Multiple sequence alignment - TraesCS6B01G306300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G306300 chr6B 100.000 4662 0 0 1 4662 549626273 549621612 0.000000e+00 8610.0
1 TraesCS6B01G306300 chr6B 87.000 200 22 2 611 807 696128437 696128635 6.070000e-54 222.0
2 TraesCS6B01G306300 chr6D 92.274 3430 144 59 834 4182 364497083 364493694 0.000000e+00 4754.0
3 TraesCS6B01G306300 chr6D 97.695 347 6 1 4247 4591 95812112 95812458 3.110000e-166 595.0
4 TraesCS6B01G306300 chr6D 97.406 347 7 1 4247 4591 399675406 399675060 1.440000e-164 590.0
5 TraesCS6B01G306300 chr6D 97.406 347 7 1 4247 4591 430630238 430630584 1.440000e-164 590.0
6 TraesCS6B01G306300 chr6D 86.290 124 10 4 4539 4662 279121052 279120936 1.360000e-25 128.0
7 TraesCS6B01G306300 chr6D 86.290 124 10 5 4539 4662 453134491 453134607 1.360000e-25 128.0
8 TraesCS6B01G306300 chr6D 92.045 88 5 2 4178 4265 472157165 472157080 6.330000e-24 122.0
9 TraesCS6B01G306300 chr6A 92.620 2046 96 17 2152 4182 506099349 506097344 0.000000e+00 2891.0
10 TraesCS6B01G306300 chr6A 95.585 1291 35 7 839 2117 506100629 506099349 0.000000e+00 2049.0
11 TraesCS6B01G306300 chr6A 91.111 90 6 2 4182 4271 129087478 129087391 2.280000e-23 121.0
12 TraesCS6B01G306300 chr5B 93.359 783 47 3 1 781 112179552 112178773 0.000000e+00 1153.0
13 TraesCS6B01G306300 chr5B 91.332 796 63 4 1 791 538944922 538945716 0.000000e+00 1083.0
14 TraesCS6B01G306300 chr7B 85.773 970 130 6 968 1936 333963302 333962340 0.000000e+00 1020.0
15 TraesCS6B01G306300 chr7B 91.941 273 16 4 538 805 746182827 746182556 1.220000e-100 377.0
16 TraesCS6B01G306300 chr7B 95.122 82 2 2 4168 4247 732610548 732610629 1.360000e-25 128.0
17 TraesCS6B01G306300 chr7A 85.462 963 133 5 970 1932 194791335 194792290 0.000000e+00 996.0
18 TraesCS6B01G306300 chr7D 85.855 912 128 1 1021 1932 189250849 189249939 0.000000e+00 968.0
19 TraesCS6B01G306300 chr7D 87.097 124 9 4 4539 4662 202483555 202483439 2.930000e-27 134.0
20 TraesCS6B01G306300 chr7D 100.000 30 0 0 4150 4179 442281320 442281349 6.520000e-04 56.5
21 TraesCS6B01G306300 chr2B 90.460 587 53 3 1 585 110449206 110449791 0.000000e+00 771.0
22 TraesCS6B01G306300 chr2B 92.839 391 18 9 4207 4592 522993018 522993403 4.070000e-155 558.0
23 TraesCS6B01G306300 chr2B 90.517 232 18 2 577 805 110455099 110455329 2.110000e-78 303.0
24 TraesCS6B01G306300 chr2B 87.879 99 9 3 4168 4265 793973211 793973115 3.810000e-21 113.0
25 TraesCS6B01G306300 chr3D 97.695 347 6 1 4247 4591 335803081 335803427 3.110000e-166 595.0
26 TraesCS6B01G306300 chr3D 86.290 124 10 5 4539 4662 591252947 591252831 1.360000e-25 128.0
27 TraesCS6B01G306300 chr3D 95.946 74 2 1 4175 4247 538359620 538359547 8.190000e-23 119.0
28 TraesCS6B01G306300 chr5D 97.406 347 7 1 4247 4591 356436075 356436421 1.440000e-164 590.0
29 TraesCS6B01G306300 chr5D 86.290 124 10 4 4539 4662 116536400 116536284 1.360000e-25 128.0
30 TraesCS6B01G306300 chr4D 97.406 347 7 1 4247 4591 340698101 340698447 1.440000e-164 590.0
31 TraesCS6B01G306300 chr2D 97.151 351 7 2 4243 4591 472431463 472431114 1.440000e-164 590.0
32 TraesCS6B01G306300 chr1D 97.406 347 7 1 4247 4591 74888871 74889217 1.440000e-164 590.0
33 TraesCS6B01G306300 chr5A 86.290 124 10 4 4539 4662 449818203 449818087 1.360000e-25 128.0
34 TraesCS6B01G306300 chr5A 84.328 134 12 6 4531 4662 477508278 477508404 6.330000e-24 122.0
35 TraesCS6B01G306300 chr2A 93.182 88 5 1 4178 4265 613334755 613334841 1.360000e-25 128.0
36 TraesCS6B01G306300 chr2A 85.246 122 14 3 4182 4300 122707210 122707330 6.330000e-24 122.0
37 TraesCS6B01G306300 chr1A 94.118 85 4 1 4181 4265 584516557 584516474 1.360000e-25 128.0
38 TraesCS6B01G306300 chrUn 85.484 124 15 2 4539 4662 137848126 137848246 4.900000e-25 126.0
39 TraesCS6B01G306300 chr1B 85.600 125 10 5 4539 4662 475475079 475474962 1.760000e-24 124.0
40 TraesCS6B01G306300 chr1B 87.755 98 10 2 4150 4247 563062500 563062595 3.810000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G306300 chr6B 549621612 549626273 4661 True 8610 8610 100.0000 1 4662 1 chr6B.!!$R1 4661
1 TraesCS6B01G306300 chr6D 364493694 364497083 3389 True 4754 4754 92.2740 834 4182 1 chr6D.!!$R2 3348
2 TraesCS6B01G306300 chr6A 506097344 506100629 3285 True 2470 2891 94.1025 839 4182 2 chr6A.!!$R2 3343
3 TraesCS6B01G306300 chr5B 112178773 112179552 779 True 1153 1153 93.3590 1 781 1 chr5B.!!$R1 780
4 TraesCS6B01G306300 chr5B 538944922 538945716 794 False 1083 1083 91.3320 1 791 1 chr5B.!!$F1 790
5 TraesCS6B01G306300 chr7B 333962340 333963302 962 True 1020 1020 85.7730 968 1936 1 chr7B.!!$R1 968
6 TraesCS6B01G306300 chr7A 194791335 194792290 955 False 996 996 85.4620 970 1932 1 chr7A.!!$F1 962
7 TraesCS6B01G306300 chr7D 189249939 189250849 910 True 968 968 85.8550 1021 1932 1 chr7D.!!$R1 911
8 TraesCS6B01G306300 chr2B 110449206 110449791 585 False 771 771 90.4600 1 585 1 chr2B.!!$F1 584

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
902 907 0.249398 GGTTGGCTCACACGGAGTAT 59.751 55.0 0.0 0.0 45.88 2.12 F
2205 2277 0.896940 ATGCCCAAACCTGCTGACAG 60.897 55.0 0.0 0.0 44.05 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2447 2521 0.675633 GAGCACCCATGTTTTGCAGT 59.324 50.0 11.67 0.0 38.81 4.4 R
3664 3738 0.241213 TCGTCGCTTCACCAAGAGAG 59.759 55.0 0.00 0.0 38.92 3.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
253 254 1.006878 GAGGTACACCCTACAGTCCCT 59.993 57.143 0.00 0.00 46.51 4.20
270 271 1.643811 CCCTAAAATCCCCAAGGTGGA 59.356 52.381 0.00 0.00 40.96 4.02
316 317 3.306641 CGGAGGAAGGATGGATGAAGATC 60.307 52.174 0.00 0.00 0.00 2.75
360 362 1.537889 TGGCGGAAAAGGAGGAGGA 60.538 57.895 0.00 0.00 0.00 3.71
395 397 3.766591 AGGGATCAGAACGGAGCATATAG 59.233 47.826 0.00 0.00 0.00 1.31
454 456 1.047596 GGAGGCAGCTGAGATCCTGA 61.048 60.000 20.43 0.00 0.00 3.86
482 484 2.726274 GGCACTGCATATGGCTGC 59.274 61.111 15.14 4.26 44.55 5.25
517 519 2.836981 AGGAAGATGCACTTAGAGCTGT 59.163 45.455 3.05 0.00 39.13 4.40
574 576 1.968493 ACAGAAACCTGAGCGGAGTTA 59.032 47.619 0.00 0.00 35.67 2.24
589 591 2.376109 GAGTTAGACCGTGGATCTGGA 58.624 52.381 6.25 0.00 0.00 3.86
600 602 4.065088 CGTGGATCTGGAAAGTGAAAGAA 58.935 43.478 0.00 0.00 0.00 2.52
612 614 7.285172 TGGAAAGTGAAAGAAATGATCAGTTCA 59.715 33.333 30.99 17.50 37.82 3.18
682 684 0.384669 ACATAAGCTCGCGAGGGTAC 59.615 55.000 35.10 19.60 0.00 3.34
802 807 4.996062 CGGAGCGTTTACCTTAAAGAAA 57.004 40.909 0.00 0.00 0.00 2.52
803 808 5.347012 CGGAGCGTTTACCTTAAAGAAAA 57.653 39.130 0.00 0.00 0.00 2.29
804 809 5.750650 CGGAGCGTTTACCTTAAAGAAAAA 58.249 37.500 0.00 0.00 0.00 1.94
822 827 2.256117 AAAAGACCAGTCACGAAGGG 57.744 50.000 0.00 0.00 0.00 3.95
823 828 1.420430 AAAGACCAGTCACGAAGGGA 58.580 50.000 0.00 0.00 0.00 4.20
824 829 0.969894 AAGACCAGTCACGAAGGGAG 59.030 55.000 0.00 0.00 0.00 4.30
825 830 0.900647 AGACCAGTCACGAAGGGAGG 60.901 60.000 0.00 0.00 0.00 4.30
826 831 1.889530 GACCAGTCACGAAGGGAGGG 61.890 65.000 0.00 0.00 0.00 4.30
827 832 2.266055 CAGTCACGAAGGGAGGGC 59.734 66.667 0.00 0.00 0.00 5.19
828 833 2.120718 AGTCACGAAGGGAGGGCT 59.879 61.111 0.00 0.00 0.00 5.19
829 834 2.266055 GTCACGAAGGGAGGGCTG 59.734 66.667 0.00 0.00 0.00 4.85
830 835 2.203788 TCACGAAGGGAGGGCTGT 60.204 61.111 0.00 0.00 0.00 4.40
831 836 2.266055 CACGAAGGGAGGGCTGTC 59.734 66.667 0.00 0.00 0.00 3.51
832 837 2.203788 ACGAAGGGAGGGCTGTCA 60.204 61.111 0.00 0.00 0.00 3.58
833 838 2.286523 ACGAAGGGAGGGCTGTCAG 61.287 63.158 0.00 0.00 0.00 3.51
834 839 2.270527 GAAGGGAGGGCTGTCAGC 59.729 66.667 16.93 16.93 41.46 4.26
902 907 0.249398 GGTTGGCTCACACGGAGTAT 59.751 55.000 0.00 0.00 45.88 2.12
911 916 5.049543 GGCTCACACGGAGTATACTAGTAAG 60.050 48.000 6.70 8.49 45.88 2.34
1016 1034 3.550431 CATGGAGGGATCCGCCGT 61.550 66.667 15.28 12.93 46.74 5.68
1503 1521 2.815308 GTCATCGGTGGCGGAGAT 59.185 61.111 0.00 0.00 0.00 2.75
1548 1566 1.137086 CTCACCAAGTACGGATCCCAG 59.863 57.143 6.06 0.00 0.00 4.45
1563 1581 2.775418 TCCCAGGTGTACATCATCCAT 58.225 47.619 9.22 0.00 0.00 3.41
1720 1738 2.872858 GTCAAGAACTTGGTGACTGGTC 59.127 50.000 13.46 0.00 40.78 4.02
1866 1884 0.914417 ATACCAGTGTGGAGGGGGTG 60.914 60.000 0.00 0.00 40.96 4.61
1908 1926 3.253677 AGGATAAGAAGTATCGTCAGGCG 59.746 47.826 0.00 0.00 39.78 5.52
2097 2168 7.336931 AGTGACAATAGAAAGTGTTGTTTGAGT 59.663 33.333 0.00 0.00 40.34 3.41
2102 2173 9.352784 CAATAGAAAGTGTTGTTTGAGTTTTGA 57.647 29.630 0.00 0.00 0.00 2.69
2106 2177 9.103861 AGAAAGTGTTGTTTGAGTTTTGAAAAA 57.896 25.926 0.00 0.00 0.00 1.94
2172 2244 6.665992 ATTAGTTCGCTACATTCTGGGATA 57.334 37.500 0.00 0.00 0.00 2.59
2186 2258 3.843619 TCTGGGATATGTTGGACTGTTGA 59.156 43.478 0.00 0.00 0.00 3.18
2205 2277 0.896940 ATGCCCAAACCTGCTGACAG 60.897 55.000 0.00 0.00 44.05 3.51
2245 2317 1.284785 TCCAAGCAAGGGTAATGGGAG 59.715 52.381 0.00 0.00 0.00 4.30
2260 2332 5.791336 AATGGGAGTCAGTTTCCTTTTTC 57.209 39.130 0.00 0.00 35.01 2.29
2261 2333 3.211045 TGGGAGTCAGTTTCCTTTTTCG 58.789 45.455 0.00 0.00 35.01 3.46
2290 2363 1.222936 CTTGGTAGCAGGGCTCCAG 59.777 63.158 0.00 0.00 40.44 3.86
2305 2378 4.222366 GGGCTCCAGTACTTTACAGTAACT 59.778 45.833 0.00 0.00 37.24 2.24
2374 2448 6.300354 ACCAGAACGAATGAAAACTTACAG 57.700 37.500 0.00 0.00 0.00 2.74
2405 2479 1.341383 CCTGCCTGGCTTATCAAACCT 60.341 52.381 21.03 0.00 0.00 3.50
2447 2521 5.428457 ACATCTATTACAACACCCATCAGGA 59.572 40.000 0.00 0.00 39.89 3.86
2569 2643 3.009115 ATACCCCTGCAGGCGTGT 61.009 61.111 29.48 21.92 0.00 4.49
2591 2665 0.676151 CTCCAGCCAGCAAAGTCTCC 60.676 60.000 0.00 0.00 0.00 3.71
2631 2705 3.959495 AACATGCCCATTCTAGGACAT 57.041 42.857 0.00 0.00 0.00 3.06
2648 2722 8.579863 TCTAGGACATGACACATGTAATATCAG 58.420 37.037 15.70 8.74 31.52 2.90
2654 2728 8.668353 ACATGACACATGTAATATCAGTTCAAC 58.332 33.333 14.43 0.00 0.00 3.18
2752 2826 2.159043 AGTGTCCAATCATAGCTGACCG 60.159 50.000 0.00 0.00 33.22 4.79
2753 2827 2.107366 TGTCCAATCATAGCTGACCGA 58.893 47.619 0.00 0.00 33.22 4.69
2802 2876 1.334960 CGTCGTGCCATTTTGAAGCTT 60.335 47.619 0.00 0.00 0.00 3.74
2806 2880 0.602562 TGCCATTTTGAAGCTTCCCG 59.397 50.000 23.42 7.26 0.00 5.14
2809 2883 2.676076 CCATTTTGAAGCTTCCCGTTG 58.324 47.619 23.42 14.91 0.00 4.10
2810 2884 2.610232 CCATTTTGAAGCTTCCCGTTGG 60.610 50.000 23.42 19.30 0.00 3.77
2931 3005 2.571653 TCAGGCTATACACTTGTGGCTT 59.428 45.455 5.72 0.00 0.00 4.35
2954 3028 7.419634 GCTTACTCTAAAATTCCTGAGAGGGAT 60.420 40.741 8.05 0.00 39.84 3.85
2973 3047 4.202050 GGGATTGCAGAATGTTATGGTCAC 60.202 45.833 0.00 0.00 39.31 3.67
2978 3052 4.202441 GCAGAATGTTATGGTCACCTCAT 58.798 43.478 0.00 0.00 39.31 2.90
2983 3057 4.753516 TGTTATGGTCACCTCATGGTAG 57.246 45.455 0.00 0.00 46.60 3.18
3008 3082 6.882610 AGCACTCAATCAATCAAGTTAACA 57.117 33.333 8.61 0.00 0.00 2.41
3011 3085 7.013655 AGCACTCAATCAATCAAGTTAACACTT 59.986 33.333 8.61 0.00 44.72 3.16
3128 3202 7.984475 TGGTAATGTATGCCCTGAATAATACT 58.016 34.615 0.00 0.00 31.69 2.12
3227 3301 6.809869 TGTGTAATCATATCTGTCACTGGAG 58.190 40.000 0.00 0.00 0.00 3.86
3257 3331 5.290885 TGTTACTAATGCTATGCGTCACTTG 59.709 40.000 0.00 0.00 0.00 3.16
3263 3337 1.398041 GCTATGCGTCACTTGCAATGA 59.602 47.619 0.00 3.48 46.87 2.57
3284 3358 0.967380 CAATGGTGGGCAGAAGACCC 60.967 60.000 0.00 0.00 45.14 4.46
3340 3414 3.263681 AGGGTTTCCTTGTCTAACTAGGC 59.736 47.826 3.12 0.00 41.56 3.93
3374 3448 2.677902 GCCAGATTCTCATGTTGGTCGA 60.678 50.000 0.00 0.00 0.00 4.20
3380 3454 3.183793 TCTCATGTTGGTCGATCCATG 57.816 47.619 8.21 8.21 46.60 3.66
3419 3493 7.790782 ATTGGTTGTATAAGTTGAACCCATT 57.209 32.000 0.00 0.00 37.63 3.16
3488 3562 7.573968 AGTCTTGCAATATAATCCTTTGTCC 57.426 36.000 0.00 0.00 0.00 4.02
3580 3654 0.948678 GCCAAACAACTAACTCGCCA 59.051 50.000 0.00 0.00 0.00 5.69
3613 3687 2.282391 ATGGCTGCTTTGGACGCA 60.282 55.556 0.00 0.00 35.80 5.24
3734 3808 2.622942 GCTTGATGAAGTTGGTTGTCCA 59.377 45.455 0.00 0.00 42.66 4.02
3735 3809 3.304928 GCTTGATGAAGTTGGTTGTCCAG 60.305 47.826 0.00 0.00 45.22 3.86
3736 3810 3.576078 TGATGAAGTTGGTTGTCCAGT 57.424 42.857 0.00 0.00 45.22 4.00
3737 3811 3.897239 TGATGAAGTTGGTTGTCCAGTT 58.103 40.909 0.00 0.00 45.22 3.16
3738 3812 3.882888 TGATGAAGTTGGTTGTCCAGTTC 59.117 43.478 0.00 0.00 45.22 3.01
3739 3813 3.644966 TGAAGTTGGTTGTCCAGTTCT 57.355 42.857 10.54 0.66 45.22 3.01
3740 3814 3.963129 TGAAGTTGGTTGTCCAGTTCTT 58.037 40.909 10.54 6.90 45.22 2.52
3741 3815 3.945285 TGAAGTTGGTTGTCCAGTTCTTC 59.055 43.478 14.87 14.87 45.22 2.87
3742 3816 3.644966 AGTTGGTTGTCCAGTTCTTCA 57.355 42.857 0.00 0.00 45.22 3.02
3743 3817 3.963129 AGTTGGTTGTCCAGTTCTTCAA 58.037 40.909 0.00 0.00 45.22 2.69
3744 3818 3.694566 AGTTGGTTGTCCAGTTCTTCAAC 59.305 43.478 0.00 0.00 45.22 3.18
3824 3898 7.278868 GTCCTAGATCAACTTTCATTAGTGTGG 59.721 40.741 0.00 0.00 0.00 4.17
3833 3907 5.243730 ACTTTCATTAGTGTGGTGGAAATGG 59.756 40.000 0.00 0.00 0.00 3.16
3835 3909 4.331968 TCATTAGTGTGGTGGAAATGGTC 58.668 43.478 0.00 0.00 0.00 4.02
3862 3936 7.094975 CGTATTTATCACTGGTGGAACTCAAAA 60.095 37.037 0.70 0.00 36.74 2.44
3863 3937 6.385649 TTTATCACTGGTGGAACTCAAAAC 57.614 37.500 0.70 0.00 36.74 2.43
3864 3938 3.644966 TCACTGGTGGAACTCAAAACT 57.355 42.857 0.70 0.00 36.74 2.66
3865 3939 3.278574 TCACTGGTGGAACTCAAAACTG 58.721 45.455 0.70 0.00 36.74 3.16
3866 3940 3.054728 TCACTGGTGGAACTCAAAACTGA 60.055 43.478 0.70 0.00 36.74 3.41
3867 3941 3.065371 CACTGGTGGAACTCAAAACTGAC 59.935 47.826 0.00 0.00 36.74 3.51
3939 4017 2.808202 GCTCCACCAGGTATGTATGCTG 60.808 54.545 0.00 0.00 35.89 4.41
3942 4020 2.945008 CCACCAGGTATGTATGCTGTTG 59.055 50.000 0.00 0.00 0.00 3.33
3989 4078 4.553429 CCGCGTATTCTGAAAACATGTTTC 59.447 41.667 23.47 16.50 31.45 2.78
3994 4083 8.539674 GCGTATTCTGAAAACATGTTTCTTTTT 58.460 29.630 23.47 8.20 31.45 1.94
4017 4106 5.821516 ACATTTCAAAAACACGTCTGGTA 57.178 34.783 0.00 0.00 0.00 3.25
4021 4110 7.762159 ACATTTCAAAAACACGTCTGGTATTTT 59.238 29.630 0.00 0.00 31.01 1.82
4055 4147 1.967319 TCTGGTCTTTGTTGGCTCAC 58.033 50.000 0.00 0.00 0.00 3.51
4067 4159 0.392706 TGGCTCACGGTGCTATATGG 59.607 55.000 2.51 0.00 0.00 2.74
4092 4184 6.749036 TCTTCAGAACTAAAGGGTCTTCTT 57.251 37.500 0.00 0.00 40.55 2.52
4108 4200 5.221641 GGTCTTCTTGGCCCAGTTTTATTTT 60.222 40.000 0.00 0.00 33.37 1.82
4109 4201 6.014925 GGTCTTCTTGGCCCAGTTTTATTTTA 60.015 38.462 0.00 0.00 33.37 1.52
4110 4202 7.090808 GTCTTCTTGGCCCAGTTTTATTTTAG 58.909 38.462 0.00 0.00 0.00 1.85
4144 4236 6.192970 AGCCTAAGCCATAGACATTGTTAT 57.807 37.500 0.00 0.00 41.25 1.89
4160 4252 4.660789 TGTTATTTACTACTCCCTCCGC 57.339 45.455 0.00 0.00 0.00 5.54
4171 4263 2.158900 ACTCCCTCCGCTCACAAATATG 60.159 50.000 0.00 0.00 0.00 1.78
4186 4278 7.730084 TCACAAATATGAGATGTTCTAGAGGG 58.270 38.462 0.00 0.00 0.00 4.30
4187 4279 7.345653 TCACAAATATGAGATGTTCTAGAGGGT 59.654 37.037 0.00 0.00 0.00 4.34
4188 4280 7.440556 CACAAATATGAGATGTTCTAGAGGGTG 59.559 40.741 0.00 0.00 0.00 4.61
4189 4281 5.736951 ATATGAGATGTTCTAGAGGGTGC 57.263 43.478 0.00 0.00 0.00 5.01
4190 4282 3.107402 TGAGATGTTCTAGAGGGTGCT 57.893 47.619 0.00 0.00 0.00 4.40
4191 4283 3.445008 TGAGATGTTCTAGAGGGTGCTT 58.555 45.455 0.00 0.00 0.00 3.91
4192 4284 3.196469 TGAGATGTTCTAGAGGGTGCTTG 59.804 47.826 0.00 0.00 0.00 4.01
4193 4285 2.503356 AGATGTTCTAGAGGGTGCTTGG 59.497 50.000 0.00 0.00 0.00 3.61
4194 4286 2.024176 TGTTCTAGAGGGTGCTTGGA 57.976 50.000 0.00 0.00 0.00 3.53
4195 4287 2.551270 TGTTCTAGAGGGTGCTTGGAT 58.449 47.619 0.00 0.00 0.00 3.41
4196 4288 3.719871 TGTTCTAGAGGGTGCTTGGATA 58.280 45.455 0.00 0.00 0.00 2.59
4197 4289 3.451178 TGTTCTAGAGGGTGCTTGGATAC 59.549 47.826 0.00 0.00 0.00 2.24
4215 4307 7.684317 TGGATACATTTTAGTCCCATGACTA 57.316 36.000 0.00 0.00 46.95 2.59
4226 4318 4.514401 GTCCCATGACTAAAAGTAGTGGG 58.486 47.826 17.22 17.22 46.41 4.61
4229 4321 5.422214 CCATGACTAAAAGTAGTGGGACT 57.578 43.478 0.00 0.00 40.82 3.85
4230 4322 6.540438 CCATGACTAAAAGTAGTGGGACTA 57.460 41.667 0.00 0.00 40.82 2.59
4231 4323 6.942976 CCATGACTAAAAGTAGTGGGACTAA 58.057 40.000 0.00 0.00 40.82 2.24
4232 4324 7.391620 CCATGACTAAAAGTAGTGGGACTAAA 58.608 38.462 0.00 0.00 40.82 1.85
4233 4325 7.881232 CCATGACTAAAAGTAGTGGGACTAAAA 59.119 37.037 0.00 0.00 40.82 1.52
4234 4326 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
4235 4327 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
4236 4328 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
4237 4329 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
4238 4330 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
4239 4331 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
4240 4332 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
4241 4333 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
4242 4334 3.676093 AGTGGGACTAAAACTTGCTAGC 58.324 45.455 8.10 8.10 0.00 3.42
4243 4335 2.747989 GTGGGACTAAAACTTGCTAGCC 59.252 50.000 13.29 0.00 0.00 3.93
4244 4336 2.642807 TGGGACTAAAACTTGCTAGCCT 59.357 45.455 13.29 0.00 0.00 4.58
4245 4337 3.271729 GGGACTAAAACTTGCTAGCCTC 58.728 50.000 13.29 0.00 0.00 4.70
4246 4338 3.307480 GGGACTAAAACTTGCTAGCCTCA 60.307 47.826 13.29 0.00 0.00 3.86
4247 4339 3.935828 GGACTAAAACTTGCTAGCCTCAG 59.064 47.826 13.29 8.16 0.00 3.35
4248 4340 4.322801 GGACTAAAACTTGCTAGCCTCAGA 60.323 45.833 13.29 0.00 0.00 3.27
4249 4341 4.826556 ACTAAAACTTGCTAGCCTCAGAG 58.173 43.478 13.29 5.05 0.00 3.35
4250 4342 2.777832 AAACTTGCTAGCCTCAGAGG 57.222 50.000 12.81 12.81 38.80 3.69
4251 4343 0.908198 AACTTGCTAGCCTCAGAGGG 59.092 55.000 18.83 2.63 35.37 4.30
4257 4349 4.896979 AGCCTCAGAGGGTGCTTA 57.103 55.556 20.95 0.00 45.86 3.09
4258 4350 2.601664 AGCCTCAGAGGGTGCTTAG 58.398 57.895 20.95 0.00 45.86 2.18
4259 4351 0.041833 AGCCTCAGAGGGTGCTTAGA 59.958 55.000 20.95 0.00 45.86 2.10
4260 4352 1.127343 GCCTCAGAGGGTGCTTAGAT 58.873 55.000 18.83 0.00 35.37 1.98
4261 4353 1.069978 GCCTCAGAGGGTGCTTAGATC 59.930 57.143 18.83 0.00 35.37 2.75
4262 4354 1.691434 CCTCAGAGGGTGCTTAGATCC 59.309 57.143 8.88 0.00 0.00 3.36
4263 4355 2.392662 CTCAGAGGGTGCTTAGATCCA 58.607 52.381 0.00 0.00 0.00 3.41
4264 4356 2.768527 CTCAGAGGGTGCTTAGATCCAA 59.231 50.000 0.00 0.00 0.00 3.53
4265 4357 2.768527 TCAGAGGGTGCTTAGATCCAAG 59.231 50.000 0.00 0.00 0.00 3.61
4266 4358 2.122768 AGAGGGTGCTTAGATCCAAGG 58.877 52.381 3.00 0.00 0.00 3.61
4267 4359 1.141858 GAGGGTGCTTAGATCCAAGGG 59.858 57.143 3.00 0.00 0.00 3.95
4268 4360 1.213296 GGGTGCTTAGATCCAAGGGA 58.787 55.000 3.00 0.00 35.55 4.20
4269 4361 1.134068 GGGTGCTTAGATCCAAGGGAC 60.134 57.143 3.00 0.00 32.98 4.46
4307 4399 9.654663 TGACTAAAAATAGTCTCTTTAAGAGGC 57.345 33.333 17.87 17.87 46.94 4.70
4316 4408 6.971527 GTCTCTTTAAGAGGCTAAAGTTCC 57.028 41.667 18.21 0.00 43.38 3.62
4317 4409 6.465084 GTCTCTTTAAGAGGCTAAAGTTCCA 58.535 40.000 18.21 0.00 43.38 3.53
4318 4410 6.935208 GTCTCTTTAAGAGGCTAAAGTTCCAA 59.065 38.462 18.21 0.00 43.38 3.53
4319 4411 7.118535 GTCTCTTTAAGAGGCTAAAGTTCCAAG 59.881 40.741 18.21 0.00 43.38 3.61
4320 4412 5.705905 TCTTTAAGAGGCTAAAGTTCCAAGC 59.294 40.000 7.84 0.00 39.12 4.01
4321 4413 3.508845 AAGAGGCTAAAGTTCCAAGCA 57.491 42.857 0.00 0.00 38.01 3.91
4322 4414 2.784347 AGAGGCTAAAGTTCCAAGCAC 58.216 47.619 0.00 2.09 38.01 4.40
4323 4415 1.813178 GAGGCTAAAGTTCCAAGCACC 59.187 52.381 0.00 0.00 38.01 5.01
4324 4416 0.888619 GGCTAAAGTTCCAAGCACCC 59.111 55.000 7.02 0.00 38.01 4.61
4325 4417 1.547901 GGCTAAAGTTCCAAGCACCCT 60.548 52.381 7.02 0.00 38.01 4.34
4326 4418 2.239400 GCTAAAGTTCCAAGCACCCTT 58.761 47.619 0.00 0.00 36.26 3.95
4327 4419 2.029918 GCTAAAGTTCCAAGCACCCTTG 60.030 50.000 0.00 0.00 46.38 3.61
4337 4429 3.425162 AAGCACCCTTGACTAAAGAGG 57.575 47.619 0.00 0.00 38.24 3.69
4340 4432 3.884226 CCCTTGACTAAAGAGGGGC 57.116 57.895 0.00 0.00 45.27 5.80
4341 4433 1.290134 CCCTTGACTAAAGAGGGGCT 58.710 55.000 0.00 0.00 45.27 5.19
4342 4434 2.478292 CCCTTGACTAAAGAGGGGCTA 58.522 52.381 0.00 0.00 45.27 3.93
4343 4435 2.844348 CCCTTGACTAAAGAGGGGCTAA 59.156 50.000 0.00 0.00 45.27 3.09
4344 4436 3.265995 CCCTTGACTAAAGAGGGGCTAAA 59.734 47.826 0.00 0.00 45.27 1.85
4345 4437 4.263771 CCCTTGACTAAAGAGGGGCTAAAA 60.264 45.833 0.00 0.00 45.27 1.52
4346 4438 4.700692 CCTTGACTAAAGAGGGGCTAAAAC 59.299 45.833 0.00 0.00 38.24 2.43
4347 4439 5.515008 CCTTGACTAAAGAGGGGCTAAAACT 60.515 44.000 0.00 0.00 38.24 2.66
4348 4440 6.296259 CCTTGACTAAAGAGGGGCTAAAACTA 60.296 42.308 0.00 0.00 38.24 2.24
4349 4441 6.295719 TGACTAAAGAGGGGCTAAAACTAG 57.704 41.667 0.00 0.00 0.00 2.57
4350 4442 5.783875 TGACTAAAGAGGGGCTAAAACTAGT 59.216 40.000 0.00 0.00 0.00 2.57
4351 4443 6.070938 TGACTAAAGAGGGGCTAAAACTAGTC 60.071 42.308 0.00 0.00 0.00 2.59
4352 4444 6.024247 ACTAAAGAGGGGCTAAAACTAGTCT 58.976 40.000 0.00 0.00 0.00 3.24
4353 4445 5.844773 AAAGAGGGGCTAAAACTAGTCTT 57.155 39.130 0.00 0.00 0.00 3.01
4354 4446 4.828072 AGAGGGGCTAAAACTAGTCTTG 57.172 45.455 0.00 0.00 0.00 3.02
4355 4447 4.426704 AGAGGGGCTAAAACTAGTCTTGA 58.573 43.478 0.00 0.00 0.00 3.02
4356 4448 4.468153 AGAGGGGCTAAAACTAGTCTTGAG 59.532 45.833 0.00 0.00 0.00 3.02
4357 4449 4.426704 AGGGGCTAAAACTAGTCTTGAGA 58.573 43.478 0.00 0.00 0.00 3.27
4358 4450 4.223255 AGGGGCTAAAACTAGTCTTGAGAC 59.777 45.833 0.00 2.93 45.08 3.36
4382 4474 7.444629 CTAAAAACTTTTAGTCAGGGGTACC 57.555 40.000 2.17 2.17 45.11 3.34
4411 4503 6.917217 CAAAATGTGGATTAGTCCTCTCTC 57.083 41.667 5.79 0.00 45.32 3.20
4412 4504 6.648192 CAAAATGTGGATTAGTCCTCTCTCT 58.352 40.000 5.79 0.00 45.32 3.10
4413 4505 6.478512 AAATGTGGATTAGTCCTCTCTCTC 57.521 41.667 5.79 0.00 45.32 3.20
4414 4506 3.904717 TGTGGATTAGTCCTCTCTCTCC 58.095 50.000 5.79 0.00 45.32 3.71
4415 4507 3.529734 TGTGGATTAGTCCTCTCTCTCCT 59.470 47.826 5.79 0.00 45.32 3.69
4416 4508 4.142038 GTGGATTAGTCCTCTCTCTCCTC 58.858 52.174 5.79 0.00 45.32 3.71
4417 4509 3.788708 TGGATTAGTCCTCTCTCTCCTCA 59.211 47.826 5.79 0.00 45.32 3.86
4418 4510 4.418526 TGGATTAGTCCTCTCTCTCCTCAT 59.581 45.833 5.79 0.00 45.32 2.90
4419 4511 5.103301 TGGATTAGTCCTCTCTCTCCTCATT 60.103 44.000 5.79 0.00 45.32 2.57
4420 4512 5.838521 GGATTAGTCCTCTCTCTCCTCATTT 59.161 44.000 0.00 0.00 41.60 2.32
4421 4513 7.007723 GGATTAGTCCTCTCTCTCCTCATTTA 58.992 42.308 0.00 0.00 41.60 1.40
4422 4514 7.507616 GGATTAGTCCTCTCTCTCCTCATTTAA 59.492 40.741 0.00 0.00 41.60 1.52
4423 4515 7.648039 TTAGTCCTCTCTCTCCTCATTTAAC 57.352 40.000 0.00 0.00 0.00 2.01
4424 4516 5.837829 AGTCCTCTCTCTCCTCATTTAACT 58.162 41.667 0.00 0.00 0.00 2.24
4425 4517 5.891551 AGTCCTCTCTCTCCTCATTTAACTC 59.108 44.000 0.00 0.00 0.00 3.01
4426 4518 5.068591 GTCCTCTCTCTCCTCATTTAACTCC 59.931 48.000 0.00 0.00 0.00 3.85
4427 4519 5.043732 TCCTCTCTCTCCTCATTTAACTCCT 60.044 44.000 0.00 0.00 0.00 3.69
4428 4520 5.301805 CCTCTCTCTCCTCATTTAACTCCTC 59.698 48.000 0.00 0.00 0.00 3.71
4429 4521 6.086011 TCTCTCTCCTCATTTAACTCCTCT 57.914 41.667 0.00 0.00 0.00 3.69
4430 4522 6.126409 TCTCTCTCCTCATTTAACTCCTCTC 58.874 44.000 0.00 0.00 0.00 3.20
4431 4523 5.205056 TCTCTCCTCATTTAACTCCTCTCC 58.795 45.833 0.00 0.00 0.00 3.71
4432 4524 5.043732 TCTCTCCTCATTTAACTCCTCTCCT 60.044 44.000 0.00 0.00 0.00 3.69
4433 4525 5.594777 TCTCCTCATTTAACTCCTCTCCTT 58.405 41.667 0.00 0.00 0.00 3.36
4434 4526 6.026186 TCTCCTCATTTAACTCCTCTCCTTT 58.974 40.000 0.00 0.00 0.00 3.11
4435 4527 7.189794 TCTCCTCATTTAACTCCTCTCCTTTA 58.810 38.462 0.00 0.00 0.00 1.85
4436 4528 7.678598 TCTCCTCATTTAACTCCTCTCCTTTAA 59.321 37.037 0.00 0.00 0.00 1.52
4437 4529 7.621796 TCCTCATTTAACTCCTCTCCTTTAAC 58.378 38.462 0.00 0.00 0.00 2.01
4438 4530 7.236847 TCCTCATTTAACTCCTCTCCTTTAACA 59.763 37.037 0.00 0.00 0.00 2.41
4439 4531 7.334671 CCTCATTTAACTCCTCTCCTTTAACAC 59.665 40.741 0.00 0.00 0.00 3.32
4440 4532 7.741785 TCATTTAACTCCTCTCCTTTAACACA 58.258 34.615 0.00 0.00 0.00 3.72
4441 4533 8.383175 TCATTTAACTCCTCTCCTTTAACACAT 58.617 33.333 0.00 0.00 0.00 3.21
4442 4534 7.979444 TTTAACTCCTCTCCTTTAACACATG 57.021 36.000 0.00 0.00 0.00 3.21
4443 4535 3.944087 ACTCCTCTCCTTTAACACATGC 58.056 45.455 0.00 0.00 0.00 4.06
4444 4536 2.932614 CTCCTCTCCTTTAACACATGCG 59.067 50.000 0.00 0.00 0.00 4.73
4445 4537 2.565391 TCCTCTCCTTTAACACATGCGA 59.435 45.455 0.00 0.00 0.00 5.10
4446 4538 2.932614 CCTCTCCTTTAACACATGCGAG 59.067 50.000 0.00 0.00 0.00 5.03
4447 4539 3.589988 CTCTCCTTTAACACATGCGAGT 58.410 45.455 0.00 0.00 0.00 4.18
4448 4540 3.997021 CTCTCCTTTAACACATGCGAGTT 59.003 43.478 0.00 0.00 0.00 3.01
4449 4541 4.385825 TCTCCTTTAACACATGCGAGTTT 58.614 39.130 4.42 0.00 0.00 2.66
4450 4542 4.819630 TCTCCTTTAACACATGCGAGTTTT 59.180 37.500 4.42 0.00 0.00 2.43
4451 4543 4.854399 TCCTTTAACACATGCGAGTTTTG 58.146 39.130 4.42 0.00 0.00 2.44
4452 4544 3.980775 CCTTTAACACATGCGAGTTTTGG 59.019 43.478 4.42 2.44 0.00 3.28
4453 4545 4.261405 CCTTTAACACATGCGAGTTTTGGA 60.261 41.667 4.42 0.00 0.00 3.53
4454 4546 5.446143 TTTAACACATGCGAGTTTTGGAT 57.554 34.783 4.42 0.00 0.00 3.41
4455 4547 5.446143 TTAACACATGCGAGTTTTGGATT 57.554 34.783 4.42 0.00 0.00 3.01
4456 4548 3.287312 ACACATGCGAGTTTTGGATTG 57.713 42.857 0.00 0.00 0.00 2.67
4457 4549 2.030007 ACACATGCGAGTTTTGGATTGG 60.030 45.455 0.00 0.00 0.00 3.16
4458 4550 2.228582 CACATGCGAGTTTTGGATTGGA 59.771 45.455 0.00 0.00 0.00 3.53
4459 4551 2.489329 ACATGCGAGTTTTGGATTGGAG 59.511 45.455 0.00 0.00 0.00 3.86
4460 4552 1.533625 TGCGAGTTTTGGATTGGAGG 58.466 50.000 0.00 0.00 0.00 4.30
4461 4553 0.811281 GCGAGTTTTGGATTGGAGGG 59.189 55.000 0.00 0.00 0.00 4.30
4462 4554 1.886655 GCGAGTTTTGGATTGGAGGGT 60.887 52.381 0.00 0.00 0.00 4.34
4463 4555 2.514803 CGAGTTTTGGATTGGAGGGTT 58.485 47.619 0.00 0.00 0.00 4.11
4464 4556 2.890945 CGAGTTTTGGATTGGAGGGTTT 59.109 45.455 0.00 0.00 0.00 3.27
4465 4557 3.305335 CGAGTTTTGGATTGGAGGGTTTG 60.305 47.826 0.00 0.00 0.00 2.93
4466 4558 2.972021 AGTTTTGGATTGGAGGGTTTGG 59.028 45.455 0.00 0.00 0.00 3.28
4467 4559 2.969262 GTTTTGGATTGGAGGGTTTGGA 59.031 45.455 0.00 0.00 0.00 3.53
4468 4560 2.603075 TTGGATTGGAGGGTTTGGAG 57.397 50.000 0.00 0.00 0.00 3.86
4469 4561 0.704076 TGGATTGGAGGGTTTGGAGG 59.296 55.000 0.00 0.00 0.00 4.30
4470 4562 0.999712 GGATTGGAGGGTTTGGAGGA 59.000 55.000 0.00 0.00 0.00 3.71
4471 4563 1.570979 GGATTGGAGGGTTTGGAGGAT 59.429 52.381 0.00 0.00 0.00 3.24
4472 4564 2.783510 GGATTGGAGGGTTTGGAGGATA 59.216 50.000 0.00 0.00 0.00 2.59
4473 4565 3.204382 GGATTGGAGGGTTTGGAGGATAA 59.796 47.826 0.00 0.00 0.00 1.75
4474 4566 4.140924 GGATTGGAGGGTTTGGAGGATAAT 60.141 45.833 0.00 0.00 0.00 1.28
4475 4567 5.074515 GGATTGGAGGGTTTGGAGGATAATA 59.925 44.000 0.00 0.00 0.00 0.98
4476 4568 6.411554 GGATTGGAGGGTTTGGAGGATAATAA 60.412 42.308 0.00 0.00 0.00 1.40
4477 4569 6.410222 TTGGAGGGTTTGGAGGATAATAAA 57.590 37.500 0.00 0.00 0.00 1.40
4478 4570 6.606241 TGGAGGGTTTGGAGGATAATAAAT 57.394 37.500 0.00 0.00 0.00 1.40
4479 4571 6.372931 TGGAGGGTTTGGAGGATAATAAATG 58.627 40.000 0.00 0.00 0.00 2.32
4480 4572 5.243954 GGAGGGTTTGGAGGATAATAAATGC 59.756 44.000 0.00 0.00 0.00 3.56
4481 4573 6.030727 AGGGTTTGGAGGATAATAAATGCT 57.969 37.500 0.00 0.00 0.00 3.79
4482 4574 6.071320 AGGGTTTGGAGGATAATAAATGCTC 58.929 40.000 0.00 0.00 36.02 4.26
4483 4575 5.833131 GGGTTTGGAGGATAATAAATGCTCA 59.167 40.000 8.48 0.00 38.10 4.26
4484 4576 6.494835 GGGTTTGGAGGATAATAAATGCTCAT 59.505 38.462 8.48 0.00 38.10 2.90
4485 4577 7.015584 GGGTTTGGAGGATAATAAATGCTCATT 59.984 37.037 8.48 0.00 38.10 2.57
4486 4578 9.077885 GGTTTGGAGGATAATAAATGCTCATTA 57.922 33.333 8.48 0.00 38.10 1.90
4489 4581 9.866655 TTGGAGGATAATAAATGCTCATTAACT 57.133 29.630 8.48 0.00 38.10 2.24
4490 4582 9.866655 TGGAGGATAATAAATGCTCATTAACTT 57.133 29.630 8.48 0.00 38.10 2.66
4503 4595 9.678260 ATGCTCATTAACTTGATTTTAGTCTCT 57.322 29.630 0.00 0.00 0.00 3.10
4520 4612 6.168270 AGTCTCTAGTATTTGGATCCAAGC 57.832 41.667 25.69 19.18 37.24 4.01
4521 4613 5.663106 AGTCTCTAGTATTTGGATCCAAGCA 59.337 40.000 25.69 14.00 37.24 3.91
4522 4614 6.328672 AGTCTCTAGTATTTGGATCCAAGCAT 59.671 38.462 25.69 19.69 37.24 3.79
4523 4615 6.426328 GTCTCTAGTATTTGGATCCAAGCATG 59.574 42.308 25.69 15.16 37.24 4.06
4532 4624 1.578215 ATCCAAGCATGGGTGAGGCT 61.578 55.000 8.36 0.00 45.93 4.58
4533 4625 0.913934 TCCAAGCATGGGTGAGGCTA 60.914 55.000 8.36 0.00 42.15 3.93
4534 4626 0.465097 CCAAGCATGGGTGAGGCTAG 60.465 60.000 0.00 0.00 42.15 3.42
4535 4627 1.099879 CAAGCATGGGTGAGGCTAGC 61.100 60.000 6.04 6.04 42.15 3.42
4536 4628 1.565390 AAGCATGGGTGAGGCTAGCA 61.565 55.000 18.24 0.00 42.15 3.49
4537 4629 1.077501 GCATGGGTGAGGCTAGCAA 60.078 57.895 18.24 0.00 0.00 3.91
4538 4630 1.099879 GCATGGGTGAGGCTAGCAAG 61.100 60.000 18.24 0.00 0.00 4.01
4539 4631 0.254178 CATGGGTGAGGCTAGCAAGT 59.746 55.000 18.24 0.00 0.00 3.16
4540 4632 0.995024 ATGGGTGAGGCTAGCAAGTT 59.005 50.000 18.24 0.00 0.00 2.66
4541 4633 0.771127 TGGGTGAGGCTAGCAAGTTT 59.229 50.000 18.24 0.00 0.00 2.66
4542 4634 1.144913 TGGGTGAGGCTAGCAAGTTTT 59.855 47.619 18.24 0.00 0.00 2.43
4543 4635 2.373836 TGGGTGAGGCTAGCAAGTTTTA 59.626 45.455 18.24 0.00 0.00 1.52
4544 4636 3.010420 GGGTGAGGCTAGCAAGTTTTAG 58.990 50.000 18.24 0.00 0.00 1.85
4545 4637 3.559384 GGGTGAGGCTAGCAAGTTTTAGT 60.559 47.826 18.24 0.00 0.00 2.24
4546 4638 3.685272 GGTGAGGCTAGCAAGTTTTAGTC 59.315 47.826 18.24 0.00 0.00 2.59
4547 4639 3.685272 GTGAGGCTAGCAAGTTTTAGTCC 59.315 47.826 18.24 0.00 0.00 3.85
4548 4640 3.271729 GAGGCTAGCAAGTTTTAGTCCC 58.728 50.000 18.24 0.00 0.00 4.46
4549 4641 2.642807 AGGCTAGCAAGTTTTAGTCCCA 59.357 45.455 18.24 0.00 0.00 4.37
4550 4642 2.747989 GGCTAGCAAGTTTTAGTCCCAC 59.252 50.000 18.24 0.00 0.00 4.61
4551 4643 3.559384 GGCTAGCAAGTTTTAGTCCCACT 60.559 47.826 18.24 0.00 0.00 4.00
4552 4644 4.323257 GGCTAGCAAGTTTTAGTCCCACTA 60.323 45.833 18.24 0.00 0.00 2.74
4553 4645 4.630505 GCTAGCAAGTTTTAGTCCCACTAC 59.369 45.833 10.63 0.00 28.93 2.73
4554 4646 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
4555 4647 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
4556 4648 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
4557 4649 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
4558 4650 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
4559 4651 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
4560 4652 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
4561 4653 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
4562 4654 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
4563 4655 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
4564 4656 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
4565 4657 5.422214 AGTCCCACTACTTTTAGTCATGG 57.578 43.478 0.00 0.00 36.31 3.66
4566 4658 4.225267 AGTCCCACTACTTTTAGTCATGGG 59.775 45.833 16.70 16.70 46.94 4.00
4581 4673 4.761975 GTCATGGGACTAAAACGTATCCA 58.238 43.478 0.00 0.00 40.99 3.41
4582 4674 5.180271 GTCATGGGACTAAAACGTATCCAA 58.820 41.667 0.00 0.00 40.99 3.53
4583 4675 5.293569 GTCATGGGACTAAAACGTATCCAAG 59.706 44.000 0.00 0.00 40.99 3.61
4584 4676 3.602483 TGGGACTAAAACGTATCCAAGC 58.398 45.455 0.00 0.00 32.45 4.01
4585 4677 3.008157 TGGGACTAAAACGTATCCAAGCA 59.992 43.478 0.00 0.00 32.45 3.91
4586 4678 3.373130 GGGACTAAAACGTATCCAAGCAC 59.627 47.826 0.00 0.00 32.45 4.40
4587 4679 3.373130 GGACTAAAACGTATCCAAGCACC 59.627 47.826 0.00 0.00 0.00 5.01
4588 4680 3.340928 ACTAAAACGTATCCAAGCACCC 58.659 45.455 0.00 0.00 0.00 4.61
4589 4681 2.579410 AAAACGTATCCAAGCACCCT 57.421 45.000 0.00 0.00 0.00 4.34
4590 4682 2.109425 AAACGTATCCAAGCACCCTC 57.891 50.000 0.00 0.00 0.00 4.30
4591 4683 1.276622 AACGTATCCAAGCACCCTCT 58.723 50.000 0.00 0.00 0.00 3.69
4592 4684 0.824759 ACGTATCCAAGCACCCTCTC 59.175 55.000 0.00 0.00 0.00 3.20
4593 4685 0.824109 CGTATCCAAGCACCCTCTCA 59.176 55.000 0.00 0.00 0.00 3.27
4594 4686 1.471676 CGTATCCAAGCACCCTCTCAC 60.472 57.143 0.00 0.00 0.00 3.51
4595 4687 1.134371 GTATCCAAGCACCCTCTCACC 60.134 57.143 0.00 0.00 0.00 4.02
4596 4688 1.566298 ATCCAAGCACCCTCTCACCC 61.566 60.000 0.00 0.00 0.00 4.61
4597 4689 2.528818 CCAAGCACCCTCTCACCCA 61.529 63.158 0.00 0.00 0.00 4.51
4598 4690 1.687612 CAAGCACCCTCTCACCCAT 59.312 57.895 0.00 0.00 0.00 4.00
4599 4691 0.679002 CAAGCACCCTCTCACCCATG 60.679 60.000 0.00 0.00 0.00 3.66
4600 4692 2.439156 GCACCCTCTCACCCATGC 60.439 66.667 0.00 0.00 0.00 4.06
4601 4693 2.976490 GCACCCTCTCACCCATGCT 61.976 63.158 0.00 0.00 0.00 3.79
4602 4694 1.687612 CACCCTCTCACCCATGCTT 59.312 57.895 0.00 0.00 0.00 3.91
4603 4695 0.679002 CACCCTCTCACCCATGCTTG 60.679 60.000 0.00 0.00 0.00 4.01
4604 4696 1.077212 CCCTCTCACCCATGCTTGG 60.077 63.158 11.68 11.68 43.23 3.61
4605 4697 1.565390 CCCTCTCACCCATGCTTGGA 61.565 60.000 19.85 0.00 46.92 3.53
4606 4698 0.549950 CCTCTCACCCATGCTTGGAT 59.450 55.000 19.85 0.00 46.92 3.41
4607 4699 1.476471 CCTCTCACCCATGCTTGGATC 60.476 57.143 19.85 0.00 46.92 3.36
4608 4700 0.548031 TCTCACCCATGCTTGGATCC 59.452 55.000 19.85 4.20 46.92 3.36
4609 4701 0.256752 CTCACCCATGCTTGGATCCA 59.743 55.000 19.85 11.44 46.92 3.41
4610 4702 0.703488 TCACCCATGCTTGGATCCAA 59.297 50.000 25.53 25.53 46.92 3.53
4611 4703 1.076841 TCACCCATGCTTGGATCCAAA 59.923 47.619 26.87 14.63 46.92 3.28
4612 4704 2.112998 CACCCATGCTTGGATCCAAAT 58.887 47.619 26.87 16.27 46.92 2.32
4613 4705 3.053019 TCACCCATGCTTGGATCCAAATA 60.053 43.478 26.87 18.63 46.92 1.40
4614 4706 3.068590 CACCCATGCTTGGATCCAAATAC 59.931 47.826 26.87 19.00 46.92 1.89
4615 4707 3.052642 ACCCATGCTTGGATCCAAATACT 60.053 43.478 26.87 10.16 46.92 2.12
4616 4708 4.167892 ACCCATGCTTGGATCCAAATACTA 59.832 41.667 26.87 12.31 46.92 1.82
4617 4709 5.139727 CCCATGCTTGGATCCAAATACTAA 58.860 41.667 26.87 10.11 46.92 2.24
4618 4710 5.598005 CCCATGCTTGGATCCAAATACTAAA 59.402 40.000 26.87 8.81 46.92 1.85
4619 4711 6.239120 CCCATGCTTGGATCCAAATACTAAAG 60.239 42.308 26.87 14.21 46.92 1.85
4620 4712 6.547141 CCATGCTTGGATCCAAATACTAAAGA 59.453 38.462 26.87 1.90 46.92 2.52
4621 4713 7.255381 CCATGCTTGGATCCAAATACTAAAGAG 60.255 40.741 26.87 12.80 46.92 2.85
4622 4714 6.957631 TGCTTGGATCCAAATACTAAAGAGA 58.042 36.000 26.87 1.15 35.33 3.10
4623 4715 6.823689 TGCTTGGATCCAAATACTAAAGAGAC 59.176 38.462 26.87 8.83 35.33 3.36
4624 4716 7.051000 GCTTGGATCCAAATACTAAAGAGACT 58.949 38.462 26.87 0.00 35.33 3.24
4625 4717 8.204836 GCTTGGATCCAAATACTAAAGAGACTA 58.795 37.037 26.87 0.00 35.33 2.59
4643 4735 9.507329 AAGAGACTAAAATCAAGTTAATGAGCA 57.493 29.630 0.00 0.00 31.76 4.26
4644 4736 9.678260 AGAGACTAAAATCAAGTTAATGAGCAT 57.322 29.630 0.00 0.00 31.76 3.79
4657 4749 9.866655 AAGTTAATGAGCATTTATTATCCTCCA 57.133 29.630 0.52 0.00 32.50 3.86
4658 4750 9.866655 AGTTAATGAGCATTTATTATCCTCCAA 57.133 29.630 0.52 0.00 32.50 3.53
4661 4753 6.959639 TGAGCATTTATTATCCTCCAAACC 57.040 37.500 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
201 202 6.643388 TCATGTACATGCATAAGAACAGTCT 58.357 36.000 27.71 0.00 38.65 3.24
203 204 7.201758 CCATTCATGTACATGCATAAGAACAGT 60.202 37.037 27.71 4.55 38.65 3.55
208 209 5.131784 TGCCATTCATGTACATGCATAAGA 58.868 37.500 27.71 9.51 38.65 2.10
253 254 3.627237 GCTCATCCACCTTGGGGATTTTA 60.627 47.826 0.00 0.00 44.49 1.52
270 271 2.097825 GTTCCCATCTTTGCTGCTCAT 58.902 47.619 0.00 0.00 0.00 2.90
308 309 2.809665 GCTCCATCCGCTTGATCTTCAT 60.810 50.000 0.00 0.00 0.00 2.57
316 317 1.442526 GACATGGCTCCATCCGCTTG 61.443 60.000 0.00 0.00 33.90 4.01
341 343 1.377333 CCTCCTCCTTTTCCGCCAC 60.377 63.158 0.00 0.00 0.00 5.01
360 362 1.289231 TGATCCCTGAGCACTACTCCT 59.711 52.381 0.00 0.00 45.61 3.69
395 397 1.172812 AAAAACACAGGCTCCCGCTC 61.173 55.000 0.00 0.00 36.09 5.03
416 418 4.227134 CATCCGCGACCTGAGGGG 62.227 72.222 8.23 0.00 42.33 4.79
454 456 0.395586 TGCAGTGCCTTCTTGGTTGT 60.396 50.000 13.72 0.00 38.35 3.32
482 484 3.226346 TCTTCCTGACGTTGTATTCCG 57.774 47.619 0.00 0.00 0.00 4.30
517 519 8.806429 ATCATATTCACAACCATTTGACAGTA 57.194 30.769 0.00 0.00 36.48 2.74
574 576 1.276421 CACTTTCCAGATCCACGGTCT 59.724 52.381 0.00 0.00 0.00 3.85
612 614 3.000727 CGTAACCTTCGCTTCCTCAAAT 58.999 45.455 0.00 0.00 0.00 2.32
682 684 6.703607 ACATTGCTTATTTCATCTCCTACTCG 59.296 38.462 0.00 0.00 0.00 4.18
760 762 7.466320 GCTCCGCTTTATTTAATTAAGGTTCGA 60.466 37.037 5.95 0.00 0.00 3.71
802 807 2.171870 TCCCTTCGTGACTGGTCTTTTT 59.828 45.455 2.38 0.00 0.00 1.94
803 808 1.766496 TCCCTTCGTGACTGGTCTTTT 59.234 47.619 2.38 0.00 0.00 2.27
804 809 1.344763 CTCCCTTCGTGACTGGTCTTT 59.655 52.381 2.38 0.00 0.00 2.52
805 810 0.969894 CTCCCTTCGTGACTGGTCTT 59.030 55.000 2.38 0.00 0.00 3.01
806 811 0.900647 CCTCCCTTCGTGACTGGTCT 60.901 60.000 2.38 0.00 0.00 3.85
807 812 1.592223 CCTCCCTTCGTGACTGGTC 59.408 63.158 0.00 0.00 0.00 4.02
808 813 1.913762 CCCTCCCTTCGTGACTGGT 60.914 63.158 0.00 0.00 0.00 4.00
809 814 2.982130 CCCTCCCTTCGTGACTGG 59.018 66.667 0.00 0.00 0.00 4.00
810 815 2.266055 GCCCTCCCTTCGTGACTG 59.734 66.667 0.00 0.00 0.00 3.51
811 816 2.120718 AGCCCTCCCTTCGTGACT 59.879 61.111 0.00 0.00 0.00 3.41
812 817 2.266055 CAGCCCTCCCTTCGTGAC 59.734 66.667 0.00 0.00 0.00 3.67
813 818 2.203788 ACAGCCCTCCCTTCGTGA 60.204 61.111 0.00 0.00 0.00 4.35
814 819 2.266055 GACAGCCCTCCCTTCGTG 59.734 66.667 0.00 0.00 0.00 4.35
815 820 2.203788 TGACAGCCCTCCCTTCGT 60.204 61.111 0.00 0.00 0.00 3.85
816 821 2.581354 CTGACAGCCCTCCCTTCG 59.419 66.667 0.00 0.00 0.00 3.79
817 822 2.270527 GCTGACAGCCCTCCCTTC 59.729 66.667 17.01 0.00 34.48 3.46
826 831 0.671781 AATCGTGACAGGCTGACAGC 60.672 55.000 23.66 19.55 41.46 4.40
827 832 1.073964 CAATCGTGACAGGCTGACAG 58.926 55.000 23.66 14.51 0.00 3.51
828 833 0.950555 GCAATCGTGACAGGCTGACA 60.951 55.000 23.66 19.30 0.00 3.58
829 834 0.671781 AGCAATCGTGACAGGCTGAC 60.672 55.000 23.66 16.47 32.76 3.51
830 835 1.673477 AGCAATCGTGACAGGCTGA 59.327 52.632 23.66 0.00 32.76 4.26
831 836 1.792301 CAGCAATCGTGACAGGCTG 59.208 57.895 14.16 14.16 44.91 4.85
832 837 1.376424 CCAGCAATCGTGACAGGCT 60.376 57.895 0.00 0.00 34.64 4.58
833 838 1.639298 GACCAGCAATCGTGACAGGC 61.639 60.000 0.00 0.00 0.00 4.85
834 839 0.036952 AGACCAGCAATCGTGACAGG 60.037 55.000 0.00 0.00 0.00 4.00
835 840 2.654749 TAGACCAGCAATCGTGACAG 57.345 50.000 0.00 0.00 0.00 3.51
836 841 2.611971 GGTTAGACCAGCAATCGTGACA 60.612 50.000 0.00 0.00 38.42 3.58
837 842 2.000447 GGTTAGACCAGCAATCGTGAC 59.000 52.381 0.00 0.00 38.42 3.67
902 907 8.834465 GTCGTAGGTCAATGAATCTTACTAGTA 58.166 37.037 0.00 0.00 0.00 1.82
911 916 3.766151 TCGTGTCGTAGGTCAATGAATC 58.234 45.455 0.00 0.00 0.00 2.52
1500 1518 1.414061 CCTCCTCCATGGCGGAATCT 61.414 60.000 23.57 0.00 45.75 2.40
1503 1521 3.089874 CCCTCCTCCATGGCGGAA 61.090 66.667 23.57 8.57 45.75 4.30
1548 1566 1.512926 GCCGATGGATGATGTACACC 58.487 55.000 0.00 0.00 0.00 4.16
1611 1629 4.540099 ACAACCTGGATCTTAGGATTGGAA 59.460 41.667 19.22 0.00 38.71 3.53
1689 1707 0.771755 AGTTCTTGACCTTGACCCCC 59.228 55.000 0.00 0.00 0.00 5.40
1740 1758 1.746991 GGCAAAGAAGAGCCCGGAG 60.747 63.158 0.73 0.00 45.18 4.63
1866 1884 1.588082 CACATCCCCAGCAGCAAAC 59.412 57.895 0.00 0.00 0.00 2.93
1908 1926 1.009829 CTGAACCAGCGGCAGTAATC 58.990 55.000 1.45 0.00 0.00 1.75
2145 2217 6.093495 TCCCAGAATGTAGCGAACTAATTTTG 59.907 38.462 0.00 0.00 0.00 2.44
2172 2244 1.203038 TGGGCATCAACAGTCCAACAT 60.203 47.619 0.00 0.00 0.00 2.71
2186 2258 0.896940 CTGTCAGCAGGTTTGGGCAT 60.897 55.000 0.00 0.00 39.01 4.40
2205 2277 4.202388 TGGAAACAGTAAGGTGTCCCTAAC 60.202 45.833 0.30 0.00 43.43 2.34
2245 2317 6.600246 ACTCTTACGAAAAAGGAAACTGAC 57.400 37.500 0.00 0.00 42.68 3.51
2260 2332 4.421948 CTGCTACCAAGGTTACTCTTACG 58.578 47.826 0.00 0.00 0.00 3.18
2261 2333 4.382793 CCCTGCTACCAAGGTTACTCTTAC 60.383 50.000 0.00 0.00 0.00 2.34
2305 2378 4.947388 GCTGTTAGACCCATGGTTTATTCA 59.053 41.667 11.73 2.62 35.25 2.57
2334 2408 6.961554 CGTTCTGGTACATATTTTCTGCTTTC 59.038 38.462 0.00 0.00 38.20 2.62
2447 2521 0.675633 GAGCACCCATGTTTTGCAGT 59.324 50.000 11.67 0.00 38.81 4.40
2591 2665 3.634397 TTACAATCTGGAGCTGAAGGG 57.366 47.619 0.00 0.00 0.00 3.95
2631 2705 7.334171 CCTGTTGAACTGATATTACATGTGTCA 59.666 37.037 9.11 6.73 0.00 3.58
2648 2722 6.700081 GGAAACTAATGAAAACCCTGTTGAAC 59.300 38.462 0.00 0.00 0.00 3.18
2654 2728 4.416516 AGGGGAAACTAATGAAAACCCTG 58.583 43.478 0.00 0.00 45.16 4.45
2710 2784 5.579904 CACTAGTCAGATCATTTGTGACAGG 59.420 44.000 12.87 8.10 42.59 4.00
2712 2786 6.101650 ACACTAGTCAGATCATTTGTGACA 57.898 37.500 12.87 0.00 42.59 3.58
2713 2787 5.578727 GGACACTAGTCAGATCATTTGTGAC 59.421 44.000 0.00 4.32 46.80 3.67
2726 2800 4.956075 TCAGCTATGATTGGACACTAGTCA 59.044 41.667 0.00 0.00 46.80 3.41
2752 2826 7.881775 ATTACACCCAGTTCAATAATTCCTC 57.118 36.000 0.00 0.00 0.00 3.71
2753 2827 8.664669 AAATTACACCCAGTTCAATAATTCCT 57.335 30.769 0.00 0.00 0.00 3.36
2810 2884 5.333566 TGAATATTTCCCTTGTATCCCCC 57.666 43.478 0.00 0.00 0.00 5.40
2826 2900 9.632638 AGCACCTGAAACTAATTACATGAATAT 57.367 29.630 0.00 0.00 0.00 1.28
2878 2952 4.931661 TCTAACCTAAATAGAGGGCACG 57.068 45.455 0.00 0.00 41.36 5.34
2931 3005 7.635971 GCAATCCCTCTCAGGAATTTTAGAGTA 60.636 40.741 0.00 0.00 40.04 2.59
2954 3028 4.009675 GAGGTGACCATAACATTCTGCAA 58.990 43.478 3.63 0.00 0.00 4.08
2973 3047 4.100035 TGATTGAGTGCTACTACCATGAGG 59.900 45.833 0.00 0.00 42.21 3.86
2978 3052 5.675684 TGATTGATTGAGTGCTACTACCA 57.324 39.130 0.00 0.00 0.00 3.25
2983 3057 7.746475 GTGTTAACTTGATTGATTGAGTGCTAC 59.254 37.037 7.22 0.00 0.00 3.58
3041 3115 6.349300 TCCTAGGCTGACAGACAAATATTTC 58.651 40.000 11.83 0.00 0.00 2.17
3044 3118 6.328672 AGAATCCTAGGCTGACAGACAAATAT 59.671 38.462 11.83 0.00 0.00 1.28
3052 3126 2.364970 CCTGAGAATCCTAGGCTGACAG 59.635 54.545 2.96 9.43 0.00 3.51
3053 3127 2.292521 ACCTGAGAATCCTAGGCTGACA 60.293 50.000 2.96 0.00 34.93 3.58
3100 3174 5.904984 ATTCAGGGCATACATTACCAGTA 57.095 39.130 0.00 0.00 0.00 2.74
3159 3233 6.203723 CCAATACTTAGCAAAGGAGCATCTAC 59.796 42.308 0.00 0.00 37.01 2.59
3227 3301 5.234329 ACGCATAGCATTAGTAACATGTGTC 59.766 40.000 0.00 0.00 33.18 3.67
3257 3331 1.218854 GCCCACCATTGGTCATTGC 59.781 57.895 5.04 2.64 42.10 3.56
3263 3337 0.251341 GTCTTCTGCCCACCATTGGT 60.251 55.000 1.37 1.37 42.10 3.67
3280 3354 0.462047 CCACAGTAAGGATGCGGGTC 60.462 60.000 0.00 0.00 0.00 4.46
3284 3358 2.271800 GAGTTCCACAGTAAGGATGCG 58.728 52.381 0.00 0.00 34.56 4.73
3288 3362 4.160329 ACAGATGAGTTCCACAGTAAGGA 58.840 43.478 0.00 0.00 0.00 3.36
3340 3414 6.680810 TGAGAATCTGGCTAAAACACAAATG 58.319 36.000 0.00 0.00 34.92 2.32
3380 3454 6.753107 ACAACCAATAGTACCATGTTAAGC 57.247 37.500 0.00 0.00 0.00 3.09
3465 3539 6.547510 AGGGACAAAGGATTATATTGCAAGAC 59.452 38.462 4.94 0.00 0.00 3.01
3580 3654 4.592942 CAGCCATGCACCCTGTATATATT 58.407 43.478 0.00 0.00 0.00 1.28
3664 3738 0.241213 TCGTCGCTTCACCAAGAGAG 59.759 55.000 0.00 0.00 38.92 3.20
3734 3808 7.365741 CAGCATAATGAAACTGTTGAAGAACT 58.634 34.615 0.00 0.00 32.79 3.01
3735 3809 6.088616 GCAGCATAATGAAACTGTTGAAGAAC 59.911 38.462 0.00 0.00 0.00 3.01
3736 3810 6.016024 AGCAGCATAATGAAACTGTTGAAGAA 60.016 34.615 0.00 0.00 0.00 2.52
3737 3811 5.474532 AGCAGCATAATGAAACTGTTGAAGA 59.525 36.000 0.00 0.00 0.00 2.87
3738 3812 5.706916 AGCAGCATAATGAAACTGTTGAAG 58.293 37.500 0.00 0.00 0.00 3.02
3739 3813 5.710513 AGCAGCATAATGAAACTGTTGAA 57.289 34.783 0.00 0.00 0.00 2.69
3740 3814 5.710513 AAGCAGCATAATGAAACTGTTGA 57.289 34.783 0.00 0.00 0.00 3.18
3799 3873 7.038302 ACCACACTAATGAAAGTTGATCTAGGA 60.038 37.037 0.00 0.00 0.00 2.94
3824 3898 5.820947 AGTGATAAATACGGACCATTTCCAC 59.179 40.000 11.11 11.11 46.29 4.02
3833 3907 4.395959 TCCACCAGTGATAAATACGGAC 57.604 45.455 0.00 0.00 0.00 4.79
3835 3909 4.766375 AGTTCCACCAGTGATAAATACGG 58.234 43.478 0.00 0.00 0.00 4.02
3844 3918 3.054728 TCAGTTTTGAGTTCCACCAGTGA 60.055 43.478 0.00 0.00 0.00 3.41
3862 3936 4.262207 CGCCAATGATACATAGGAGTCAGT 60.262 45.833 0.00 0.00 0.00 3.41
3863 3937 4.021981 TCGCCAATGATACATAGGAGTCAG 60.022 45.833 0.00 0.00 0.00 3.51
3864 3938 3.895041 TCGCCAATGATACATAGGAGTCA 59.105 43.478 0.00 0.00 0.00 3.41
3865 3939 4.521130 TCGCCAATGATACATAGGAGTC 57.479 45.455 0.00 0.00 0.00 3.36
3866 3940 4.955811 TTCGCCAATGATACATAGGAGT 57.044 40.909 0.00 0.00 0.00 3.85
3867 3941 5.934043 TGATTTCGCCAATGATACATAGGAG 59.066 40.000 0.00 0.00 0.00 3.69
3918 3996 1.417890 AGCATACATACCTGGTGGAGC 59.582 52.381 10.23 8.81 37.04 4.70
3939 4017 7.865385 TGCTCCAAACATGTAGAAAAATACAAC 59.135 33.333 0.00 0.00 39.04 3.32
3942 4020 6.806739 GGTGCTCCAAACATGTAGAAAAATAC 59.193 38.462 0.00 0.00 0.00 1.89
3989 4078 8.107564 CCAGACGTGTTTTTGAAATGTAAAAAG 58.892 33.333 0.00 0.00 37.59 2.27
3994 4083 5.821516 ACCAGACGTGTTTTTGAAATGTA 57.178 34.783 0.00 0.00 0.00 2.29
4021 4110 9.374711 ACAAAGACCAGATATTTCCCTTTAAAA 57.625 29.630 0.00 0.00 0.00 1.52
4025 4115 6.211384 CCAACAAAGACCAGATATTTCCCTTT 59.789 38.462 0.00 0.00 0.00 3.11
4026 4116 5.716703 CCAACAAAGACCAGATATTTCCCTT 59.283 40.000 0.00 0.00 0.00 3.95
4055 4147 4.322080 TCTGAAGAACCATATAGCACCG 57.678 45.455 0.00 0.00 0.00 4.94
4088 4180 6.987403 ACTAAAATAAAACTGGGCCAAGAA 57.013 33.333 16.25 0.00 0.00 2.52
4092 4184 8.937207 TTTAGTACTAAAATAAAACTGGGCCA 57.063 30.769 22.79 5.85 32.64 5.36
4109 4201 9.155785 TCTATGGCTTAGGCTTTATTTAGTACT 57.844 33.333 7.43 0.00 38.73 2.73
4110 4202 9.205719 GTCTATGGCTTAGGCTTTATTTAGTAC 57.794 37.037 7.43 0.00 38.73 2.73
4134 4226 6.700520 CGGAGGGAGTAGTAAATAACAATGTC 59.299 42.308 0.00 0.00 0.00 3.06
4144 4236 2.097825 GTGAGCGGAGGGAGTAGTAAA 58.902 52.381 0.00 0.00 0.00 2.01
4160 4252 7.871973 CCCTCTAGAACATCTCATATTTGTGAG 59.128 40.741 0.00 0.00 45.51 3.51
4171 4263 3.431486 CCAAGCACCCTCTAGAACATCTC 60.431 52.174 0.00 0.00 0.00 2.75
4182 4274 5.193679 ACTAAAATGTATCCAAGCACCCTC 58.806 41.667 0.00 0.00 0.00 4.30
4183 4275 5.193099 ACTAAAATGTATCCAAGCACCCT 57.807 39.130 0.00 0.00 0.00 4.34
4184 4276 4.338400 GGACTAAAATGTATCCAAGCACCC 59.662 45.833 0.00 0.00 0.00 4.61
4185 4277 4.338400 GGGACTAAAATGTATCCAAGCACC 59.662 45.833 0.00 0.00 32.45 5.01
4186 4278 4.947388 TGGGACTAAAATGTATCCAAGCAC 59.053 41.667 0.00 0.00 32.45 4.40
4187 4279 5.186256 TGGGACTAAAATGTATCCAAGCA 57.814 39.130 0.00 0.00 32.45 3.91
4188 4280 5.827797 TCATGGGACTAAAATGTATCCAAGC 59.172 40.000 0.00 0.00 32.45 4.01
4189 4281 7.264373 GTCATGGGACTAAAATGTATCCAAG 57.736 40.000 0.00 0.00 40.99 3.61
4206 4298 4.225267 AGTCCCACTACTTTTAGTCATGGG 59.775 45.833 16.70 16.70 46.94 4.00
4207 4299 5.422214 AGTCCCACTACTTTTAGTCATGG 57.578 43.478 0.00 0.00 36.31 3.66
4208 4300 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
4209 4301 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
4210 4302 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
4211 4303 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
4212 4304 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
4213 4305 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
4214 4306 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
4215 4307 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
4216 4308 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
4217 4309 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
4218 4310 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
4219 4311 4.630505 GCTAGCAAGTTTTAGTCCCACTAC 59.369 45.833 10.63 0.00 28.93 2.73
4220 4312 4.323257 GGCTAGCAAGTTTTAGTCCCACTA 60.323 45.833 18.24 0.00 0.00 2.74
4221 4313 3.559384 GGCTAGCAAGTTTTAGTCCCACT 60.559 47.826 18.24 0.00 0.00 4.00
4222 4314 2.747989 GGCTAGCAAGTTTTAGTCCCAC 59.252 50.000 18.24 0.00 0.00 4.61
4223 4315 2.642807 AGGCTAGCAAGTTTTAGTCCCA 59.357 45.455 18.24 0.00 0.00 4.37
4224 4316 3.271729 GAGGCTAGCAAGTTTTAGTCCC 58.728 50.000 18.24 0.00 0.00 4.46
4225 4317 3.935828 CTGAGGCTAGCAAGTTTTAGTCC 59.064 47.826 18.24 0.00 0.00 3.85
4226 4318 4.822026 TCTGAGGCTAGCAAGTTTTAGTC 58.178 43.478 18.24 0.00 0.00 2.59
4227 4319 4.323104 CCTCTGAGGCTAGCAAGTTTTAGT 60.323 45.833 18.24 0.00 0.00 2.24
4228 4320 4.187694 CCTCTGAGGCTAGCAAGTTTTAG 58.812 47.826 18.24 4.57 0.00 1.85
4229 4321 3.055094 CCCTCTGAGGCTAGCAAGTTTTA 60.055 47.826 18.51 0.00 32.73 1.52
4230 4322 2.290577 CCCTCTGAGGCTAGCAAGTTTT 60.291 50.000 18.51 0.00 32.73 2.43
4231 4323 1.280421 CCCTCTGAGGCTAGCAAGTTT 59.720 52.381 18.51 0.00 32.73 2.66
4232 4324 0.908198 CCCTCTGAGGCTAGCAAGTT 59.092 55.000 18.51 0.00 32.73 2.66
4233 4325 0.252467 ACCCTCTGAGGCTAGCAAGT 60.252 55.000 18.51 5.97 32.73 3.16
4234 4326 0.177604 CACCCTCTGAGGCTAGCAAG 59.822 60.000 18.51 10.82 32.73 4.01
4235 4327 1.903877 GCACCCTCTGAGGCTAGCAA 61.904 60.000 18.51 0.00 32.73 3.91
4236 4328 2.362369 GCACCCTCTGAGGCTAGCA 61.362 63.158 18.51 0.00 32.73 3.49
4237 4329 1.621672 AAGCACCCTCTGAGGCTAGC 61.622 60.000 18.51 18.95 35.11 3.42
4238 4330 1.686052 CTAAGCACCCTCTGAGGCTAG 59.314 57.143 18.51 10.54 35.11 3.42
4239 4331 1.288037 TCTAAGCACCCTCTGAGGCTA 59.712 52.381 18.51 3.43 35.11 3.93
4240 4332 0.041833 TCTAAGCACCCTCTGAGGCT 59.958 55.000 18.51 9.51 38.45 4.58
4241 4333 1.069978 GATCTAAGCACCCTCTGAGGC 59.930 57.143 18.51 7.22 32.73 4.70
4242 4334 1.691434 GGATCTAAGCACCCTCTGAGG 59.309 57.143 17.02 17.02 34.30 3.86
4243 4335 2.392662 TGGATCTAAGCACCCTCTGAG 58.607 52.381 0.00 0.00 0.00 3.35
4244 4336 2.550277 TGGATCTAAGCACCCTCTGA 57.450 50.000 0.00 0.00 0.00 3.27
4245 4337 2.158842 CCTTGGATCTAAGCACCCTCTG 60.159 54.545 13.09 0.00 0.00 3.35
4246 4338 2.122768 CCTTGGATCTAAGCACCCTCT 58.877 52.381 13.09 0.00 0.00 3.69
4247 4339 1.141858 CCCTTGGATCTAAGCACCCTC 59.858 57.143 13.09 0.00 0.00 4.30
4248 4340 1.216990 CCCTTGGATCTAAGCACCCT 58.783 55.000 13.09 0.00 0.00 4.34
4249 4341 1.134068 GTCCCTTGGATCTAAGCACCC 60.134 57.143 13.09 0.00 32.73 4.61
4250 4342 1.840635 AGTCCCTTGGATCTAAGCACC 59.159 52.381 13.09 3.09 32.73 5.01
4251 4343 3.636153 AAGTCCCTTGGATCTAAGCAC 57.364 47.619 13.09 11.16 32.73 4.40
4252 4344 5.975988 AATAAGTCCCTTGGATCTAAGCA 57.024 39.130 13.09 0.00 32.73 3.91
4253 4345 7.993758 ACTAAAATAAGTCCCTTGGATCTAAGC 59.006 37.037 13.09 0.47 32.73 3.09
4254 4346 9.549078 GACTAAAATAAGTCCCTTGGATCTAAG 57.451 37.037 11.68 11.68 40.06 2.18
4255 4347 9.280456 AGACTAAAATAAGTCCCTTGGATCTAA 57.720 33.333 0.54 0.00 45.86 2.10
4256 4348 8.705594 CAGACTAAAATAAGTCCCTTGGATCTA 58.294 37.037 0.54 0.00 45.86 1.98
4257 4349 7.403231 TCAGACTAAAATAAGTCCCTTGGATCT 59.597 37.037 0.54 0.00 45.86 2.75
4258 4350 7.496263 GTCAGACTAAAATAAGTCCCTTGGATC 59.504 40.741 0.00 0.00 45.86 3.36
4259 4351 7.182930 AGTCAGACTAAAATAAGTCCCTTGGAT 59.817 37.037 0.00 0.00 45.86 3.41
4260 4352 6.500751 AGTCAGACTAAAATAAGTCCCTTGGA 59.499 38.462 0.00 0.00 45.86 3.53
4261 4353 6.712276 AGTCAGACTAAAATAAGTCCCTTGG 58.288 40.000 0.00 0.00 45.86 3.61
4262 4354 9.720769 TTTAGTCAGACTAAAATAAGTCCCTTG 57.279 33.333 26.93 0.00 44.84 3.61
4281 4373 9.654663 GCCTCTTAAAGAGACTATTTTTAGTCA 57.345 33.333 13.86 0.00 45.07 3.41
4282 4374 9.878667 AGCCTCTTAAAGAGACTATTTTTAGTC 57.121 33.333 0.00 5.24 45.07 2.59
4289 4381 9.878667 GAACTTTAGCCTCTTAAAGAGACTATT 57.121 33.333 11.30 0.00 45.07 1.73
4290 4382 8.479689 GGAACTTTAGCCTCTTAAAGAGACTAT 58.520 37.037 11.30 0.00 45.07 2.12
4291 4383 7.453752 TGGAACTTTAGCCTCTTAAAGAGACTA 59.546 37.037 11.30 0.40 45.07 2.59
4292 4384 6.270231 TGGAACTTTAGCCTCTTAAAGAGACT 59.730 38.462 11.30 1.37 45.07 3.24
4293 4385 6.465084 TGGAACTTTAGCCTCTTAAAGAGAC 58.535 40.000 11.30 0.00 45.07 3.36
4294 4386 6.681729 TGGAACTTTAGCCTCTTAAAGAGA 57.318 37.500 11.30 0.00 45.07 3.10
4295 4387 6.128145 GCTTGGAACTTTAGCCTCTTAAAGAG 60.128 42.308 11.30 0.56 41.17 2.85
4296 4388 5.705905 GCTTGGAACTTTAGCCTCTTAAAGA 59.294 40.000 11.30 0.00 41.17 2.52
4297 4389 5.473504 TGCTTGGAACTTTAGCCTCTTAAAG 59.526 40.000 4.46 4.46 43.21 1.85
4298 4390 5.240844 GTGCTTGGAACTTTAGCCTCTTAAA 59.759 40.000 0.00 0.00 34.03 1.52
4299 4391 4.760204 GTGCTTGGAACTTTAGCCTCTTAA 59.240 41.667 0.00 0.00 34.03 1.85
4300 4392 4.324267 GTGCTTGGAACTTTAGCCTCTTA 58.676 43.478 0.00 0.00 34.03 2.10
4301 4393 3.149981 GTGCTTGGAACTTTAGCCTCTT 58.850 45.455 0.00 0.00 34.03 2.85
4302 4394 2.553247 GGTGCTTGGAACTTTAGCCTCT 60.553 50.000 0.00 0.00 34.03 3.69
4303 4395 1.813178 GGTGCTTGGAACTTTAGCCTC 59.187 52.381 0.00 0.00 34.03 4.70
4304 4396 1.547901 GGGTGCTTGGAACTTTAGCCT 60.548 52.381 0.00 0.00 34.03 4.58
4305 4397 0.888619 GGGTGCTTGGAACTTTAGCC 59.111 55.000 0.00 0.00 34.03 3.93
4306 4398 1.911057 AGGGTGCTTGGAACTTTAGC 58.089 50.000 0.00 0.00 35.50 3.09
4307 4399 3.253432 GTCAAGGGTGCTTGGAACTTTAG 59.747 47.826 0.00 0.00 35.23 1.85
4308 4400 3.117663 AGTCAAGGGTGCTTGGAACTTTA 60.118 43.478 0.00 0.00 35.23 1.85
4309 4401 2.031870 GTCAAGGGTGCTTGGAACTTT 58.968 47.619 0.00 0.00 35.23 2.66
4310 4402 1.215423 AGTCAAGGGTGCTTGGAACTT 59.785 47.619 0.00 0.00 35.23 2.66
4311 4403 0.846693 AGTCAAGGGTGCTTGGAACT 59.153 50.000 0.00 0.00 35.23 3.01
4312 4404 2.561478 TAGTCAAGGGTGCTTGGAAC 57.439 50.000 0.00 0.00 35.23 3.62
4313 4405 3.137544 TCTTTAGTCAAGGGTGCTTGGAA 59.862 43.478 0.00 0.00 35.23 3.53
4314 4406 2.708861 TCTTTAGTCAAGGGTGCTTGGA 59.291 45.455 0.00 0.00 35.23 3.53
4315 4407 3.077359 CTCTTTAGTCAAGGGTGCTTGG 58.923 50.000 0.00 0.00 35.23 3.61
4316 4408 3.077359 CCTCTTTAGTCAAGGGTGCTTG 58.923 50.000 0.00 0.00 29.56 4.01
4317 4409 2.040412 CCCTCTTTAGTCAAGGGTGCTT 59.960 50.000 0.00 0.00 44.11 3.91
4318 4410 1.630878 CCCTCTTTAGTCAAGGGTGCT 59.369 52.381 0.00 0.00 44.11 4.40
4319 4411 2.115343 CCCTCTTTAGTCAAGGGTGC 57.885 55.000 0.00 0.00 44.11 5.01
4323 4415 4.569719 TTTAGCCCCTCTTTAGTCAAGG 57.430 45.455 0.00 0.00 32.64 3.61
4324 4416 5.561679 AGTTTTAGCCCCTCTTTAGTCAAG 58.438 41.667 0.00 0.00 0.00 3.02
4325 4417 5.578157 AGTTTTAGCCCCTCTTTAGTCAA 57.422 39.130 0.00 0.00 0.00 3.18
4326 4418 5.783875 ACTAGTTTTAGCCCCTCTTTAGTCA 59.216 40.000 0.00 0.00 0.00 3.41
4327 4419 6.154877 AGACTAGTTTTAGCCCCTCTTTAGTC 59.845 42.308 0.00 0.00 36.42 2.59
4328 4420 6.024247 AGACTAGTTTTAGCCCCTCTTTAGT 58.976 40.000 0.00 0.00 0.00 2.24
4329 4421 6.547930 AGACTAGTTTTAGCCCCTCTTTAG 57.452 41.667 0.00 0.00 0.00 1.85
4330 4422 6.499350 TCAAGACTAGTTTTAGCCCCTCTTTA 59.501 38.462 0.00 0.00 0.00 1.85
4331 4423 5.309806 TCAAGACTAGTTTTAGCCCCTCTTT 59.690 40.000 0.00 0.00 0.00 2.52
4332 4424 4.844655 TCAAGACTAGTTTTAGCCCCTCTT 59.155 41.667 0.00 0.00 0.00 2.85
4333 4425 4.426704 TCAAGACTAGTTTTAGCCCCTCT 58.573 43.478 0.00 0.00 0.00 3.69
4334 4426 4.466726 TCTCAAGACTAGTTTTAGCCCCTC 59.533 45.833 0.00 0.00 0.00 4.30
4335 4427 4.223255 GTCTCAAGACTAGTTTTAGCCCCT 59.777 45.833 0.00 0.00 41.65 4.79
4336 4428 4.505808 GTCTCAAGACTAGTTTTAGCCCC 58.494 47.826 0.00 0.00 41.65 5.80
4377 4469 2.730382 CCACATTTTGGTAGGGGTACC 58.270 52.381 2.17 2.17 45.27 3.34
4378 4470 3.724732 TCCACATTTTGGTAGGGGTAC 57.275 47.619 0.00 0.00 46.97 3.34
4379 4471 4.957606 AATCCACATTTTGGTAGGGGTA 57.042 40.909 0.00 0.00 46.97 3.69
4380 4472 3.845109 AATCCACATTTTGGTAGGGGT 57.155 42.857 0.00 0.00 46.97 4.95
4381 4473 4.867086 ACTAATCCACATTTTGGTAGGGG 58.133 43.478 0.00 0.00 46.97 4.79
4382 4474 4.887655 GGACTAATCCACATTTTGGTAGGG 59.112 45.833 0.00 0.00 46.97 3.53
4396 4488 4.447138 TGAGGAGAGAGAGGACTAATCC 57.553 50.000 0.00 0.00 46.69 3.01
4397 4489 6.976934 AAATGAGGAGAGAGAGGACTAATC 57.023 41.667 0.00 0.00 0.00 1.75
4398 4490 8.065007 AGTTAAATGAGGAGAGAGAGGACTAAT 58.935 37.037 0.00 0.00 0.00 1.73
4399 4491 7.415086 AGTTAAATGAGGAGAGAGAGGACTAA 58.585 38.462 0.00 0.00 0.00 2.24
4400 4492 6.975949 AGTTAAATGAGGAGAGAGAGGACTA 58.024 40.000 0.00 0.00 0.00 2.59
4401 4493 5.837829 AGTTAAATGAGGAGAGAGAGGACT 58.162 41.667 0.00 0.00 0.00 3.85
4402 4494 5.068591 GGAGTTAAATGAGGAGAGAGAGGAC 59.931 48.000 0.00 0.00 0.00 3.85
4403 4495 5.043732 AGGAGTTAAATGAGGAGAGAGAGGA 60.044 44.000 0.00 0.00 0.00 3.71
4404 4496 5.208121 AGGAGTTAAATGAGGAGAGAGAGG 58.792 45.833 0.00 0.00 0.00 3.69
4405 4497 6.129179 AGAGGAGTTAAATGAGGAGAGAGAG 58.871 44.000 0.00 0.00 0.00 3.20
4406 4498 6.086011 AGAGGAGTTAAATGAGGAGAGAGA 57.914 41.667 0.00 0.00 0.00 3.10
4407 4499 5.301805 GGAGAGGAGTTAAATGAGGAGAGAG 59.698 48.000 0.00 0.00 0.00 3.20
4408 4500 5.043732 AGGAGAGGAGTTAAATGAGGAGAGA 60.044 44.000 0.00 0.00 0.00 3.10
4409 4501 5.208121 AGGAGAGGAGTTAAATGAGGAGAG 58.792 45.833 0.00 0.00 0.00 3.20
4410 4502 5.213868 AGGAGAGGAGTTAAATGAGGAGA 57.786 43.478 0.00 0.00 0.00 3.71
4411 4503 5.948742 AAGGAGAGGAGTTAAATGAGGAG 57.051 43.478 0.00 0.00 0.00 3.69
4412 4504 7.236847 TGTTAAAGGAGAGGAGTTAAATGAGGA 59.763 37.037 0.00 0.00 0.00 3.71
4413 4505 7.334671 GTGTTAAAGGAGAGGAGTTAAATGAGG 59.665 40.741 0.00 0.00 0.00 3.86
4414 4506 7.878127 TGTGTTAAAGGAGAGGAGTTAAATGAG 59.122 37.037 0.00 0.00 0.00 2.90
4415 4507 7.741785 TGTGTTAAAGGAGAGGAGTTAAATGA 58.258 34.615 0.00 0.00 0.00 2.57
4416 4508 7.979444 TGTGTTAAAGGAGAGGAGTTAAATG 57.021 36.000 0.00 0.00 0.00 2.32
4417 4509 7.121315 GCATGTGTTAAAGGAGAGGAGTTAAAT 59.879 37.037 0.00 0.00 0.00 1.40
4418 4510 6.430000 GCATGTGTTAAAGGAGAGGAGTTAAA 59.570 38.462 0.00 0.00 0.00 1.52
4419 4511 5.938125 GCATGTGTTAAAGGAGAGGAGTTAA 59.062 40.000 0.00 0.00 0.00 2.01
4420 4512 5.488341 GCATGTGTTAAAGGAGAGGAGTTA 58.512 41.667 0.00 0.00 0.00 2.24
4421 4513 4.327680 GCATGTGTTAAAGGAGAGGAGTT 58.672 43.478 0.00 0.00 0.00 3.01
4422 4514 3.617531 CGCATGTGTTAAAGGAGAGGAGT 60.618 47.826 0.00 0.00 0.00 3.85
4423 4515 2.932614 CGCATGTGTTAAAGGAGAGGAG 59.067 50.000 0.00 0.00 0.00 3.69
4424 4516 2.565391 TCGCATGTGTTAAAGGAGAGGA 59.435 45.455 6.09 0.00 0.00 3.71
4425 4517 2.932614 CTCGCATGTGTTAAAGGAGAGG 59.067 50.000 6.09 0.00 0.00 3.69
4426 4518 3.589988 ACTCGCATGTGTTAAAGGAGAG 58.410 45.455 6.09 0.00 0.00 3.20
4427 4519 3.678056 ACTCGCATGTGTTAAAGGAGA 57.322 42.857 6.09 0.00 0.00 3.71
4428 4520 4.749245 AAACTCGCATGTGTTAAAGGAG 57.251 40.909 6.09 0.00 31.90 3.69
4429 4521 4.261405 CCAAAACTCGCATGTGTTAAAGGA 60.261 41.667 6.09 0.00 31.90 3.36
4430 4522 3.980775 CCAAAACTCGCATGTGTTAAAGG 59.019 43.478 6.09 0.00 31.90 3.11
4431 4523 4.854399 TCCAAAACTCGCATGTGTTAAAG 58.146 39.130 6.09 0.00 31.90 1.85
4432 4524 4.902443 TCCAAAACTCGCATGTGTTAAA 57.098 36.364 6.09 0.00 31.90 1.52
4433 4525 5.218885 CAATCCAAAACTCGCATGTGTTAA 58.781 37.500 6.09 0.00 31.90 2.01
4434 4526 4.320861 CCAATCCAAAACTCGCATGTGTTA 60.321 41.667 6.09 0.00 31.90 2.41
4435 4527 3.552684 CCAATCCAAAACTCGCATGTGTT 60.553 43.478 6.09 0.82 33.46 3.32
4436 4528 2.030007 CCAATCCAAAACTCGCATGTGT 60.030 45.455 6.09 0.00 0.00 3.72
4437 4529 2.228582 TCCAATCCAAAACTCGCATGTG 59.771 45.455 0.00 0.00 0.00 3.21
4438 4530 2.489329 CTCCAATCCAAAACTCGCATGT 59.511 45.455 0.00 0.00 0.00 3.21
4439 4531 2.159338 CCTCCAATCCAAAACTCGCATG 60.159 50.000 0.00 0.00 0.00 4.06
4440 4532 2.094675 CCTCCAATCCAAAACTCGCAT 58.905 47.619 0.00 0.00 0.00 4.73
4441 4533 1.533625 CCTCCAATCCAAAACTCGCA 58.466 50.000 0.00 0.00 0.00 5.10
4442 4534 0.811281 CCCTCCAATCCAAAACTCGC 59.189 55.000 0.00 0.00 0.00 5.03
4443 4535 2.200373 ACCCTCCAATCCAAAACTCG 57.800 50.000 0.00 0.00 0.00 4.18
4444 4536 3.006859 CCAAACCCTCCAATCCAAAACTC 59.993 47.826 0.00 0.00 0.00 3.01
4445 4537 2.972021 CCAAACCCTCCAATCCAAAACT 59.028 45.455 0.00 0.00 0.00 2.66
4446 4538 2.969262 TCCAAACCCTCCAATCCAAAAC 59.031 45.455 0.00 0.00 0.00 2.43
4447 4539 3.238597 CTCCAAACCCTCCAATCCAAAA 58.761 45.455 0.00 0.00 0.00 2.44
4448 4540 2.492567 CCTCCAAACCCTCCAATCCAAA 60.493 50.000 0.00 0.00 0.00 3.28
4449 4541 1.077005 CCTCCAAACCCTCCAATCCAA 59.923 52.381 0.00 0.00 0.00 3.53
4450 4542 0.704076 CCTCCAAACCCTCCAATCCA 59.296 55.000 0.00 0.00 0.00 3.41
4451 4543 0.999712 TCCTCCAAACCCTCCAATCC 59.000 55.000 0.00 0.00 0.00 3.01
4452 4544 4.519906 TTATCCTCCAAACCCTCCAATC 57.480 45.455 0.00 0.00 0.00 2.67
4453 4545 6.606241 TTATTATCCTCCAAACCCTCCAAT 57.394 37.500 0.00 0.00 0.00 3.16
4454 4546 6.410222 TTTATTATCCTCCAAACCCTCCAA 57.590 37.500 0.00 0.00 0.00 3.53
4455 4547 6.372931 CATTTATTATCCTCCAAACCCTCCA 58.627 40.000 0.00 0.00 0.00 3.86
4456 4548 5.243954 GCATTTATTATCCTCCAAACCCTCC 59.756 44.000 0.00 0.00 0.00 4.30
4457 4549 6.071320 AGCATTTATTATCCTCCAAACCCTC 58.929 40.000 0.00 0.00 0.00 4.30
4458 4550 6.030727 AGCATTTATTATCCTCCAAACCCT 57.969 37.500 0.00 0.00 0.00 4.34
4459 4551 5.833131 TGAGCATTTATTATCCTCCAAACCC 59.167 40.000 0.00 0.00 0.00 4.11
4460 4552 6.959639 TGAGCATTTATTATCCTCCAAACC 57.040 37.500 0.00 0.00 0.00 3.27
4463 4555 9.866655 AGTTAATGAGCATTTATTATCCTCCAA 57.133 29.630 0.52 0.00 32.50 3.53
4464 4556 9.866655 AAGTTAATGAGCATTTATTATCCTCCA 57.133 29.630 0.52 0.00 32.50 3.86
4477 4569 9.678260 AGAGACTAAAATCAAGTTAATGAGCAT 57.322 29.630 0.00 0.00 31.76 3.79
4494 4586 8.204836 GCTTGGATCCAAATACTAGAGACTAAA 58.795 37.037 26.87 0.00 35.33 1.85
4495 4587 7.344612 TGCTTGGATCCAAATACTAGAGACTAA 59.655 37.037 26.87 0.01 35.33 2.24
4496 4588 6.839134 TGCTTGGATCCAAATACTAGAGACTA 59.161 38.462 26.87 0.69 35.33 2.59
4497 4589 5.663106 TGCTTGGATCCAAATACTAGAGACT 59.337 40.000 26.87 0.00 35.33 3.24
4498 4590 5.918608 TGCTTGGATCCAAATACTAGAGAC 58.081 41.667 26.87 10.04 35.33 3.36
4499 4591 6.464892 CCATGCTTGGATCCAAATACTAGAGA 60.465 42.308 26.87 6.13 46.92 3.10
4500 4592 5.704515 CCATGCTTGGATCCAAATACTAGAG 59.295 44.000 26.87 14.21 46.92 2.43
4501 4593 5.456619 CCCATGCTTGGATCCAAATACTAGA 60.457 44.000 26.87 3.43 46.92 2.43
4502 4594 4.763793 CCCATGCTTGGATCCAAATACTAG 59.236 45.833 26.87 15.64 46.92 2.57
4503 4595 4.167892 ACCCATGCTTGGATCCAAATACTA 59.832 41.667 26.87 12.31 46.92 1.82
4504 4596 3.052642 ACCCATGCTTGGATCCAAATACT 60.053 43.478 26.87 10.16 46.92 2.12
4505 4597 3.068590 CACCCATGCTTGGATCCAAATAC 59.931 47.826 26.87 19.00 46.92 1.89
4506 4598 3.053019 TCACCCATGCTTGGATCCAAATA 60.053 43.478 26.87 18.63 46.92 1.40
4507 4599 2.112998 CACCCATGCTTGGATCCAAAT 58.887 47.619 26.87 16.27 46.92 2.32
4508 4600 1.076841 TCACCCATGCTTGGATCCAAA 59.923 47.619 26.87 14.63 46.92 3.28
4509 4601 0.703488 TCACCCATGCTTGGATCCAA 59.297 50.000 25.53 25.53 46.92 3.53
4510 4602 0.256752 CTCACCCATGCTTGGATCCA 59.743 55.000 19.85 11.44 46.92 3.41
4511 4603 0.466922 CCTCACCCATGCTTGGATCC 60.467 60.000 19.85 4.20 46.92 3.36
4512 4604 1.105759 GCCTCACCCATGCTTGGATC 61.106 60.000 19.85 0.00 46.92 3.36
4513 4605 1.076485 GCCTCACCCATGCTTGGAT 60.076 57.895 19.85 0.00 46.92 3.41
4514 4606 0.913934 TAGCCTCACCCATGCTTGGA 60.914 55.000 19.85 0.00 46.92 3.53
4515 4607 0.465097 CTAGCCTCACCCATGCTTGG 60.465 60.000 11.68 11.68 43.23 3.61
4516 4608 1.099879 GCTAGCCTCACCCATGCTTG 61.100 60.000 2.29 0.00 36.57 4.01
4517 4609 1.225704 GCTAGCCTCACCCATGCTT 59.774 57.895 2.29 0.00 36.57 3.91
4518 4610 1.565390 TTGCTAGCCTCACCCATGCT 61.565 55.000 13.29 0.00 39.10 3.79
4519 4611 1.077501 TTGCTAGCCTCACCCATGC 60.078 57.895 13.29 0.00 0.00 4.06
4520 4612 0.254178 ACTTGCTAGCCTCACCCATG 59.746 55.000 13.29 0.00 0.00 3.66
4521 4613 0.995024 AACTTGCTAGCCTCACCCAT 59.005 50.000 13.29 0.00 0.00 4.00
4522 4614 0.771127 AAACTTGCTAGCCTCACCCA 59.229 50.000 13.29 0.00 0.00 4.51
4523 4615 1.911057 AAAACTTGCTAGCCTCACCC 58.089 50.000 13.29 0.00 0.00 4.61
4524 4616 3.676093 ACTAAAACTTGCTAGCCTCACC 58.324 45.455 13.29 0.00 0.00 4.02
4525 4617 3.685272 GGACTAAAACTTGCTAGCCTCAC 59.315 47.826 13.29 0.00 0.00 3.51
4526 4618 3.307480 GGGACTAAAACTTGCTAGCCTCA 60.307 47.826 13.29 0.00 0.00 3.86
4527 4619 3.271729 GGGACTAAAACTTGCTAGCCTC 58.728 50.000 13.29 0.00 0.00 4.70
4528 4620 2.642807 TGGGACTAAAACTTGCTAGCCT 59.357 45.455 13.29 0.00 0.00 4.58
4529 4621 2.747989 GTGGGACTAAAACTTGCTAGCC 59.252 50.000 13.29 0.00 0.00 3.93
4530 4622 3.676093 AGTGGGACTAAAACTTGCTAGC 58.324 45.455 8.10 8.10 0.00 3.42
4531 4623 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
4532 4624 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
4533 4625 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
4534 4626 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
4535 4627 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
4536 4628 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
4537 4629 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
4538 4630 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
4539 4631 7.881232 CCATGACTAAAAGTAGTGGGACTAAAA 59.119 37.037 0.00 0.00 40.82 1.52
4540 4632 7.391620 CCATGACTAAAAGTAGTGGGACTAAA 58.608 38.462 0.00 0.00 40.82 1.85
4541 4633 6.942976 CCATGACTAAAAGTAGTGGGACTAA 58.057 40.000 0.00 0.00 40.82 2.24
4542 4634 6.540438 CCATGACTAAAAGTAGTGGGACTA 57.460 41.667 0.00 0.00 40.82 2.59
4543 4635 5.422214 CCATGACTAAAAGTAGTGGGACT 57.578 43.478 0.00 0.00 40.82 3.85
4546 4638 4.514401 GTCCCATGACTAAAAGTAGTGGG 58.486 47.826 17.22 17.22 46.41 4.61
4557 4649 5.657745 TGGATACGTTTTAGTCCCATGACTA 59.342 40.000 0.00 0.00 45.97 2.59
4559 4651 4.761975 TGGATACGTTTTAGTCCCATGAC 58.238 43.478 0.00 0.00 40.25 3.06
4560 4652 5.423704 TTGGATACGTTTTAGTCCCATGA 57.576 39.130 0.00 0.00 42.51 3.07
4561 4653 4.035208 GCTTGGATACGTTTTAGTCCCATG 59.965 45.833 0.00 0.00 42.51 3.66
4562 4654 4.196971 GCTTGGATACGTTTTAGTCCCAT 58.803 43.478 0.00 0.00 42.51 4.00
4563 4655 3.008157 TGCTTGGATACGTTTTAGTCCCA 59.992 43.478 0.00 0.00 42.51 4.37
4564 4656 3.373130 GTGCTTGGATACGTTTTAGTCCC 59.627 47.826 0.00 0.00 42.51 4.46
4565 4657 3.373130 GGTGCTTGGATACGTTTTAGTCC 59.627 47.826 0.00 0.00 42.51 3.85
4566 4658 3.373130 GGGTGCTTGGATACGTTTTAGTC 59.627 47.826 0.00 0.00 42.51 2.59
4567 4659 3.008704 AGGGTGCTTGGATACGTTTTAGT 59.991 43.478 0.00 0.00 42.51 2.24
4568 4660 3.606687 AGGGTGCTTGGATACGTTTTAG 58.393 45.455 0.00 0.00 42.51 1.85
4569 4661 3.262405 AGAGGGTGCTTGGATACGTTTTA 59.738 43.478 0.00 0.00 42.51 1.52
4570 4662 2.039879 AGAGGGTGCTTGGATACGTTTT 59.960 45.455 0.00 0.00 42.51 2.43
4571 4663 1.628846 AGAGGGTGCTTGGATACGTTT 59.371 47.619 0.00 0.00 42.51 3.60
4572 4664 1.207329 GAGAGGGTGCTTGGATACGTT 59.793 52.381 0.00 0.00 42.51 3.99
4573 4665 0.824759 GAGAGGGTGCTTGGATACGT 59.175 55.000 0.00 0.00 42.51 3.57
4574 4666 0.824109 TGAGAGGGTGCTTGGATACG 59.176 55.000 0.00 0.00 42.51 3.06
4575 4667 1.134371 GGTGAGAGGGTGCTTGGATAC 60.134 57.143 0.00 0.00 0.00 2.24
4576 4668 1.204146 GGTGAGAGGGTGCTTGGATA 58.796 55.000 0.00 0.00 0.00 2.59
4577 4669 1.566298 GGGTGAGAGGGTGCTTGGAT 61.566 60.000 0.00 0.00 0.00 3.41
4578 4670 2.224159 GGGTGAGAGGGTGCTTGGA 61.224 63.158 0.00 0.00 0.00 3.53
4579 4671 1.856539 ATGGGTGAGAGGGTGCTTGG 61.857 60.000 0.00 0.00 0.00 3.61
4580 4672 0.679002 CATGGGTGAGAGGGTGCTTG 60.679 60.000 0.00 0.00 0.00 4.01
4581 4673 1.687612 CATGGGTGAGAGGGTGCTT 59.312 57.895 0.00 0.00 0.00 3.91
4582 4674 2.976490 GCATGGGTGAGAGGGTGCT 61.976 63.158 0.00 0.00 0.00 4.40
4583 4675 2.439156 GCATGGGTGAGAGGGTGC 60.439 66.667 0.00 0.00 0.00 5.01
4584 4676 0.679002 CAAGCATGGGTGAGAGGGTG 60.679 60.000 0.00 0.00 0.00 4.61
4585 4677 1.687612 CAAGCATGGGTGAGAGGGT 59.312 57.895 0.00 0.00 0.00 4.34
4586 4678 1.077212 CCAAGCATGGGTGAGAGGG 60.077 63.158 0.00 0.00 43.51 4.30
4587 4679 4.651867 CCAAGCATGGGTGAGAGG 57.348 61.111 0.00 0.00 43.51 3.69
4596 4688 7.500227 TCTCTTTAGTATTTGGATCCAAGCATG 59.500 37.037 25.69 12.43 37.24 4.06
4597 4689 7.500559 GTCTCTTTAGTATTTGGATCCAAGCAT 59.499 37.037 25.69 19.69 37.24 3.79
4598 4690 6.823689 GTCTCTTTAGTATTTGGATCCAAGCA 59.176 38.462 25.69 14.00 37.24 3.91
4599 4691 7.051000 AGTCTCTTTAGTATTTGGATCCAAGC 58.949 38.462 25.69 19.18 37.24 4.01
4617 4709 9.507329 TGCTCATTAACTTGATTTTAGTCTCTT 57.493 29.630 0.00 0.00 0.00 2.85
4618 4710 9.678260 ATGCTCATTAACTTGATTTTAGTCTCT 57.322 29.630 0.00 0.00 0.00 3.10
4631 4723 9.866655 TGGAGGATAATAAATGCTCATTAACTT 57.133 29.630 8.48 0.00 38.10 2.66
4632 4724 9.866655 TTGGAGGATAATAAATGCTCATTAACT 57.133 29.630 8.48 0.00 38.10 2.24
4635 4727 9.077885 GGTTTGGAGGATAATAAATGCTCATTA 57.922 33.333 8.48 0.00 38.10 1.90
4636 4728 7.955918 GGTTTGGAGGATAATAAATGCTCATT 58.044 34.615 8.48 0.00 38.10 2.57
4637 4729 7.530426 GGTTTGGAGGATAATAAATGCTCAT 57.470 36.000 8.48 0.00 38.10 2.90
4638 4730 6.959639 GGTTTGGAGGATAATAAATGCTCA 57.040 37.500 8.48 0.00 38.10 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.