Multiple sequence alignment - TraesCS6B01G304600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G304600 chr6B 100.000 4924 0 0 1 4924 545270065 545274988 0.000000e+00 9094.0
1 TraesCS6B01G304600 chr6A 91.746 3901 192 42 720 4529 503821195 503825056 0.000000e+00 5301.0
2 TraesCS6B01G304600 chr6A 96.364 660 24 0 1 660 503820198 503820857 0.000000e+00 1086.0
3 TraesCS6B01G304600 chr6A 89.474 57 5 1 1088 1144 163208043 163207988 2.460000e-08 71.3
4 TraesCS6B01G304600 chr6D 94.028 3332 120 21 1 3282 363258673 363261975 0.000000e+00 4977.0
5 TraesCS6B01G304600 chr6D 88.879 1088 59 20 3416 4469 363262110 363263169 0.000000e+00 1282.0
6 TraesCS6B01G304600 chr6D 90.948 232 17 1 4462 4693 363278477 363278704 4.790000e-80 309.0
7 TraesCS6B01G304600 chr1B 95.699 93 4 0 4696 4788 578353157 578353065 3.070000e-32 150.0
8 TraesCS6B01G304600 chr1B 79.167 192 25 8 996 1184 39905419 39905240 8.660000e-23 119.0
9 TraesCS6B01G304600 chr4A 97.647 85 2 0 4693 4777 691818262 691818346 3.970000e-31 147.0
10 TraesCS6B01G304600 chr4B 94.565 92 5 0 4697 4788 385244461 385244370 5.140000e-30 143.0
11 TraesCS6B01G304600 chr4B 95.062 81 3 1 4695 4774 403623808 403623888 5.170000e-25 126.0
12 TraesCS6B01G304600 chr4B 90.526 95 8 1 4693 4786 46952668 46952574 1.860000e-24 124.0
13 TraesCS6B01G304600 chr4B 80.368 163 17 8 996 1155 51669002 51669152 5.210000e-20 110.0
14 TraesCS6B01G304600 chr5B 97.436 78 2 0 4696 4773 369259253 369259330 3.090000e-27 134.0
15 TraesCS6B01G304600 chr2B 96.250 80 3 0 4695 4774 758599343 758599422 1.110000e-26 132.0
16 TraesCS6B01G304600 chr2B 91.579 95 7 1 4695 4788 797928188 797928094 4.000000e-26 130.0
17 TraesCS6B01G304600 chr3B 93.976 83 5 0 4695 4777 790580658 790580576 5.170000e-25 126.0
18 TraesCS6B01G304600 chr1D 79.688 192 24 8 996 1184 354724013 354724192 1.860000e-24 124.0
19 TraesCS6B01G304600 chr2A 79.651 172 20 9 996 1164 710789608 710789449 5.210000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G304600 chr6B 545270065 545274988 4923 False 9094.0 9094 100.0000 1 4924 1 chr6B.!!$F1 4923
1 TraesCS6B01G304600 chr6A 503820198 503825056 4858 False 3193.5 5301 94.0550 1 4529 2 chr6A.!!$F1 4528
2 TraesCS6B01G304600 chr6D 363258673 363263169 4496 False 3129.5 4977 91.4535 1 4469 2 chr6D.!!$F2 4468

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
21 22 0.681887 CAGGCACATTGGCAGGATCA 60.682 55.000 2.29 0.0 46.46 2.92 F
390 391 1.043116 ACATGGGATCGAAGAGGCGA 61.043 55.000 0.00 0.0 43.63 5.54 F
1849 2187 1.818060 TGACATCGGAAAATGCCTTGG 59.182 47.619 0.00 0.0 0.00 3.61 F
2613 2952 1.065401 CAAAACTTGCGTGCTTCCTCA 59.935 47.619 0.00 0.0 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1676 2013 1.739562 CTCTGCTGTCGGGTCTTGC 60.740 63.158 0.00 0.0 0.00 4.01 R
2039 2378 2.043801 AGGTAAGACTCCAAGCTCCTCT 59.956 50.000 0.00 0.0 0.00 3.69 R
3623 4041 1.134310 CAGATGACATGCAGGCCACTA 60.134 52.381 5.01 0.0 0.00 2.74 R
4571 5028 0.109458 CGACCAACGTTCATCTCCGA 60.109 55.000 0.00 0.0 37.22 4.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.681887 CAGGCACATTGGCAGGATCA 60.682 55.000 2.29 0.00 46.46 2.92
26 27 2.028748 GCACATTGGCAGGATCAAAGTT 60.029 45.455 0.00 0.00 0.00 2.66
30 31 2.205022 TGGCAGGATCAAAGTTGAGG 57.795 50.000 0.00 0.00 41.08 3.86
90 91 1.677966 ATTGCCAGCAGCCTCACAG 60.678 57.895 0.00 0.00 42.71 3.66
339 340 3.386237 GTGGCGAGGGAGAGCAGT 61.386 66.667 0.00 0.00 34.54 4.40
366 367 4.201679 CGCATGGAGCCGACGGTA 62.202 66.667 16.73 0.07 41.38 4.02
390 391 1.043116 ACATGGGATCGAAGAGGCGA 61.043 55.000 0.00 0.00 43.63 5.54
769 1048 2.348888 ATCTCGCCTCGACGGGTTT 61.349 57.895 0.00 0.00 34.33 3.27
1214 1531 2.682856 TCCAGTGCTTGTCTTTGTTGTC 59.317 45.455 0.00 0.00 0.00 3.18
1215 1532 2.684881 CCAGTGCTTGTCTTTGTTGTCT 59.315 45.455 0.00 0.00 0.00 3.41
1232 1549 6.494842 TGTTGTCTTGTTGATAGAAAACTGC 58.505 36.000 0.00 0.00 39.53 4.40
1235 1552 5.239306 TGTCTTGTTGATAGAAAACTGCAGG 59.761 40.000 19.93 0.00 0.00 4.85
1250 1567 4.651778 ACTGCAGGACTATTTGTTGCTAA 58.348 39.130 19.93 0.00 34.47 3.09
1251 1568 5.070001 ACTGCAGGACTATTTGTTGCTAAA 58.930 37.500 19.93 0.00 34.47 1.85
1252 1569 5.711976 ACTGCAGGACTATTTGTTGCTAAAT 59.288 36.000 19.93 0.00 34.47 1.40
1253 1570 6.884295 ACTGCAGGACTATTTGTTGCTAAATA 59.116 34.615 19.93 0.00 34.47 1.40
1263 1580 9.423061 CTATTTGTTGCTAAATAAAAGCCAAGT 57.577 29.630 0.00 0.00 39.30 3.16
1264 1581 8.675705 ATTTGTTGCTAAATAAAAGCCAAGTT 57.324 26.923 0.00 0.00 39.30 2.66
1386 1703 6.747414 AGCATGTGATAGGGTAAATCTACA 57.253 37.500 0.00 0.00 0.00 2.74
1400 1717 5.880054 AAATCTACAAGATGGGTCGTTTG 57.120 39.130 0.00 0.00 34.65 2.93
1433 1761 8.042515 GGTGTAACAATTGGGTTATACTACTGA 58.957 37.037 10.83 0.00 41.94 3.41
1444 1772 8.768397 TGGGTTATACTACTGAACATCATCTTT 58.232 33.333 0.00 0.00 0.00 2.52
1474 1811 3.369756 GCACAATGTTGATTCATGCCTTG 59.630 43.478 0.00 2.33 29.64 3.61
1477 1814 5.119588 CACAATGTTGATTCATGCCTTGAAC 59.880 40.000 0.00 0.00 46.80 3.18
1484 1821 4.020928 TGATTCATGCCTTGAACTGCATTT 60.021 37.500 1.66 0.00 46.80 2.32
1486 1823 5.465532 TTCATGCCTTGAACTGCATTTAA 57.534 34.783 0.00 0.00 45.52 1.52
1503 1840 7.777095 TGCATTTAATTGGGTAGTTTACATCC 58.223 34.615 0.00 0.00 0.00 3.51
1676 2013 3.123804 GACATGCCTGGTTATACAGTCG 58.876 50.000 0.00 0.00 36.75 4.18
1849 2187 1.818060 TGACATCGGAAAATGCCTTGG 59.182 47.619 0.00 0.00 0.00 3.61
1974 2313 3.889538 GGGGGTAGGTGATTAATTTGCTC 59.110 47.826 0.00 0.00 0.00 4.26
2226 2565 1.346068 CTGAGAGGGCAAGGTATAGGC 59.654 57.143 0.00 0.00 0.00 3.93
2231 2570 3.173965 GAGGGCAAGGTATAGGCTATCA 58.826 50.000 10.96 0.00 0.00 2.15
2306 2645 6.314896 GCTGCTACACAAAAGACAGATCTTAT 59.685 38.462 0.00 0.00 44.82 1.73
2324 2663 8.772250 AGATCTTATTTGAAGTATGTGAGGGAA 58.228 33.333 0.00 0.00 0.00 3.97
2392 2731 4.943705 ACTGAAACTGATTTATGATGCCGT 59.056 37.500 0.00 0.00 0.00 5.68
2450 2789 7.058525 TGAGTGCAGAGATATGGAATGAAATT 58.941 34.615 0.00 0.00 40.93 1.82
2469 2808 7.703328 TGAAATTGAACAACTTCTTGAGGTAC 58.297 34.615 9.47 0.00 28.94 3.34
2517 2856 6.942532 ACTATTTTACCCAGTGCATACATG 57.057 37.500 0.00 0.00 0.00 3.21
2520 2859 6.603940 ATTTTACCCAGTGCATACATGTTT 57.396 33.333 2.30 0.00 0.00 2.83
2527 2866 8.305046 ACCCAGTGCATACATGTTTAAATATT 57.695 30.769 2.30 0.00 0.00 1.28
2613 2952 1.065401 CAAAACTTGCGTGCTTCCTCA 59.935 47.619 0.00 0.00 0.00 3.86
2732 3071 3.181329 TGCTGAGGACCCTTCTGAAATA 58.819 45.455 0.00 0.00 0.00 1.40
2789 3128 2.662006 TCTCGTCTCTGCCATTTCTG 57.338 50.000 0.00 0.00 0.00 3.02
2948 3287 2.746362 GCCAGGATTTGACAAGTCTGAG 59.254 50.000 10.16 1.61 0.00 3.35
2967 3306 9.073475 AGTCTGAGATCAAACTATATCAGGTAC 57.927 37.037 8.22 1.94 42.72 3.34
2994 3334 2.291741 CTGACCTCACTTTTGTTGGCTC 59.708 50.000 0.00 0.00 0.00 4.70
3088 3428 8.218338 AGATAATGCTGAATTGATTTCGACTT 57.782 30.769 0.00 0.00 37.13 3.01
3107 3447 8.277490 TCGACTTTGAAGCTATCTCTAGTTAA 57.723 34.615 0.00 0.00 0.00 2.01
3127 3467 8.095937 AGTTAATTTCACTTTTAGTTAGCGCT 57.904 30.769 17.26 17.26 0.00 5.92
3128 3468 8.565416 AGTTAATTTCACTTTTAGTTAGCGCTT 58.435 29.630 18.68 0.00 0.00 4.68
3129 3469 9.815936 GTTAATTTCACTTTTAGTTAGCGCTTA 57.184 29.630 18.68 2.28 0.00 3.09
3248 3589 1.826385 ATGCACAGTTTCCCTAGCAC 58.174 50.000 0.00 0.00 36.55 4.40
3290 3631 4.043561 TCACTAAAACAATGGAAGGGCCTA 59.956 41.667 6.41 0.00 37.63 3.93
3292 3633 5.067805 CACTAAAACAATGGAAGGGCCTATC 59.932 44.000 6.41 6.84 37.63 2.08
3293 3634 3.756082 AAACAATGGAAGGGCCTATCA 57.244 42.857 6.41 9.04 37.63 2.15
3294 3635 3.979501 AACAATGGAAGGGCCTATCAT 57.020 42.857 6.41 11.21 37.63 2.45
3295 3636 3.979501 ACAATGGAAGGGCCTATCATT 57.020 42.857 21.41 21.41 37.63 2.57
3311 3654 8.563732 GGCCTATCATTCTTTTCTAGATTGTTC 58.436 37.037 0.00 0.00 36.24 3.18
3340 3683 8.579863 AGTATGAAATCAAGCTTTAAGCAGTTT 58.420 29.630 19.63 12.78 45.56 2.66
3346 3689 9.599866 AAATCAAGCTTTAAGCAGTTTTAGTTT 57.400 25.926 19.63 6.27 45.56 2.66
3424 3767 6.993786 TCGATTGTGCTGATATTAAAACCA 57.006 33.333 0.00 0.00 0.00 3.67
3428 3771 7.754924 CGATTGTGCTGATATTAAAACCAAAGT 59.245 33.333 0.00 0.00 0.00 2.66
3431 3774 7.523219 TGTGCTGATATTAAAACCAAAGTACG 58.477 34.615 0.00 0.00 0.00 3.67
3469 3884 5.688807 CTGATTCCCATAATTGTCTGTCCT 58.311 41.667 0.00 0.00 0.00 3.85
3520 3935 6.302535 TCAAATGAATTTGGCATCCTTGAT 57.697 33.333 14.19 0.00 45.39 2.57
3595 4013 9.616156 TTTCATGTACACTAGTTTAGGTCAAAA 57.384 29.630 0.00 0.00 0.00 2.44
3617 4035 5.269505 ACCATGTAGCTACTTGTGATCTC 57.730 43.478 28.28 2.11 31.59 2.75
3679 4097 0.521735 GTGGCGAAGAACCATTCCAC 59.478 55.000 0.00 0.00 39.95 4.02
3690 4108 5.623169 AGAACCATTCCACATTTTTGCAAT 58.377 33.333 0.00 0.00 0.00 3.56
3695 4113 7.096551 ACCATTCCACATTTTTGCAATAGTAC 58.903 34.615 0.00 0.00 0.00 2.73
3725 4143 8.514330 TCACCAAGTTAAATTTGTACTGTCTT 57.486 30.769 0.00 0.00 0.00 3.01
3726 4144 8.617809 TCACCAAGTTAAATTTGTACTGTCTTC 58.382 33.333 0.00 0.00 0.00 2.87
3727 4145 8.402472 CACCAAGTTAAATTTGTACTGTCTTCA 58.598 33.333 0.00 0.00 0.00 3.02
3728 4146 8.403236 ACCAAGTTAAATTTGTACTGTCTTCAC 58.597 33.333 0.00 0.00 0.00 3.18
3729 4147 7.860872 CCAAGTTAAATTTGTACTGTCTTCACC 59.139 37.037 0.00 0.00 0.00 4.02
3730 4148 8.402472 CAAGTTAAATTTGTACTGTCTTCACCA 58.598 33.333 0.00 0.00 0.00 4.17
3731 4149 8.691661 AGTTAAATTTGTACTGTCTTCACCAT 57.308 30.769 0.00 0.00 0.00 3.55
3732 4150 8.784043 AGTTAAATTTGTACTGTCTTCACCATC 58.216 33.333 0.00 0.00 0.00 3.51
3733 4151 8.564574 GTTAAATTTGTACTGTCTTCACCATCA 58.435 33.333 0.00 0.00 0.00 3.07
3734 4152 7.581213 AAATTTGTACTGTCTTCACCATCAA 57.419 32.000 0.00 0.00 0.00 2.57
3735 4153 7.581213 AATTTGTACTGTCTTCACCATCAAA 57.419 32.000 0.00 0.00 0.00 2.69
3736 4154 7.581213 ATTTGTACTGTCTTCACCATCAAAA 57.419 32.000 0.00 0.00 0.00 2.44
3737 4155 7.397892 TTTGTACTGTCTTCACCATCAAAAA 57.602 32.000 0.00 0.00 0.00 1.94
3813 4232 0.178998 TAGAGGCGGTTCGGAGCTAT 60.179 55.000 0.00 0.00 0.00 2.97
3845 4264 2.583593 GACCAGAGGCGCGTGATC 60.584 66.667 7.63 3.38 0.00 2.92
3854 4273 3.869272 CGCGTGATCAAGCTGCCC 61.869 66.667 27.21 3.01 33.62 5.36
3875 4294 2.044946 GCGATGCAGGGGAAGGTT 60.045 61.111 0.00 0.00 0.00 3.50
3878 4297 1.380380 GATGCAGGGGAAGGTTGGG 60.380 63.158 0.00 0.00 0.00 4.12
3905 4324 2.917971 CAAGTTCGTCGACAGGAATCTC 59.082 50.000 17.16 0.85 0.00 2.75
3951 4370 4.506255 GGCCTTGGGTGATCCGGG 62.506 72.222 0.00 0.00 38.76 5.73
3952 4371 4.506255 GCCTTGGGTGATCCGGGG 62.506 72.222 0.00 0.00 38.76 5.73
3954 4373 2.590092 CTTGGGTGATCCGGGGAC 59.410 66.667 0.00 0.00 38.76 4.46
3955 4374 1.995626 CTTGGGTGATCCGGGGACT 60.996 63.158 0.00 0.00 38.76 3.85
3956 4375 1.540367 TTGGGTGATCCGGGGACTT 60.540 57.895 0.00 0.00 38.76 3.01
4032 4451 0.258194 ACCCGATCTAGACCGGTTCT 59.742 55.000 24.13 10.26 43.93 3.01
4033 4452 0.953003 CCCGATCTAGACCGGTTCTC 59.047 60.000 24.13 0.90 43.93 2.87
4121 4540 7.122799 GGCATTATAGAAGTGGAAGAAAAAGGT 59.877 37.037 0.00 0.00 0.00 3.50
4252 4698 3.243907 ACGCTGTTCTTGAGTAGCTTTCT 60.244 43.478 0.00 0.00 34.13 2.52
4311 4757 0.389426 CAGCAGCCATGGAGCAAAAC 60.389 55.000 25.54 4.02 34.23 2.43
4315 4761 0.178953 AGCCATGGAGCAAAACCTGT 60.179 50.000 18.40 0.00 34.23 4.00
4316 4762 0.681175 GCCATGGAGCAAAACCTGTT 59.319 50.000 18.40 0.00 0.00 3.16
4411 4861 0.886490 GATGCCGCCATCGATCCTTT 60.886 55.000 0.00 0.00 38.59 3.11
4424 4874 1.414550 GATCCTTTCCTTCTCCCGGAG 59.585 57.143 8.30 8.30 0.00 4.63
4431 4881 2.764269 TCCTTCTCCCGGAGATCAATT 58.236 47.619 18.16 0.00 38.56 2.32
4434 4884 1.131638 TCTCCCGGAGATCAATTGGG 58.868 55.000 13.54 0.41 41.43 4.12
4437 4887 0.179018 CCCGGAGATCAATTGGGACC 60.179 60.000 0.73 4.02 42.77 4.46
4457 4914 1.497278 CCAACGCGTCAGGTGATTG 59.503 57.895 14.44 3.90 0.00 2.67
4458 4915 0.948623 CCAACGCGTCAGGTGATTGA 60.949 55.000 14.44 0.00 0.00 2.57
4459 4916 0.865111 CAACGCGTCAGGTGATTGAA 59.135 50.000 14.44 0.00 0.00 2.69
4509 4966 0.665835 CAACACGCAAAAGTGGCCTA 59.334 50.000 3.32 0.00 45.80 3.93
4528 4985 2.990066 ATCTTTTAGGCACTCGAGGG 57.010 50.000 18.41 15.12 41.75 4.30
4529 4986 1.640917 TCTTTTAGGCACTCGAGGGT 58.359 50.000 17.64 0.00 41.75 4.34
4530 4987 1.275291 TCTTTTAGGCACTCGAGGGTG 59.725 52.381 17.64 8.56 41.75 4.61
4531 4988 0.323629 TTTTAGGCACTCGAGGGTGG 59.676 55.000 17.64 3.93 41.75 4.61
4532 4989 1.550130 TTTAGGCACTCGAGGGTGGG 61.550 60.000 17.64 1.32 41.75 4.61
4533 4990 2.741878 TTAGGCACTCGAGGGTGGGT 62.742 60.000 17.64 0.94 41.75 4.51
4534 4991 4.394712 GGCACTCGAGGGTGGGTG 62.395 72.222 17.64 6.19 37.65 4.61
4536 4993 4.742201 CACTCGAGGGTGGGTGCG 62.742 72.222 18.41 0.00 33.95 5.34
4538 4995 4.436998 CTCGAGGGTGGGTGCGTC 62.437 72.222 3.91 0.00 0.00 5.19
4553 5010 1.583054 GCGTCGGCAAGGATAATTCT 58.417 50.000 0.00 0.00 39.62 2.40
4554 5011 1.940613 GCGTCGGCAAGGATAATTCTT 59.059 47.619 0.00 0.00 39.62 2.52
4555 5012 2.032808 GCGTCGGCAAGGATAATTCTTC 60.033 50.000 0.00 0.00 39.62 2.87
4556 5013 3.458189 CGTCGGCAAGGATAATTCTTCT 58.542 45.455 0.00 0.00 0.00 2.85
4557 5014 3.246226 CGTCGGCAAGGATAATTCTTCTG 59.754 47.826 0.00 0.00 0.00 3.02
4558 5015 3.561725 GTCGGCAAGGATAATTCTTCTGG 59.438 47.826 0.00 0.00 0.00 3.86
4559 5016 3.454447 TCGGCAAGGATAATTCTTCTGGA 59.546 43.478 0.00 0.00 0.00 3.86
4560 5017 3.812053 CGGCAAGGATAATTCTTCTGGAG 59.188 47.826 0.00 0.00 0.00 3.86
4561 5018 4.684485 CGGCAAGGATAATTCTTCTGGAGT 60.684 45.833 0.00 0.00 0.00 3.85
4562 5019 5.196695 GGCAAGGATAATTCTTCTGGAGTT 58.803 41.667 0.00 0.00 0.00 3.01
4563 5020 5.067023 GGCAAGGATAATTCTTCTGGAGTTG 59.933 44.000 0.00 0.00 0.00 3.16
4564 5021 5.649831 GCAAGGATAATTCTTCTGGAGTTGT 59.350 40.000 0.00 0.00 0.00 3.32
4565 5022 6.151817 GCAAGGATAATTCTTCTGGAGTTGTT 59.848 38.462 0.00 0.00 0.00 2.83
4566 5023 7.533426 CAAGGATAATTCTTCTGGAGTTGTTG 58.467 38.462 0.00 0.00 0.00 3.33
4567 5024 6.784031 AGGATAATTCTTCTGGAGTTGTTGT 58.216 36.000 0.00 0.00 0.00 3.32
4568 5025 7.234355 AGGATAATTCTTCTGGAGTTGTTGTT 58.766 34.615 0.00 0.00 0.00 2.83
4569 5026 7.725844 AGGATAATTCTTCTGGAGTTGTTGTTT 59.274 33.333 0.00 0.00 0.00 2.83
4570 5027 8.360390 GGATAATTCTTCTGGAGTTGTTGTTTT 58.640 33.333 0.00 0.00 0.00 2.43
4571 5028 9.750125 GATAATTCTTCTGGAGTTGTTGTTTTT 57.250 29.630 0.00 0.00 0.00 1.94
4572 5029 9.750125 ATAATTCTTCTGGAGTTGTTGTTTTTC 57.250 29.630 0.00 0.00 0.00 2.29
4573 5030 5.229921 TCTTCTGGAGTTGTTGTTTTTCG 57.770 39.130 0.00 0.00 0.00 3.46
4574 5031 4.095782 TCTTCTGGAGTTGTTGTTTTTCGG 59.904 41.667 0.00 0.00 0.00 4.30
4575 5032 3.611970 TCTGGAGTTGTTGTTTTTCGGA 58.388 40.909 0.00 0.00 0.00 4.55
4576 5033 3.625764 TCTGGAGTTGTTGTTTTTCGGAG 59.374 43.478 0.00 0.00 0.00 4.63
4577 5034 3.611970 TGGAGTTGTTGTTTTTCGGAGA 58.388 40.909 0.00 0.00 0.00 3.71
4578 5035 4.204012 TGGAGTTGTTGTTTTTCGGAGAT 58.796 39.130 0.00 0.00 35.04 2.75
4579 5036 4.036262 TGGAGTTGTTGTTTTTCGGAGATG 59.964 41.667 0.00 0.00 35.04 2.90
4580 5037 4.274950 GGAGTTGTTGTTTTTCGGAGATGA 59.725 41.667 0.00 0.00 35.04 2.92
4581 5038 5.220970 GGAGTTGTTGTTTTTCGGAGATGAA 60.221 40.000 0.00 0.00 35.04 2.57
4582 5039 5.578776 AGTTGTTGTTTTTCGGAGATGAAC 58.421 37.500 0.00 0.00 35.04 3.18
4583 5040 4.203950 TGTTGTTTTTCGGAGATGAACG 57.796 40.909 0.00 0.00 35.41 3.95
4584 5041 3.623960 TGTTGTTTTTCGGAGATGAACGT 59.376 39.130 0.00 0.00 35.41 3.99
4585 5042 4.095185 TGTTGTTTTTCGGAGATGAACGTT 59.905 37.500 0.00 0.00 35.41 3.99
4586 5043 4.203950 TGTTTTTCGGAGATGAACGTTG 57.796 40.909 5.00 0.00 35.41 4.10
4587 5044 3.002862 TGTTTTTCGGAGATGAACGTTGG 59.997 43.478 5.00 0.00 35.41 3.77
4588 5045 2.536761 TTTCGGAGATGAACGTTGGT 57.463 45.000 5.00 0.00 35.04 3.67
4589 5046 2.074547 TTCGGAGATGAACGTTGGTC 57.925 50.000 5.00 3.19 35.04 4.02
4590 5047 0.109458 TCGGAGATGAACGTTGGTCG 60.109 55.000 5.00 1.14 46.00 4.79
4591 5048 0.109458 CGGAGATGAACGTTGGTCGA 60.109 55.000 5.00 0.00 42.86 4.20
4592 5049 1.630148 GGAGATGAACGTTGGTCGAG 58.370 55.000 5.00 0.00 42.86 4.04
4593 5050 1.201647 GGAGATGAACGTTGGTCGAGA 59.798 52.381 5.00 0.00 42.86 4.04
4594 5051 2.251893 GAGATGAACGTTGGTCGAGAC 58.748 52.381 5.00 0.00 42.86 3.36
4595 5052 0.982673 GATGAACGTTGGTCGAGACG 59.017 55.000 5.00 12.64 44.34 4.18
4596 5053 1.007336 ATGAACGTTGGTCGAGACGC 61.007 55.000 5.00 2.50 42.67 5.19
4597 5054 2.704193 GAACGTTGGTCGAGACGCG 61.704 63.158 5.00 3.53 42.67 6.01
4598 5055 4.695231 ACGTTGGTCGAGACGCGG 62.695 66.667 12.47 0.00 42.67 6.46
4600 5057 4.719369 GTTGGTCGAGACGCGGCT 62.719 66.667 18.34 18.34 45.74 5.52
4601 5058 3.986006 TTGGTCGAGACGCGGCTT 61.986 61.111 19.64 0.00 45.74 4.35
4602 5059 3.909258 TTGGTCGAGACGCGGCTTC 62.909 63.158 19.64 10.28 45.74 3.86
4615 5072 2.806288 CGGCTTCCGTTGTTGATAAG 57.194 50.000 0.00 0.00 42.73 1.73
4616 5073 2.073816 CGGCTTCCGTTGTTGATAAGT 58.926 47.619 0.00 0.00 42.73 2.24
4617 5074 2.482721 CGGCTTCCGTTGTTGATAAGTT 59.517 45.455 0.00 0.00 42.73 2.66
4618 5075 3.058501 CGGCTTCCGTTGTTGATAAGTTT 60.059 43.478 0.00 0.00 42.73 2.66
4619 5076 4.152759 CGGCTTCCGTTGTTGATAAGTTTA 59.847 41.667 0.00 0.00 42.73 2.01
4620 5077 5.628134 GGCTTCCGTTGTTGATAAGTTTAG 58.372 41.667 0.00 0.00 0.00 1.85
4621 5078 5.410439 GGCTTCCGTTGTTGATAAGTTTAGA 59.590 40.000 0.00 0.00 0.00 2.10
4622 5079 6.072893 GGCTTCCGTTGTTGATAAGTTTAGAA 60.073 38.462 0.00 0.00 0.00 2.10
4623 5080 6.795593 GCTTCCGTTGTTGATAAGTTTAGAAC 59.204 38.462 0.00 0.00 0.00 3.01
4624 5081 7.519328 GCTTCCGTTGTTGATAAGTTTAGAACA 60.519 37.037 0.00 0.00 0.00 3.18
4625 5082 7.972832 TCCGTTGTTGATAAGTTTAGAACAT 57.027 32.000 0.00 0.00 0.00 2.71
4626 5083 9.491675 TTCCGTTGTTGATAAGTTTAGAACATA 57.508 29.630 0.00 0.00 0.00 2.29
4627 5084 8.928733 TCCGTTGTTGATAAGTTTAGAACATAC 58.071 33.333 0.00 0.00 0.00 2.39
4628 5085 8.932791 CCGTTGTTGATAAGTTTAGAACATACT 58.067 33.333 0.00 0.00 0.00 2.12
4629 5086 9.953825 CGTTGTTGATAAGTTTAGAACATACTC 57.046 33.333 0.00 0.00 0.00 2.59
4639 5096 9.436957 AAGTTTAGAACATACTCCTATGTGTTG 57.563 33.333 0.00 0.00 41.92 3.33
4640 5097 8.594550 AGTTTAGAACATACTCCTATGTGTTGT 58.405 33.333 0.00 0.00 41.92 3.32
4641 5098 8.656849 GTTTAGAACATACTCCTATGTGTTGTG 58.343 37.037 0.00 0.00 41.92 3.33
4642 5099 5.734720 AGAACATACTCCTATGTGTTGTGG 58.265 41.667 0.00 0.00 41.92 4.17
4643 5100 5.248477 AGAACATACTCCTATGTGTTGTGGT 59.752 40.000 0.00 0.00 41.92 4.16
4644 5101 5.499004 ACATACTCCTATGTGTTGTGGTT 57.501 39.130 0.00 0.00 41.32 3.67
4645 5102 5.245531 ACATACTCCTATGTGTTGTGGTTG 58.754 41.667 0.00 0.00 41.32 3.77
4646 5103 3.857157 ACTCCTATGTGTTGTGGTTGT 57.143 42.857 0.00 0.00 0.00 3.32
4647 5104 4.967084 ACTCCTATGTGTTGTGGTTGTA 57.033 40.909 0.00 0.00 0.00 2.41
4648 5105 5.499004 ACTCCTATGTGTTGTGGTTGTAT 57.501 39.130 0.00 0.00 0.00 2.29
4649 5106 5.876357 ACTCCTATGTGTTGTGGTTGTATT 58.124 37.500 0.00 0.00 0.00 1.89
4650 5107 5.705441 ACTCCTATGTGTTGTGGTTGTATTG 59.295 40.000 0.00 0.00 0.00 1.90
4651 5108 5.626142 TCCTATGTGTTGTGGTTGTATTGT 58.374 37.500 0.00 0.00 0.00 2.71
4652 5109 5.471797 TCCTATGTGTTGTGGTTGTATTGTG 59.528 40.000 0.00 0.00 0.00 3.33
4653 5110 5.240623 CCTATGTGTTGTGGTTGTATTGTGT 59.759 40.000 0.00 0.00 0.00 3.72
4654 5111 4.362932 TGTGTTGTGGTTGTATTGTGTG 57.637 40.909 0.00 0.00 0.00 3.82
4655 5112 3.759086 TGTGTTGTGGTTGTATTGTGTGT 59.241 39.130 0.00 0.00 0.00 3.72
4656 5113 4.218635 TGTGTTGTGGTTGTATTGTGTGTT 59.781 37.500 0.00 0.00 0.00 3.32
4657 5114 5.164954 GTGTTGTGGTTGTATTGTGTGTTT 58.835 37.500 0.00 0.00 0.00 2.83
4658 5115 5.061560 GTGTTGTGGTTGTATTGTGTGTTTG 59.938 40.000 0.00 0.00 0.00 2.93
4659 5116 5.048013 TGTTGTGGTTGTATTGTGTGTTTGA 60.048 36.000 0.00 0.00 0.00 2.69
4660 5117 5.242069 TGTGGTTGTATTGTGTGTTTGAG 57.758 39.130 0.00 0.00 0.00 3.02
4661 5118 4.041723 GTGGTTGTATTGTGTGTTTGAGC 58.958 43.478 0.00 0.00 0.00 4.26
4662 5119 3.951037 TGGTTGTATTGTGTGTTTGAGCT 59.049 39.130 0.00 0.00 0.00 4.09
4663 5120 4.400884 TGGTTGTATTGTGTGTTTGAGCTT 59.599 37.500 0.00 0.00 0.00 3.74
4664 5121 4.739716 GGTTGTATTGTGTGTTTGAGCTTG 59.260 41.667 0.00 0.00 0.00 4.01
4665 5122 5.449862 GGTTGTATTGTGTGTTTGAGCTTGA 60.450 40.000 0.00 0.00 0.00 3.02
4666 5123 5.422666 TGTATTGTGTGTTTGAGCTTGAG 57.577 39.130 0.00 0.00 0.00 3.02
4667 5124 4.881273 TGTATTGTGTGTTTGAGCTTGAGT 59.119 37.500 0.00 0.00 0.00 3.41
4668 5125 6.052360 TGTATTGTGTGTTTGAGCTTGAGTA 58.948 36.000 0.00 0.00 0.00 2.59
4669 5126 5.679734 ATTGTGTGTTTGAGCTTGAGTAG 57.320 39.130 0.00 0.00 0.00 2.57
4670 5127 3.466836 TGTGTGTTTGAGCTTGAGTAGG 58.533 45.455 0.00 0.00 0.00 3.18
4671 5128 3.133901 TGTGTGTTTGAGCTTGAGTAGGA 59.866 43.478 0.00 0.00 0.00 2.94
4672 5129 4.202357 TGTGTGTTTGAGCTTGAGTAGGAT 60.202 41.667 0.00 0.00 0.00 3.24
4673 5130 4.757149 GTGTGTTTGAGCTTGAGTAGGATT 59.243 41.667 0.00 0.00 0.00 3.01
4674 5131 5.239525 GTGTGTTTGAGCTTGAGTAGGATTT 59.760 40.000 0.00 0.00 0.00 2.17
4675 5132 5.239306 TGTGTTTGAGCTTGAGTAGGATTTG 59.761 40.000 0.00 0.00 0.00 2.32
4676 5133 4.216257 TGTTTGAGCTTGAGTAGGATTTGC 59.784 41.667 0.00 0.00 0.00 3.68
4677 5134 2.621338 TGAGCTTGAGTAGGATTTGCG 58.379 47.619 0.00 0.00 0.00 4.85
4678 5135 1.328986 GAGCTTGAGTAGGATTTGCGC 59.671 52.381 0.00 0.00 0.00 6.09
4679 5136 0.378610 GCTTGAGTAGGATTTGCGCC 59.621 55.000 4.18 0.00 0.00 6.53
4680 5137 2.014068 GCTTGAGTAGGATTTGCGCCT 61.014 52.381 4.18 0.00 39.56 5.52
4681 5138 1.936547 CTTGAGTAGGATTTGCGCCTC 59.063 52.381 4.18 1.51 36.96 4.70
4682 5139 0.901827 TGAGTAGGATTTGCGCCTCA 59.098 50.000 4.18 4.61 36.96 3.86
4683 5140 1.291132 GAGTAGGATTTGCGCCTCAC 58.709 55.000 4.18 0.00 36.96 3.51
4684 5141 0.613260 AGTAGGATTTGCGCCTCACA 59.387 50.000 4.18 0.00 36.96 3.58
4685 5142 1.009829 GTAGGATTTGCGCCTCACAG 58.990 55.000 4.18 0.00 36.96 3.66
4686 5143 0.107703 TAGGATTTGCGCCTCACAGG 60.108 55.000 4.18 0.00 38.80 4.00
4687 5144 2.409870 GGATTTGCGCCTCACAGGG 61.410 63.158 4.18 0.00 35.37 4.45
4688 5145 1.675641 GATTTGCGCCTCACAGGGT 60.676 57.895 4.18 0.00 35.37 4.34
4689 5146 1.228552 ATTTGCGCCTCACAGGGTT 60.229 52.632 4.18 0.00 35.37 4.11
4690 5147 1.526575 ATTTGCGCCTCACAGGGTTG 61.527 55.000 4.18 0.00 35.37 3.77
4691 5148 2.902423 TTTGCGCCTCACAGGGTTGT 62.902 55.000 4.18 0.00 35.37 3.32
4692 5149 3.050275 GCGCCTCACAGGGTTGTC 61.050 66.667 0.00 0.00 35.37 3.18
4693 5150 2.425592 CGCCTCACAGGGTTGTCA 59.574 61.111 0.00 0.00 35.37 3.58
4694 5151 1.003355 CGCCTCACAGGGTTGTCAT 60.003 57.895 0.00 0.00 35.37 3.06
4695 5152 0.606401 CGCCTCACAGGGTTGTCATT 60.606 55.000 0.00 0.00 35.37 2.57
4696 5153 1.620822 GCCTCACAGGGTTGTCATTT 58.379 50.000 0.00 0.00 35.37 2.32
4697 5154 1.963515 GCCTCACAGGGTTGTCATTTT 59.036 47.619 0.00 0.00 35.37 1.82
4698 5155 2.365293 GCCTCACAGGGTTGTCATTTTT 59.635 45.455 0.00 0.00 35.37 1.94
4718 5175 4.434713 TTTTTATCAAAGAAGGGCTCGC 57.565 40.909 0.00 0.00 0.00 5.03
4719 5176 2.038387 TTATCAAAGAAGGGCTCGCC 57.962 50.000 0.00 0.00 0.00 5.54
4729 5186 4.176752 GGCTCGCCCCTTCCGATT 62.177 66.667 0.00 0.00 33.83 3.34
4730 5187 2.124695 GCTCGCCCCTTCCGATTT 60.125 61.111 0.00 0.00 33.83 2.17
4731 5188 1.749258 GCTCGCCCCTTCCGATTTT 60.749 57.895 0.00 0.00 33.83 1.82
4732 5189 1.715862 GCTCGCCCCTTCCGATTTTC 61.716 60.000 0.00 0.00 33.83 2.29
4733 5190 0.392461 CTCGCCCCTTCCGATTTTCA 60.392 55.000 0.00 0.00 33.83 2.69
4734 5191 0.254747 TCGCCCCTTCCGATTTTCAT 59.745 50.000 0.00 0.00 0.00 2.57
4735 5192 1.102978 CGCCCCTTCCGATTTTCATT 58.897 50.000 0.00 0.00 0.00 2.57
4736 5193 2.092861 TCGCCCCTTCCGATTTTCATTA 60.093 45.455 0.00 0.00 0.00 1.90
4737 5194 2.032924 CGCCCCTTCCGATTTTCATTAC 59.967 50.000 0.00 0.00 0.00 1.89
4738 5195 3.288092 GCCCCTTCCGATTTTCATTACT 58.712 45.455 0.00 0.00 0.00 2.24
4739 5196 3.066760 GCCCCTTCCGATTTTCATTACTG 59.933 47.826 0.00 0.00 0.00 2.74
4740 5197 4.523083 CCCCTTCCGATTTTCATTACTGA 58.477 43.478 0.00 0.00 0.00 3.41
4741 5198 4.947388 CCCCTTCCGATTTTCATTACTGAA 59.053 41.667 0.00 0.00 39.62 3.02
4742 5199 5.417580 CCCCTTCCGATTTTCATTACTGAAA 59.582 40.000 4.26 4.26 46.92 2.69
4754 5211 7.883391 TTCATTACTGAAAACCAACCTTACA 57.117 32.000 0.00 0.00 38.43 2.41
4755 5212 7.504924 TCATTACTGAAAACCAACCTTACAG 57.495 36.000 0.00 0.00 0.00 2.74
4756 5213 7.284074 TCATTACTGAAAACCAACCTTACAGA 58.716 34.615 0.00 0.00 0.00 3.41
4757 5214 7.776030 TCATTACTGAAAACCAACCTTACAGAA 59.224 33.333 0.00 0.00 0.00 3.02
4758 5215 8.576442 CATTACTGAAAACCAACCTTACAGAAT 58.424 33.333 0.00 0.00 0.00 2.40
4759 5216 8.528044 TTACTGAAAACCAACCTTACAGAATT 57.472 30.769 0.00 0.00 0.00 2.17
4760 5217 7.039313 ACTGAAAACCAACCTTACAGAATTC 57.961 36.000 0.00 0.00 0.00 2.17
4761 5218 6.605594 ACTGAAAACCAACCTTACAGAATTCA 59.394 34.615 8.44 0.00 0.00 2.57
4762 5219 7.038154 TGAAAACCAACCTTACAGAATTCAG 57.962 36.000 8.44 1.65 0.00 3.02
4763 5220 6.831353 TGAAAACCAACCTTACAGAATTCAGA 59.169 34.615 8.44 0.00 0.00 3.27
4764 5221 7.340743 TGAAAACCAACCTTACAGAATTCAGAA 59.659 33.333 8.44 0.00 0.00 3.02
4765 5222 6.884280 AACCAACCTTACAGAATTCAGAAG 57.116 37.500 8.44 7.50 0.00 2.85
4766 5223 6.187727 ACCAACCTTACAGAATTCAGAAGA 57.812 37.500 8.44 0.00 0.00 2.87
4767 5224 5.998363 ACCAACCTTACAGAATTCAGAAGAC 59.002 40.000 8.44 0.00 0.00 3.01
4768 5225 5.997746 CCAACCTTACAGAATTCAGAAGACA 59.002 40.000 8.44 0.00 0.00 3.41
4769 5226 6.148480 CCAACCTTACAGAATTCAGAAGACAG 59.852 42.308 8.44 0.00 0.00 3.51
4770 5227 6.672266 ACCTTACAGAATTCAGAAGACAGA 57.328 37.500 8.44 0.00 0.00 3.41
4771 5228 6.459923 ACCTTACAGAATTCAGAAGACAGAC 58.540 40.000 8.44 0.00 0.00 3.51
4772 5229 6.042093 ACCTTACAGAATTCAGAAGACAGACA 59.958 38.462 8.44 0.00 0.00 3.41
4773 5230 6.589523 CCTTACAGAATTCAGAAGACAGACAG 59.410 42.308 8.44 0.00 0.00 3.51
4774 5231 5.543507 ACAGAATTCAGAAGACAGACAGT 57.456 39.130 8.44 0.00 0.00 3.55
4775 5232 6.656632 ACAGAATTCAGAAGACAGACAGTA 57.343 37.500 8.44 0.00 0.00 2.74
4776 5233 6.451393 ACAGAATTCAGAAGACAGACAGTAC 58.549 40.000 8.44 0.00 0.00 2.73
4777 5234 5.866633 CAGAATTCAGAAGACAGACAGTACC 59.133 44.000 8.44 0.00 0.00 3.34
4778 5235 5.777732 AGAATTCAGAAGACAGACAGTACCT 59.222 40.000 8.44 0.00 0.00 3.08
4779 5236 6.948886 AGAATTCAGAAGACAGACAGTACCTA 59.051 38.462 8.44 0.00 0.00 3.08
4780 5237 7.451877 AGAATTCAGAAGACAGACAGTACCTAA 59.548 37.037 8.44 0.00 0.00 2.69
4781 5238 5.961396 TCAGAAGACAGACAGTACCTAAC 57.039 43.478 0.00 0.00 0.00 2.34
4782 5239 5.382616 TCAGAAGACAGACAGTACCTAACA 58.617 41.667 0.00 0.00 0.00 2.41
4783 5240 6.010850 TCAGAAGACAGACAGTACCTAACAT 58.989 40.000 0.00 0.00 0.00 2.71
4784 5241 6.071896 TCAGAAGACAGACAGTACCTAACATG 60.072 42.308 0.00 0.00 0.00 3.21
4785 5242 5.775701 AGAAGACAGACAGTACCTAACATGT 59.224 40.000 0.00 0.00 0.00 3.21
4786 5243 5.646577 AGACAGACAGTACCTAACATGTC 57.353 43.478 0.00 3.19 41.86 3.06
4787 5244 4.463186 AGACAGACAGTACCTAACATGTCC 59.537 45.833 0.00 0.00 42.39 4.02
4788 5245 4.417437 ACAGACAGTACCTAACATGTCCT 58.583 43.478 0.00 0.00 42.39 3.85
4789 5246 4.463186 ACAGACAGTACCTAACATGTCCTC 59.537 45.833 0.00 0.00 42.39 3.71
4790 5247 4.024670 AGACAGTACCTAACATGTCCTCC 58.975 47.826 0.00 0.00 42.39 4.30
4791 5248 4.024670 GACAGTACCTAACATGTCCTCCT 58.975 47.826 0.00 0.00 36.83 3.69
4792 5249 4.024670 ACAGTACCTAACATGTCCTCCTC 58.975 47.826 0.00 0.00 0.00 3.71
4793 5250 4.023980 CAGTACCTAACATGTCCTCCTCA 58.976 47.826 0.00 0.00 0.00 3.86
4794 5251 4.024670 AGTACCTAACATGTCCTCCTCAC 58.975 47.826 0.00 0.00 0.00 3.51
4795 5252 2.902608 ACCTAACATGTCCTCCTCACA 58.097 47.619 0.00 0.00 0.00 3.58
4796 5253 2.834549 ACCTAACATGTCCTCCTCACAG 59.165 50.000 0.00 0.00 0.00 3.66
4797 5254 2.169352 CCTAACATGTCCTCCTCACAGG 59.831 54.545 0.00 0.00 36.46 4.00
4798 5255 0.987294 AACATGTCCTCCTCACAGGG 59.013 55.000 0.00 0.00 35.59 4.45
4799 5256 0.178891 ACATGTCCTCCTCACAGGGT 60.179 55.000 0.00 0.00 35.59 4.34
4800 5257 0.987294 CATGTCCTCCTCACAGGGTT 59.013 55.000 0.00 0.00 35.59 4.11
4801 5258 0.987294 ATGTCCTCCTCACAGGGTTG 59.013 55.000 0.00 0.00 35.59 3.77
4802 5259 0.399949 TGTCCTCCTCACAGGGTTGT 60.400 55.000 0.00 0.00 35.59 3.32
4803 5260 0.321996 GTCCTCCTCACAGGGTTGTC 59.678 60.000 0.00 0.00 35.59 3.18
4804 5261 1.185618 TCCTCCTCACAGGGTTGTCG 61.186 60.000 0.00 0.00 35.59 4.35
4805 5262 1.472662 CCTCCTCACAGGGTTGTCGT 61.473 60.000 0.00 0.00 35.59 4.34
4806 5263 0.319900 CTCCTCACAGGGTTGTCGTG 60.320 60.000 0.00 0.00 35.59 4.35
4807 5264 1.301716 CCTCACAGGGTTGTCGTGG 60.302 63.158 0.00 0.00 34.62 4.94
4808 5265 1.301716 CTCACAGGGTTGTCGTGGG 60.302 63.158 0.00 0.00 34.62 4.61
4809 5266 1.754380 CTCACAGGGTTGTCGTGGGA 61.754 60.000 0.00 0.00 40.88 4.37
4810 5267 1.301716 CACAGGGTTGTCGTGGGAG 60.302 63.158 0.00 0.00 36.83 4.30
4811 5268 2.358737 CAGGGTTGTCGTGGGAGC 60.359 66.667 0.00 0.00 0.00 4.70
4812 5269 2.526873 AGGGTTGTCGTGGGAGCT 60.527 61.111 0.00 0.00 0.00 4.09
4813 5270 2.147387 AGGGTTGTCGTGGGAGCTT 61.147 57.895 0.00 0.00 0.00 3.74
4814 5271 1.966451 GGGTTGTCGTGGGAGCTTG 60.966 63.158 0.00 0.00 0.00 4.01
4815 5272 1.227853 GGTTGTCGTGGGAGCTTGT 60.228 57.895 0.00 0.00 0.00 3.16
4816 5273 1.228657 GGTTGTCGTGGGAGCTTGTC 61.229 60.000 0.00 0.00 0.00 3.18
4817 5274 0.249911 GTTGTCGTGGGAGCTTGTCT 60.250 55.000 0.00 0.00 0.00 3.41
4818 5275 0.249868 TTGTCGTGGGAGCTTGTCTG 60.250 55.000 0.00 0.00 0.00 3.51
4819 5276 1.367840 GTCGTGGGAGCTTGTCTGT 59.632 57.895 0.00 0.00 0.00 3.41
4820 5277 0.249911 GTCGTGGGAGCTTGTCTGTT 60.250 55.000 0.00 0.00 0.00 3.16
4821 5278 0.468226 TCGTGGGAGCTTGTCTGTTT 59.532 50.000 0.00 0.00 0.00 2.83
4822 5279 1.134220 TCGTGGGAGCTTGTCTGTTTT 60.134 47.619 0.00 0.00 0.00 2.43
4823 5280 1.676006 CGTGGGAGCTTGTCTGTTTTT 59.324 47.619 0.00 0.00 0.00 1.94
4824 5281 2.287009 CGTGGGAGCTTGTCTGTTTTTC 60.287 50.000 0.00 0.00 0.00 2.29
4825 5282 2.952310 GTGGGAGCTTGTCTGTTTTTCT 59.048 45.455 0.00 0.00 0.00 2.52
4826 5283 3.381590 GTGGGAGCTTGTCTGTTTTTCTT 59.618 43.478 0.00 0.00 0.00 2.52
4827 5284 3.381272 TGGGAGCTTGTCTGTTTTTCTTG 59.619 43.478 0.00 0.00 0.00 3.02
4828 5285 3.381590 GGGAGCTTGTCTGTTTTTCTTGT 59.618 43.478 0.00 0.00 0.00 3.16
4829 5286 4.142160 GGGAGCTTGTCTGTTTTTCTTGTT 60.142 41.667 0.00 0.00 0.00 2.83
4830 5287 5.037385 GGAGCTTGTCTGTTTTTCTTGTTC 58.963 41.667 0.00 0.00 0.00 3.18
4831 5288 4.998788 AGCTTGTCTGTTTTTCTTGTTCC 58.001 39.130 0.00 0.00 0.00 3.62
4832 5289 4.706962 AGCTTGTCTGTTTTTCTTGTTCCT 59.293 37.500 0.00 0.00 0.00 3.36
4833 5290 5.037385 GCTTGTCTGTTTTTCTTGTTCCTC 58.963 41.667 0.00 0.00 0.00 3.71
4834 5291 5.163612 GCTTGTCTGTTTTTCTTGTTCCTCT 60.164 40.000 0.00 0.00 0.00 3.69
4835 5292 6.038271 GCTTGTCTGTTTTTCTTGTTCCTCTA 59.962 38.462 0.00 0.00 0.00 2.43
4836 5293 6.920569 TGTCTGTTTTTCTTGTTCCTCTAC 57.079 37.500 0.00 0.00 0.00 2.59
4837 5294 5.820947 TGTCTGTTTTTCTTGTTCCTCTACC 59.179 40.000 0.00 0.00 0.00 3.18
4838 5295 6.056236 GTCTGTTTTTCTTGTTCCTCTACCT 58.944 40.000 0.00 0.00 0.00 3.08
4839 5296 6.542735 GTCTGTTTTTCTTGTTCCTCTACCTT 59.457 38.462 0.00 0.00 0.00 3.50
4840 5297 6.766467 TCTGTTTTTCTTGTTCCTCTACCTTC 59.234 38.462 0.00 0.00 0.00 3.46
4841 5298 6.659824 TGTTTTTCTTGTTCCTCTACCTTCT 58.340 36.000 0.00 0.00 0.00 2.85
4842 5299 7.798071 TGTTTTTCTTGTTCCTCTACCTTCTA 58.202 34.615 0.00 0.00 0.00 2.10
4843 5300 8.437575 TGTTTTTCTTGTTCCTCTACCTTCTAT 58.562 33.333 0.00 0.00 0.00 1.98
4844 5301 8.722394 GTTTTTCTTGTTCCTCTACCTTCTATG 58.278 37.037 0.00 0.00 0.00 2.23
4845 5302 7.792364 TTTCTTGTTCCTCTACCTTCTATGA 57.208 36.000 0.00 0.00 0.00 2.15
4846 5303 7.792364 TTCTTGTTCCTCTACCTTCTATGAA 57.208 36.000 0.00 0.00 0.00 2.57
4847 5304 7.411486 TCTTGTTCCTCTACCTTCTATGAAG 57.589 40.000 0.70 0.70 0.00 3.02
4848 5305 5.599999 TGTTCCTCTACCTTCTATGAAGC 57.400 43.478 2.08 0.00 0.00 3.86
4849 5306 5.273208 TGTTCCTCTACCTTCTATGAAGCT 58.727 41.667 2.08 0.00 0.00 3.74
4850 5307 6.432581 TGTTCCTCTACCTTCTATGAAGCTA 58.567 40.000 2.08 0.00 0.00 3.32
4851 5308 6.895756 TGTTCCTCTACCTTCTATGAAGCTAA 59.104 38.462 2.08 0.00 0.00 3.09
4852 5309 7.068839 TGTTCCTCTACCTTCTATGAAGCTAAG 59.931 40.741 2.08 0.00 0.00 2.18
4853 5310 6.071984 TCCTCTACCTTCTATGAAGCTAAGG 58.928 44.000 8.83 8.83 43.42 2.69
4854 5311 5.279256 CCTCTACCTTCTATGAAGCTAAGGC 60.279 48.000 10.09 0.00 41.87 4.35
4855 5312 5.208890 TCTACCTTCTATGAAGCTAAGGCA 58.791 41.667 10.09 0.00 41.87 4.75
4856 5313 4.143986 ACCTTCTATGAAGCTAAGGCAC 57.856 45.455 10.09 0.00 41.87 5.01
4857 5314 3.519510 ACCTTCTATGAAGCTAAGGCACA 59.480 43.478 10.09 0.00 41.87 4.57
4858 5315 3.873952 CCTTCTATGAAGCTAAGGCACAC 59.126 47.826 0.00 0.00 41.70 3.82
4859 5316 4.507710 CTTCTATGAAGCTAAGGCACACA 58.492 43.478 0.00 0.00 41.70 3.72
4860 5317 4.128925 TCTATGAAGCTAAGGCACACAG 57.871 45.455 0.00 0.00 41.70 3.66
4861 5318 2.867109 ATGAAGCTAAGGCACACAGT 57.133 45.000 0.00 0.00 41.70 3.55
4862 5319 2.169832 TGAAGCTAAGGCACACAGTC 57.830 50.000 0.00 0.00 41.70 3.51
4863 5320 1.694150 TGAAGCTAAGGCACACAGTCT 59.306 47.619 0.00 0.00 41.70 3.24
4864 5321 2.072298 GAAGCTAAGGCACACAGTCTG 58.928 52.381 0.00 0.00 41.70 3.51
4865 5322 0.321122 AGCTAAGGCACACAGTCTGC 60.321 55.000 0.00 0.00 41.70 4.26
4866 5323 1.630244 GCTAAGGCACACAGTCTGCG 61.630 60.000 0.00 0.00 38.54 5.18
4867 5324 0.319900 CTAAGGCACACAGTCTGCGT 60.320 55.000 0.00 0.00 35.31 5.24
4868 5325 0.599991 TAAGGCACACAGTCTGCGTG 60.600 55.000 15.31 15.31 40.32 5.34
4869 5326 3.349006 GGCACACAGTCTGCGTGG 61.349 66.667 19.86 5.01 38.74 4.94
4870 5327 2.588877 GCACACAGTCTGCGTGGT 60.589 61.111 19.86 2.75 38.74 4.16
4871 5328 2.598632 GCACACAGTCTGCGTGGTC 61.599 63.158 19.86 3.55 38.74 4.02
4872 5329 1.068083 CACACAGTCTGCGTGGTCT 59.932 57.895 12.37 0.00 38.74 3.85
4873 5330 0.941463 CACACAGTCTGCGTGGTCTC 60.941 60.000 12.37 0.00 38.74 3.36
4874 5331 1.730902 CACAGTCTGCGTGGTCTCG 60.731 63.158 0.00 0.00 0.00 4.04
4875 5332 2.126307 CAGTCTGCGTGGTCTCGG 60.126 66.667 0.00 0.00 0.00 4.63
4876 5333 2.282251 AGTCTGCGTGGTCTCGGA 60.282 61.111 0.00 0.00 0.00 4.55
4877 5334 1.901948 AGTCTGCGTGGTCTCGGAA 60.902 57.895 0.00 0.00 0.00 4.30
4878 5335 1.006571 GTCTGCGTGGTCTCGGAAA 60.007 57.895 0.00 0.00 0.00 3.13
4879 5336 0.599204 GTCTGCGTGGTCTCGGAAAA 60.599 55.000 0.00 0.00 0.00 2.29
4880 5337 0.105224 TCTGCGTGGTCTCGGAAAAA 59.895 50.000 0.00 0.00 0.00 1.94
4896 5353 2.861147 AAAAACTAGCGGCCTCTCTT 57.139 45.000 0.00 0.00 0.00 2.85
4897 5354 2.388310 AAAACTAGCGGCCTCTCTTC 57.612 50.000 0.00 0.00 0.00 2.87
4898 5355 1.562783 AAACTAGCGGCCTCTCTTCT 58.437 50.000 0.00 0.00 0.00 2.85
4899 5356 1.107945 AACTAGCGGCCTCTCTTCTC 58.892 55.000 0.00 0.00 0.00 2.87
4900 5357 0.033991 ACTAGCGGCCTCTCTTCTCA 60.034 55.000 0.00 0.00 0.00 3.27
4901 5358 0.383949 CTAGCGGCCTCTCTTCTCAC 59.616 60.000 0.00 0.00 0.00 3.51
4902 5359 0.323451 TAGCGGCCTCTCTTCTCACA 60.323 55.000 0.00 0.00 0.00 3.58
4903 5360 1.153667 GCGGCCTCTCTTCTCACAG 60.154 63.158 0.00 0.00 0.00 3.66
4904 5361 1.882989 GCGGCCTCTCTTCTCACAGT 61.883 60.000 0.00 0.00 0.00 3.55
4905 5362 1.464734 CGGCCTCTCTTCTCACAGTA 58.535 55.000 0.00 0.00 0.00 2.74
4906 5363 1.403679 CGGCCTCTCTTCTCACAGTAG 59.596 57.143 0.00 0.00 0.00 2.57
4907 5364 2.452505 GGCCTCTCTTCTCACAGTAGT 58.547 52.381 0.00 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.193536 GGTGCACGCCCTCAACTTT 61.194 57.895 11.45 0.00 0.00 2.66
26 27 1.971167 GAAATGGTGCACGCCCTCA 60.971 57.895 11.45 2.65 0.00 3.86
30 31 2.175811 GACGAAATGGTGCACGCC 59.824 61.111 11.45 0.00 0.00 5.68
72 73 1.677966 CTGTGAGGCTGCTGGCAAT 60.678 57.895 19.23 0.00 44.01 3.56
78 79 3.715097 GAGGGCTGTGAGGCTGCT 61.715 66.667 0.00 0.00 41.09 4.24
248 249 1.374125 GCGTTTGTGGAAATGCCCC 60.374 57.895 0.00 0.00 44.99 5.80
390 391 0.970937 TCGACCTCCTCGGCAAGAAT 60.971 55.000 0.00 0.00 43.16 2.40
497 498 2.749044 TCCGCTTCTCCTACGCGT 60.749 61.111 19.17 19.17 44.92 6.01
521 522 2.745100 CCACCTCCGACGTCGAGA 60.745 66.667 37.65 28.63 43.02 4.04
585 586 2.560119 CGAGATCCTGGCCTCCTCG 61.560 68.421 3.32 10.96 40.28 4.63
858 1141 2.486918 AGGGTTAACGGTTCAAGAACG 58.513 47.619 0.00 5.35 42.02 3.95
1170 1482 4.349930 AGGAAGGTAGTTTTTACCTGAGCA 59.650 41.667 6.64 0.00 46.52 4.26
1214 1531 5.471456 AGTCCTGCAGTTTTCTATCAACAAG 59.529 40.000 13.81 0.00 0.00 3.16
1215 1532 5.376625 AGTCCTGCAGTTTTCTATCAACAA 58.623 37.500 13.81 0.00 0.00 2.83
1232 1549 9.076596 GCTTTTATTTAGCAACAAATAGTCCTG 57.923 33.333 0.00 0.00 38.51 3.86
1235 1552 8.980143 TGGCTTTTATTTAGCAACAAATAGTC 57.020 30.769 0.00 0.00 40.42 2.59
1263 1580 5.968254 TCGTAGTATACATTGCAGTCCAAA 58.032 37.500 5.50 0.00 43.24 3.28
1264 1581 5.126545 ACTCGTAGTATACATTGCAGTCCAA 59.873 40.000 5.50 0.00 43.24 3.53
1400 1717 2.416701 CCCAATTGTTACACCATTCGCC 60.417 50.000 4.43 0.00 0.00 5.54
1413 1730 8.325787 TGATGTTCAGTAGTATAACCCAATTGT 58.674 33.333 4.43 0.00 0.00 2.71
1433 1761 4.754618 TGTGCGAAGTGTAAAGATGATGTT 59.245 37.500 0.00 0.00 0.00 2.71
1444 1772 4.513318 TGAATCAACATTGTGCGAAGTGTA 59.487 37.500 0.00 0.00 0.00 2.90
1448 1776 3.302434 GCATGAATCAACATTGTGCGAAG 59.698 43.478 0.00 0.00 0.00 3.79
1474 1811 8.301002 TGTAAACTACCCAATTAAATGCAGTTC 58.699 33.333 1.02 0.00 0.00 3.01
1477 1814 7.920682 GGATGTAAACTACCCAATTAAATGCAG 59.079 37.037 0.00 0.00 0.00 4.41
1484 1821 4.121317 CGCGGATGTAAACTACCCAATTA 58.879 43.478 0.00 0.00 0.00 1.40
1486 1823 2.093341 ACGCGGATGTAAACTACCCAAT 60.093 45.455 12.47 0.00 0.00 3.16
1503 1840 2.916716 AGCTGCATTTTTCAAATACGCG 59.083 40.909 3.53 3.53 0.00 6.01
1596 1933 4.880886 AAAACAAAGTGCCTGAAAATGC 57.119 36.364 0.00 0.00 0.00 3.56
1676 2013 1.739562 CTCTGCTGTCGGGTCTTGC 60.740 63.158 0.00 0.00 0.00 4.01
1849 2187 8.801715 TTTAATCAGAAAACATTCTTCAGCAC 57.198 30.769 0.00 0.00 0.00 4.40
1974 2313 7.397221 TGCTTTATCCACATCTCCCATATTAG 58.603 38.462 0.00 0.00 0.00 1.73
1989 2328 2.846206 ACCCAGATGACTGCTTTATCCA 59.154 45.455 0.00 0.00 42.25 3.41
2039 2378 2.043801 AGGTAAGACTCCAAGCTCCTCT 59.956 50.000 0.00 0.00 0.00 3.69
2189 2528 2.815647 GTAGCACCAGTCAGCCGC 60.816 66.667 0.00 0.00 0.00 6.53
2226 2565 6.676456 GCAAGGCTACAGACAAACAATGATAG 60.676 42.308 0.00 0.00 0.00 2.08
2231 2570 3.221771 TGCAAGGCTACAGACAAACAAT 58.778 40.909 0.00 0.00 0.00 2.71
2279 2618 3.133691 TCTGTCTTTTGTGTAGCAGCAG 58.866 45.455 0.00 0.00 0.00 4.24
2306 2645 5.012664 TGCTAGTTCCCTCACATACTTCAAA 59.987 40.000 0.00 0.00 0.00 2.69
2324 2663 4.887071 CCTATGTCAGTCTTCTCTGCTAGT 59.113 45.833 0.00 0.00 35.63 2.57
2450 2789 8.375506 AGATAATGTACCTCAAGAAGTTGTTCA 58.624 33.333 0.00 0.00 34.82 3.18
2550 2889 9.612620 AAGCGAGATTTTCTACAAAATTTAGTG 57.387 29.630 0.00 0.00 41.47 2.74
2613 2952 1.133041 TGATCCTCTCGGGTCCATGAT 60.133 52.381 0.00 0.00 39.88 2.45
2789 3128 2.430465 TCTGCAGAAGAATCAGTTGGC 58.570 47.619 15.67 0.00 29.54 4.52
2948 3287 8.798402 AGTAGCTGTACCTGATATAGTTTGATC 58.202 37.037 0.00 0.00 0.00 2.92
2967 3306 3.733337 ACAAAAGTGAGGTCAGTAGCTG 58.267 45.455 0.00 0.00 32.30 4.24
3107 3447 6.543736 GCTAAGCGCTAACTAAAAGTGAAAT 58.456 36.000 12.05 0.00 35.14 2.17
3129 3469 8.403236 GGTTAATATTTTTATCACTTGGACGCT 58.597 33.333 0.00 0.00 0.00 5.07
3130 3470 8.185505 TGGTTAATATTTTTATCACTTGGACGC 58.814 33.333 0.00 0.00 0.00 5.19
3131 3471 9.716507 CTGGTTAATATTTTTATCACTTGGACG 57.283 33.333 0.00 0.00 0.00 4.79
3165 3506 5.885449 TTTTCAAGTTGATGGTGGGATTT 57.115 34.783 6.36 0.00 0.00 2.17
3219 3560 5.954150 AGGGAAACTGTGCATTAATCTGAAT 59.046 36.000 0.00 0.00 0.00 2.57
3248 3589 4.273480 AGTGAAAACTCCTTTGATGTCACG 59.727 41.667 0.00 0.00 0.00 4.35
3290 3631 9.956640 ACTGAGAACAATCTAGAAAAGAATGAT 57.043 29.630 0.00 0.00 37.31 2.45
3311 3654 7.755591 TGCTTAAAGCTTGATTTCATACTGAG 58.244 34.615 0.00 0.00 42.97 3.35
3317 3660 9.415544 CTAAAACTGCTTAAAGCTTGATTTCAT 57.584 29.630 0.00 0.00 42.97 2.57
3340 3683 4.890581 AGTGGCATGTACCAAACAAACTAA 59.109 37.500 0.00 0.00 42.70 2.24
3346 3689 1.339610 GCAAGTGGCATGTACCAAACA 59.660 47.619 0.00 0.00 42.70 2.83
3424 3767 3.181504 GCACACACAGGAAAACGTACTTT 60.182 43.478 0.00 0.00 0.00 2.66
3428 3771 1.937223 CAGCACACACAGGAAAACGTA 59.063 47.619 0.00 0.00 0.00 3.57
3431 3774 3.550842 GGAATCAGCACACACAGGAAAAC 60.551 47.826 0.00 0.00 0.00 2.43
3469 3884 6.211384 TCATCTCACAGTTTGTATGGAGAAGA 59.789 38.462 0.00 0.00 35.30 2.87
3520 3935 2.428171 AGAAGCTTCTTTTGTGCTGCAA 59.572 40.909 23.49 0.00 37.11 4.08
3595 4013 4.711846 TGAGATCACAAGTAGCTACATGGT 59.288 41.667 27.51 18.05 0.00 3.55
3617 4035 1.377202 ATGCAGGCCACTAACCGTG 60.377 57.895 5.01 0.00 43.41 4.94
3623 4041 1.134310 CAGATGACATGCAGGCCACTA 60.134 52.381 5.01 0.00 0.00 2.74
3679 4097 7.975058 TGGTGATCATGTACTATTGCAAAAATG 59.025 33.333 1.71 0.00 0.00 2.32
3695 4113 9.345517 CAGTACAAATTTAACTTGGTGATCATG 57.654 33.333 0.00 0.00 0.00 3.07
3739 4157 8.067784 CGGTATATTATCAGCAACGACATTTTT 58.932 33.333 0.00 0.00 0.00 1.94
3740 4158 7.439955 TCGGTATATTATCAGCAACGACATTTT 59.560 33.333 0.00 0.00 0.00 1.82
3741 4159 6.926826 TCGGTATATTATCAGCAACGACATTT 59.073 34.615 0.00 0.00 0.00 2.32
3742 4160 6.365247 GTCGGTATATTATCAGCAACGACATT 59.635 38.462 8.99 0.00 45.08 2.71
3743 4161 5.862323 GTCGGTATATTATCAGCAACGACAT 59.138 40.000 8.99 0.00 45.08 3.06
3797 4216 1.144057 CAATAGCTCCGAACCGCCT 59.856 57.895 0.00 0.00 0.00 5.52
3813 4232 2.508439 GTCGCCGGCTTCGATCAA 60.508 61.111 26.68 0.00 38.29 2.57
3951 4370 1.599576 GAGCCTGTCCTCCAAGTCC 59.400 63.158 0.00 0.00 0.00 3.85
3952 4371 1.216710 CGAGCCTGTCCTCCAAGTC 59.783 63.158 0.00 0.00 0.00 3.01
3954 4373 1.216710 GTCGAGCCTGTCCTCCAAG 59.783 63.158 0.00 0.00 0.00 3.61
3955 4374 1.118965 TTGTCGAGCCTGTCCTCCAA 61.119 55.000 0.00 0.00 0.00 3.53
3956 4375 1.118965 TTTGTCGAGCCTGTCCTCCA 61.119 55.000 0.00 0.00 0.00 3.86
3989 4408 7.094975 GGTTTACATTACAGTGCTGTGTGATTA 60.095 37.037 14.44 1.95 44.63 1.75
4032 4451 1.134367 GATGTTGACCGAGATCACCGA 59.866 52.381 8.78 0.00 0.00 4.69
4033 4452 1.560923 GATGTTGACCGAGATCACCG 58.439 55.000 0.00 0.00 0.00 4.94
4092 4511 4.945246 TCTTCCACTTCTATAATGCCGTC 58.055 43.478 0.00 0.00 0.00 4.79
4121 4540 0.327924 AGGCATTTCATGTGGACCGA 59.672 50.000 0.00 0.00 0.00 4.69
4293 4739 1.538687 GGTTTTGCTCCATGGCTGCT 61.539 55.000 23.46 0.00 0.00 4.24
4294 4740 1.079612 GGTTTTGCTCCATGGCTGC 60.080 57.895 18.67 18.67 0.00 5.25
4295 4741 0.245539 CAGGTTTTGCTCCATGGCTG 59.754 55.000 6.96 1.84 0.00 4.85
4311 4757 3.027170 GCACGACGGCATGAACAGG 62.027 63.158 0.00 0.00 0.00 4.00
4315 4761 2.741985 CCTGCACGACGGCATGAA 60.742 61.111 10.70 0.00 43.97 2.57
4365 4814 2.307496 AGATGGGATGCGATCTCTCT 57.693 50.000 5.90 0.00 0.00 3.10
4411 4861 2.435805 CAATTGATCTCCGGGAGAAGGA 59.564 50.000 29.24 17.70 42.27 3.36
4424 4874 4.655921 TGGCGGTCCCAATTGATC 57.344 55.556 7.12 0.00 41.82 2.92
4467 4924 6.235664 TGTCCTAGTGGAATTAACTGAAACC 58.764 40.000 3.98 0.00 45.18 3.27
4476 4933 3.007074 TGCGTGTTGTCCTAGTGGAATTA 59.993 43.478 0.00 0.00 45.18 1.40
4481 4938 1.588674 TTTGCGTGTTGTCCTAGTGG 58.411 50.000 0.00 0.00 0.00 4.00
4484 4941 2.032030 CCACTTTTGCGTGTTGTCCTAG 60.032 50.000 0.00 0.00 33.07 3.02
4509 4966 2.093447 CACCCTCGAGTGCCTAAAAGAT 60.093 50.000 12.31 0.00 0.00 2.40
4533 4990 1.134521 AGAATTATCCTTGCCGACGCA 60.135 47.619 0.00 0.00 45.49 5.24
4534 4991 1.583054 AGAATTATCCTTGCCGACGC 58.417 50.000 0.00 0.00 0.00 5.19
4535 4992 3.246226 CAGAAGAATTATCCTTGCCGACG 59.754 47.826 0.00 0.00 0.00 5.12
4536 4993 3.561725 CCAGAAGAATTATCCTTGCCGAC 59.438 47.826 0.00 0.00 0.00 4.79
4537 4994 3.454447 TCCAGAAGAATTATCCTTGCCGA 59.546 43.478 0.00 0.00 0.00 5.54
4538 4995 3.808728 TCCAGAAGAATTATCCTTGCCG 58.191 45.455 0.00 0.00 0.00 5.69
4539 4996 4.786425 ACTCCAGAAGAATTATCCTTGCC 58.214 43.478 0.00 0.00 0.00 4.52
4540 4997 5.649831 ACAACTCCAGAAGAATTATCCTTGC 59.350 40.000 0.00 0.00 0.00 4.01
4541 4998 7.175641 ACAACAACTCCAGAAGAATTATCCTTG 59.824 37.037 0.00 0.00 0.00 3.61
4542 4999 7.234355 ACAACAACTCCAGAAGAATTATCCTT 58.766 34.615 0.00 0.00 0.00 3.36
4543 5000 6.784031 ACAACAACTCCAGAAGAATTATCCT 58.216 36.000 0.00 0.00 0.00 3.24
4544 5001 7.454260 AACAACAACTCCAGAAGAATTATCC 57.546 36.000 0.00 0.00 0.00 2.59
4545 5002 9.750125 AAAAACAACAACTCCAGAAGAATTATC 57.250 29.630 0.00 0.00 0.00 1.75
4546 5003 9.750125 GAAAAACAACAACTCCAGAAGAATTAT 57.250 29.630 0.00 0.00 0.00 1.28
4547 5004 7.913297 CGAAAAACAACAACTCCAGAAGAATTA 59.087 33.333 0.00 0.00 0.00 1.40
4548 5005 6.751888 CGAAAAACAACAACTCCAGAAGAATT 59.248 34.615 0.00 0.00 0.00 2.17
4549 5006 6.265577 CGAAAAACAACAACTCCAGAAGAAT 58.734 36.000 0.00 0.00 0.00 2.40
4550 5007 5.392595 CCGAAAAACAACAACTCCAGAAGAA 60.393 40.000 0.00 0.00 0.00 2.52
4551 5008 4.095782 CCGAAAAACAACAACTCCAGAAGA 59.904 41.667 0.00 0.00 0.00 2.87
4552 5009 4.095782 TCCGAAAAACAACAACTCCAGAAG 59.904 41.667 0.00 0.00 0.00 2.85
4553 5010 4.011023 TCCGAAAAACAACAACTCCAGAA 58.989 39.130 0.00 0.00 0.00 3.02
4554 5011 3.611970 TCCGAAAAACAACAACTCCAGA 58.388 40.909 0.00 0.00 0.00 3.86
4555 5012 3.625764 TCTCCGAAAAACAACAACTCCAG 59.374 43.478 0.00 0.00 0.00 3.86
4556 5013 3.611970 TCTCCGAAAAACAACAACTCCA 58.388 40.909 0.00 0.00 0.00 3.86
4557 5014 4.274950 TCATCTCCGAAAAACAACAACTCC 59.725 41.667 0.00 0.00 0.00 3.85
4558 5015 5.418310 TCATCTCCGAAAAACAACAACTC 57.582 39.130 0.00 0.00 0.00 3.01
4559 5016 5.578776 GTTCATCTCCGAAAAACAACAACT 58.421 37.500 0.00 0.00 0.00 3.16
4560 5017 4.436523 CGTTCATCTCCGAAAAACAACAAC 59.563 41.667 0.00 0.00 0.00 3.32
4561 5018 4.095185 ACGTTCATCTCCGAAAAACAACAA 59.905 37.500 0.00 0.00 0.00 2.83
4562 5019 3.623960 ACGTTCATCTCCGAAAAACAACA 59.376 39.130 0.00 0.00 0.00 3.33
4563 5020 4.205323 ACGTTCATCTCCGAAAAACAAC 57.795 40.909 0.00 0.00 0.00 3.32
4564 5021 4.496673 CCAACGTTCATCTCCGAAAAACAA 60.497 41.667 0.00 0.00 0.00 2.83
4565 5022 3.002862 CCAACGTTCATCTCCGAAAAACA 59.997 43.478 0.00 0.00 0.00 2.83
4566 5023 3.002965 ACCAACGTTCATCTCCGAAAAAC 59.997 43.478 0.00 0.00 0.00 2.43
4567 5024 3.207778 ACCAACGTTCATCTCCGAAAAA 58.792 40.909 0.00 0.00 0.00 1.94
4568 5025 2.803956 GACCAACGTTCATCTCCGAAAA 59.196 45.455 0.00 0.00 0.00 2.29
4569 5026 2.409975 GACCAACGTTCATCTCCGAAA 58.590 47.619 0.00 0.00 0.00 3.46
4570 5027 1.667756 CGACCAACGTTCATCTCCGAA 60.668 52.381 0.00 0.00 37.22 4.30
4571 5028 0.109458 CGACCAACGTTCATCTCCGA 60.109 55.000 0.00 0.00 37.22 4.55
4572 5029 0.109458 TCGACCAACGTTCATCTCCG 60.109 55.000 0.00 0.00 43.13 4.63
4573 5030 1.201647 TCTCGACCAACGTTCATCTCC 59.798 52.381 0.00 0.00 43.13 3.71
4574 5031 2.251893 GTCTCGACCAACGTTCATCTC 58.748 52.381 0.00 0.00 43.13 2.75
4575 5032 1.401148 CGTCTCGACCAACGTTCATCT 60.401 52.381 0.00 0.00 43.13 2.90
4576 5033 0.982673 CGTCTCGACCAACGTTCATC 59.017 55.000 0.00 0.00 43.13 2.92
4577 5034 1.007336 GCGTCTCGACCAACGTTCAT 61.007 55.000 0.00 0.00 43.13 2.57
4578 5035 1.659335 GCGTCTCGACCAACGTTCA 60.659 57.895 0.00 0.00 43.13 3.18
4579 5036 2.704193 CGCGTCTCGACCAACGTTC 61.704 63.158 0.00 0.00 43.13 3.95
4580 5037 2.728383 CGCGTCTCGACCAACGTT 60.728 61.111 0.00 0.00 43.13 3.99
4581 5038 4.695231 CCGCGTCTCGACCAACGT 62.695 66.667 4.92 0.00 43.13 3.99
4583 5040 4.719369 AGCCGCGTCTCGACCAAC 62.719 66.667 4.92 0.00 41.67 3.77
4584 5041 3.909258 GAAGCCGCGTCTCGACCAA 62.909 63.158 4.92 0.00 41.67 3.67
4585 5042 4.415332 GAAGCCGCGTCTCGACCA 62.415 66.667 4.92 0.00 41.67 4.02
4597 5054 4.499037 AAACTTATCAACAACGGAAGCC 57.501 40.909 0.00 0.00 0.00 4.35
4598 5055 6.476243 TCTAAACTTATCAACAACGGAAGC 57.524 37.500 0.00 0.00 0.00 3.86
4599 5056 7.857569 TGTTCTAAACTTATCAACAACGGAAG 58.142 34.615 0.00 0.00 0.00 3.46
4600 5057 7.789273 TGTTCTAAACTTATCAACAACGGAA 57.211 32.000 0.00 0.00 0.00 4.30
4601 5058 7.972832 ATGTTCTAAACTTATCAACAACGGA 57.027 32.000 0.00 0.00 31.04 4.69
4602 5059 8.932791 AGTATGTTCTAAACTTATCAACAACGG 58.067 33.333 0.00 0.00 31.04 4.44
4603 5060 9.953825 GAGTATGTTCTAAACTTATCAACAACG 57.046 33.333 0.00 0.00 31.04 4.10
4613 5070 9.436957 CAACACATAGGAGTATGTTCTAAACTT 57.563 33.333 0.00 0.00 45.99 2.66
4614 5071 8.594550 ACAACACATAGGAGTATGTTCTAAACT 58.405 33.333 0.00 0.00 45.99 2.66
4615 5072 8.656849 CACAACACATAGGAGTATGTTCTAAAC 58.343 37.037 0.00 0.00 45.99 2.01
4616 5073 7.822334 CCACAACACATAGGAGTATGTTCTAAA 59.178 37.037 0.00 0.00 45.99 1.85
4617 5074 7.038587 ACCACAACACATAGGAGTATGTTCTAA 60.039 37.037 0.00 0.00 45.99 2.10
4618 5075 6.439375 ACCACAACACATAGGAGTATGTTCTA 59.561 38.462 0.00 0.00 45.99 2.10
4619 5076 5.248477 ACCACAACACATAGGAGTATGTTCT 59.752 40.000 0.00 0.00 45.99 3.01
4620 5077 5.488341 ACCACAACACATAGGAGTATGTTC 58.512 41.667 0.00 0.00 45.99 3.18
4621 5078 5.499004 ACCACAACACATAGGAGTATGTT 57.501 39.130 0.00 0.00 45.99 2.71
4623 5080 5.245531 ACAACCACAACACATAGGAGTATG 58.754 41.667 0.00 0.00 41.78 2.39
4624 5081 5.499004 ACAACCACAACACATAGGAGTAT 57.501 39.130 0.00 0.00 0.00 2.12
4625 5082 4.967084 ACAACCACAACACATAGGAGTA 57.033 40.909 0.00 0.00 0.00 2.59
4626 5083 3.857157 ACAACCACAACACATAGGAGT 57.143 42.857 0.00 0.00 0.00 3.85
4627 5084 5.705441 ACAATACAACCACAACACATAGGAG 59.295 40.000 0.00 0.00 0.00 3.69
4628 5085 5.471797 CACAATACAACCACAACACATAGGA 59.528 40.000 0.00 0.00 0.00 2.94
4629 5086 5.240623 ACACAATACAACCACAACACATAGG 59.759 40.000 0.00 0.00 0.00 2.57
4630 5087 6.142139 CACACAATACAACCACAACACATAG 58.858 40.000 0.00 0.00 0.00 2.23
4631 5088 5.590663 ACACACAATACAACCACAACACATA 59.409 36.000 0.00 0.00 0.00 2.29
4632 5089 4.400884 ACACACAATACAACCACAACACAT 59.599 37.500 0.00 0.00 0.00 3.21
4633 5090 3.759086 ACACACAATACAACCACAACACA 59.241 39.130 0.00 0.00 0.00 3.72
4634 5091 4.364415 ACACACAATACAACCACAACAC 57.636 40.909 0.00 0.00 0.00 3.32
4635 5092 5.048013 TCAAACACACAATACAACCACAACA 60.048 36.000 0.00 0.00 0.00 3.33
4636 5093 5.403246 TCAAACACACAATACAACCACAAC 58.597 37.500 0.00 0.00 0.00 3.32
4637 5094 5.644977 TCAAACACACAATACAACCACAA 57.355 34.783 0.00 0.00 0.00 3.33
4638 5095 4.439426 GCTCAAACACACAATACAACCACA 60.439 41.667 0.00 0.00 0.00 4.17
4639 5096 4.041723 GCTCAAACACACAATACAACCAC 58.958 43.478 0.00 0.00 0.00 4.16
4640 5097 3.951037 AGCTCAAACACACAATACAACCA 59.049 39.130 0.00 0.00 0.00 3.67
4641 5098 4.568152 AGCTCAAACACACAATACAACC 57.432 40.909 0.00 0.00 0.00 3.77
4642 5099 5.577835 TCAAGCTCAAACACACAATACAAC 58.422 37.500 0.00 0.00 0.00 3.32
4643 5100 5.356751 ACTCAAGCTCAAACACACAATACAA 59.643 36.000 0.00 0.00 0.00 2.41
4644 5101 4.881273 ACTCAAGCTCAAACACACAATACA 59.119 37.500 0.00 0.00 0.00 2.29
4645 5102 5.424121 ACTCAAGCTCAAACACACAATAC 57.576 39.130 0.00 0.00 0.00 1.89
4646 5103 5.700832 CCTACTCAAGCTCAAACACACAATA 59.299 40.000 0.00 0.00 0.00 1.90
4647 5104 4.516698 CCTACTCAAGCTCAAACACACAAT 59.483 41.667 0.00 0.00 0.00 2.71
4648 5105 3.876914 CCTACTCAAGCTCAAACACACAA 59.123 43.478 0.00 0.00 0.00 3.33
4649 5106 3.133901 TCCTACTCAAGCTCAAACACACA 59.866 43.478 0.00 0.00 0.00 3.72
4650 5107 3.728845 TCCTACTCAAGCTCAAACACAC 58.271 45.455 0.00 0.00 0.00 3.82
4651 5108 4.623932 ATCCTACTCAAGCTCAAACACA 57.376 40.909 0.00 0.00 0.00 3.72
4652 5109 5.693814 CAAATCCTACTCAAGCTCAAACAC 58.306 41.667 0.00 0.00 0.00 3.32
4653 5110 4.216257 GCAAATCCTACTCAAGCTCAAACA 59.784 41.667 0.00 0.00 0.00 2.83
4654 5111 4.670221 CGCAAATCCTACTCAAGCTCAAAC 60.670 45.833 0.00 0.00 0.00 2.93
4655 5112 3.436704 CGCAAATCCTACTCAAGCTCAAA 59.563 43.478 0.00 0.00 0.00 2.69
4656 5113 3.002791 CGCAAATCCTACTCAAGCTCAA 58.997 45.455 0.00 0.00 0.00 3.02
4657 5114 2.621338 CGCAAATCCTACTCAAGCTCA 58.379 47.619 0.00 0.00 0.00 4.26
4658 5115 1.328986 GCGCAAATCCTACTCAAGCTC 59.671 52.381 0.30 0.00 0.00 4.09
4659 5116 1.373570 GCGCAAATCCTACTCAAGCT 58.626 50.000 0.30 0.00 0.00 3.74
4660 5117 0.378610 GGCGCAAATCCTACTCAAGC 59.621 55.000 10.83 0.00 0.00 4.01
4661 5118 1.936547 GAGGCGCAAATCCTACTCAAG 59.063 52.381 10.83 0.00 33.24 3.02
4662 5119 1.277842 TGAGGCGCAAATCCTACTCAA 59.722 47.619 10.83 0.00 33.24 3.02
4663 5120 0.901827 TGAGGCGCAAATCCTACTCA 59.098 50.000 10.83 7.22 33.24 3.41
4664 5121 1.291132 GTGAGGCGCAAATCCTACTC 58.709 55.000 10.83 4.24 33.24 2.59
4665 5122 0.613260 TGTGAGGCGCAAATCCTACT 59.387 50.000 10.83 0.00 33.24 2.57
4666 5123 1.009829 CTGTGAGGCGCAAATCCTAC 58.990 55.000 10.83 0.00 33.24 3.18
4667 5124 0.107703 CCTGTGAGGCGCAAATCCTA 60.108 55.000 10.83 0.00 33.24 2.94
4668 5125 1.377725 CCTGTGAGGCGCAAATCCT 60.378 57.895 10.83 0.00 36.46 3.24
4669 5126 2.409870 CCCTGTGAGGCGCAAATCC 61.410 63.158 10.83 0.00 32.73 3.01
4670 5127 1.244019 AACCCTGTGAGGCGCAAATC 61.244 55.000 10.83 4.44 32.73 2.17
4671 5128 1.228552 AACCCTGTGAGGCGCAAAT 60.229 52.632 10.83 0.00 32.73 2.32
4672 5129 2.192861 CAACCCTGTGAGGCGCAAA 61.193 57.895 10.83 0.00 32.73 3.68
4673 5130 2.594303 CAACCCTGTGAGGCGCAA 60.594 61.111 10.83 0.00 32.73 4.85
4674 5131 3.825160 GACAACCCTGTGAGGCGCA 62.825 63.158 10.83 0.00 35.30 6.09
4675 5132 3.050275 GACAACCCTGTGAGGCGC 61.050 66.667 0.00 0.00 35.30 6.53
4676 5133 0.606401 AATGACAACCCTGTGAGGCG 60.606 55.000 0.00 0.00 35.30 5.52
4677 5134 1.620822 AAATGACAACCCTGTGAGGC 58.379 50.000 0.00 0.00 35.30 4.70
4697 5154 3.192633 GGCGAGCCCTTCTTTGATAAAAA 59.807 43.478 1.97 0.00 0.00 1.94
4698 5155 2.752903 GGCGAGCCCTTCTTTGATAAAA 59.247 45.455 1.97 0.00 0.00 1.52
4699 5156 2.365582 GGCGAGCCCTTCTTTGATAAA 58.634 47.619 1.97 0.00 0.00 1.40
4700 5157 2.038387 GGCGAGCCCTTCTTTGATAA 57.962 50.000 1.97 0.00 0.00 1.75
4701 5158 3.780624 GGCGAGCCCTTCTTTGATA 57.219 52.632 1.97 0.00 0.00 2.15
4702 5159 4.645809 GGCGAGCCCTTCTTTGAT 57.354 55.556 1.97 0.00 0.00 2.57
4712 5169 3.699134 AAATCGGAAGGGGCGAGCC 62.699 63.158 5.37 5.37 0.00 4.70
4713 5170 1.715862 GAAAATCGGAAGGGGCGAGC 61.716 60.000 0.00 0.00 0.00 5.03
4714 5171 0.392461 TGAAAATCGGAAGGGGCGAG 60.392 55.000 0.00 0.00 0.00 5.03
4715 5172 0.254747 ATGAAAATCGGAAGGGGCGA 59.745 50.000 0.00 0.00 0.00 5.54
4716 5173 1.102978 AATGAAAATCGGAAGGGGCG 58.897 50.000 0.00 0.00 0.00 6.13
4717 5174 3.066760 CAGTAATGAAAATCGGAAGGGGC 59.933 47.826 0.00 0.00 0.00 5.80
4718 5175 4.523083 TCAGTAATGAAAATCGGAAGGGG 58.477 43.478 0.00 0.00 0.00 4.79
4719 5176 6.509418 TTTCAGTAATGAAAATCGGAAGGG 57.491 37.500 15.48 0.00 35.17 3.95
4720 5177 6.806739 GGTTTTCAGTAATGAAAATCGGAAGG 59.193 38.462 27.81 0.00 45.67 3.46
4721 5178 7.367285 TGGTTTTCAGTAATGAAAATCGGAAG 58.633 34.615 27.81 0.00 46.34 3.46
4722 5179 7.278461 TGGTTTTCAGTAATGAAAATCGGAA 57.722 32.000 27.81 13.33 46.34 4.30
4723 5180 6.885952 TGGTTTTCAGTAATGAAAATCGGA 57.114 33.333 27.81 13.94 46.34 4.55
4724 5181 6.364976 GGTTGGTTTTCAGTAATGAAAATCGG 59.635 38.462 27.81 0.00 46.34 4.18
4725 5182 7.145323 AGGTTGGTTTTCAGTAATGAAAATCG 58.855 34.615 27.81 0.00 46.34 3.34
4726 5183 8.887036 AAGGTTGGTTTTCAGTAATGAAAATC 57.113 30.769 27.81 27.28 45.67 2.17
4727 5184 9.758651 GTAAGGTTGGTTTTCAGTAATGAAAAT 57.241 29.630 27.81 15.79 45.67 1.82
4728 5185 8.750298 TGTAAGGTTGGTTTTCAGTAATGAAAA 58.250 29.630 23.18 23.18 43.10 2.29
4729 5186 8.294954 TGTAAGGTTGGTTTTCAGTAATGAAA 57.705 30.769 13.98 13.98 36.17 2.69
4730 5187 7.776030 TCTGTAAGGTTGGTTTTCAGTAATGAA 59.224 33.333 0.56 0.56 0.00 2.57
4731 5188 7.284074 TCTGTAAGGTTGGTTTTCAGTAATGA 58.716 34.615 0.00 0.00 0.00 2.57
4732 5189 7.504924 TCTGTAAGGTTGGTTTTCAGTAATG 57.495 36.000 0.00 0.00 0.00 1.90
4733 5190 8.706322 ATTCTGTAAGGTTGGTTTTCAGTAAT 57.294 30.769 0.00 0.00 0.00 1.89
4734 5191 8.528044 AATTCTGTAAGGTTGGTTTTCAGTAA 57.472 30.769 0.00 0.00 0.00 2.24
4735 5192 7.776030 TGAATTCTGTAAGGTTGGTTTTCAGTA 59.224 33.333 7.05 0.00 0.00 2.74
4736 5193 6.605594 TGAATTCTGTAAGGTTGGTTTTCAGT 59.394 34.615 7.05 0.00 0.00 3.41
4737 5194 7.013274 TCTGAATTCTGTAAGGTTGGTTTTCAG 59.987 37.037 7.05 0.00 38.30 3.02
4738 5195 6.831353 TCTGAATTCTGTAAGGTTGGTTTTCA 59.169 34.615 7.05 0.00 0.00 2.69
4739 5196 7.272037 TCTGAATTCTGTAAGGTTGGTTTTC 57.728 36.000 7.05 0.00 0.00 2.29
4740 5197 7.559897 TCTTCTGAATTCTGTAAGGTTGGTTTT 59.440 33.333 7.05 0.00 0.00 2.43
4741 5198 7.013369 GTCTTCTGAATTCTGTAAGGTTGGTTT 59.987 37.037 7.05 0.00 0.00 3.27
4742 5199 6.486993 GTCTTCTGAATTCTGTAAGGTTGGTT 59.513 38.462 7.05 0.00 0.00 3.67
4743 5200 5.998363 GTCTTCTGAATTCTGTAAGGTTGGT 59.002 40.000 7.05 0.00 0.00 3.67
4744 5201 5.997746 TGTCTTCTGAATTCTGTAAGGTTGG 59.002 40.000 7.05 0.00 0.00 3.77
4745 5202 6.931281 TCTGTCTTCTGAATTCTGTAAGGTTG 59.069 38.462 7.05 6.28 0.00 3.77
4746 5203 6.931840 GTCTGTCTTCTGAATTCTGTAAGGTT 59.068 38.462 7.05 0.00 0.00 3.50
4747 5204 6.042093 TGTCTGTCTTCTGAATTCTGTAAGGT 59.958 38.462 7.05 0.00 0.00 3.50
4748 5205 6.459066 TGTCTGTCTTCTGAATTCTGTAAGG 58.541 40.000 7.05 0.00 0.00 2.69
4749 5206 7.151308 ACTGTCTGTCTTCTGAATTCTGTAAG 58.849 38.462 7.05 11.22 0.00 2.34
4750 5207 7.055667 ACTGTCTGTCTTCTGAATTCTGTAA 57.944 36.000 7.05 2.75 0.00 2.41
4751 5208 6.656632 ACTGTCTGTCTTCTGAATTCTGTA 57.343 37.500 7.05 0.00 0.00 2.74
4752 5209 5.543507 ACTGTCTGTCTTCTGAATTCTGT 57.456 39.130 7.05 0.00 0.00 3.41
4753 5210 5.866633 GGTACTGTCTGTCTTCTGAATTCTG 59.133 44.000 7.05 6.50 0.00 3.02
4754 5211 5.777732 AGGTACTGTCTGTCTTCTGAATTCT 59.222 40.000 7.05 0.00 37.18 2.40
4755 5212 6.031751 AGGTACTGTCTGTCTTCTGAATTC 57.968 41.667 0.00 0.00 37.18 2.17
4756 5213 7.015292 TGTTAGGTACTGTCTGTCTTCTGAATT 59.985 37.037 0.00 0.00 41.52 2.17
4757 5214 6.493802 TGTTAGGTACTGTCTGTCTTCTGAAT 59.506 38.462 0.00 0.00 41.52 2.57
4758 5215 5.831525 TGTTAGGTACTGTCTGTCTTCTGAA 59.168 40.000 0.00 0.00 41.52 3.02
4759 5216 5.382616 TGTTAGGTACTGTCTGTCTTCTGA 58.617 41.667 0.00 0.00 41.52 3.27
4760 5217 5.707242 TGTTAGGTACTGTCTGTCTTCTG 57.293 43.478 0.00 0.00 41.52 3.02
4761 5218 5.775701 ACATGTTAGGTACTGTCTGTCTTCT 59.224 40.000 0.00 0.00 41.52 2.85
4762 5219 6.026947 ACATGTTAGGTACTGTCTGTCTTC 57.973 41.667 0.00 0.00 41.52 2.87
4763 5220 5.047235 GGACATGTTAGGTACTGTCTGTCTT 60.047 44.000 0.00 0.00 41.52 3.01
4764 5221 4.463186 GGACATGTTAGGTACTGTCTGTCT 59.537 45.833 0.00 0.00 41.52 3.41
4765 5222 4.463186 AGGACATGTTAGGTACTGTCTGTC 59.537 45.833 0.00 7.57 41.52 3.51
4766 5223 4.417437 AGGACATGTTAGGTACTGTCTGT 58.583 43.478 0.00 0.00 41.52 3.41
4767 5224 4.142138 GGAGGACATGTTAGGTACTGTCTG 60.142 50.000 0.00 0.00 41.52 3.51
4768 5225 4.024670 GGAGGACATGTTAGGTACTGTCT 58.975 47.826 0.00 0.00 41.52 3.41
4769 5226 4.024670 AGGAGGACATGTTAGGTACTGTC 58.975 47.826 0.00 2.84 41.52 3.51
4770 5227 4.024670 GAGGAGGACATGTTAGGTACTGT 58.975 47.826 0.00 0.00 41.52 3.55
4771 5228 4.023980 TGAGGAGGACATGTTAGGTACTG 58.976 47.826 0.00 0.00 41.52 2.74
4772 5229 4.024670 GTGAGGAGGACATGTTAGGTACT 58.975 47.826 0.00 0.00 46.37 2.73
4773 5230 3.767673 TGTGAGGAGGACATGTTAGGTAC 59.232 47.826 0.00 0.00 0.00 3.34
4774 5231 4.023980 CTGTGAGGAGGACATGTTAGGTA 58.976 47.826 0.00 0.00 0.00 3.08
4775 5232 2.834549 CTGTGAGGAGGACATGTTAGGT 59.165 50.000 0.00 0.00 0.00 3.08
4776 5233 2.169352 CCTGTGAGGAGGACATGTTAGG 59.831 54.545 0.00 0.00 37.67 2.69
4777 5234 2.169352 CCCTGTGAGGAGGACATGTTAG 59.831 54.545 0.00 0.00 37.67 2.34
4778 5235 2.187958 CCCTGTGAGGAGGACATGTTA 58.812 52.381 0.00 0.00 37.67 2.41
4779 5236 0.987294 CCCTGTGAGGAGGACATGTT 59.013 55.000 0.00 0.00 37.67 2.71
4780 5237 0.178891 ACCCTGTGAGGAGGACATGT 60.179 55.000 0.00 0.00 37.67 3.21
4781 5238 0.987294 AACCCTGTGAGGAGGACATG 59.013 55.000 0.00 0.00 37.67 3.21
4782 5239 0.987294 CAACCCTGTGAGGAGGACAT 59.013 55.000 0.00 0.00 37.67 3.06
4783 5240 0.399949 ACAACCCTGTGAGGAGGACA 60.400 55.000 0.00 0.00 37.67 4.02
4784 5241 0.321996 GACAACCCTGTGAGGAGGAC 59.678 60.000 0.00 0.00 37.67 3.85
4785 5242 1.185618 CGACAACCCTGTGAGGAGGA 61.186 60.000 0.00 0.00 37.67 3.71
4786 5243 1.293498 CGACAACCCTGTGAGGAGG 59.707 63.158 0.00 0.00 37.67 4.30
4787 5244 0.319900 CACGACAACCCTGTGAGGAG 60.320 60.000 0.00 0.00 37.67 3.69
4788 5245 1.745890 CACGACAACCCTGTGAGGA 59.254 57.895 0.00 0.00 37.67 3.71
4789 5246 1.301716 CCACGACAACCCTGTGAGG 60.302 63.158 0.00 0.00 35.30 3.86
4790 5247 1.301716 CCCACGACAACCCTGTGAG 60.302 63.158 0.00 0.00 35.30 3.51
4791 5248 1.754380 CTCCCACGACAACCCTGTGA 61.754 60.000 0.00 0.00 35.30 3.58
4792 5249 1.301716 CTCCCACGACAACCCTGTG 60.302 63.158 0.00 0.00 35.30 3.66
4793 5250 3.148084 CTCCCACGACAACCCTGT 58.852 61.111 0.00 0.00 38.98 4.00
4794 5251 2.358737 GCTCCCACGACAACCCTG 60.359 66.667 0.00 0.00 0.00 4.45
4795 5252 2.147387 AAGCTCCCACGACAACCCT 61.147 57.895 0.00 0.00 0.00 4.34
4796 5253 1.966451 CAAGCTCCCACGACAACCC 60.966 63.158 0.00 0.00 0.00 4.11
4797 5254 1.227853 ACAAGCTCCCACGACAACC 60.228 57.895 0.00 0.00 0.00 3.77
4798 5255 0.249911 AGACAAGCTCCCACGACAAC 60.250 55.000 0.00 0.00 0.00 3.32
4799 5256 0.249868 CAGACAAGCTCCCACGACAA 60.250 55.000 0.00 0.00 0.00 3.18
4800 5257 1.367471 CAGACAAGCTCCCACGACA 59.633 57.895 0.00 0.00 0.00 4.35
4801 5258 0.249911 AACAGACAAGCTCCCACGAC 60.250 55.000 0.00 0.00 0.00 4.34
4802 5259 0.468226 AAACAGACAAGCTCCCACGA 59.532 50.000 0.00 0.00 0.00 4.35
4803 5260 1.308998 AAAACAGACAAGCTCCCACG 58.691 50.000 0.00 0.00 0.00 4.94
4804 5261 2.952310 AGAAAAACAGACAAGCTCCCAC 59.048 45.455 0.00 0.00 0.00 4.61
4805 5262 3.297134 AGAAAAACAGACAAGCTCCCA 57.703 42.857 0.00 0.00 0.00 4.37
4806 5263 3.381590 ACAAGAAAAACAGACAAGCTCCC 59.618 43.478 0.00 0.00 0.00 4.30
4807 5264 4.639135 ACAAGAAAAACAGACAAGCTCC 57.361 40.909 0.00 0.00 0.00 4.70
4808 5265 5.037385 GGAACAAGAAAAACAGACAAGCTC 58.963 41.667 0.00 0.00 0.00 4.09
4809 5266 4.706962 AGGAACAAGAAAAACAGACAAGCT 59.293 37.500 0.00 0.00 0.00 3.74
4810 5267 4.998788 AGGAACAAGAAAAACAGACAAGC 58.001 39.130 0.00 0.00 0.00 4.01
4811 5268 6.442513 AGAGGAACAAGAAAAACAGACAAG 57.557 37.500 0.00 0.00 0.00 3.16
4812 5269 6.317893 GGTAGAGGAACAAGAAAAACAGACAA 59.682 38.462 0.00 0.00 0.00 3.18
4813 5270 5.820947 GGTAGAGGAACAAGAAAAACAGACA 59.179 40.000 0.00 0.00 0.00 3.41
4814 5271 6.056236 AGGTAGAGGAACAAGAAAAACAGAC 58.944 40.000 0.00 0.00 0.00 3.51
4815 5272 6.248569 AGGTAGAGGAACAAGAAAAACAGA 57.751 37.500 0.00 0.00 0.00 3.41
4816 5273 6.768381 AGAAGGTAGAGGAACAAGAAAAACAG 59.232 38.462 0.00 0.00 0.00 3.16
4817 5274 6.659824 AGAAGGTAGAGGAACAAGAAAAACA 58.340 36.000 0.00 0.00 0.00 2.83
4818 5275 8.722394 CATAGAAGGTAGAGGAACAAGAAAAAC 58.278 37.037 0.00 0.00 0.00 2.43
4819 5276 8.656806 TCATAGAAGGTAGAGGAACAAGAAAAA 58.343 33.333 0.00 0.00 0.00 1.94
4820 5277 8.202461 TCATAGAAGGTAGAGGAACAAGAAAA 57.798 34.615 0.00 0.00 0.00 2.29
4821 5278 7.792364 TCATAGAAGGTAGAGGAACAAGAAA 57.208 36.000 0.00 0.00 0.00 2.52
4822 5279 7.579723 GCTTCATAGAAGGTAGAGGAACAAGAA 60.580 40.741 8.66 0.00 0.00 2.52
4823 5280 6.127310 GCTTCATAGAAGGTAGAGGAACAAGA 60.127 42.308 8.66 0.00 0.00 3.02
4824 5281 6.045955 GCTTCATAGAAGGTAGAGGAACAAG 58.954 44.000 8.66 0.00 0.00 3.16
4825 5282 5.721960 AGCTTCATAGAAGGTAGAGGAACAA 59.278 40.000 9.47 0.00 0.00 2.83
4826 5283 5.273208 AGCTTCATAGAAGGTAGAGGAACA 58.727 41.667 9.47 0.00 0.00 3.18
4827 5284 5.862678 AGCTTCATAGAAGGTAGAGGAAC 57.137 43.478 9.47 0.00 0.00 3.62
4828 5285 6.551601 CCTTAGCTTCATAGAAGGTAGAGGAA 59.448 42.308 23.97 12.31 34.37 3.36
4829 5286 6.071984 CCTTAGCTTCATAGAAGGTAGAGGA 58.928 44.000 23.97 11.42 34.37 3.71
4830 5287 5.279256 GCCTTAGCTTCATAGAAGGTAGAGG 60.279 48.000 23.97 23.97 40.57 3.69
4831 5288 5.303078 TGCCTTAGCTTCATAGAAGGTAGAG 59.697 44.000 15.52 14.80 40.57 2.43
4832 5289 5.069251 GTGCCTTAGCTTCATAGAAGGTAGA 59.931 44.000 15.52 8.67 40.57 2.59
4833 5290 5.163405 TGTGCCTTAGCTTCATAGAAGGTAG 60.163 44.000 15.52 8.89 40.57 3.18
4834 5291 4.714802 TGTGCCTTAGCTTCATAGAAGGTA 59.285 41.667 12.99 12.99 40.57 3.08
4835 5292 3.519510 TGTGCCTTAGCTTCATAGAAGGT 59.480 43.478 14.79 14.79 40.57 3.50
4836 5293 3.873952 GTGTGCCTTAGCTTCATAGAAGG 59.126 47.826 6.36 6.36 41.26 3.46
4837 5294 4.507710 TGTGTGCCTTAGCTTCATAGAAG 58.492 43.478 0.00 2.48 40.80 2.85
4838 5295 4.020218 ACTGTGTGCCTTAGCTTCATAGAA 60.020 41.667 0.00 0.00 40.80 2.10
4839 5296 3.515502 ACTGTGTGCCTTAGCTTCATAGA 59.484 43.478 0.00 0.00 40.80 1.98
4840 5297 3.866651 ACTGTGTGCCTTAGCTTCATAG 58.133 45.455 0.00 0.00 40.80 2.23
4841 5298 3.515502 AGACTGTGTGCCTTAGCTTCATA 59.484 43.478 0.00 0.00 40.80 2.15
4842 5299 2.304180 AGACTGTGTGCCTTAGCTTCAT 59.696 45.455 0.00 0.00 40.80 2.57
4843 5300 1.694150 AGACTGTGTGCCTTAGCTTCA 59.306 47.619 0.00 0.00 40.80 3.02
4844 5301 2.072298 CAGACTGTGTGCCTTAGCTTC 58.928 52.381 0.00 0.00 40.80 3.86
4845 5302 1.879796 GCAGACTGTGTGCCTTAGCTT 60.880 52.381 18.22 0.00 40.80 3.74
4846 5303 0.321122 GCAGACTGTGTGCCTTAGCT 60.321 55.000 18.22 0.00 40.80 3.32
4847 5304 1.630244 CGCAGACTGTGTGCCTTAGC 61.630 60.000 22.18 0.00 37.67 3.09
4848 5305 0.319900 ACGCAGACTGTGTGCCTTAG 60.320 55.000 20.56 11.76 39.97 2.18
4849 5306 1.745890 ACGCAGACTGTGTGCCTTA 59.254 52.632 20.56 0.00 39.97 2.69
4850 5307 2.505982 ACGCAGACTGTGTGCCTT 59.494 55.556 20.56 8.42 39.97 4.35
4855 5312 1.364171 GAGACCACGCAGACTGTGT 59.636 57.895 15.92 15.92 42.58 3.72
4856 5313 1.730902 CGAGACCACGCAGACTGTG 60.731 63.158 14.48 14.48 37.09 3.66
4857 5314 2.645567 CGAGACCACGCAGACTGT 59.354 61.111 3.99 0.00 0.00 3.55
4858 5315 2.126307 CCGAGACCACGCAGACTG 60.126 66.667 0.00 0.00 0.00 3.51
4859 5316 1.461091 TTTCCGAGACCACGCAGACT 61.461 55.000 0.00 0.00 0.00 3.24
4860 5317 0.599204 TTTTCCGAGACCACGCAGAC 60.599 55.000 0.00 0.00 0.00 3.51
4861 5318 0.105224 TTTTTCCGAGACCACGCAGA 59.895 50.000 0.00 0.00 0.00 4.26
4862 5319 2.612200 TTTTTCCGAGACCACGCAG 58.388 52.632 0.00 0.00 0.00 5.18
4863 5320 4.859400 TTTTTCCGAGACCACGCA 57.141 50.000 0.00 0.00 0.00 5.24
4877 5334 2.303311 AGAAGAGAGGCCGCTAGTTTTT 59.697 45.455 9.78 0.00 0.00 1.94
4878 5335 1.903183 AGAAGAGAGGCCGCTAGTTTT 59.097 47.619 9.78 1.65 0.00 2.43
4879 5336 1.478916 GAGAAGAGAGGCCGCTAGTTT 59.521 52.381 9.78 4.42 0.00 2.66
4880 5337 1.107945 GAGAAGAGAGGCCGCTAGTT 58.892 55.000 9.78 6.09 0.00 2.24
4881 5338 0.033991 TGAGAAGAGAGGCCGCTAGT 60.034 55.000 9.78 0.00 0.00 2.57
4882 5339 0.383949 GTGAGAAGAGAGGCCGCTAG 59.616 60.000 9.78 0.00 0.00 3.42
4883 5340 0.323451 TGTGAGAAGAGAGGCCGCTA 60.323 55.000 9.78 0.00 0.00 4.26
4884 5341 1.603236 CTGTGAGAAGAGAGGCCGCT 61.603 60.000 9.51 9.51 0.00 5.52
4885 5342 1.153667 CTGTGAGAAGAGAGGCCGC 60.154 63.158 0.00 0.00 0.00 6.53
4886 5343 1.403679 CTACTGTGAGAAGAGAGGCCG 59.596 57.143 0.00 0.00 0.00 6.13
4887 5344 2.165437 CACTACTGTGAGAAGAGAGGCC 59.835 54.545 0.00 0.00 46.55 5.19
4888 5345 3.502191 CACTACTGTGAGAAGAGAGGC 57.498 52.381 0.00 0.00 46.55 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.