 2.608059 TGCCCGTATGTGTGGGGA 60.608 61.111 0.00 0.00 46.12 4.81
1910 1940 5.500234 ACTTTAGCATCAGGAACATTAGCA 58.500 37.500 0.00 0.00 0.00 3.49
2004 2148 5.446607 GCAAGAGAGCTCGAAGTAAATTTCC 60.447 44.000 8.37 0.00 34.09 3.13
2116 2274 2.158564 CCATATGACATTGTGGCCTCCT 60.159 50.000 3.32 0.00 0.00 3.69
2288 2446 6.312672 GTGCAAACAAAAAGACACCAAAGTAT 59.687 34.615 0.00 0.00 0.00 2.12
2320 2479 8.695284 GTTCACGCTATGTTAGATTGATCTTAG 58.305 37.037 0.00 0.00 38.32 2.18
2330 2489 5.066968 TGATGTGTTCACGCTATGTTAGA 57.933 39.130 0.00 0.00 0.00 2.10
2340 2499 9.265938 CTAAACATTTAGAATGATGTGTTCACG 57.734 33.333 5.60 0.00 42.05 4.35
2360 2519 7.920160 TTATCACTGCATTCATGACTAAACA 57.080 32.000 0.00 0.00 0.00 2.83
2366 2525 8.320396 AGTATCATTATCACTGCATTCATGAC 57.680 34.615 0.00 0.00 0.00 3.06
2384 2543 7.816031 TCGTTCGGAGAAACTTTTAAGTATCAT 59.184 33.333 0.00 0.00 45.90 2.45
2393 2552 8.246180 TGTAGTATATCGTTCGGAGAAACTTTT 58.754 33.333 0.00 0.00 45.90 2.27
2425 2584 8.408601 CAGACATAAAACAAATTATCTGAGGGG 58.591 37.037 0.00 0.00 0.00 4.79
3243 3504 6.868339 CCACAAGATATGATTATGCACTACGA 59.132 38.462 0.00 0.00 0.00 3.43
3294 3555 6.572314 GCAAGCTGGGAAAACAATTACATAGT 60.572 38.462 0.00 0.00 0.00 2.12
3382 3728 2.416547 CAGTATGCAAGTTCAGGAACCG 59.583 50.000 8.47 2.24 42.06 4.44
3498 3846 9.282247 CATGACAAGAAAGTATGACAAAATAGC 57.718 33.333 0.00 0.00 0.00 2.97
3636 3984 4.078571 ACCCTATATGTGGACCTCAGAAGA 60.079 45.833 2.23 0.00 0.00 2.87
3788 4136 7.455323 AGCCTTCTAGGGAATCTAAGTATTACC 59.545 40.741 0.00 0.00 39.81 2.85
4409 5077 8.204836 GGGAAACTGTTATTTATCTCAGAGCTA 58.795 37.037 0.00 0.00 0.00 3.32
4492 5161 3.119245 ACAGCCATCATCAGTGAAATTGC 60.119 43.478 0.00 2.01 38.01 3.56
4496 5165 3.503363 GTCAACAGCCATCATCAGTGAAA 59.497 43.478 0.00 0.00 38.01 2.69
4509 5178 6.404734 CCATTAATTTCCTACAGTCAACAGCC 60.405 42.308 0.00 0.00 0.00 4.85
4583 5252 1.699054 ATAGCGCAGATGCCCAAGGA 61.699 55.000 11.47 0.00 37.91 3.36
4949 5641 4.588528 ACATCCAATTAAACTGGCAGTTGT 59.411 37.500 31.75 22.43 38.66 3.32
4972 5664 1.110442 CTTGTGGCACCAAAACTGGA 58.890 50.000 16.26 0.00 0.00 3.86
5205 5905 2.270352 ACCTGAAATCAACCGCTCAA 57.730 45.000 0.00 0.00 0.00 3.02
5211 5911 2.820197 GTCCCAGAACCTGAAATCAACC 59.180 50.000 0.00 0.00 32.44 3.77
5403 6104 6.239629 GCATTCCCTTTACCAGCTACTACTAT 60.240 42.308 0.00 0.00 0.00 2.12
5448 6149 3.201290 GGTCATCATGGACTGATCACAC 58.799 50.000 0.00 0.00 42.91 3.82
5476 6177 3.717294 AGGGCCACGTGACCATCC 61.717 66.667 23.02 12.73 0.00 3.51
5535 6236 3.884895 TGCTTTTCCTCTCAAGTCAACA 58.115 40.909 0.00 0.00 0.00 3.33
5616 6319 5.013287 TCCTTGGCAAACATGGTTACTAGTA 59.987 40.000 0.00 0.00 43.18 1.82
5648 6351 8.433421 AAAACTAACAGACGAAGAAGAATTGA 57.567 30.769 0.00 0.00 0.00 2.57
5651 6354 9.706691 TCATAAAACTAACAGACGAAGAAGAAT 57.293 29.630 0.00 0.00 0.00 2.40
5652 6355 9.706691 ATCATAAAACTAACAGACGAAGAAGAA 57.293 29.630 0.00 0.00 0.00 2.52
5915 6791 4.920927 GCCTCGAGCTAAGATCTTATTGAC 59.079 45.833 15.47 6.30 38.99 3.18
5966 6842 4.516698 ACATCACGAAGCAGAATCTTGTTT 59.483 37.500 0.00 0.00 0.00 2.83
6041 6917 0.250234 CCGCCTTGAGAACATCCTGA 59.750 55.000 0.00 0.00 0.00 3.86
6116 6992 4.675303 AGTGGGGGCTGGCCAGTA 62.675 66.667 32.81 12.47 37.98 2.74
6183 7062 5.232610 CATCAGATGGAGCAAAAGAGAAC 57.767 43.478 1.95 0.00 0.00 3.01
6204 7083 1.001974 CACTGTCTCGAATCCCAACCA 59.998 52.381 0.00 0.00 0.00 3.67
6314 7193 0.179032 TCAAGTTGAGCCTCGCCAAA 60.179 50.000 0.08 0.00 0.00 3.28
6328 7207 9.398170 CGACAGTTTGATCAAAATTATTCAAGT 57.602 29.630 22.07 12.86 31.33 3.16
6382 7261 1.202879 AGCTAGAGATGGACCCTCTCG 60.203 57.143 17.98 8.63 43.19 4.04
6403 7282 6.697395 TGGTTCTCGTATGAATCAAAGAGAA 58.303 36.000 17.79 17.79 40.89 2.87
6419 7298 6.486253 TTTTCTCATCAGAATTGGTTCTCG 57.514 37.500 0.00 0.00 42.73 4.04
6437 7329 0.319469 CGGCCGCCATTTGTTTTTCT 60.319 50.000 14.67 0.00 0.00 2.52
6482 7374 1.420138 ACCACCGACCTTTCTTCATGT 59.580 47.619 0.00 0.00 0.00 3.21
6483 7375 1.806542 CACCACCGACCTTTCTTCATG 59.193 52.381 0.00 0.00 0.00 3.07
6485 7377 0.107831 CCACCACCGACCTTTCTTCA 59.892 55.000 0.00 0.00 0.00 3.02
6486 7378 0.108019 ACCACCACCGACCTTTCTTC 59.892 55.000 0.00 0.00 0.00 2.87
6490 7382 0.838608 TGTAACCACCACCGACCTTT 59.161 50.000 0.00 0.00 0.00 3.11
6491 7383 1.002773 GATGTAACCACCACCGACCTT 59.997 52.381 0.00 0.00 0.00 3.50
6492 7384 0.611714 GATGTAACCACCACCGACCT 59.388 55.000 0.00 0.00 0.00 3.85
6493 7385 0.611714 AGATGTAACCACCACCGACC 59.388 55.000 0.00 0.00 0.00 4.79
6494 7386 1.722011 CAGATGTAACCACCACCGAC 58.278 55.000 0.00 0.00 0.00 4.79
6495 7387 0.036765 GCAGATGTAACCACCACCGA 60.037 55.000 0.00 0.00 0.00 4.69
6496 7388 0.036388 AGCAGATGTAACCACCACCG 60.036 55.000 0.00 0.00 0.00 4.94
6497 7389 2.200373 AAGCAGATGTAACCACCACC 57.800 50.000 0.00 0.00 0.00 4.61
6498 7390 2.159627 CGAAAGCAGATGTAACCACCAC 59.840 50.000 0.00 0.00 0.00 4.16
6499 7391 2.422597 CGAAAGCAGATGTAACCACCA 58.577 47.619 0.00 0.00 0.00 4.17
6514 7406 2.253452 GCCACTGTGCTGCGAAAG 59.747 61.111 1.29 0.00 0.00 2.62
6525 7417 3.879351 GAAAGCAACGCCGCCACTG 62.879 63.158 0.00 0.00 0.00 3.66
6526 7418 3.660111 GAAAGCAACGCCGCCACT 61.660 61.111 0.00 0.00 0.00 4.00
6540 7432 6.037098 CCCAACAAAATCAAACGTACTGAAA 58.963 36.000 4.53 0.00 0.00 2.69
6542 7434 4.882427 TCCCAACAAAATCAAACGTACTGA 59.118 37.500 3.00 3.00 0.00 3.41
6543 7435 4.973663 GTCCCAACAAAATCAAACGTACTG 59.026 41.667 0.00 0.00 0.00 2.74
6544 7436 4.260866 CGTCCCAACAAAATCAAACGTACT 60.261 41.667 0.00 0.00 0.00 2.73
6545 7437 3.969981 CGTCCCAACAAAATCAAACGTAC 59.030 43.478 0.00 0.00 0.00 3.67
6546 7438 3.626670 ACGTCCCAACAAAATCAAACGTA 59.373 39.130 0.00 0.00 39.98 3.57
6547 7439 2.424246 ACGTCCCAACAAAATCAAACGT 59.576 40.909 0.00 0.00 37.29 3.99
6548 7440 2.786578 CACGTCCCAACAAAATCAAACG 59.213 45.455 0.00 0.00 35.20 3.60
6549 7441 3.120041 CCACGTCCCAACAAAATCAAAC 58.880 45.455 0.00 0.00 0.00 2.93
6550 7442 3.024547 TCCACGTCCCAACAAAATCAAA 58.975 40.909 0.00 0.00 0.00 2.69
6551 7443 2.656002 TCCACGTCCCAACAAAATCAA 58.344 42.857 0.00 0.00 0.00 2.57
6552 7444 2.350057 TCCACGTCCCAACAAAATCA 57.650 45.000 0.00 0.00 0.00 2.57
6553 7445 2.671070 GCATCCACGTCCCAACAAAATC 60.671 50.000 0.00 0.00 0.00 2.17
6554 7446 1.272212 GCATCCACGTCCCAACAAAAT 59.728 47.619 0.00 0.00 0.00 1.82
6555 7447 0.671251 GCATCCACGTCCCAACAAAA 59.329 50.000 0.00 0.00 0.00 2.44
6556 7448 0.466372 TGCATCCACGTCCCAACAAA 60.466 50.000 0.00 0.00 0.00 2.83
6557 7449 0.466372 TTGCATCCACGTCCCAACAA 60.466 50.000 0.00 0.00 0.00 2.83
6558 7450 0.888736 CTTGCATCCACGTCCCAACA 60.889 55.000 0.00 0.00 0.00 3.33
6577 7469 9.573133 CCATAAGAAAAATTATGAACACAGGAC 57.427 33.333 7.80 0.00 43.06 3.85
6591 7483 4.033009 CTGAAGGGCCCCATAAGAAAAAT 58.967 43.478 21.43 0.00 0.00 1.82
6601 7493 1.148867 TGAAATTTCTGAAGGGCCCCA 59.851 47.619 21.43 9.76 0.00 4.96
6603 7495 2.493675 GAGTGAAATTTCTGAAGGGCCC 59.506 50.000 16.46 16.46 0.00 5.80
6605 7497 3.157087 TGGAGTGAAATTTCTGAAGGGC 58.843 45.455 18.64 2.40 0.00 5.19
6641 7533 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
6642 7534 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
6643 7535 5.247564 TGTTCTTATATTATGGGACGGAGGG 59.752 44.000 0.00 0.00 0.00 4.30
6644 7536 6.354794 TGTTCTTATATTATGGGACGGAGG 57.645 41.667 0.00 0.00 0.00 4.30
6645 7537 8.848474 AAATGTTCTTATATTATGGGACGGAG 57.152 34.615 0.00 0.00 0.00 4.63
6646 7538 9.635404 AAAAATGTTCTTATATTATGGGACGGA 57.365 29.630 0.00 0.00 0.00 4.69
6647 7539 9.677567 CAAAAATGTTCTTATATTATGGGACGG 57.322 33.333 0.00 0.00 0.00 4.79
6683 7575 9.488762 TCCCTCTGTCTCAAAATATAAGAACTA 57.511 33.333 0.00 0.00 0.00 2.24
6684 7576 8.380742 TCCCTCTGTCTCAAAATATAAGAACT 57.619 34.615 0.00 0.00 0.00 3.01
6685 7577 8.261522 ACTCCCTCTGTCTCAAAATATAAGAAC 58.738 37.037 0.00 0.00 0.00 3.01
6686 7578 8.380742 ACTCCCTCTGTCTCAAAATATAAGAA 57.619 34.615 0.00 0.00 0.00 2.52
6687 7579 7.979786 ACTCCCTCTGTCTCAAAATATAAGA 57.020 36.000 0.00 0.00 0.00 2.10
6688 7580 7.870445 GCTACTCCCTCTGTCTCAAAATATAAG 59.130 40.741 0.00 0.00 0.00 1.73
6689 7581 7.565398 AGCTACTCCCTCTGTCTCAAAATATAA 59.435 37.037 0.00 0.00 0.00 0.98
6690 7582 7.069986 AGCTACTCCCTCTGTCTCAAAATATA 58.930 38.462 0.00 0.00 0.00 0.86
6691 7583 5.902431 AGCTACTCCCTCTGTCTCAAAATAT 59.098 40.000 0.00 0.00 0.00 1.28
6692 7584 5.273208 AGCTACTCCCTCTGTCTCAAAATA 58.727 41.667 0.00 0.00 0.00 1.40
6693 7585 4.100373 AGCTACTCCCTCTGTCTCAAAAT 58.900 43.478 0.00 0.00 0.00 1.82
6694 7586 3.511477 AGCTACTCCCTCTGTCTCAAAA 58.489 45.455 0.00 0.00 0.00 2.44
6695 7587 3.176924 AGCTACTCCCTCTGTCTCAAA 57.823 47.619 0.00 0.00 0.00 2.69
6696 7588 2.909504 AGCTACTCCCTCTGTCTCAA 57.090 50.000 0.00 0.00 0.00 3.02
6697 7589 2.909504 AAGCTACTCCCTCTGTCTCA 57.090 50.000 0.00 0.00 0.00 3.27
6698 7590 4.545208 AAAAAGCTACTCCCTCTGTCTC 57.455 45.455 0.00 0.00 0.00 3.36
6699 7591 5.567025 CGTTAAAAAGCTACTCCCTCTGTCT 60.567 44.000 0.00 0.00 0.00 3.41
6700 7592 4.626172 CGTTAAAAAGCTACTCCCTCTGTC 59.374 45.833 0.00 0.00 0.00 3.51
6701 7593 4.562963 CCGTTAAAAAGCTACTCCCTCTGT 60.563 45.833 0.00 0.00 0.00 3.41
6702 7594 3.933332 CCGTTAAAAAGCTACTCCCTCTG 59.067 47.826 0.00 0.00 0.00 3.35
6703 7595 3.836562 TCCGTTAAAAAGCTACTCCCTCT 59.163 43.478 0.00 0.00 0.00 3.69
6704 7596 4.198028 TCCGTTAAAAAGCTACTCCCTC 57.802 45.455 0.00 0.00 0.00 4.30
6705 7597 4.041321 AGTTCCGTTAAAAAGCTACTCCCT 59.959 41.667 0.00 0.00 0.00 4.20
6706 7598 4.321718 AGTTCCGTTAAAAAGCTACTCCC 58.678 43.478 0.00 0.00 0.00 4.30
6707 7599 6.162079 AGTAGTTCCGTTAAAAAGCTACTCC 58.838 40.000 0.00 0.00 34.43 3.85
6708 7600 7.649370 AAGTAGTTCCGTTAAAAAGCTACTC 57.351 36.000 0.00 0.00 37.33 2.59
6709 7601 9.716531 ATAAAGTAGTTCCGTTAAAAAGCTACT 57.283 29.630 0.00 0.00 39.19 2.57
6710 7602 9.750882 CATAAAGTAGTTCCGTTAAAAAGCTAC 57.249 33.333 0.00 0.00 0.00 3.58
6711 7603 9.709495 TCATAAAGTAGTTCCGTTAAAAAGCTA 57.291 29.630 0.00 0.00 0.00 3.32
6712 7604 8.611654 TCATAAAGTAGTTCCGTTAAAAAGCT 57.388 30.769 0.00 0.00 0.00 3.74
6715 7607 8.825745 ACGTTCATAAAGTAGTTCCGTTAAAAA 58.174 29.630 0.00 0.00 0.00 1.94
6723 7615 8.546244 GCCTTAATACGTTCATAAAGTAGTTCC 58.454 37.037 0.00 0.00 0.00 3.62
6724 7616 9.090692 TGCCTTAATACGTTCATAAAGTAGTTC 57.909 33.333 0.00 0.00 0.00 3.01
6746 7638 9.637543 ATGTTTTGCATGATGAAGGAATTGCCT 62.638 37.037 0.00 0.00 42.40 4.75
6747 7639 3.530265 TTGCATGATGAAGGAATTGCC 57.470 42.857 0.00 0.00 0.00 4.52
6748 7640 4.691685 TGTTTTGCATGATGAAGGAATTGC 59.308 37.500 0.00 0.00 0.00 3.56
6749 7641 6.978343 ATGTTTTGCATGATGAAGGAATTG 57.022 33.333 0.00 0.00 36.26 2.32
6750 7642 7.372451 CAATGTTTTGCATGATGAAGGAATT 57.628 32.000 0.00 0.00 37.96 2.17
6783 7796 0.033504 GGTCGTCTGGCTTCTGTGAA 59.966 55.000 0.00 0.00 0.00 3.18
6813 7826 3.821033 TGGAACTTGGAAGAGCTTTTAGC 59.179 43.478 0.00 0.00 42.84 3.09
6814 7827 5.299279 TGTTGGAACTTGGAAGAGCTTTTAG 59.701 40.000 0.00 0.00 0.00 1.85
6815 7828 5.197451 TGTTGGAACTTGGAAGAGCTTTTA 58.803 37.500 0.00 0.00 0.00 1.52
6816 7829 4.023291 TGTTGGAACTTGGAAGAGCTTTT 58.977 39.130 0.00 0.00 0.00 2.27
6817 7830 3.631250 TGTTGGAACTTGGAAGAGCTTT 58.369 40.909 0.00 0.00 0.00 3.51
6818 7831 3.297134 TGTTGGAACTTGGAAGAGCTT 57.703 42.857 0.00 0.00 0.00 3.74
6819 7832 3.416156 GATGTTGGAACTTGGAAGAGCT 58.584 45.455 0.00 0.00 0.00 4.09
6820 7833 2.489722 GGATGTTGGAACTTGGAAGAGC 59.510 50.000 0.00 0.00 0.00 4.09
6821 7834 3.084786 GGGATGTTGGAACTTGGAAGAG 58.915 50.000 0.00 0.00 0.00 2.85
6855 7868 1.759445 TGGATCTCTAGCAGCCAGAAC 59.241 52.381 0.00 0.00 0.00 3.01
6857 7870 1.342374 TGTGGATCTCTAGCAGCCAGA 60.342 52.381 0.00 0.00 0.00 3.86
6914 7932 1.136147 CTGAATCTTGTGCGGCTGC 59.864 57.895 11.65 11.65 43.20 5.25
6915 7933 1.129998 CTTCTGAATCTTGTGCGGCTG 59.870 52.381 0.00 0.00 0.00 4.85
6916 7934 1.002430 TCTTCTGAATCTTGTGCGGCT 59.998 47.619 0.00 0.00 0.00 5.52
6917 7935 1.442769 TCTTCTGAATCTTGTGCGGC 58.557 50.000 0.00 0.00 0.00 6.53
6919 7937 5.542616 AGATTTCTTCTGAATCTTGTGCG 57.457 39.130 0.00 0.00 31.79 5.34
6931 7949 2.475666 GCGCTGCCAGATTTCTTCT 58.524 52.632 0.00 0.00 33.90 2.85
6949 7967 4.489771 GGCATGGGTGGAGGACGG 62.490 72.222 0.00 0.00 0.00 4.79
7026 8044 2.145397 TGCTCTAAGGTGGTCGAGAT 57.855 50.000 0.00 0.00 0.00 2.75
7039 8057 2.024846 AGGGTCTGCTAGAGTTGCTCTA 60.025 50.000 0.00 5.84 41.50 2.43
7042 8060 0.901124 CAGGGTCTGCTAGAGTTGCT 59.099 55.000 0.00 0.00 0.00 3.91
7043 8061 3.450028 CAGGGTCTGCTAGAGTTGC 57.550 57.895 0.00 0.00 0.00 4.17
7053 8071 2.161609 GGTCGTATTTTTGCAGGGTCTG 59.838 50.000 0.00 0.00 34.12 3.51
7054 8072 2.433436 GGTCGTATTTTTGCAGGGTCT 58.567 47.619 0.00 0.00 0.00 3.85
7055 8073 1.471287 GGGTCGTATTTTTGCAGGGTC 59.529 52.381 0.00 0.00 0.00 4.46
7056 8074 1.541379 GGGTCGTATTTTTGCAGGGT 58.459 50.000 0.00 0.00 0.00 4.34
7057 8075 0.450184 CGGGTCGTATTTTTGCAGGG 59.550 55.000 0.00 0.00 0.00 4.45
7058 8076 0.179174 GCGGGTCGTATTTTTGCAGG 60.179 55.000 0.00 0.00 0.00 4.85
7059 8077 0.519519 TGCGGGTCGTATTTTTGCAG 59.480 50.000 0.00 0.00 0.00 4.41
7060 8078 0.952280 TTGCGGGTCGTATTTTTGCA 59.048 45.000 0.00 0.00 0.00 4.08
7061 8079 2.053282 TTTGCGGGTCGTATTTTTGC 57.947 45.000 0.00 0.00 0.00 3.68
7062 8080 2.402378 CGTTTTGCGGGTCGTATTTTTG 59.598 45.455 0.00 0.00 36.85 2.44
7063 8081 2.652795 CGTTTTGCGGGTCGTATTTTT 58.347 42.857 0.00 0.00 36.85 1.94
7064 8082 1.663730 GCGTTTTGCGGGTCGTATTTT 60.664 47.619 0.00 0.00 41.69 1.82
7065 8083 0.110101 GCGTTTTGCGGGTCGTATTT 60.110 50.000 0.00 0.00 41.69 1.40
7066 8084 1.498611 GCGTTTTGCGGGTCGTATT 59.501 52.632 0.00 0.00 41.69 1.89
7067 8085 3.171056 GCGTTTTGCGGGTCGTAT 58.829 55.556 0.00 0.00 41.69 3.06
7089 8107 2.017559 ATACGGGTTCTGCTCTCCGC 62.018 60.000 0.00 0.00 45.65 5.54
7090 8108 0.030908 GATACGGGTTCTGCTCTCCG 59.969 60.000 0.00 0.00 46.95 4.63
7091 8109 1.404843 AGATACGGGTTCTGCTCTCC 58.595 55.000 0.00 0.00 0.00 3.71
7092 8110 4.361420 GTTTAGATACGGGTTCTGCTCTC 58.639 47.826 0.00 0.00 0.00 3.20
7093 8111 3.132467 GGTTTAGATACGGGTTCTGCTCT 59.868 47.826 0.00 0.00 0.00 4.09
7094 8112 3.132467 AGGTTTAGATACGGGTTCTGCTC 59.868 47.826 0.00 0.00 0.00 4.26
7095 8113 3.105283 AGGTTTAGATACGGGTTCTGCT 58.895 45.455 0.00 0.00 0.00 4.24
7096 8114 3.195661 CAGGTTTAGATACGGGTTCTGC 58.804 50.000 0.00 0.00 0.00 4.26
7097 8115 3.195661 GCAGGTTTAGATACGGGTTCTG 58.804 50.000 0.00 0.00 0.00 3.02
7098 8116 2.835764 TGCAGGTTTAGATACGGGTTCT 59.164 45.455 0.00 0.00 0.00 3.01
7099 8117 3.255969 TGCAGGTTTAGATACGGGTTC 57.744 47.619 0.00 0.00 0.00 3.62
7100 8118 3.926058 ATGCAGGTTTAGATACGGGTT 57.074 42.857 0.00 0.00 0.00 4.11
7101 8119 5.562298 AATATGCAGGTTTAGATACGGGT 57.438 39.130 0.00 0.00 0.00 5.28
7102 8120 6.485313 TCAAAATATGCAGGTTTAGATACGGG 59.515 38.462 0.00 0.00 0.00 5.28
7103 8121 7.490962 TCAAAATATGCAGGTTTAGATACGG 57.509 36.000 0.00 0.00 0.00 4.02
7104 8122 9.781834 TTTTCAAAATATGCAGGTTTAGATACG 57.218 29.630 0.00 0.00 0.00 3.06
7128 8146 5.638596 ATTTCTCCCGCGAAAGTATTTTT 57.361 34.783 8.23 0.00 39.27 1.94
7129 8147 5.399013 CAATTTCTCCCGCGAAAGTATTTT 58.601 37.500 8.23 0.00 39.27 1.82
7130 8148 4.674362 GCAATTTCTCCCGCGAAAGTATTT 60.674 41.667 8.23 0.00 43.98 1.40
7131 8149 3.181500 GCAATTTCTCCCGCGAAAGTATT 60.181 43.478 8.23 6.37 36.44 1.89
7132 8150 2.354821 GCAATTTCTCCCGCGAAAGTAT 59.645 45.455 8.23 0.34 36.44 2.12
7133 8151 1.735571 GCAATTTCTCCCGCGAAAGTA 59.264 47.619 8.23 0.00 36.44 2.24
7134 8152 0.521735 GCAATTTCTCCCGCGAAAGT 59.478 50.000 8.23 0.00 36.44 2.66
7135 8153 0.521291 TGCAATTTCTCCCGCGAAAG 59.479 50.000 8.23 4.21 36.44 2.62
7136 8154 0.239879 GTGCAATTTCTCCCGCGAAA 59.760 50.000 8.23 0.00 37.31 3.46
7137 8155 0.886938 TGTGCAATTTCTCCCGCGAA 60.887 50.000 8.23 0.00 0.00 4.70
7138 8156 0.886938 TTGTGCAATTTCTCCCGCGA 60.887 50.000 8.23 0.00 0.00 5.87
7139 8157 0.039617 TTTGTGCAATTTCTCCCGCG 60.040 50.000 0.00 0.00 0.00 6.46
7140 8158 1.269517 TGTTTGTGCAATTTCTCCCGC 60.270 47.619 0.00 0.00 0.00 6.13
7141 8159 2.791383 TGTTTGTGCAATTTCTCCCG 57.209 45.000 0.00 0.00 0.00 5.14
7142 8160 5.391312 ACTATGTTTGTGCAATTTCTCCC 57.609 39.130 0.00 0.00 0.00 4.30
7143 8161 6.446318 TGAACTATGTTTGTGCAATTTCTCC 58.554 36.000 0.00 0.00 0.00 3.71
7144 8162 7.809331 TGATGAACTATGTTTGTGCAATTTCTC 59.191 33.333 0.00 0.00 0.00 2.87
7145 8163 7.596248 GTGATGAACTATGTTTGTGCAATTTCT 59.404 33.333 0.00 0.00 0.00 2.52
7146 8164 7.381948 TGTGATGAACTATGTTTGTGCAATTTC 59.618 33.333 0.00 0.00 0.00 2.17
7147 8165 7.208777 TGTGATGAACTATGTTTGTGCAATTT 58.791 30.769 0.00 0.00 0.00 1.82
7148 8166 6.747125 TGTGATGAACTATGTTTGTGCAATT 58.253 32.000 0.00 0.00 0.00 2.32
7149 8167 6.330004 TGTGATGAACTATGTTTGTGCAAT 57.670 33.333 0.00 0.00 0.00 3.56
7150 8168 5.764487 TGTGATGAACTATGTTTGTGCAA 57.236 34.783 0.00 0.00 0.00 4.08
7151 8169 5.963176 ATGTGATGAACTATGTTTGTGCA 57.037 34.783 0.00 0.00 0.00 4.57
7152 8170 7.076842 AGTATGTGATGAACTATGTTTGTGC 57.923 36.000 0.00 0.00 0.00 4.57
7153 8171 9.150348 TGTAGTATGTGATGAACTATGTTTGTG 57.850 33.333 0.00 0.00 0.00 3.33
7154 8172 9.890629 ATGTAGTATGTGATGAACTATGTTTGT 57.109 29.630 0.00 0.00 0.00 2.83
7185 8203 9.612066 TGCTTATAGTTTGTTGATCATGTGATA 57.388 29.630 0.00 0.00 34.37 2.15
7186 8204 8.510243 TGCTTATAGTTTGTTGATCATGTGAT 57.490 30.769 0.00 0.00 37.51 3.06
7187 8205 7.920160 TGCTTATAGTTTGTTGATCATGTGA 57.080 32.000 0.00 0.00 0.00 3.58
7188 8206 9.874215 CTATGCTTATAGTTTGTTGATCATGTG 57.126 33.333 0.00 0.00 0.00 3.21
7189 8207 8.562892 GCTATGCTTATAGTTTGTTGATCATGT 58.437 33.333 0.00 0.00 0.00 3.21
7190 8208 8.781196 AGCTATGCTTATAGTTTGTTGATCATG 58.219 33.333 0.00 0.00 33.89 3.07
7191 8209 8.915057 AGCTATGCTTATAGTTTGTTGATCAT 57.085 30.769 0.00 0.00 33.89 2.45
7206 8224 9.881649 ACGTAGTATGTAGTATAGCTATGCTTA 57.118 33.333 26.43 17.24 41.94 3.09
7207 8225 8.789825 ACGTAGTATGTAGTATAGCTATGCTT 57.210 34.615 26.43 13.39 41.94 3.91
7208 8226 8.789825 AACGTAGTATGTAGTATAGCTATGCT 57.210 34.615 24.97 24.97 45.00 3.79
7222 8240 9.331282 CCCTAGTACTAGTTTAACGTAGTATGT 57.669 37.037 24.84 0.00 45.00 2.29
7223 8241 8.778358 CCCCTAGTACTAGTTTAACGTAGTATG 58.222 40.741 24.84 7.41 45.00 2.39
7224 8242 7.939588 CCCCCTAGTACTAGTTTAACGTAGTAT 59.060 40.741 24.84 8.36 45.00 2.12
7225 8243 7.092578 ACCCCCTAGTACTAGTTTAACGTAGTA 60.093 40.741 24.84 8.99 45.00 1.82
7227 8245 6.122964 ACCCCCTAGTACTAGTTTAACGTAG 58.877 44.000 24.84 9.02 0.00 3.51
7228 8246 6.074698 ACCCCCTAGTACTAGTTTAACGTA 57.925 41.667 24.84 0.00 0.00 3.57
7229 8247 4.935578 ACCCCCTAGTACTAGTTTAACGT 58.064 43.478 24.84 11.27 0.00 3.99
7230 8248 4.035675 CGACCCCCTAGTACTAGTTTAACG 59.964 50.000 24.84 19.63 0.00 3.18
7231 8249 4.339530 CCGACCCCCTAGTACTAGTTTAAC 59.660 50.000 24.84 13.70 0.00 2.01
7232 8250 4.229582 TCCGACCCCCTAGTACTAGTTTAA 59.770 45.833 24.84 3.38 0.00 1.52
7233 8251 3.785887 TCCGACCCCCTAGTACTAGTTTA 59.214 47.826 24.84 0.00 0.00 2.01
7234 8252 2.582636 TCCGACCCCCTAGTACTAGTTT 59.417 50.000 24.84 8.85 0.00 2.66
7235 8253 2.208872 TCCGACCCCCTAGTACTAGTT 58.791 52.381 24.84 9.17 0.00 2.24
7236 8254 1.898863 TCCGACCCCCTAGTACTAGT 58.101 55.000 24.84 10.23 0.00 2.57
7237 8255 2.643801 AGATCCGACCCCCTAGTACTAG 59.356 54.545 21.11 21.11 0.00 2.57
7238 8256 2.374504 CAGATCCGACCCCCTAGTACTA 59.625 54.545 1.89 1.89 0.00 1.82
7239 8257 1.145325 CAGATCCGACCCCCTAGTACT 59.855 57.143 0.00 0.00 0.00 2.73
7240 8258 1.144503 TCAGATCCGACCCCCTAGTAC 59.855 57.143 0.00 0.00 0.00 2.73
7241 8259 1.144503 GTCAGATCCGACCCCCTAGTA 59.855 57.143 0.00 0.00 0.00 1.82
7242 8260 0.106116 GTCAGATCCGACCCCCTAGT 60.106 60.000 0.00 0.00 0.00 2.57
7243 8261 1.173444 CGTCAGATCCGACCCCCTAG 61.173 65.000 3.47 0.00 31.91 3.02
7244 8262 1.152819 CGTCAGATCCGACCCCCTA 60.153 63.158 3.47 0.00 31.91 3.53
7245 8263 2.442272 CGTCAGATCCGACCCCCT 60.442 66.667 3.47 0.00 31.91 4.79
7246 8264 3.537874 CCGTCAGATCCGACCCCC 61.538 72.222 3.47 0.00 31.91 5.40
7247 8265 4.222847 GCCGTCAGATCCGACCCC 62.223 72.222 3.47 0.00 31.91 4.95
7248 8266 4.570663 CGCCGTCAGATCCGACCC 62.571 72.222 3.47 0.00 31.91 4.46
7249 8267 4.570663 CCGCCGTCAGATCCGACC 62.571 72.222 3.47 0.00 31.91 4.79
7253 8271 4.933064 CTCGCCGCCGTCAGATCC 62.933 72.222 0.00 0.00 35.54 3.36
7254 8272 4.933064 CCTCGCCGCCGTCAGATC 62.933 72.222 0.00 0.00 35.54 2.75
7267 8285 3.777925 CAGTTTGCCGCGACCTCG 61.778 66.667 8.23 0.00 43.27 4.63
7268 8286 3.423154 CCAGTTTGCCGCGACCTC 61.423 66.667 8.23 0.00 0.00 3.85
7269 8287 3.936203 TCCAGTTTGCCGCGACCT 61.936 61.111 8.23 0.00 0.00 3.85
7270 8288 3.723348 GTCCAGTTTGCCGCGACC 61.723 66.667 8.23 0.00 0.00 4.79
7271 8289 4.072088 CGTCCAGTTTGCCGCGAC 62.072 66.667 8.23 0.00 0.00 5.19
7272 8290 4.287781 TCGTCCAGTTTGCCGCGA 62.288 61.111 8.23 0.00 0.00 5.87
7273 8291 4.072088 GTCGTCCAGTTTGCCGCG 62.072 66.667 0.00 0.00 0.00 6.46
7274 8292 4.072088 CGTCGTCCAGTTTGCCGC 62.072 66.667 0.00 0.00 0.00 6.53
7275 8293 2.654912 GACGTCGTCCAGTTTGCCG 61.655 63.158 14.60 0.00 0.00 5.69
7276 8294 2.654912 CGACGTCGTCCAGTTTGCC 61.655 63.158 29.08 0.00 34.11 4.52
7277 8295 2.844146 CGACGTCGTCCAGTTTGC 59.156 61.111 29.08 0.00 34.11 3.68
7287 8305 4.477975 GGCTCCTCCACGACGTCG 62.478 72.222 34.58 34.58 46.33 5.12
7288 8306 4.477975 CGGCTCCTCCACGACGTC 62.478 72.222 5.18 5.18 34.01 4.34
7291 8309 4.131088 GTCCGGCTCCTCCACGAC 62.131 72.222 0.00 0.00 34.01 4.34
7302 8320 2.586357 GAGGATTGAGCGTCCGGC 60.586 66.667 0.00 0.00 40.76 6.13
7303 8321 2.107141 GGAGGATTGAGCGTCCGG 59.893 66.667 0.00 0.00 40.76 5.14
7304 8322 1.066587 GAGGAGGATTGAGCGTCCG 59.933 63.158 2.74 0.00 45.15 4.79
7305 8323 1.066587 CGAGGAGGATTGAGCGTCC 59.933 63.158 0.00 0.00 41.85 4.79
7306 8324 1.590259 GCGAGGAGGATTGAGCGTC 60.590 63.158 0.00 0.00 0.00 5.19
7307 8325 2.496817 GCGAGGAGGATTGAGCGT 59.503 61.111 0.00 0.00 0.00 5.07
7308 8326 2.279784 GGCGAGGAGGATTGAGCG 60.280 66.667 0.00 0.00 0.00 5.03
7309 8327 2.279784 CGGCGAGGAGGATTGAGC 60.280 66.667 0.00 0.00 0.00 4.26
7310 8328 2.127869 TCCGGCGAGGAGGATTGAG 61.128 63.158 9.30 0.00 45.98 3.02
7311 8329 2.043349 TCCGGCGAGGAGGATTGA 60.043 61.111 9.30 0.00 45.98 2.57
7319 8337 3.855352 CTATGCAGCTCCGGCGAGG 62.855 68.421 9.30 0.83 44.37 4.63
7320 8338 2.152297 ATCTATGCAGCTCCGGCGAG 62.152 60.000 9.30 5.11 44.37 5.03
7321 8339 2.147315 GATCTATGCAGCTCCGGCGA 62.147 60.000 9.30 0.00 44.37 5.54
7322 8340 1.735920 GATCTATGCAGCTCCGGCG 60.736 63.158 0.00 0.00 44.37 6.46
7323 8341 1.735920 CGATCTATGCAGCTCCGGC 60.736 63.158 0.00 0.00 39.06 6.13
7324 8342 0.387878 GTCGATCTATGCAGCTCCGG 60.388 60.000 0.00 0.00 0.00 5.14
7325 8343 0.727457 CGTCGATCTATGCAGCTCCG 60.727 60.000 0.00 0.00 0.00 4.63
7326 8344 0.312416 ACGTCGATCTATGCAGCTCC 59.688 55.000 0.00 0.00 0.00 4.70
7327 8345 2.224549 AGTACGTCGATCTATGCAGCTC 59.775 50.000 0.00 0.00 0.00 4.09
7328 8346 2.222886 AGTACGTCGATCTATGCAGCT 58.777 47.619 0.00 0.00 0.00 4.24
7329 8347 2.690173 AGTACGTCGATCTATGCAGC 57.310 50.000 0.00 0.00 0.00 5.25
7330 8348 4.459606 GAGAAGTACGTCGATCTATGCAG 58.540 47.826 0.00 0.00 0.00 4.41
7331 8349 3.250280 GGAGAAGTACGTCGATCTATGCA 59.750 47.826 0.00 0.00 0.00 3.96
7332 8350 3.664798 CGGAGAAGTACGTCGATCTATGC 60.665 52.174 0.00 0.00 0.00 3.14
7333 8351 3.664798 GCGGAGAAGTACGTCGATCTATG 60.665 52.174 0.00 0.00 0.00 2.23
7334 8352 2.479656 GCGGAGAAGTACGTCGATCTAT 59.520 50.000 0.00 0.00 0.00 1.98
7335 8353 1.863454 GCGGAGAAGTACGTCGATCTA 59.137 52.381 0.00 0.00 0.00 1.98
7336 8354 0.656785 GCGGAGAAGTACGTCGATCT 59.343 55.000 0.00 0.00 0.00 2.75
7337 8355 0.316854 GGCGGAGAAGTACGTCGATC 60.317 60.000 0.00 0.00 0.00 3.69
7338 8356 0.747283 AGGCGGAGAAGTACGTCGAT 60.747 55.000 0.00 0.00 40.09 3.59
7339 8357 0.108186 TAGGCGGAGAAGTACGTCGA 60.108 55.000 0.00 0.00 40.09 4.20
7340 8358 0.027324 GTAGGCGGAGAAGTACGTCG 59.973 60.000 3.05 0.00 40.09 5.12
7341 8359 1.330213 GAGTAGGCGGAGAAGTACGTC 59.670 57.143 0.00 0.00 34.42 4.34
7342 8360 1.377536 GAGTAGGCGGAGAAGTACGT 58.622 55.000 0.00 0.00 0.00 3.57
7343 8361 0.662085 GGAGTAGGCGGAGAAGTACG 59.338 60.000 0.00 0.00 0.00 3.67
7344 8362 0.662085 CGGAGTAGGCGGAGAAGTAC 59.338 60.000 0.00 0.00 0.00 2.73
7345 8363 1.099879 GCGGAGTAGGCGGAGAAGTA 61.100 60.000 0.00 0.00 0.00 2.24
7346 8364 2.416432 GCGGAGTAGGCGGAGAAGT 61.416 63.158 0.00 0.00 0.00 3.01
7347 8365 2.413765 GCGGAGTAGGCGGAGAAG 59.586 66.667 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.