Multiple sequence alignment - TraesCS6B01G303800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G303800 chr6B 100.000 4525 0 0 1 4525 544401950 544406474 0.000000e+00 8357.0
1 TraesCS6B01G303800 chr6B 90.625 64 6 0 1 64 366175066 366175129 8.070000e-13 86.1
2 TraesCS6B01G303800 chr6D 91.400 2128 109 43 2271 4354 362988267 362990364 0.000000e+00 2848.0
3 TraesCS6B01G303800 chr6D 89.649 1565 93 39 456 1967 362986722 362988270 0.000000e+00 1929.0
4 TraesCS6B01G303800 chr6D 92.973 185 7 3 4341 4524 362990387 362990566 9.650000e-67 265.0
5 TraesCS6B01G303800 chr6A 92.793 1457 67 19 2271 3708 503426489 503427926 0.000000e+00 2074.0
6 TraesCS6B01G303800 chr6A 91.160 1448 71 26 456 1872 503425013 503426434 0.000000e+00 1912.0
7 TraesCS6B01G303800 chr6A 88.471 798 43 16 3740 4525 503427929 503428689 0.000000e+00 918.0
8 TraesCS6B01G303800 chr1B 97.735 309 7 0 1964 2272 115956183 115956491 2.400000e-147 532.0
9 TraesCS6B01G303800 chr1B 92.157 306 22 2 1967 2271 646461141 646461445 8.990000e-117 431.0
10 TraesCS6B01G303800 chr1B 95.833 168 7 0 1 168 592587651 592587818 5.770000e-69 272.0
11 TraesCS6B01G303800 chr1B 75.824 182 41 2 2684 2865 569561872 569561694 6.230000e-14 89.8
12 TraesCS6B01G303800 chr7A 78.318 761 124 36 2633 3371 200032002 200031261 1.920000e-123 453.0
13 TraesCS6B01G303800 chr7A 91.111 225 18 2 1639 1862 200032714 200032491 2.050000e-78 303.0
14 TraesCS6B01G303800 chr7A 88.636 220 23 2 1639 1857 200064996 200064778 2.680000e-67 267.0
15 TraesCS6B01G303800 chr7D 78.187 761 119 36 2633 3371 191492648 191491913 4.150000e-120 442.0
16 TraesCS6B01G303800 chr7D 90.308 227 20 2 1639 1864 191493347 191493122 3.420000e-76 296.0
17 TraesCS6B01G303800 chr7D 87.783 221 23 4 1639 1857 191557849 191557631 5.810000e-64 255.0
18 TraesCS6B01G303800 chr2A 91.693 313 26 0 1960 2272 636590721 636591033 6.950000e-118 435.0
19 TraesCS6B01G303800 chr2A 79.137 139 29 0 2672 2810 203904254 203904116 3.730000e-16 97.1
20 TraesCS6B01G303800 chr5D 91.830 306 25 0 1967 2272 478443269 478442964 1.160000e-115 427.0
21 TraesCS6B01G303800 chr5A 90.938 320 26 3 1960 2277 197206754 197207072 1.160000e-115 427.0
22 TraesCS6B01G303800 chr3A 91.830 306 25 0 1967 2272 29033679 29033374 1.160000e-115 427.0
23 TraesCS6B01G303800 chr1A 91.111 315 26 2 1963 2277 279824786 279824474 4.180000e-115 425.0
24 TraesCS6B01G303800 chr1A 90.968 310 27 1 1962 2271 544197018 544196710 2.520000e-112 416.0
25 TraesCS6B01G303800 chr4A 90.823 316 28 1 1956 2271 96276345 96276659 5.410000e-114 422.0
26 TraesCS6B01G303800 chr4A 82.178 101 13 5 2948 3046 460239337 460239240 1.040000e-11 82.4
27 TraesCS6B01G303800 chr7B 89.954 219 22 0 1639 1857 336647530 336647312 2.660000e-72 283.0
28 TraesCS6B01G303800 chr7B 87.387 222 24 4 1639 1858 336718601 336718382 7.510000e-63 252.0
29 TraesCS6B01G303800 chr7B 86.266 233 27 4 2633 2864 336646831 336646603 9.720000e-62 248.0
30 TraesCS6B01G303800 chr7B 91.228 57 4 1 175 230 15772705 15772649 4.850000e-10 76.8
31 TraesCS6B01G303800 chr2B 87.349 166 19 2 1 165 748357719 748357555 5.980000e-44 189.0
32 TraesCS6B01G303800 chr2B 79.137 139 29 0 2672 2810 797260435 797260297 3.730000e-16 97.1
33 TraesCS6B01G303800 chr5B 80.892 157 30 0 1697 1853 532933233 532933077 1.710000e-24 124.0
34 TraesCS6B01G303800 chrUn 79.137 139 29 0 2672 2810 302674589 302674727 3.730000e-16 97.1
35 TraesCS6B01G303800 chr2D 95.161 62 2 1 170 230 348972067 348972128 3.730000e-16 97.1
36 TraesCS6B01G303800 chr4D 81.188 101 14 5 2948 3046 116271047 116271144 4.850000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G303800 chr6B 544401950 544406474 4524 False 8357.000000 8357 100.000000 1 4525 1 chr6B.!!$F2 4524
1 TraesCS6B01G303800 chr6D 362986722 362990566 3844 False 1680.666667 2848 91.340667 456 4524 3 chr6D.!!$F1 4068
2 TraesCS6B01G303800 chr6A 503425013 503428689 3676 False 1634.666667 2074 90.808000 456 4525 3 chr6A.!!$F1 4069
3 TraesCS6B01G303800 chr7A 200031261 200032714 1453 True 378.000000 453 84.714500 1639 3371 2 chr7A.!!$R2 1732
4 TraesCS6B01G303800 chr7D 191491913 191493347 1434 True 369.000000 442 84.247500 1639 3371 2 chr7D.!!$R2 1732
5 TraesCS6B01G303800 chr7B 336646603 336647530 927 True 265.500000 283 88.110000 1639 2864 2 chr7B.!!$R3 1225

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
134 135 0.031314 CTGGATGTCGGATGAGGTCG 59.969 60.0 0.00 0.0 0.0 4.79 F
139 140 0.038618 TGTCGGATGAGGTCGTGTTG 60.039 55.0 0.00 0.0 0.0 3.33 F
447 448 0.105039 ACTCGAATTCCTGGATCCGC 59.895 55.0 7.39 0.0 0.0 5.54 F
2131 2195 0.038166 TTCCAGCATCCACTCCAACC 59.962 55.0 0.00 0.0 0.0 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2112 2176 0.038166 GGTTGGAGTGGATGCTGGAA 59.962 55.0 0.00 0.00 0.00 3.53 R
2114 2178 0.393537 GAGGTTGGAGTGGATGCTGG 60.394 60.0 0.00 0.00 0.00 4.85 R
2259 2328 0.035056 CCACACCTAGGGCCTCTTTG 60.035 60.0 10.74 8.08 0.00 2.77 R
3733 4075 0.034896 AGATATTTACAGGGCGCCCG 59.965 55.0 38.88 32.87 41.95 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 3.827898 CCCGACGAGGCCTGAGTC 61.828 72.222 21.96 21.96 39.21 3.36
29 30 2.752238 CCGACGAGGCCTGAGTCT 60.752 66.667 26.29 0.00 33.10 3.24
30 31 2.344203 CCGACGAGGCCTGAGTCTT 61.344 63.158 26.29 2.81 33.10 3.01
31 32 1.137825 CGACGAGGCCTGAGTCTTC 59.862 63.158 26.29 10.27 33.10 2.87
32 33 1.309499 CGACGAGGCCTGAGTCTTCT 61.309 60.000 26.29 1.52 33.10 2.85
33 34 0.172352 GACGAGGCCTGAGTCTTCTG 59.828 60.000 23.67 4.19 32.58 3.02
34 35 1.153667 CGAGGCCTGAGTCTTCTGC 60.154 63.158 12.00 0.00 0.00 4.26
35 36 1.881903 CGAGGCCTGAGTCTTCTGCA 61.882 60.000 12.00 0.00 0.00 4.41
36 37 0.390998 GAGGCCTGAGTCTTCTGCAC 60.391 60.000 12.00 0.00 0.00 4.57
37 38 1.376553 GGCCTGAGTCTTCTGCACC 60.377 63.158 0.00 0.00 0.00 5.01
38 39 1.376553 GCCTGAGTCTTCTGCACCC 60.377 63.158 0.00 0.00 0.00 4.61
39 40 2.061220 CCTGAGTCTTCTGCACCCA 58.939 57.895 0.00 0.00 0.00 4.51
40 41 0.036577 CCTGAGTCTTCTGCACCCAG 60.037 60.000 0.00 0.00 40.54 4.45
41 42 0.972134 CTGAGTCTTCTGCACCCAGA 59.028 55.000 0.00 0.00 46.03 3.86
47 48 4.954118 TCTGCACCCAGACCCCGT 62.954 66.667 0.00 0.00 42.98 5.28
48 49 4.394712 CTGCACCCAGACCCCGTC 62.395 72.222 0.00 0.00 41.77 4.79
51 52 4.065281 CACCCAGACCCCGTCGTC 62.065 72.222 0.00 0.00 37.67 4.20
54 55 3.760035 CCAGACCCCGTCGTCCTG 61.760 72.222 0.00 0.00 37.67 3.86
55 56 3.760035 CAGACCCCGTCGTCCTGG 61.760 72.222 0.00 0.00 37.67 4.45
56 57 3.975591 AGACCCCGTCGTCCTGGA 61.976 66.667 0.00 0.00 37.67 3.86
57 58 2.758737 GACCCCGTCGTCCTGGAT 60.759 66.667 0.00 0.00 0.00 3.41
58 59 2.758737 ACCCCGTCGTCCTGGATC 60.759 66.667 0.00 0.00 0.00 3.36
59 60 2.442272 CCCCGTCGTCCTGGATCT 60.442 66.667 0.00 0.00 0.00 2.75
60 61 2.491022 CCCCGTCGTCCTGGATCTC 61.491 68.421 0.00 0.00 0.00 2.75
61 62 2.716244 CCGTCGTCCTGGATCTCG 59.284 66.667 0.00 5.12 0.00 4.04
62 63 2.024871 CGTCGTCCTGGATCTCGC 59.975 66.667 0.00 0.00 0.00 5.03
63 64 2.024871 GTCGTCCTGGATCTCGCG 59.975 66.667 0.00 0.00 0.00 5.87
64 65 3.209812 TCGTCCTGGATCTCGCGG 61.210 66.667 6.13 0.00 0.00 6.46
65 66 3.518998 CGTCCTGGATCTCGCGGT 61.519 66.667 6.13 0.00 0.00 5.68
66 67 2.105128 GTCCTGGATCTCGCGGTG 59.895 66.667 6.13 0.00 0.00 4.94
67 68 3.147595 TCCTGGATCTCGCGGTGG 61.148 66.667 6.13 0.00 0.00 4.61
68 69 3.461773 CCTGGATCTCGCGGTGGT 61.462 66.667 6.13 0.00 0.00 4.16
69 70 2.579201 CTGGATCTCGCGGTGGTT 59.421 61.111 6.13 0.00 0.00 3.67
70 71 1.811266 CTGGATCTCGCGGTGGTTG 60.811 63.158 6.13 0.00 0.00 3.77
71 72 2.511600 GGATCTCGCGGTGGTTGG 60.512 66.667 6.13 0.00 0.00 3.77
72 73 3.195698 GATCTCGCGGTGGTTGGC 61.196 66.667 6.13 0.00 0.00 4.52
73 74 4.778143 ATCTCGCGGTGGTTGGCC 62.778 66.667 6.13 0.00 0.00 5.36
98 99 4.379243 CCTTGTCCCAGCGCGAGT 62.379 66.667 12.10 0.00 0.00 4.18
99 100 2.811317 CTTGTCCCAGCGCGAGTC 60.811 66.667 12.10 0.00 0.00 3.36
100 101 4.717629 TTGTCCCAGCGCGAGTCG 62.718 66.667 12.10 8.54 42.12 4.18
120 121 4.414956 TCCCGACCCCTGCTGGAT 62.415 66.667 11.88 0.00 35.39 3.41
121 122 4.181010 CCCGACCCCTGCTGGATG 62.181 72.222 11.88 4.43 35.39 3.51
122 123 3.402681 CCGACCCCTGCTGGATGT 61.403 66.667 11.88 7.82 35.39 3.06
123 124 2.187946 CGACCCCTGCTGGATGTC 59.812 66.667 11.88 15.09 35.39 3.06
124 125 2.187946 GACCCCTGCTGGATGTCG 59.812 66.667 11.88 0.00 35.39 4.35
125 126 3.391665 GACCCCTGCTGGATGTCGG 62.392 68.421 11.88 5.77 35.39 4.79
126 127 3.083349 CCCCTGCTGGATGTCGGA 61.083 66.667 11.88 0.00 35.39 4.55
127 128 2.446848 CCCCTGCTGGATGTCGGAT 61.447 63.158 11.88 0.00 35.39 4.18
128 129 1.227764 CCCTGCTGGATGTCGGATG 60.228 63.158 11.88 0.00 35.39 3.51
129 130 1.689243 CCCTGCTGGATGTCGGATGA 61.689 60.000 11.88 0.00 35.39 2.92
130 131 0.249784 CCTGCTGGATGTCGGATGAG 60.250 60.000 2.92 0.00 34.57 2.90
131 132 0.249784 CTGCTGGATGTCGGATGAGG 60.250 60.000 0.00 0.00 0.00 3.86
132 133 0.977627 TGCTGGATGTCGGATGAGGT 60.978 55.000 0.00 0.00 0.00 3.85
133 134 0.249657 GCTGGATGTCGGATGAGGTC 60.250 60.000 0.00 0.00 0.00 3.85
134 135 0.031314 CTGGATGTCGGATGAGGTCG 59.969 60.000 0.00 0.00 0.00 4.79
135 136 0.683179 TGGATGTCGGATGAGGTCGT 60.683 55.000 0.00 0.00 0.00 4.34
136 137 0.249073 GGATGTCGGATGAGGTCGTG 60.249 60.000 0.00 0.00 0.00 4.35
137 138 0.456221 GATGTCGGATGAGGTCGTGT 59.544 55.000 0.00 0.00 0.00 4.49
138 139 0.895530 ATGTCGGATGAGGTCGTGTT 59.104 50.000 0.00 0.00 0.00 3.32
139 140 0.038618 TGTCGGATGAGGTCGTGTTG 60.039 55.000 0.00 0.00 0.00 3.33
140 141 0.736325 GTCGGATGAGGTCGTGTTGG 60.736 60.000 0.00 0.00 0.00 3.77
141 142 0.896479 TCGGATGAGGTCGTGTTGGA 60.896 55.000 0.00 0.00 0.00 3.53
142 143 0.458543 CGGATGAGGTCGTGTTGGAG 60.459 60.000 0.00 0.00 0.00 3.86
143 144 0.608640 GGATGAGGTCGTGTTGGAGT 59.391 55.000 0.00 0.00 0.00 3.85
144 145 1.673033 GGATGAGGTCGTGTTGGAGTG 60.673 57.143 0.00 0.00 0.00 3.51
145 146 0.320771 ATGAGGTCGTGTTGGAGTGC 60.321 55.000 0.00 0.00 0.00 4.40
146 147 1.367840 GAGGTCGTGTTGGAGTGCT 59.632 57.895 0.00 0.00 0.00 4.40
147 148 0.667792 GAGGTCGTGTTGGAGTGCTC 60.668 60.000 0.00 0.00 0.00 4.26
148 149 2.022129 GGTCGTGTTGGAGTGCTCG 61.022 63.158 0.00 0.00 0.00 5.03
149 150 2.355837 TCGTGTTGGAGTGCTCGC 60.356 61.111 0.00 0.00 0.00 5.03
150 151 3.414700 CGTGTTGGAGTGCTCGCC 61.415 66.667 1.11 1.11 0.00 5.54
151 152 2.031163 GTGTTGGAGTGCTCGCCT 59.969 61.111 9.97 0.00 34.59 5.52
152 153 2.029844 GTGTTGGAGTGCTCGCCTC 61.030 63.158 9.97 4.19 34.59 4.70
156 157 4.500116 GGAGTGCTCGCCTCCGTC 62.500 72.222 0.85 0.00 39.22 4.79
157 158 3.444805 GAGTGCTCGCCTCCGTCT 61.445 66.667 0.00 0.00 35.54 4.18
158 159 2.992114 AGTGCTCGCCTCCGTCTT 60.992 61.111 0.00 0.00 35.54 3.01
159 160 2.507324 GTGCTCGCCTCCGTCTTC 60.507 66.667 0.00 0.00 35.54 2.87
160 161 2.989253 TGCTCGCCTCCGTCTTCA 60.989 61.111 0.00 0.00 35.54 3.02
161 162 2.507324 GCTCGCCTCCGTCTTCAC 60.507 66.667 0.00 0.00 35.54 3.18
162 163 2.202492 CTCGCCTCCGTCTTCACG 60.202 66.667 0.00 0.00 46.29 4.35
163 164 4.415332 TCGCCTCCGTCTTCACGC 62.415 66.667 0.00 0.00 45.29 5.34
180 181 3.140141 CCGCCGGGCAAATGATGT 61.140 61.111 20.71 0.00 0.00 3.06
181 182 1.821759 CCGCCGGGCAAATGATGTA 60.822 57.895 20.71 0.00 0.00 2.29
182 183 1.380403 CCGCCGGGCAAATGATGTAA 61.380 55.000 20.71 0.00 0.00 2.41
183 184 0.667993 CGCCGGGCAAATGATGTAAT 59.332 50.000 20.71 0.00 0.00 1.89
184 185 1.600164 CGCCGGGCAAATGATGTAATG 60.600 52.381 20.71 0.00 0.00 1.90
185 186 1.680735 GCCGGGCAAATGATGTAATGA 59.319 47.619 15.62 0.00 0.00 2.57
186 187 2.100584 GCCGGGCAAATGATGTAATGAA 59.899 45.455 15.62 0.00 0.00 2.57
187 188 3.243839 GCCGGGCAAATGATGTAATGAAT 60.244 43.478 15.62 0.00 0.00 2.57
188 189 4.300803 CCGGGCAAATGATGTAATGAATG 58.699 43.478 0.00 0.00 0.00 2.67
189 190 4.037803 CCGGGCAAATGATGTAATGAATGA 59.962 41.667 0.00 0.00 0.00 2.57
190 191 5.279106 CCGGGCAAATGATGTAATGAATGAT 60.279 40.000 0.00 0.00 0.00 2.45
191 192 6.218019 CGGGCAAATGATGTAATGAATGATT 58.782 36.000 0.00 0.00 0.00 2.57
192 193 6.144886 CGGGCAAATGATGTAATGAATGATTG 59.855 38.462 0.00 0.00 0.00 2.67
193 194 6.987992 GGGCAAATGATGTAATGAATGATTGT 59.012 34.615 0.00 0.00 0.00 2.71
194 195 8.143193 GGGCAAATGATGTAATGAATGATTGTA 58.857 33.333 0.00 0.00 0.00 2.41
195 196 9.701098 GGCAAATGATGTAATGAATGATTGTAT 57.299 29.630 0.00 0.00 0.00 2.29
236 237 8.785184 TTAATATATGGGTGGGGTTAAAAAGG 57.215 34.615 0.00 0.00 0.00 3.11
237 238 4.703101 ATATGGGTGGGGTTAAAAAGGT 57.297 40.909 0.00 0.00 0.00 3.50
238 239 2.871007 TGGGTGGGGTTAAAAAGGTT 57.129 45.000 0.00 0.00 0.00 3.50
239 240 3.987575 TGGGTGGGGTTAAAAAGGTTA 57.012 42.857 0.00 0.00 0.00 2.85
240 241 3.847081 TGGGTGGGGTTAAAAAGGTTAG 58.153 45.455 0.00 0.00 0.00 2.34
241 242 3.466344 TGGGTGGGGTTAAAAAGGTTAGA 59.534 43.478 0.00 0.00 0.00 2.10
242 243 4.084287 GGGTGGGGTTAAAAAGGTTAGAG 58.916 47.826 0.00 0.00 0.00 2.43
243 244 4.448200 GGGTGGGGTTAAAAAGGTTAGAGT 60.448 45.833 0.00 0.00 0.00 3.24
244 245 5.142639 GGTGGGGTTAAAAAGGTTAGAGTT 58.857 41.667 0.00 0.00 0.00 3.01
245 246 5.599656 GGTGGGGTTAAAAAGGTTAGAGTTT 59.400 40.000 0.00 0.00 0.00 2.66
246 247 6.777091 GGTGGGGTTAAAAAGGTTAGAGTTTA 59.223 38.462 0.00 0.00 0.00 2.01
247 248 7.452501 GGTGGGGTTAAAAAGGTTAGAGTTTAT 59.547 37.037 0.00 0.00 0.00 1.40
248 249 9.519191 GTGGGGTTAAAAAGGTTAGAGTTTATA 57.481 33.333 0.00 0.00 0.00 0.98
293 294 7.581213 TTTTTGCCTAGTTCTTGAGAATGAA 57.419 32.000 0.00 0.00 36.33 2.57
294 295 7.581213 TTTTGCCTAGTTCTTGAGAATGAAA 57.419 32.000 0.00 0.00 36.33 2.69
295 296 7.581213 TTTGCCTAGTTCTTGAGAATGAAAA 57.419 32.000 0.00 0.00 36.33 2.29
296 297 7.765695 TTGCCTAGTTCTTGAGAATGAAAAT 57.234 32.000 0.00 0.00 36.33 1.82
297 298 8.862325 TTGCCTAGTTCTTGAGAATGAAAATA 57.138 30.769 0.00 0.00 36.33 1.40
298 299 8.268850 TGCCTAGTTCTTGAGAATGAAAATAC 57.731 34.615 0.00 0.00 36.33 1.89
299 300 8.103305 TGCCTAGTTCTTGAGAATGAAAATACT 58.897 33.333 0.00 0.00 36.33 2.12
300 301 8.951243 GCCTAGTTCTTGAGAATGAAAATACTT 58.049 33.333 0.00 0.00 36.33 2.24
329 330 7.597643 CAATTCATTGTGTTGATTGTTTTGC 57.402 32.000 0.00 0.00 33.22 3.68
330 331 5.731599 TTCATTGTGTTGATTGTTTTGCC 57.268 34.783 0.00 0.00 0.00 4.52
331 332 5.021033 TCATTGTGTTGATTGTTTTGCCT 57.979 34.783 0.00 0.00 0.00 4.75
332 333 6.154203 TCATTGTGTTGATTGTTTTGCCTA 57.846 33.333 0.00 0.00 0.00 3.93
333 334 6.577103 TCATTGTGTTGATTGTTTTGCCTAA 58.423 32.000 0.00 0.00 0.00 2.69
334 335 7.044181 TCATTGTGTTGATTGTTTTGCCTAAA 58.956 30.769 0.00 0.00 0.00 1.85
335 336 7.714377 TCATTGTGTTGATTGTTTTGCCTAAAT 59.286 29.630 0.00 0.00 0.00 1.40
336 337 6.841443 TGTGTTGATTGTTTTGCCTAAATG 57.159 33.333 0.00 0.00 0.00 2.32
337 338 5.236047 TGTGTTGATTGTTTTGCCTAAATGC 59.764 36.000 0.00 0.00 0.00 3.56
338 339 5.236047 GTGTTGATTGTTTTGCCTAAATGCA 59.764 36.000 0.00 0.00 40.07 3.96
339 340 5.996513 TGTTGATTGTTTTGCCTAAATGCAT 59.003 32.000 0.00 0.00 41.70 3.96
340 341 7.117523 GTGTTGATTGTTTTGCCTAAATGCATA 59.882 33.333 0.00 0.00 41.70 3.14
341 342 7.117523 TGTTGATTGTTTTGCCTAAATGCATAC 59.882 33.333 0.00 0.00 41.70 2.39
342 343 6.934056 TGATTGTTTTGCCTAAATGCATACT 58.066 32.000 0.00 0.00 41.70 2.12
343 344 7.035004 TGATTGTTTTGCCTAAATGCATACTC 58.965 34.615 0.00 0.00 41.70 2.59
344 345 6.588719 TTGTTTTGCCTAAATGCATACTCT 57.411 33.333 0.00 0.00 41.70 3.24
345 346 6.588719 TGTTTTGCCTAAATGCATACTCTT 57.411 33.333 0.00 0.00 41.70 2.85
346 347 6.389091 TGTTTTGCCTAAATGCATACTCTTG 58.611 36.000 0.00 0.00 41.70 3.02
347 348 5.581126 TTTGCCTAAATGCATACTCTTGG 57.419 39.130 0.00 0.00 41.70 3.61
348 349 2.951642 TGCCTAAATGCATACTCTTGGC 59.048 45.455 0.00 9.14 36.04 4.52
349 350 2.951642 GCCTAAATGCATACTCTTGGCA 59.048 45.455 0.00 0.00 42.43 4.92
350 351 3.004106 GCCTAAATGCATACTCTTGGCAG 59.996 47.826 0.00 0.00 41.40 4.85
351 352 4.202441 CCTAAATGCATACTCTTGGCAGT 58.798 43.478 0.00 0.00 41.40 4.40
352 353 4.641989 CCTAAATGCATACTCTTGGCAGTT 59.358 41.667 0.00 0.00 46.05 3.16
353 354 5.126061 CCTAAATGCATACTCTTGGCAGTTT 59.874 40.000 0.00 2.35 42.34 2.66
354 355 4.445452 AATGCATACTCTTGGCAGTTTG 57.555 40.909 0.00 0.00 41.40 2.93
355 356 3.138884 TGCATACTCTTGGCAGTTTGA 57.861 42.857 1.09 0.00 32.95 2.69
356 357 3.689347 TGCATACTCTTGGCAGTTTGAT 58.311 40.909 1.09 0.00 32.95 2.57
357 358 4.081406 TGCATACTCTTGGCAGTTTGATT 58.919 39.130 1.09 0.00 32.95 2.57
358 359 4.523943 TGCATACTCTTGGCAGTTTGATTT 59.476 37.500 1.09 0.00 32.95 2.17
359 360 5.010922 TGCATACTCTTGGCAGTTTGATTTT 59.989 36.000 1.09 0.00 32.95 1.82
360 361 5.346822 GCATACTCTTGGCAGTTTGATTTTG 59.653 40.000 1.09 0.00 29.41 2.44
361 362 6.449698 CATACTCTTGGCAGTTTGATTTTGT 58.550 36.000 0.00 0.00 29.41 2.83
362 363 5.343307 ACTCTTGGCAGTTTGATTTTGTT 57.657 34.783 0.00 0.00 0.00 2.83
363 364 5.111293 ACTCTTGGCAGTTTGATTTTGTTG 58.889 37.500 0.00 0.00 0.00 3.33
364 365 5.105392 ACTCTTGGCAGTTTGATTTTGTTGA 60.105 36.000 0.00 0.00 0.00 3.18
365 366 5.916318 TCTTGGCAGTTTGATTTTGTTGAT 58.084 33.333 0.00 0.00 0.00 2.57
366 367 6.347696 TCTTGGCAGTTTGATTTTGTTGATT 58.652 32.000 0.00 0.00 0.00 2.57
367 368 5.987777 TGGCAGTTTGATTTTGTTGATTG 57.012 34.783 0.00 0.00 0.00 2.67
368 369 5.426504 TGGCAGTTTGATTTTGTTGATTGT 58.573 33.333 0.00 0.00 0.00 2.71
369 370 5.523188 TGGCAGTTTGATTTTGTTGATTGTC 59.477 36.000 0.00 0.00 0.00 3.18
370 371 5.754890 GGCAGTTTGATTTTGTTGATTGTCT 59.245 36.000 0.00 0.00 0.00 3.41
371 372 6.258507 GGCAGTTTGATTTTGTTGATTGTCTT 59.741 34.615 0.00 0.00 0.00 3.01
372 373 7.437862 GGCAGTTTGATTTTGTTGATTGTCTTA 59.562 33.333 0.00 0.00 0.00 2.10
373 374 8.981647 GCAGTTTGATTTTGTTGATTGTCTTAT 58.018 29.630 0.00 0.00 0.00 1.73
390 391 7.843490 TGTCTTATTAGATTGTAACTGTGGC 57.157 36.000 0.00 0.00 31.86 5.01
391 392 7.620880 TGTCTTATTAGATTGTAACTGTGGCT 58.379 34.615 0.00 0.00 31.86 4.75
392 393 8.100791 TGTCTTATTAGATTGTAACTGTGGCTT 58.899 33.333 0.00 0.00 31.86 4.35
393 394 8.604890 GTCTTATTAGATTGTAACTGTGGCTTC 58.395 37.037 0.00 0.00 31.86 3.86
394 395 8.318412 TCTTATTAGATTGTAACTGTGGCTTCA 58.682 33.333 0.00 0.00 0.00 3.02
395 396 8.856153 TTATTAGATTGTAACTGTGGCTTCAA 57.144 30.769 0.00 0.00 0.00 2.69
396 397 7.944729 ATTAGATTGTAACTGTGGCTTCAAT 57.055 32.000 0.00 0.00 0.00 2.57
397 398 7.759489 TTAGATTGTAACTGTGGCTTCAATT 57.241 32.000 0.00 0.00 0.00 2.32
398 399 6.655078 AGATTGTAACTGTGGCTTCAATTT 57.345 33.333 0.00 0.00 0.00 1.82
399 400 7.054491 AGATTGTAACTGTGGCTTCAATTTT 57.946 32.000 0.00 0.00 0.00 1.82
400 401 7.500141 AGATTGTAACTGTGGCTTCAATTTTT 58.500 30.769 0.00 0.00 0.00 1.94
401 402 6.900568 TTGTAACTGTGGCTTCAATTTTTG 57.099 33.333 0.00 0.00 0.00 2.44
402 403 5.971763 TGTAACTGTGGCTTCAATTTTTGT 58.028 33.333 0.00 0.00 0.00 2.83
403 404 6.402222 TGTAACTGTGGCTTCAATTTTTGTT 58.598 32.000 0.00 0.00 0.00 2.83
404 405 6.876257 TGTAACTGTGGCTTCAATTTTTGTTT 59.124 30.769 0.00 0.00 0.00 2.83
405 406 6.421377 AACTGTGGCTTCAATTTTTGTTTC 57.579 33.333 0.00 0.00 0.00 2.78
406 407 5.733676 ACTGTGGCTTCAATTTTTGTTTCT 58.266 33.333 0.00 0.00 0.00 2.52
407 408 6.172630 ACTGTGGCTTCAATTTTTGTTTCTT 58.827 32.000 0.00 0.00 0.00 2.52
408 409 6.654582 ACTGTGGCTTCAATTTTTGTTTCTTT 59.345 30.769 0.00 0.00 0.00 2.52
409 410 7.174772 ACTGTGGCTTCAATTTTTGTTTCTTTT 59.825 29.630 0.00 0.00 0.00 2.27
410 411 8.553459 TGTGGCTTCAATTTTTGTTTCTTTTA 57.447 26.923 0.00 0.00 0.00 1.52
411 412 9.003658 TGTGGCTTCAATTTTTGTTTCTTTTAA 57.996 25.926 0.00 0.00 0.00 1.52
412 413 9.833182 GTGGCTTCAATTTTTGTTTCTTTTAAA 57.167 25.926 0.00 0.00 0.00 1.52
422 423 7.773864 TTTGTTTCTTTTAAAAATCCGTCCC 57.226 32.000 1.66 0.00 0.00 4.46
423 424 5.521544 TGTTTCTTTTAAAAATCCGTCCCG 58.478 37.500 1.66 0.00 0.00 5.14
434 435 4.659480 CGTCCCGGAAAACTCGAA 57.341 55.556 0.73 0.00 0.00 3.71
435 436 3.132863 CGTCCCGGAAAACTCGAAT 57.867 52.632 0.73 0.00 0.00 3.34
436 437 1.435577 CGTCCCGGAAAACTCGAATT 58.564 50.000 0.73 0.00 0.00 2.17
437 438 1.392510 CGTCCCGGAAAACTCGAATTC 59.607 52.381 0.73 0.00 0.00 2.17
438 439 1.736126 GTCCCGGAAAACTCGAATTCC 59.264 52.381 0.73 12.16 41.39 3.01
439 440 1.626825 TCCCGGAAAACTCGAATTCCT 59.373 47.619 0.73 0.00 42.40 3.36
440 441 1.737793 CCCGGAAAACTCGAATTCCTG 59.262 52.381 0.73 12.75 42.40 3.86
441 442 1.737793 CCGGAAAACTCGAATTCCTGG 59.262 52.381 17.37 15.82 42.40 4.45
442 443 2.614481 CCGGAAAACTCGAATTCCTGGA 60.614 50.000 19.07 0.00 42.40 3.86
443 444 3.270877 CGGAAAACTCGAATTCCTGGAT 58.729 45.455 17.37 0.00 42.40 3.41
444 445 3.309954 CGGAAAACTCGAATTCCTGGATC 59.690 47.826 17.37 0.00 42.40 3.36
445 446 3.628032 GGAAAACTCGAATTCCTGGATCC 59.372 47.826 4.20 4.20 41.54 3.36
446 447 2.604046 AACTCGAATTCCTGGATCCG 57.396 50.000 7.39 1.76 0.00 4.18
447 448 0.105039 ACTCGAATTCCTGGATCCGC 59.895 55.000 7.39 0.00 0.00 5.54
448 449 0.601311 CTCGAATTCCTGGATCCGCC 60.601 60.000 7.39 0.00 37.10 6.13
449 450 1.146041 CGAATTCCTGGATCCGCCA 59.854 57.895 7.39 0.00 46.96 5.69
450 451 1.160329 CGAATTCCTGGATCCGCCAC 61.160 60.000 7.39 0.00 43.33 5.01
451 452 0.181350 GAATTCCTGGATCCGCCACT 59.819 55.000 7.39 0.00 43.33 4.00
452 453 0.107017 AATTCCTGGATCCGCCACTG 60.107 55.000 7.39 0.00 43.33 3.66
453 454 1.274703 ATTCCTGGATCCGCCACTGT 61.275 55.000 7.39 0.00 43.33 3.55
454 455 0.616395 TTCCTGGATCCGCCACTGTA 60.616 55.000 7.39 0.00 43.33 2.74
455 456 0.616395 TCCTGGATCCGCCACTGTAA 60.616 55.000 7.39 0.00 43.33 2.41
456 457 0.179073 CCTGGATCCGCCACTGTAAG 60.179 60.000 7.39 0.00 43.33 2.34
457 458 0.179073 CTGGATCCGCCACTGTAAGG 60.179 60.000 7.39 0.00 43.33 2.69
462 463 0.759959 TCCGCCACTGTAAGGAAACA 59.240 50.000 0.00 0.00 39.30 2.83
498 499 3.402110 GCAATCGGATCACATACCATGA 58.598 45.455 0.00 0.00 0.00 3.07
499 500 3.434641 GCAATCGGATCACATACCATGAG 59.565 47.826 0.00 0.00 0.00 2.90
502 503 1.800805 GGATCACATACCATGAGGCG 58.199 55.000 0.00 0.00 39.06 5.52
509 510 3.928992 CACATACCATGAGGCGCTATTAG 59.071 47.826 7.64 0.00 39.06 1.73
516 517 1.270305 TGAGGCGCTATTAGCACCATC 60.270 52.381 21.62 16.11 45.58 3.51
587 588 8.409358 AATAACTTAAACTCCACTGAGCAATT 57.591 30.769 0.00 0.00 42.74 2.32
602 604 4.039124 TGAGCAATTGAAAAGGGGTTTCTC 59.961 41.667 10.34 2.19 45.14 2.87
603 605 3.324846 AGCAATTGAAAAGGGGTTTCTCC 59.675 43.478 10.34 0.00 45.14 3.71
639 641 1.203287 GCAGGGCCAAGTTCAAGATTC 59.797 52.381 6.18 0.00 0.00 2.52
647 649 1.714794 AGTTCAAGATTCGGCAGTCG 58.285 50.000 0.00 0.00 40.90 4.18
660 662 2.223745 GGCAGTCGTAAAAGGACCAAA 58.776 47.619 0.00 0.00 33.78 3.28
758 760 4.918201 CGCTTCTCCGGGCATCCC 62.918 72.222 0.00 0.00 41.09 3.85
841 847 0.890542 CCAGCAGCAAACCAGTAGCA 60.891 55.000 0.00 0.00 0.00 3.49
842 848 1.171308 CAGCAGCAAACCAGTAGCAT 58.829 50.000 0.00 0.00 0.00 3.79
908 918 0.408700 AAGTACGACTCCCCAGGACT 59.591 55.000 0.00 0.00 0.00 3.85
935 945 3.438781 CGACCCAATAGCTAGCAAACAAA 59.561 43.478 18.83 0.00 0.00 2.83
940 950 5.048083 CCCAATAGCTAGCAAACAAAGAACA 60.048 40.000 18.83 0.00 0.00 3.18
954 965 2.194201 AGAACAAACACCCCATACGG 57.806 50.000 0.00 0.00 0.00 4.02
983 994 0.979665 CTCAAGGCAGAGGAAGACCA 59.020 55.000 0.00 0.00 38.94 4.02
987 998 0.617249 AGGCAGAGGAAGACCAGGAG 60.617 60.000 0.00 0.00 38.94 3.69
993 1004 2.107366 GAGGAAGACCAGGAGGAAGAG 58.893 57.143 0.00 0.00 38.69 2.85
995 1006 1.553651 GGAAGACCAGGAGGAAGAGGT 60.554 57.143 0.00 0.00 38.69 3.85
996 1007 1.552792 GAAGACCAGGAGGAAGAGGTG 59.447 57.143 0.00 0.00 38.69 4.00
1082 1112 1.518572 GCGGTGATCCAGGTACGTG 60.519 63.158 8.61 8.61 0.00 4.49
1106 1136 2.099592 TCCAGTTCTTGCTTTGTTGCAG 59.900 45.455 0.00 0.00 44.27 4.41
1132 1164 7.394016 ACATGTAGTATGTGAATGGTTCTTCA 58.606 34.615 0.00 0.00 32.84 3.02
1276 1317 1.661463 ACTGCTGGAGATGGAGGAAA 58.339 50.000 2.24 0.00 0.00 3.13
1290 1331 2.251642 GGAAACGCAACGGTGAGCT 61.252 57.895 3.55 0.00 0.00 4.09
1292 1333 2.171489 GAAACGCAACGGTGAGCTCC 62.171 60.000 12.15 2.19 0.00 4.70
1295 1336 2.978824 GCAACGGTGAGCTCCCTA 59.021 61.111 12.15 0.00 0.00 3.53
1296 1337 1.448013 GCAACGGTGAGCTCCCTAC 60.448 63.158 12.15 2.31 0.00 3.18
1297 1338 1.889530 GCAACGGTGAGCTCCCTACT 61.890 60.000 12.15 0.00 0.00 2.57
1298 1339 0.608640 CAACGGTGAGCTCCCTACTT 59.391 55.000 12.15 1.37 0.00 2.24
1299 1340 0.608640 AACGGTGAGCTCCCTACTTG 59.391 55.000 12.15 2.97 0.00 3.16
1300 1341 0.542232 ACGGTGAGCTCCCTACTTGT 60.542 55.000 12.15 3.58 0.00 3.16
1301 1342 0.108615 CGGTGAGCTCCCTACTTGTG 60.109 60.000 12.15 0.00 0.00 3.33
1302 1343 0.977395 GGTGAGCTCCCTACTTGTGT 59.023 55.000 12.15 0.00 0.00 3.72
1303 1344 1.348036 GGTGAGCTCCCTACTTGTGTT 59.652 52.381 12.15 0.00 0.00 3.32
1304 1345 2.224548 GGTGAGCTCCCTACTTGTGTTT 60.225 50.000 12.15 0.00 0.00 2.83
1305 1346 2.808543 GTGAGCTCCCTACTTGTGTTTG 59.191 50.000 12.15 0.00 0.00 2.93
1309 1350 3.646637 AGCTCCCTACTTGTGTTTGTAGT 59.353 43.478 0.00 0.00 35.62 2.73
1312 1353 4.131596 TCCCTACTTGTGTTTGTAGTTGC 58.868 43.478 0.00 0.00 35.62 4.17
1313 1354 3.880490 CCCTACTTGTGTTTGTAGTTGCA 59.120 43.478 0.00 0.00 35.62 4.08
1340 1381 2.094762 ACTAGTTGGGCGTGATGTTC 57.905 50.000 0.00 0.00 0.00 3.18
1346 1390 0.389296 TGGGCGTGATGTTCGTAGTG 60.389 55.000 0.00 0.00 0.00 2.74
1350 1394 1.582502 GCGTGATGTTCGTAGTGCTAC 59.417 52.381 0.00 0.00 0.00 3.58
1351 1395 2.731341 GCGTGATGTTCGTAGTGCTACT 60.731 50.000 7.63 0.00 34.04 2.57
1353 1397 4.272480 CGTGATGTTCGTAGTGCTACTAG 58.728 47.826 7.63 0.00 30.12 2.57
1407 1452 2.013400 TCGTTTTGCAGCTGTGAAGAA 58.987 42.857 16.64 0.46 0.00 2.52
1788 1852 4.722700 GGGGTGCTGCGTGGACAT 62.723 66.667 0.00 0.00 38.87 3.06
1864 1928 1.080705 CTTCGGTTCGTCGCTTCCT 60.081 57.895 0.00 0.00 0.00 3.36
1935 1999 5.690997 ACTCGATCGTGTATGTATGACAT 57.309 39.130 20.34 0.00 42.35 3.06
1952 2016 3.322211 ACATGCCAATGTCATTTGGTG 57.678 42.857 12.67 8.41 43.85 4.17
1953 2017 2.004017 CATGCCAATGTCATTTGGTGC 58.996 47.619 12.67 7.25 46.54 5.01
1956 2020 0.602562 CCAATGTCATTTGGTGCGGT 59.397 50.000 0.00 0.00 41.09 5.68
1957 2021 1.815613 CCAATGTCATTTGGTGCGGTA 59.184 47.619 0.00 0.00 41.09 4.02
1958 2022 2.159393 CCAATGTCATTTGGTGCGGTAG 60.159 50.000 0.00 0.00 41.09 3.18
1960 2024 2.779755 TGTCATTTGGTGCGGTAGAT 57.220 45.000 0.00 0.00 0.00 1.98
1962 2026 4.415881 TGTCATTTGGTGCGGTAGATAT 57.584 40.909 0.00 0.00 0.00 1.63
1963 2027 4.776349 TGTCATTTGGTGCGGTAGATATT 58.224 39.130 0.00 0.00 0.00 1.28
1964 2028 5.919755 TGTCATTTGGTGCGGTAGATATTA 58.080 37.500 0.00 0.00 0.00 0.98
1965 2029 5.989168 TGTCATTTGGTGCGGTAGATATTAG 59.011 40.000 0.00 0.00 0.00 1.73
1966 2030 5.408604 GTCATTTGGTGCGGTAGATATTAGG 59.591 44.000 0.00 0.00 0.00 2.69
1967 2031 4.345859 TTTGGTGCGGTAGATATTAGGG 57.654 45.455 0.00 0.00 0.00 3.53
1968 2032 2.253610 TGGTGCGGTAGATATTAGGGG 58.746 52.381 0.00 0.00 0.00 4.79
1969 2033 1.066358 GGTGCGGTAGATATTAGGGGC 60.066 57.143 0.00 0.00 0.00 5.80
1970 2034 1.066358 GTGCGGTAGATATTAGGGGCC 60.066 57.143 0.00 0.00 0.00 5.80
1971 2035 1.203262 TGCGGTAGATATTAGGGGCCT 60.203 52.381 0.84 0.00 0.00 5.19
1972 2036 1.481363 GCGGTAGATATTAGGGGCCTC 59.519 57.143 0.84 0.00 0.00 4.70
1973 2037 2.888911 GCGGTAGATATTAGGGGCCTCT 60.889 54.545 11.71 11.71 0.00 3.69
1974 2038 3.442076 CGGTAGATATTAGGGGCCTCTT 58.558 50.000 12.52 0.00 0.00 2.85
1975 2039 3.838903 CGGTAGATATTAGGGGCCTCTTT 59.161 47.826 12.52 0.58 0.00 2.52
1976 2040 4.322801 CGGTAGATATTAGGGGCCTCTTTG 60.323 50.000 12.52 0.00 0.00 2.77
1977 2041 4.844655 GGTAGATATTAGGGGCCTCTTTGA 59.155 45.833 12.52 0.00 0.00 2.69
1978 2042 5.489278 GGTAGATATTAGGGGCCTCTTTGAT 59.511 44.000 12.52 5.69 0.00 2.57
1979 2043 6.012421 GGTAGATATTAGGGGCCTCTTTGATT 60.012 42.308 12.52 0.00 0.00 2.57
1980 2044 6.133253 AGATATTAGGGGCCTCTTTGATTC 57.867 41.667 12.52 1.92 0.00 2.52
1981 2045 5.612688 AGATATTAGGGGCCTCTTTGATTCA 59.387 40.000 12.52 0.00 0.00 2.57
1982 2046 4.608170 ATTAGGGGCCTCTTTGATTCAA 57.392 40.909 12.52 0.00 0.00 2.69
1983 2047 2.999185 AGGGGCCTCTTTGATTCAAA 57.001 45.000 0.00 11.19 0.00 2.69
2024 2088 8.694581 TTTTTAAGGATTCGAACCTTTAGGAA 57.305 30.769 26.28 16.72 44.13 3.36
2025 2089 8.873186 TTTTAAGGATTCGAACCTTTAGGAAT 57.127 30.769 26.28 11.34 44.13 3.01
2026 2090 8.873186 TTTAAGGATTCGAACCTTTAGGAATT 57.127 30.769 26.28 10.82 44.13 2.17
2027 2091 8.873186 TTAAGGATTCGAACCTTTAGGAATTT 57.127 30.769 26.28 10.31 44.13 1.82
2028 2092 7.776618 AAGGATTCGAACCTTTAGGAATTTT 57.223 32.000 19.84 2.09 44.13 1.82
2029 2093 7.776618 AGGATTCGAACCTTTAGGAATTTTT 57.223 32.000 0.00 0.00 38.94 1.94
2030 2094 7.827701 AGGATTCGAACCTTTAGGAATTTTTC 58.172 34.615 0.00 0.00 38.94 2.29
2031 2095 7.093902 AGGATTCGAACCTTTAGGAATTTTTCC 60.094 37.037 0.00 0.00 41.55 3.13
2042 2106 4.863152 GGAATTTTTCCCGCATTGATTG 57.137 40.909 0.00 0.00 44.30 2.67
2043 2107 4.252878 GGAATTTTTCCCGCATTGATTGT 58.747 39.130 0.00 0.00 44.30 2.71
2044 2108 4.694982 GGAATTTTTCCCGCATTGATTGTT 59.305 37.500 0.00 0.00 44.30 2.83
2045 2109 5.181056 GGAATTTTTCCCGCATTGATTGTTT 59.819 36.000 0.00 0.00 44.30 2.83
2046 2110 5.610235 ATTTTTCCCGCATTGATTGTTTG 57.390 34.783 0.00 0.00 0.00 2.93
2047 2111 4.327982 TTTTCCCGCATTGATTGTTTGA 57.672 36.364 0.00 0.00 0.00 2.69
2048 2112 4.533919 TTTCCCGCATTGATTGTTTGAT 57.466 36.364 0.00 0.00 0.00 2.57
2049 2113 4.533919 TTCCCGCATTGATTGTTTGATT 57.466 36.364 0.00 0.00 0.00 2.57
2050 2114 4.108699 TCCCGCATTGATTGTTTGATTC 57.891 40.909 0.00 0.00 0.00 2.52
2051 2115 3.509184 TCCCGCATTGATTGTTTGATTCA 59.491 39.130 0.00 0.00 0.00 2.57
2052 2116 3.613737 CCCGCATTGATTGTTTGATTCAC 59.386 43.478 0.00 0.00 0.00 3.18
2053 2117 4.236147 CCGCATTGATTGTTTGATTCACA 58.764 39.130 0.00 0.00 0.00 3.58
2054 2118 4.325204 CCGCATTGATTGTTTGATTCACAG 59.675 41.667 0.00 0.00 0.00 3.66
2055 2119 4.325204 CGCATTGATTGTTTGATTCACAGG 59.675 41.667 0.00 0.00 0.00 4.00
2056 2120 5.472148 GCATTGATTGTTTGATTCACAGGA 58.528 37.500 0.00 0.00 0.00 3.86
2057 2121 6.103997 GCATTGATTGTTTGATTCACAGGAT 58.896 36.000 0.00 0.00 0.00 3.24
2058 2122 6.592607 GCATTGATTGTTTGATTCACAGGATT 59.407 34.615 0.00 0.00 0.00 3.01
2059 2123 7.412563 GCATTGATTGTTTGATTCACAGGATTG 60.413 37.037 0.00 0.00 0.00 2.67
2060 2124 6.897706 TGATTGTTTGATTCACAGGATTGA 57.102 33.333 0.00 0.00 0.00 2.57
2061 2125 7.287512 TGATTGTTTGATTCACAGGATTGAA 57.712 32.000 0.00 0.00 39.79 2.69
2062 2126 7.898918 TGATTGTTTGATTCACAGGATTGAAT 58.101 30.769 0.00 0.00 46.73 2.57
2099 2163 9.921637 TTTTTCCAATGGATTCATTTGTACTAC 57.078 29.630 1.39 0.00 41.29 2.73
2100 2164 8.642935 TTTCCAATGGATTCATTTGTACTACA 57.357 30.769 1.39 0.00 41.29 2.74
2101 2165 8.821686 TTCCAATGGATTCATTTGTACTACAT 57.178 30.769 1.39 0.00 41.29 2.29
2102 2166 8.821686 TCCAATGGATTCATTTGTACTACATT 57.178 30.769 0.00 0.00 41.29 2.71
2103 2167 9.253832 TCCAATGGATTCATTTGTACTACATTT 57.746 29.630 0.00 0.00 41.29 2.32
2104 2168 9.520204 CCAATGGATTCATTTGTACTACATTTC 57.480 33.333 0.00 0.00 41.29 2.17
2116 2180 9.967451 TTTGTACTACATTTCATAGGAATTCCA 57.033 29.630 26.22 12.59 38.89 3.53
2117 2181 9.613428 TTGTACTACATTTCATAGGAATTCCAG 57.387 33.333 26.22 15.09 38.89 3.86
2118 2182 7.715249 TGTACTACATTTCATAGGAATTCCAGC 59.285 37.037 26.22 0.00 38.89 4.85
2119 2183 6.662755 ACTACATTTCATAGGAATTCCAGCA 58.337 36.000 26.22 11.24 38.89 4.41
2120 2184 7.293073 ACTACATTTCATAGGAATTCCAGCAT 58.707 34.615 26.22 13.01 38.89 3.79
2121 2185 6.645790 ACATTTCATAGGAATTCCAGCATC 57.354 37.500 26.22 0.00 38.89 3.91
2122 2186 5.537674 ACATTTCATAGGAATTCCAGCATCC 59.462 40.000 26.22 0.00 38.89 3.51
2123 2187 4.794311 TTCATAGGAATTCCAGCATCCA 57.206 40.909 26.22 1.22 38.89 3.41
2124 2188 4.090761 TCATAGGAATTCCAGCATCCAC 57.909 45.455 26.22 0.00 38.89 4.02
2125 2189 3.718434 TCATAGGAATTCCAGCATCCACT 59.282 43.478 26.22 4.84 38.89 4.00
2126 2190 2.725221 AGGAATTCCAGCATCCACTC 57.275 50.000 26.22 0.00 38.89 3.51
2127 2191 1.213926 AGGAATTCCAGCATCCACTCC 59.786 52.381 26.22 0.00 38.89 3.85
2128 2192 1.064463 GGAATTCCAGCATCCACTCCA 60.064 52.381 20.04 0.00 35.64 3.86
2129 2193 2.621407 GGAATTCCAGCATCCACTCCAA 60.621 50.000 20.04 0.00 35.64 3.53
2130 2194 2.134789 ATTCCAGCATCCACTCCAAC 57.865 50.000 0.00 0.00 0.00 3.77
2131 2195 0.038166 TTCCAGCATCCACTCCAACC 59.962 55.000 0.00 0.00 0.00 3.77
2132 2196 0.842030 TCCAGCATCCACTCCAACCT 60.842 55.000 0.00 0.00 0.00 3.50
2133 2197 0.393537 CCAGCATCCACTCCAACCTC 60.394 60.000 0.00 0.00 0.00 3.85
2134 2198 0.617413 CAGCATCCACTCCAACCTCT 59.383 55.000 0.00 0.00 0.00 3.69
2135 2199 1.004044 CAGCATCCACTCCAACCTCTT 59.996 52.381 0.00 0.00 0.00 2.85
2136 2200 1.004044 AGCATCCACTCCAACCTCTTG 59.996 52.381 0.00 0.00 0.00 3.02
2137 2201 1.003580 GCATCCACTCCAACCTCTTGA 59.996 52.381 0.00 0.00 0.00 3.02
2138 2202 2.553028 GCATCCACTCCAACCTCTTGAA 60.553 50.000 0.00 0.00 0.00 2.69
2139 2203 3.754965 CATCCACTCCAACCTCTTGAAA 58.245 45.455 0.00 0.00 0.00 2.69
2140 2204 3.492102 TCCACTCCAACCTCTTGAAAG 57.508 47.619 0.00 0.00 0.00 2.62
2141 2205 3.045634 TCCACTCCAACCTCTTGAAAGA 58.954 45.455 0.00 0.00 0.00 2.52
2142 2206 3.458118 TCCACTCCAACCTCTTGAAAGAA 59.542 43.478 0.00 0.00 34.03 2.52
2143 2207 4.080015 TCCACTCCAACCTCTTGAAAGAAA 60.080 41.667 0.00 0.00 34.03 2.52
2144 2208 4.829492 CCACTCCAACCTCTTGAAAGAAAT 59.171 41.667 0.00 0.00 34.03 2.17
2145 2209 5.302823 CCACTCCAACCTCTTGAAAGAAATT 59.697 40.000 0.00 0.00 34.03 1.82
2146 2210 6.442112 CACTCCAACCTCTTGAAAGAAATTC 58.558 40.000 0.00 0.00 38.60 2.17
2147 2211 6.264067 CACTCCAACCTCTTGAAAGAAATTCT 59.736 38.462 0.00 0.00 38.92 2.40
2148 2212 6.836007 ACTCCAACCTCTTGAAAGAAATTCTT 59.164 34.615 1.80 1.80 38.59 2.52
2150 2214 7.491682 TCCAACCTCTTGAAAGAAATTCTTTG 58.508 34.615 23.81 11.03 45.85 2.77
2151 2215 7.124147 TCCAACCTCTTGAAAGAAATTCTTTGT 59.876 33.333 23.81 12.22 45.85 2.83
2152 2216 7.765819 CCAACCTCTTGAAAGAAATTCTTTGTT 59.234 33.333 23.81 16.68 45.85 2.83
2153 2217 9.154847 CAACCTCTTGAAAGAAATTCTTTGTTT 57.845 29.630 23.81 4.82 45.85 2.83
2154 2218 9.725019 AACCTCTTGAAAGAAATTCTTTGTTTT 57.275 25.926 23.81 1.07 45.85 2.43
2155 2219 9.725019 ACCTCTTGAAAGAAATTCTTTGTTTTT 57.275 25.926 23.81 0.32 45.85 1.94
2158 2222 9.942850 TCTTGAAAGAAATTCTTTGTTTTTCCT 57.057 25.926 23.81 0.00 45.85 3.36
2180 2244 9.513906 TTCCTATGATACAATCAAACAAACTCA 57.486 29.630 0.00 0.00 43.50 3.41
2181 2245 9.513906 TCCTATGATACAATCAAACAAACTCAA 57.486 29.630 0.00 0.00 43.50 3.02
2185 2249 9.643693 ATGATACAATCAAACAAACTCAAATCC 57.356 29.630 0.00 0.00 43.50 3.01
2186 2250 8.859090 TGATACAATCAAACAAACTCAAATCCT 58.141 29.630 0.00 0.00 36.11 3.24
2197 2261 9.753674 AACAAACTCAAATCCTATAGAAATCCA 57.246 29.630 0.00 0.00 0.00 3.41
2198 2262 9.753674 ACAAACTCAAATCCTATAGAAATCCAA 57.246 29.630 0.00 0.00 0.00 3.53
2201 2265 9.927081 AACTCAAATCCTATAGAAATCCAATGT 57.073 29.630 0.00 0.00 0.00 2.71
2202 2266 9.347240 ACTCAAATCCTATAGAAATCCAATGTG 57.653 33.333 0.00 0.00 0.00 3.21
2203 2267 8.169977 TCAAATCCTATAGAAATCCAATGTGC 57.830 34.615 0.00 0.00 0.00 4.57
2204 2268 7.779326 TCAAATCCTATAGAAATCCAATGTGCA 59.221 33.333 0.00 0.00 0.00 4.57
2205 2269 8.582437 CAAATCCTATAGAAATCCAATGTGCAT 58.418 33.333 0.00 0.00 0.00 3.96
2206 2270 7.698506 ATCCTATAGAAATCCAATGTGCATG 57.301 36.000 0.00 0.00 0.00 4.06
2207 2271 6.604171 TCCTATAGAAATCCAATGTGCATGT 58.396 36.000 0.00 0.00 0.00 3.21
2208 2272 6.712095 TCCTATAGAAATCCAATGTGCATGTC 59.288 38.462 0.00 0.00 0.00 3.06
2209 2273 6.487668 CCTATAGAAATCCAATGTGCATGTCA 59.512 38.462 0.00 0.00 0.00 3.58
2210 2274 6.971726 ATAGAAATCCAATGTGCATGTCAT 57.028 33.333 0.00 0.00 0.00 3.06
2211 2275 5.670792 AGAAATCCAATGTGCATGTCATT 57.329 34.783 10.79 10.79 36.16 2.57
2212 2276 6.045072 AGAAATCCAATGTGCATGTCATTT 57.955 33.333 12.96 0.00 33.92 2.32
2213 2277 6.103997 AGAAATCCAATGTGCATGTCATTTC 58.896 36.000 12.96 1.47 33.92 2.17
2214 2278 5.408880 AATCCAATGTGCATGTCATTTCA 57.591 34.783 12.96 6.00 33.92 2.69
2215 2279 4.868314 TCCAATGTGCATGTCATTTCAA 57.132 36.364 12.96 3.16 33.92 2.69
2216 2280 5.408880 TCCAATGTGCATGTCATTTCAAT 57.591 34.783 12.96 0.00 33.92 2.57
2217 2281 5.412640 TCCAATGTGCATGTCATTTCAATC 58.587 37.500 12.96 0.00 33.92 2.67
2218 2282 4.569162 CCAATGTGCATGTCATTTCAATCC 59.431 41.667 12.96 0.00 33.92 3.01
2219 2283 5.416083 CAATGTGCATGTCATTTCAATCCT 58.584 37.500 12.96 0.00 33.92 3.24
2220 2284 6.406065 CCAATGTGCATGTCATTTCAATCCTA 60.406 38.462 12.96 0.00 33.92 2.94
2221 2285 5.565592 TGTGCATGTCATTTCAATCCTAC 57.434 39.130 0.00 0.00 0.00 3.18
2222 2286 5.008980 TGTGCATGTCATTTCAATCCTACA 58.991 37.500 0.00 0.00 0.00 2.74
2223 2287 5.653330 TGTGCATGTCATTTCAATCCTACAT 59.347 36.000 0.00 0.00 0.00 2.29
2224 2288 6.153170 TGTGCATGTCATTTCAATCCTACATT 59.847 34.615 0.00 0.00 0.00 2.71
2225 2289 7.037438 GTGCATGTCATTTCAATCCTACATTT 58.963 34.615 0.00 0.00 0.00 2.32
2226 2290 7.546667 GTGCATGTCATTTCAATCCTACATTTT 59.453 33.333 0.00 0.00 0.00 1.82
2227 2291 8.095792 TGCATGTCATTTCAATCCTACATTTTT 58.904 29.630 0.00 0.00 0.00 1.94
2228 2292 8.598075 GCATGTCATTTCAATCCTACATTTTTC 58.402 33.333 0.00 0.00 0.00 2.29
2229 2293 9.090692 CATGTCATTTCAATCCTACATTTTTCC 57.909 33.333 0.00 0.00 0.00 3.13
2230 2294 8.421249 TGTCATTTCAATCCTACATTTTTCCT 57.579 30.769 0.00 0.00 0.00 3.36
2231 2295 9.527157 TGTCATTTCAATCCTACATTTTTCCTA 57.473 29.630 0.00 0.00 0.00 2.94
2238 2302 9.699410 TCAATCCTACATTTTTCCTATTCATGT 57.301 29.630 0.00 0.00 32.80 3.21
2239 2303 9.740239 CAATCCTACATTTTTCCTATTCATGTG 57.260 33.333 0.00 0.00 30.70 3.21
2240 2304 9.479549 AATCCTACATTTTTCCTATTCATGTGT 57.520 29.630 0.00 0.00 30.70 3.72
2241 2305 8.877864 TCCTACATTTTTCCTATTCATGTGTT 57.122 30.769 0.00 0.00 30.70 3.32
2242 2306 9.308000 TCCTACATTTTTCCTATTCATGTGTTT 57.692 29.630 0.00 0.00 30.70 2.83
2246 2310 8.558700 ACATTTTTCCTATTCATGTGTTTTTGC 58.441 29.630 0.00 0.00 0.00 3.68
2247 2311 8.557864 CATTTTTCCTATTCATGTGTTTTTGCA 58.442 29.630 0.00 0.00 0.00 4.08
2249 2313 8.674263 TTTTCCTATTCATGTGTTTTTGCAAT 57.326 26.923 0.00 0.00 0.00 3.56
2251 2320 6.397272 TCCTATTCATGTGTTTTTGCAATCC 58.603 36.000 0.00 0.00 0.00 3.01
2266 2335 2.223433 GCAATCCTGCGAATCAAAGAGG 60.223 50.000 0.00 0.00 39.20 3.69
2267 2336 1.673168 ATCCTGCGAATCAAAGAGGC 58.327 50.000 0.00 0.00 0.00 4.70
2269 2338 1.379642 CCTGCGAATCAAAGAGGCCC 61.380 60.000 0.00 0.00 0.00 5.80
2280 2349 0.178873 AAGAGGCCCTAGGTGTGGAA 60.179 55.000 8.29 0.00 0.00 3.53
2342 2411 1.814394 TGCACATGACTGAGCCAAATC 59.186 47.619 0.00 0.00 38.09 2.17
2610 2906 6.756542 AGTAACTTGAAGGAAAATTGTGCAAC 59.243 34.615 0.00 0.00 37.35 4.17
2619 2915 3.308438 AAATTGTGCAACTCATCAGGC 57.692 42.857 0.00 0.00 38.04 4.85
2643 2939 1.298859 GAAAGACGGCGCACTTGGAT 61.299 55.000 17.70 5.52 0.00 3.41
2763 3059 1.291877 GCAACGTGCTCCTCGACAAT 61.292 55.000 0.00 0.00 40.96 2.71
2766 3062 2.734606 CAACGTGCTCCTCGACAATAAA 59.265 45.455 0.00 0.00 0.00 1.40
2868 3164 2.852413 CGTCGGAACATAGTAAGTGCTG 59.148 50.000 0.00 0.00 0.00 4.41
2870 3166 3.858238 GTCGGAACATAGTAAGTGCTGAC 59.142 47.826 9.24 9.24 42.14 3.51
2871 3167 3.119245 TCGGAACATAGTAAGTGCTGACC 60.119 47.826 0.00 0.00 0.00 4.02
2873 3169 3.055385 GGAACATAGTAAGTGCTGACCCA 60.055 47.826 0.00 0.00 0.00 4.51
2946 3264 6.316890 AGTTGCTTGAAAATTGAAAATGCAGT 59.683 30.769 0.00 0.00 0.00 4.40
3042 3360 3.136750 CTGGAGATCCTCAGCGGG 58.863 66.667 0.00 0.00 36.82 6.13
3103 3421 1.469251 CCCTCATCCAAGACGTACGTG 60.469 57.143 28.16 11.62 0.00 4.49
3111 3429 3.119424 TCCAAGACGTACGTGATTGCATA 60.119 43.478 28.16 14.13 0.00 3.14
3121 3439 2.735663 CGTGATTGCATAGCTCTCCATC 59.264 50.000 0.00 0.00 0.00 3.51
3122 3440 3.072944 GTGATTGCATAGCTCTCCATCC 58.927 50.000 0.00 0.00 0.00 3.51
3123 3441 2.707257 TGATTGCATAGCTCTCCATCCA 59.293 45.455 0.00 0.00 0.00 3.41
3124 3442 3.329814 TGATTGCATAGCTCTCCATCCAT 59.670 43.478 0.00 0.00 0.00 3.41
3138 3456 2.684374 CCATCCATGAAAATCGCTCACA 59.316 45.455 0.00 0.00 0.00 3.58
3423 3757 0.386985 GTTCGCGAGTCCGAAGAAGT 60.387 55.000 9.59 0.00 46.51 3.01
3434 3768 2.920912 AAGAAGTCCCCGGCGTCA 60.921 61.111 6.01 0.00 0.00 4.35
3566 3905 0.319083 TGTGTATCGTGCGGGAGTTT 59.681 50.000 0.00 0.00 0.00 2.66
3660 4000 0.247185 TGACAGCATGAGCATCGTCA 59.753 50.000 0.00 0.00 45.49 4.35
3695 4035 3.665675 ATTCTGTCAGCCCGGCGAC 62.666 63.158 20.69 20.69 34.56 5.19
3710 4052 2.532235 GGCGACGTTGGTTTTTCTTTT 58.468 42.857 4.64 0.00 0.00 2.27
3711 4053 2.532723 GGCGACGTTGGTTTTTCTTTTC 59.467 45.455 4.64 0.00 0.00 2.29
3733 4075 3.572584 CATTCTTTCAGCAAGAGCAACC 58.427 45.455 0.00 0.00 42.76 3.77
3765 4107 9.613428 CCCTGTAAATATCTCATTACTGTTTCA 57.387 33.333 0.00 0.00 34.02 2.69
3887 4230 2.867624 TGGAGATGCTTTGAACTTGCT 58.132 42.857 0.00 0.00 0.00 3.91
3888 4231 4.019792 TGGAGATGCTTTGAACTTGCTA 57.980 40.909 0.00 0.00 0.00 3.49
3957 4301 5.914898 AAATCGATCTTTTTGGTAAGGGG 57.085 39.130 0.00 0.00 0.00 4.79
3958 4302 4.586306 ATCGATCTTTTTGGTAAGGGGT 57.414 40.909 0.00 0.00 0.00 4.95
3965 4309 0.558712 TTTGGTAAGGGGTTGGTGCT 59.441 50.000 0.00 0.00 0.00 4.40
3979 4323 1.032014 GGTGCTGCTGAAAGGAACAA 58.968 50.000 0.00 0.00 30.32 2.83
3980 4324 1.408702 GGTGCTGCTGAAAGGAACAAA 59.591 47.619 0.00 0.00 30.32 2.83
3982 4326 2.098614 TGCTGCTGAAAGGAACAAACA 58.901 42.857 0.00 0.00 29.53 2.83
4126 4471 2.323599 TCATCATCAGAGGCCACTAGG 58.676 52.381 5.01 0.00 38.23 3.02
4127 4472 1.347050 CATCATCAGAGGCCACTAGGG 59.653 57.143 5.01 0.00 40.85 3.53
4129 4474 1.573857 TCATCAGAGGCCACTAGGGTA 59.426 52.381 5.01 0.00 39.65 3.69
4136 4481 3.790408 AGAGGCCACTAGGGTAGTAGTAA 59.210 47.826 5.01 0.00 37.23 2.24
4137 4482 4.419537 AGAGGCCACTAGGGTAGTAGTAAT 59.580 45.833 5.01 0.00 37.23 1.89
4142 4487 6.317391 GGCCACTAGGGTAGTAGTAATATACG 59.683 46.154 0.00 0.00 37.23 3.06
4146 4491 8.260818 CACTAGGGTAGTAGTAATATACGGCTA 58.739 40.741 0.00 0.00 37.23 3.93
4151 4496 7.279758 GGGTAGTAGTAATATACGGCTAGACTG 59.720 44.444 0.00 0.00 0.00 3.51
4156 4501 6.777782 AGTAATATACGGCTAGACTGGTAGT 58.222 40.000 0.00 0.00 0.00 2.73
4160 4505 3.641434 ACGGCTAGACTGGTAGTAGAA 57.359 47.619 0.00 0.00 0.00 2.10
4161 4506 3.277715 ACGGCTAGACTGGTAGTAGAAC 58.722 50.000 0.00 0.00 0.00 3.01
4162 4507 3.276857 CGGCTAGACTGGTAGTAGAACA 58.723 50.000 0.00 0.00 0.00 3.18
4163 4508 3.065095 CGGCTAGACTGGTAGTAGAACAC 59.935 52.174 0.00 0.00 0.00 3.32
4164 4509 3.065095 GGCTAGACTGGTAGTAGAACACG 59.935 52.174 0.00 0.00 0.00 4.49
4167 4512 5.526846 GCTAGACTGGTAGTAGAACACGTAT 59.473 44.000 0.00 0.00 0.00 3.06
4169 4514 6.192234 AGACTGGTAGTAGAACACGTATTG 57.808 41.667 0.00 0.00 0.00 1.90
4222 4567 0.821517 TAACGACCTCATGACGCCAT 59.178 50.000 4.28 0.00 0.00 4.40
4303 4652 2.254051 CCCGCACGCGAACAAAAT 59.746 55.556 15.93 0.00 42.83 1.82
4305 4654 0.791610 CCCGCACGCGAACAAAATAC 60.792 55.000 15.93 0.00 42.83 1.89
4393 4777 4.752879 GCGGCTAACAGCGACCCA 62.753 66.667 0.00 0.00 43.62 4.51
4436 4820 1.130054 TGCTCTGACTTCCAAGGCCT 61.130 55.000 0.00 0.00 31.13 5.19
4495 4885 3.398134 CGATCGATCGCTTGGCCG 61.398 66.667 32.34 9.59 43.84 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.827898 GACTCAGGCCTCGTCGGG 61.828 72.222 0.00 0.00 0.00 5.14
12 13 2.272918 GAAGACTCAGGCCTCGTCGG 62.273 65.000 20.45 3.64 33.10 4.79
13 14 1.137825 GAAGACTCAGGCCTCGTCG 59.862 63.158 20.45 4.00 33.10 5.12
14 15 0.172352 CAGAAGACTCAGGCCTCGTC 59.828 60.000 19.51 19.51 0.00 4.20
15 16 1.882989 GCAGAAGACTCAGGCCTCGT 61.883 60.000 0.00 2.20 0.00 4.18
16 17 1.153667 GCAGAAGACTCAGGCCTCG 60.154 63.158 0.00 0.00 0.00 4.63
17 18 0.390998 GTGCAGAAGACTCAGGCCTC 60.391 60.000 0.00 0.00 0.00 4.70
18 19 1.676384 GTGCAGAAGACTCAGGCCT 59.324 57.895 0.00 0.00 0.00 5.19
19 20 1.376553 GGTGCAGAAGACTCAGGCC 60.377 63.158 0.00 0.00 0.00 5.19
20 21 1.376553 GGGTGCAGAAGACTCAGGC 60.377 63.158 0.00 0.00 0.00 4.85
21 22 0.036577 CTGGGTGCAGAAGACTCAGG 60.037 60.000 0.00 0.00 38.14 3.86
22 23 0.972134 TCTGGGTGCAGAAGACTCAG 59.028 55.000 0.00 0.00 42.46 3.35
23 24 0.681733 GTCTGGGTGCAGAAGACTCA 59.318 55.000 13.54 0.00 37.84 3.41
24 25 0.036858 GGTCTGGGTGCAGAAGACTC 60.037 60.000 18.02 8.68 40.18 3.36
25 26 1.484444 GGGTCTGGGTGCAGAAGACT 61.484 60.000 18.02 0.00 40.18 3.24
26 27 1.003233 GGGTCTGGGTGCAGAAGAC 60.003 63.158 12.75 12.75 39.70 3.01
27 28 2.224159 GGGGTCTGGGTGCAGAAGA 61.224 63.158 0.00 0.00 32.39 2.87
28 29 2.352805 GGGGTCTGGGTGCAGAAG 59.647 66.667 0.00 0.00 32.39 2.85
29 30 3.636231 CGGGGTCTGGGTGCAGAA 61.636 66.667 0.00 0.00 32.39 3.02
30 31 4.954118 ACGGGGTCTGGGTGCAGA 62.954 66.667 0.00 0.00 0.00 4.26
31 32 4.394712 GACGGGGTCTGGGTGCAG 62.395 72.222 0.00 0.00 0.00 4.41
34 35 4.065281 GACGACGGGGTCTGGGTG 62.065 72.222 0.00 0.00 34.09 4.61
37 38 3.760035 CAGGACGACGGGGTCTGG 61.760 72.222 0.00 0.00 37.12 3.86
38 39 3.760035 CCAGGACGACGGGGTCTG 61.760 72.222 0.00 1.19 37.12 3.51
39 40 3.298300 ATCCAGGACGACGGGGTCT 62.298 63.158 0.00 0.00 37.12 3.85
40 41 2.758737 ATCCAGGACGACGGGGTC 60.759 66.667 0.00 0.00 34.87 4.46
41 42 2.758737 GATCCAGGACGACGGGGT 60.759 66.667 0.00 0.00 34.87 4.95
42 43 2.442272 AGATCCAGGACGACGGGG 60.442 66.667 0.00 0.00 34.87 5.73
43 44 2.835705 CGAGATCCAGGACGACGGG 61.836 68.421 0.00 0.00 35.52 5.28
44 45 2.716244 CGAGATCCAGGACGACGG 59.284 66.667 0.00 0.00 0.00 4.79
45 46 2.024871 GCGAGATCCAGGACGACG 59.975 66.667 2.15 4.67 0.00 5.12
46 47 2.024871 CGCGAGATCCAGGACGAC 59.975 66.667 0.00 0.00 0.00 4.34
47 48 3.209812 CCGCGAGATCCAGGACGA 61.210 66.667 8.23 0.00 0.00 4.20
48 49 3.518998 ACCGCGAGATCCAGGACG 61.519 66.667 8.23 0.00 0.00 4.79
49 50 2.105128 CACCGCGAGATCCAGGAC 59.895 66.667 8.23 0.00 0.00 3.85
50 51 3.147595 CCACCGCGAGATCCAGGA 61.148 66.667 8.23 0.00 0.00 3.86
51 52 3.019003 AACCACCGCGAGATCCAGG 62.019 63.158 8.23 0.41 0.00 4.45
52 53 1.811266 CAACCACCGCGAGATCCAG 60.811 63.158 8.23 0.00 0.00 3.86
53 54 2.264480 CAACCACCGCGAGATCCA 59.736 61.111 8.23 0.00 0.00 3.41
54 55 2.511600 CCAACCACCGCGAGATCC 60.512 66.667 8.23 0.00 0.00 3.36
55 56 3.195698 GCCAACCACCGCGAGATC 61.196 66.667 8.23 0.00 0.00 2.75
56 57 4.778143 GGCCAACCACCGCGAGAT 62.778 66.667 8.23 0.00 35.26 2.75
81 82 4.379243 ACTCGCGCTGGGACAAGG 62.379 66.667 5.56 0.00 38.70 3.61
82 83 2.811317 GACTCGCGCTGGGACAAG 60.811 66.667 5.56 0.00 38.70 3.16
83 84 4.717629 CGACTCGCGCTGGGACAA 62.718 66.667 5.56 0.00 38.70 3.18
103 104 4.414956 ATCCAGCAGGGGTCGGGA 62.415 66.667 0.00 0.00 37.22 5.14
104 105 4.181010 CATCCAGCAGGGGTCGGG 62.181 72.222 0.00 0.00 37.22 5.14
105 106 3.391665 GACATCCAGCAGGGGTCGG 62.392 68.421 0.00 0.00 37.22 4.79
106 107 2.187946 GACATCCAGCAGGGGTCG 59.812 66.667 0.00 0.00 37.22 4.79
107 108 2.187946 CGACATCCAGCAGGGGTC 59.812 66.667 9.73 9.73 36.72 4.46
108 109 3.402681 CCGACATCCAGCAGGGGT 61.403 66.667 0.00 0.00 37.22 4.95
109 110 2.446848 ATCCGACATCCAGCAGGGG 61.447 63.158 0.00 0.00 37.22 4.79
110 111 1.227764 CATCCGACATCCAGCAGGG 60.228 63.158 0.00 0.00 34.83 4.45
111 112 0.249784 CTCATCCGACATCCAGCAGG 60.250 60.000 0.00 0.00 0.00 4.85
112 113 0.249784 CCTCATCCGACATCCAGCAG 60.250 60.000 0.00 0.00 0.00 4.24
113 114 0.977627 ACCTCATCCGACATCCAGCA 60.978 55.000 0.00 0.00 0.00 4.41
114 115 0.249657 GACCTCATCCGACATCCAGC 60.250 60.000 0.00 0.00 0.00 4.85
115 116 0.031314 CGACCTCATCCGACATCCAG 59.969 60.000 0.00 0.00 0.00 3.86
116 117 0.683179 ACGACCTCATCCGACATCCA 60.683 55.000 0.00 0.00 0.00 3.41
117 118 0.249073 CACGACCTCATCCGACATCC 60.249 60.000 0.00 0.00 0.00 3.51
118 119 0.456221 ACACGACCTCATCCGACATC 59.544 55.000 0.00 0.00 0.00 3.06
119 120 0.895530 AACACGACCTCATCCGACAT 59.104 50.000 0.00 0.00 0.00 3.06
120 121 0.038618 CAACACGACCTCATCCGACA 60.039 55.000 0.00 0.00 0.00 4.35
121 122 0.736325 CCAACACGACCTCATCCGAC 60.736 60.000 0.00 0.00 0.00 4.79
122 123 0.896479 TCCAACACGACCTCATCCGA 60.896 55.000 0.00 0.00 0.00 4.55
123 124 0.458543 CTCCAACACGACCTCATCCG 60.459 60.000 0.00 0.00 0.00 4.18
124 125 0.608640 ACTCCAACACGACCTCATCC 59.391 55.000 0.00 0.00 0.00 3.51
125 126 1.714794 CACTCCAACACGACCTCATC 58.285 55.000 0.00 0.00 0.00 2.92
126 127 0.320771 GCACTCCAACACGACCTCAT 60.321 55.000 0.00 0.00 0.00 2.90
127 128 1.069090 GCACTCCAACACGACCTCA 59.931 57.895 0.00 0.00 0.00 3.86
128 129 0.667792 GAGCACTCCAACACGACCTC 60.668 60.000 0.00 0.00 0.00 3.85
129 130 1.367840 GAGCACTCCAACACGACCT 59.632 57.895 0.00 0.00 0.00 3.85
130 131 2.022129 CGAGCACTCCAACACGACC 61.022 63.158 0.00 0.00 0.00 4.79
131 132 2.658707 GCGAGCACTCCAACACGAC 61.659 63.158 0.00 0.00 0.00 4.34
132 133 2.355837 GCGAGCACTCCAACACGA 60.356 61.111 0.00 0.00 0.00 4.35
133 134 3.414700 GGCGAGCACTCCAACACG 61.415 66.667 0.00 0.00 0.00 4.49
134 135 2.029844 GAGGCGAGCACTCCAACAC 61.030 63.158 0.00 0.00 0.00 3.32
135 136 2.343758 GAGGCGAGCACTCCAACA 59.656 61.111 0.00 0.00 0.00 3.33
140 141 2.875684 GAAGACGGAGGCGAGCACTC 62.876 65.000 0.00 1.55 0.00 3.51
141 142 2.992114 AAGACGGAGGCGAGCACT 60.992 61.111 0.00 0.00 0.00 4.40
142 143 2.507324 GAAGACGGAGGCGAGCAC 60.507 66.667 0.00 0.00 0.00 4.40
143 144 2.989253 TGAAGACGGAGGCGAGCA 60.989 61.111 0.00 0.00 0.00 4.26
144 145 2.507324 GTGAAGACGGAGGCGAGC 60.507 66.667 0.00 0.00 0.00 5.03
145 146 2.202492 CGTGAAGACGGAGGCGAG 60.202 66.667 0.00 0.00 42.18 5.03
146 147 4.415332 GCGTGAAGACGGAGGCGA 62.415 66.667 0.00 0.00 46.20 5.54
163 164 1.380403 TTACATCATTTGCCCGGCGG 61.380 55.000 21.46 21.46 0.00 6.13
164 165 0.667993 ATTACATCATTTGCCCGGCG 59.332 50.000 4.58 0.00 0.00 6.46
165 166 1.680735 TCATTACATCATTTGCCCGGC 59.319 47.619 1.04 1.04 0.00 6.13
166 167 4.037803 TCATTCATTACATCATTTGCCCGG 59.962 41.667 0.00 0.00 0.00 5.73
167 168 5.185668 TCATTCATTACATCATTTGCCCG 57.814 39.130 0.00 0.00 0.00 6.13
168 169 6.987992 ACAATCATTCATTACATCATTTGCCC 59.012 34.615 0.00 0.00 0.00 5.36
169 170 9.701098 ATACAATCATTCATTACATCATTTGCC 57.299 29.630 0.00 0.00 0.00 4.52
210 211 9.387397 CCTTTTTAACCCCACCCATATATTAAT 57.613 33.333 0.00 0.00 0.00 1.40
211 212 8.352948 ACCTTTTTAACCCCACCCATATATTAA 58.647 33.333 0.00 0.00 0.00 1.40
212 213 7.895641 ACCTTTTTAACCCCACCCATATATTA 58.104 34.615 0.00 0.00 0.00 0.98
213 214 6.758366 ACCTTTTTAACCCCACCCATATATT 58.242 36.000 0.00 0.00 0.00 1.28
214 215 6.364172 ACCTTTTTAACCCCACCCATATAT 57.636 37.500 0.00 0.00 0.00 0.86
215 216 5.817483 ACCTTTTTAACCCCACCCATATA 57.183 39.130 0.00 0.00 0.00 0.86
216 217 4.703101 ACCTTTTTAACCCCACCCATAT 57.297 40.909 0.00 0.00 0.00 1.78
217 218 4.488914 AACCTTTTTAACCCCACCCATA 57.511 40.909 0.00 0.00 0.00 2.74
218 219 3.354233 AACCTTTTTAACCCCACCCAT 57.646 42.857 0.00 0.00 0.00 4.00
219 220 2.871007 AACCTTTTTAACCCCACCCA 57.129 45.000 0.00 0.00 0.00 4.51
220 221 4.084287 CTCTAACCTTTTTAACCCCACCC 58.916 47.826 0.00 0.00 0.00 4.61
221 222 4.733165 ACTCTAACCTTTTTAACCCCACC 58.267 43.478 0.00 0.00 0.00 4.61
222 223 6.720112 AAACTCTAACCTTTTTAACCCCAC 57.280 37.500 0.00 0.00 0.00 4.61
269 270 7.581213 TTCATTCTCAAGAACTAGGCAAAAA 57.419 32.000 0.00 0.00 36.80 1.94
270 271 7.581213 TTTCATTCTCAAGAACTAGGCAAAA 57.419 32.000 0.00 0.00 36.80 2.44
271 272 7.581213 TTTTCATTCTCAAGAACTAGGCAAA 57.419 32.000 0.00 0.00 36.80 3.68
272 273 7.765695 ATTTTCATTCTCAAGAACTAGGCAA 57.234 32.000 0.00 0.00 36.80 4.52
273 274 8.103305 AGTATTTTCATTCTCAAGAACTAGGCA 58.897 33.333 0.00 0.00 36.80 4.75
274 275 8.499403 AGTATTTTCATTCTCAAGAACTAGGC 57.501 34.615 0.00 0.00 36.80 3.93
305 306 6.633634 GGCAAAACAATCAACACAATGAATTG 59.366 34.615 1.45 1.45 43.26 2.32
306 307 6.543100 AGGCAAAACAATCAACACAATGAATT 59.457 30.769 0.00 0.00 32.06 2.17
307 308 6.056884 AGGCAAAACAATCAACACAATGAAT 58.943 32.000 0.00 0.00 32.06 2.57
308 309 5.426504 AGGCAAAACAATCAACACAATGAA 58.573 33.333 0.00 0.00 32.06 2.57
309 310 5.021033 AGGCAAAACAATCAACACAATGA 57.979 34.783 0.00 0.00 0.00 2.57
310 311 6.841443 TTAGGCAAAACAATCAACACAATG 57.159 33.333 0.00 0.00 0.00 2.82
311 312 7.520292 GCATTTAGGCAAAACAATCAACACAAT 60.520 33.333 0.00 0.00 0.00 2.71
312 313 6.238320 GCATTTAGGCAAAACAATCAACACAA 60.238 34.615 0.00 0.00 0.00 3.33
313 314 5.236047 GCATTTAGGCAAAACAATCAACACA 59.764 36.000 0.00 0.00 0.00 3.72
314 315 5.236047 TGCATTTAGGCAAAACAATCAACAC 59.764 36.000 0.00 0.00 41.65 3.32
315 316 5.363101 TGCATTTAGGCAAAACAATCAACA 58.637 33.333 0.00 0.00 41.65 3.33
316 317 5.921004 TGCATTTAGGCAAAACAATCAAC 57.079 34.783 0.00 0.00 41.65 3.18
328 329 2.951642 TGCCAAGAGTATGCATTTAGGC 59.048 45.455 3.54 11.03 39.95 3.93
329 330 4.202441 ACTGCCAAGAGTATGCATTTAGG 58.798 43.478 3.54 0.11 33.97 2.69
330 331 5.824904 AACTGCCAAGAGTATGCATTTAG 57.175 39.130 3.54 0.00 33.97 1.85
331 332 5.709631 TCAAACTGCCAAGAGTATGCATTTA 59.290 36.000 3.54 0.00 33.97 1.40
332 333 4.523943 TCAAACTGCCAAGAGTATGCATTT 59.476 37.500 3.54 0.00 33.97 2.32
333 334 4.081406 TCAAACTGCCAAGAGTATGCATT 58.919 39.130 3.54 0.00 33.97 3.56
334 335 3.689347 TCAAACTGCCAAGAGTATGCAT 58.311 40.909 3.79 3.79 33.97 3.96
335 336 3.138884 TCAAACTGCCAAGAGTATGCA 57.861 42.857 0.00 0.00 0.00 3.96
336 337 4.708726 AATCAAACTGCCAAGAGTATGC 57.291 40.909 0.00 0.00 0.00 3.14
337 338 6.449698 ACAAAATCAAACTGCCAAGAGTATG 58.550 36.000 0.00 0.00 0.00 2.39
338 339 6.655078 ACAAAATCAAACTGCCAAGAGTAT 57.345 33.333 0.00 0.00 0.00 2.12
339 340 6.096141 TCAACAAAATCAAACTGCCAAGAGTA 59.904 34.615 0.00 0.00 0.00 2.59
340 341 5.105392 TCAACAAAATCAAACTGCCAAGAGT 60.105 36.000 0.00 0.00 0.00 3.24
341 342 5.350633 TCAACAAAATCAAACTGCCAAGAG 58.649 37.500 0.00 0.00 0.00 2.85
342 343 5.336150 TCAACAAAATCAAACTGCCAAGA 57.664 34.783 0.00 0.00 0.00 3.02
343 344 6.037391 ACAATCAACAAAATCAAACTGCCAAG 59.963 34.615 0.00 0.00 0.00 3.61
344 345 5.879223 ACAATCAACAAAATCAAACTGCCAA 59.121 32.000 0.00 0.00 0.00 4.52
345 346 5.426504 ACAATCAACAAAATCAAACTGCCA 58.573 33.333 0.00 0.00 0.00 4.92
346 347 5.754890 AGACAATCAACAAAATCAAACTGCC 59.245 36.000 0.00 0.00 0.00 4.85
347 348 6.833342 AGACAATCAACAAAATCAAACTGC 57.167 33.333 0.00 0.00 0.00 4.40
364 365 8.893727 GCCACAGTTACAATCTAATAAGACAAT 58.106 33.333 0.00 0.00 33.57 2.71
365 366 8.100791 AGCCACAGTTACAATCTAATAAGACAA 58.899 33.333 0.00 0.00 33.57 3.18
366 367 7.620880 AGCCACAGTTACAATCTAATAAGACA 58.379 34.615 0.00 0.00 33.57 3.41
367 368 8.494016 AAGCCACAGTTACAATCTAATAAGAC 57.506 34.615 0.00 0.00 33.57 3.01
368 369 8.318412 TGAAGCCACAGTTACAATCTAATAAGA 58.682 33.333 0.00 0.00 35.80 2.10
369 370 8.492673 TGAAGCCACAGTTACAATCTAATAAG 57.507 34.615 0.00 0.00 0.00 1.73
370 371 8.856153 TTGAAGCCACAGTTACAATCTAATAA 57.144 30.769 0.00 0.00 0.00 1.40
371 372 9.461312 AATTGAAGCCACAGTTACAATCTAATA 57.539 29.630 0.00 0.00 0.00 0.98
372 373 7.944729 ATTGAAGCCACAGTTACAATCTAAT 57.055 32.000 0.00 0.00 0.00 1.73
373 374 7.759489 AATTGAAGCCACAGTTACAATCTAA 57.241 32.000 0.00 0.00 0.00 2.10
374 375 7.759489 AAATTGAAGCCACAGTTACAATCTA 57.241 32.000 0.00 0.00 0.00 1.98
375 376 6.655078 AAATTGAAGCCACAGTTACAATCT 57.345 33.333 0.00 0.00 0.00 2.40
376 377 7.224557 ACAAAAATTGAAGCCACAGTTACAATC 59.775 33.333 0.00 0.00 0.00 2.67
377 378 7.047271 ACAAAAATTGAAGCCACAGTTACAAT 58.953 30.769 0.00 0.00 0.00 2.71
378 379 6.402222 ACAAAAATTGAAGCCACAGTTACAA 58.598 32.000 0.00 0.00 0.00 2.41
379 380 5.971763 ACAAAAATTGAAGCCACAGTTACA 58.028 33.333 0.00 0.00 0.00 2.41
380 381 6.902224 AACAAAAATTGAAGCCACAGTTAC 57.098 33.333 0.00 0.00 0.00 2.50
381 382 7.327214 AGAAACAAAAATTGAAGCCACAGTTA 58.673 30.769 0.00 0.00 0.00 2.24
382 383 6.172630 AGAAACAAAAATTGAAGCCACAGTT 58.827 32.000 0.00 0.00 0.00 3.16
383 384 5.733676 AGAAACAAAAATTGAAGCCACAGT 58.266 33.333 0.00 0.00 0.00 3.55
384 385 6.667007 AAGAAACAAAAATTGAAGCCACAG 57.333 33.333 0.00 0.00 0.00 3.66
385 386 7.446001 AAAAGAAACAAAAATTGAAGCCACA 57.554 28.000 0.00 0.00 0.00 4.17
386 387 9.833182 TTTAAAAGAAACAAAAATTGAAGCCAC 57.167 25.926 0.00 0.00 0.00 5.01
396 397 8.666573 GGGACGGATTTTTAAAAGAAACAAAAA 58.333 29.630 0.14 0.00 36.06 1.94
397 398 8.199176 GGGACGGATTTTTAAAAGAAACAAAA 57.801 30.769 0.14 0.00 0.00 2.44
398 399 7.773864 GGGACGGATTTTTAAAAGAAACAAA 57.226 32.000 0.14 0.00 0.00 2.83
418 419 1.736126 GGAATTCGAGTTTTCCGGGAC 59.264 52.381 0.00 0.00 32.65 4.46
419 420 1.626825 AGGAATTCGAGTTTTCCGGGA 59.373 47.619 0.00 0.00 44.99 5.14
420 421 1.737793 CAGGAATTCGAGTTTTCCGGG 59.262 52.381 0.00 9.59 44.99 5.73
421 422 1.737793 CCAGGAATTCGAGTTTTCCGG 59.262 52.381 14.49 13.91 44.99 5.14
422 423 2.695359 TCCAGGAATTCGAGTTTTCCG 58.305 47.619 14.49 10.87 44.99 4.30
423 424 3.628032 GGATCCAGGAATTCGAGTTTTCC 59.372 47.826 6.95 13.22 41.46 3.13
424 425 3.309954 CGGATCCAGGAATTCGAGTTTTC 59.690 47.826 13.41 0.00 0.00 2.29
425 426 3.270877 CGGATCCAGGAATTCGAGTTTT 58.729 45.455 13.41 0.00 0.00 2.43
426 427 2.906354 CGGATCCAGGAATTCGAGTTT 58.094 47.619 13.41 0.00 0.00 2.66
427 428 1.473434 GCGGATCCAGGAATTCGAGTT 60.473 52.381 13.41 0.00 0.00 3.01
428 429 0.105039 GCGGATCCAGGAATTCGAGT 59.895 55.000 13.41 0.00 0.00 4.18
429 430 0.601311 GGCGGATCCAGGAATTCGAG 60.601 60.000 13.41 0.00 34.01 4.04
430 431 1.334384 TGGCGGATCCAGGAATTCGA 61.334 55.000 13.41 0.00 40.72 3.71
431 432 1.146041 TGGCGGATCCAGGAATTCG 59.854 57.895 13.41 0.00 40.72 3.34
439 440 0.616395 TCCTTACAGTGGCGGATCCA 60.616 55.000 13.41 0.00 44.18 3.41
440 441 0.539986 TTCCTTACAGTGGCGGATCC 59.460 55.000 0.00 0.00 0.00 3.36
441 442 2.007608 GTTTCCTTACAGTGGCGGATC 58.992 52.381 0.00 0.00 0.00 3.36
442 443 1.349688 TGTTTCCTTACAGTGGCGGAT 59.650 47.619 0.00 0.00 0.00 4.18
443 444 0.759959 TGTTTCCTTACAGTGGCGGA 59.240 50.000 0.00 0.00 0.00 5.54
444 445 0.872388 GTGTTTCCTTACAGTGGCGG 59.128 55.000 0.00 0.00 0.00 6.13
445 446 1.263217 GTGTGTTTCCTTACAGTGGCG 59.737 52.381 0.00 0.00 0.00 5.69
446 447 2.290641 CAGTGTGTTTCCTTACAGTGGC 59.709 50.000 0.00 0.00 41.99 5.01
449 450 4.755123 GCATACAGTGTGTTTCCTTACAGT 59.245 41.667 5.88 0.00 0.00 3.55
450 451 4.754618 TGCATACAGTGTGTTTCCTTACAG 59.245 41.667 5.88 0.00 0.00 2.74
451 452 4.513692 GTGCATACAGTGTGTTTCCTTACA 59.486 41.667 5.88 0.00 0.00 2.41
452 453 4.083484 GGTGCATACAGTGTGTTTCCTTAC 60.083 45.833 5.88 0.00 0.00 2.34
453 454 4.069304 GGTGCATACAGTGTGTTTCCTTA 58.931 43.478 5.88 0.00 0.00 2.69
454 455 2.884639 GGTGCATACAGTGTGTTTCCTT 59.115 45.455 5.88 0.00 0.00 3.36
455 456 2.504367 GGTGCATACAGTGTGTTTCCT 58.496 47.619 5.88 0.00 0.00 3.36
456 457 1.539827 GGGTGCATACAGTGTGTTTCC 59.460 52.381 5.88 1.49 0.00 3.13
457 458 1.196808 CGGGTGCATACAGTGTGTTTC 59.803 52.381 5.88 0.00 0.00 2.78
493 494 1.151668 GTGCTAATAGCGCCTCATGG 58.848 55.000 14.40 0.00 46.26 3.66
502 503 0.868406 GGTGCGATGGTGCTAATAGC 59.132 55.000 5.12 5.12 42.82 2.97
509 510 3.503363 GAGCTGGTGCGATGGTGC 61.503 66.667 0.00 0.00 45.42 5.01
516 517 1.081641 CTTTTGCTGAGCTGGTGCG 60.082 57.895 5.83 0.00 45.42 5.34
587 588 2.107552 ACATCGGAGAAACCCCTTTTCA 59.892 45.455 0.00 0.00 45.50 2.69
602 604 2.096496 CCTGCAAGAGCTTTAACATCGG 59.904 50.000 0.00 0.00 42.74 4.18
603 605 2.096496 CCCTGCAAGAGCTTTAACATCG 59.904 50.000 0.00 0.00 42.74 3.84
639 641 0.320073 TGGTCCTTTTACGACTGCCG 60.320 55.000 0.00 0.00 45.44 5.69
647 649 7.519809 GCCAATGTTTCATTTTGGTCCTTTTAC 60.520 37.037 3.16 0.00 41.58 2.01
660 662 2.302733 GGGTTCCTGCCAATGTTTCATT 59.697 45.455 0.00 0.00 0.00 2.57
758 760 1.121407 TAGGGGGCCATCACTCATCG 61.121 60.000 4.39 0.00 0.00 3.84
841 847 1.933853 GCTTGCGAGATTCGTTGGTAT 59.066 47.619 4.70 0.00 42.81 2.73
842 848 1.355971 GCTTGCGAGATTCGTTGGTA 58.644 50.000 4.70 0.00 42.81 3.25
908 918 1.138266 GCTAGCTATTGGGTCGTTGGA 59.862 52.381 7.70 0.00 0.00 3.53
935 945 1.422402 ACCGTATGGGGTGTTTGTTCT 59.578 47.619 5.82 0.00 39.34 3.01
940 950 0.038599 GGGAACCGTATGGGGTGTTT 59.961 55.000 5.82 0.00 41.08 2.83
954 965 3.056328 GCCTTGAGCCGTGGGAAC 61.056 66.667 0.00 0.00 34.35 3.62
995 1006 2.440065 GCGATTCCACCATGGGCA 60.440 61.111 18.09 0.00 38.32 5.36
996 1007 3.219198 GGCGATTCCACCATGGGC 61.219 66.667 18.09 7.55 38.32 5.36
1063 1089 2.106332 CGTACCTGGATCACCGCC 59.894 66.667 0.00 0.00 39.42 6.13
1082 1112 3.054878 CAACAAAGCAAGAACTGGATGC 58.945 45.455 0.00 0.00 40.34 3.91
1106 1136 7.549134 TGAAGAACCATTCACATACTACATGTC 59.451 37.037 0.00 0.00 34.31 3.06
1132 1164 2.530701 ACTCAATCACCTTCCTCGACT 58.469 47.619 0.00 0.00 0.00 4.18
1180 1215 1.826921 CATCCCACTGGAGCCATGC 60.827 63.158 0.00 0.00 46.08 4.06
1191 1232 0.886490 GACCATGATCGGCATCCCAC 60.886 60.000 0.00 0.00 34.15 4.61
1276 1317 4.681978 GGGAGCTCACCGTTGCGT 62.682 66.667 17.19 0.00 0.00 5.24
1290 1331 4.131596 GCAACTACAAACACAAGTAGGGA 58.868 43.478 0.00 0.00 41.49 4.20
1292 1333 4.334203 TGTGCAACTACAAACACAAGTAGG 59.666 41.667 0.00 0.00 41.49 3.18
1295 1336 4.775058 TTGTGCAACTACAAACACAAGT 57.225 36.364 3.47 0.00 45.35 3.16
1298 1339 5.065704 ACAATTGTGCAACTACAAACACA 57.934 34.783 11.07 0.00 43.13 3.72
1299 1340 6.262601 AGTACAATTGTGCAACTACAAACAC 58.737 36.000 25.60 9.76 43.13 3.32
1300 1341 6.443934 AGTACAATTGTGCAACTACAAACA 57.556 33.333 25.60 0.00 43.13 2.83
1301 1342 7.636326 ACTAGTACAATTGTGCAACTACAAAC 58.364 34.615 25.60 10.42 43.13 2.93
1302 1343 7.795482 ACTAGTACAATTGTGCAACTACAAA 57.205 32.000 25.60 5.06 43.13 2.83
1303 1344 7.254966 CCAACTAGTACAATTGTGCAACTACAA 60.255 37.037 25.60 5.37 43.93 2.41
1304 1345 6.203915 CCAACTAGTACAATTGTGCAACTACA 59.796 38.462 25.60 5.99 38.04 2.74
1305 1346 6.348213 CCCAACTAGTACAATTGTGCAACTAC 60.348 42.308 25.60 13.09 38.04 2.73
1309 1350 3.254657 GCCCAACTAGTACAATTGTGCAA 59.745 43.478 25.60 8.56 32.87 4.08
1312 1353 3.071479 ACGCCCAACTAGTACAATTGTG 58.929 45.455 21.42 6.72 0.00 3.33
1313 1354 3.071479 CACGCCCAACTAGTACAATTGT 58.929 45.455 16.68 16.68 0.00 2.71
1340 1381 5.008811 AGCCAATTCTACTAGTAGCACTACG 59.991 44.000 22.87 10.55 40.80 3.51
1346 1390 5.715434 AGCTAGCCAATTCTACTAGTAGC 57.285 43.478 22.87 12.36 36.57 3.58
1407 1452 1.498576 TCAGCCTCTCTAGATGAGCCT 59.501 52.381 11.58 5.63 42.38 4.58
1864 1928 4.580580 GCACCAAGAAAGAGAAGAGGAAAA 59.419 41.667 0.00 0.00 0.00 2.29
1952 2016 1.481363 GAGGCCCCTAATATCTACCGC 59.519 57.143 0.00 0.00 0.00 5.68
1953 2017 3.103080 AGAGGCCCCTAATATCTACCG 57.897 52.381 0.00 0.00 0.00 4.02
1956 2020 6.792473 TGAATCAAAGAGGCCCCTAATATCTA 59.208 38.462 0.00 0.00 0.00 1.98
1957 2021 5.612688 TGAATCAAAGAGGCCCCTAATATCT 59.387 40.000 0.00 0.00 0.00 1.98
1958 2022 5.880901 TGAATCAAAGAGGCCCCTAATATC 58.119 41.667 0.00 0.00 0.00 1.63
1960 2024 5.725551 TTGAATCAAAGAGGCCCCTAATA 57.274 39.130 0.00 0.00 0.00 0.98
1962 2026 4.396357 TTTGAATCAAAGAGGCCCCTAA 57.604 40.909 4.03 0.00 0.00 2.69
1964 2028 2.999185 TTTGAATCAAAGAGGCCCCT 57.001 45.000 4.03 0.00 0.00 4.79
1999 2063 8.694581 TTCCTAAAGGTTCGAATCCTTAAAAA 57.305 30.769 23.46 15.77 43.50 1.94
2000 2064 8.873186 ATTCCTAAAGGTTCGAATCCTTAAAA 57.127 30.769 23.46 17.24 43.50 1.52
2001 2065 8.873186 AATTCCTAAAGGTTCGAATCCTTAAA 57.127 30.769 23.46 17.46 43.50 1.52
2002 2066 8.873186 AAATTCCTAAAGGTTCGAATCCTTAA 57.127 30.769 23.46 17.12 43.50 1.85
2003 2067 8.873186 AAAATTCCTAAAGGTTCGAATCCTTA 57.127 30.769 23.46 13.72 43.50 2.69
2004 2068 7.776618 AAAATTCCTAAAGGTTCGAATCCTT 57.223 32.000 19.84 19.84 45.84 3.36
2005 2069 7.093902 GGAAAAATTCCTAAAGGTTCGAATCCT 60.094 37.037 4.40 9.01 46.57 3.24
2006 2070 7.033791 GGAAAAATTCCTAAAGGTTCGAATCC 58.966 38.462 4.40 6.73 46.57 3.01
2022 2086 5.861222 AACAATCAATGCGGGAAAAATTC 57.139 34.783 0.00 0.00 0.00 2.17
2023 2087 5.762218 TCAAACAATCAATGCGGGAAAAATT 59.238 32.000 0.00 0.00 0.00 1.82
2024 2088 5.303971 TCAAACAATCAATGCGGGAAAAAT 58.696 33.333 0.00 0.00 0.00 1.82
2025 2089 4.697514 TCAAACAATCAATGCGGGAAAAA 58.302 34.783 0.00 0.00 0.00 1.94
2026 2090 4.327982 TCAAACAATCAATGCGGGAAAA 57.672 36.364 0.00 0.00 0.00 2.29
2027 2091 4.533919 ATCAAACAATCAATGCGGGAAA 57.466 36.364 0.00 0.00 0.00 3.13
2028 2092 4.021632 TGAATCAAACAATCAATGCGGGAA 60.022 37.500 0.00 0.00 0.00 3.97
2029 2093 3.509184 TGAATCAAACAATCAATGCGGGA 59.491 39.130 0.00 0.00 0.00 5.14
2030 2094 3.613737 GTGAATCAAACAATCAATGCGGG 59.386 43.478 0.00 0.00 0.00 6.13
2031 2095 4.236147 TGTGAATCAAACAATCAATGCGG 58.764 39.130 0.00 0.00 0.00 5.69
2032 2096 4.325204 CCTGTGAATCAAACAATCAATGCG 59.675 41.667 0.00 0.00 0.00 4.73
2033 2097 5.472148 TCCTGTGAATCAAACAATCAATGC 58.528 37.500 0.00 0.00 0.00 3.56
2034 2098 7.815549 TCAATCCTGTGAATCAAACAATCAATG 59.184 33.333 0.00 0.00 0.00 2.82
2035 2099 7.898918 TCAATCCTGTGAATCAAACAATCAAT 58.101 30.769 0.00 0.00 0.00 2.57
2036 2100 7.287512 TCAATCCTGTGAATCAAACAATCAA 57.712 32.000 0.00 0.00 0.00 2.57
2037 2101 6.897706 TCAATCCTGTGAATCAAACAATCA 57.102 33.333 0.00 0.00 0.00 2.57
2073 2137 9.921637 GTAGTACAAATGAATCCATTGGAAAAA 57.078 29.630 9.98 0.00 41.84 1.94
2074 2138 9.083422 TGTAGTACAAATGAATCCATTGGAAAA 57.917 29.630 9.98 0.00 41.84 2.29
2075 2139 8.642935 TGTAGTACAAATGAATCCATTGGAAA 57.357 30.769 9.98 0.00 41.84 3.13
2076 2140 8.821686 ATGTAGTACAAATGAATCCATTGGAA 57.178 30.769 9.98 0.00 41.84 3.53
2077 2141 8.821686 AATGTAGTACAAATGAATCCATTGGA 57.178 30.769 8.08 8.08 41.84 3.53
2078 2142 9.520204 GAAATGTAGTACAAATGAATCCATTGG 57.480 33.333 7.16 0.00 41.84 3.16
2090 2154 9.967451 TGGAATTCCTATGAAATGTAGTACAAA 57.033 29.630 24.73 0.00 36.82 2.83
2091 2155 9.613428 CTGGAATTCCTATGAAATGTAGTACAA 57.387 33.333 24.73 0.00 36.82 2.41
2092 2156 7.715249 GCTGGAATTCCTATGAAATGTAGTACA 59.285 37.037 24.73 5.24 36.82 2.90
2093 2157 7.715249 TGCTGGAATTCCTATGAAATGTAGTAC 59.285 37.037 24.73 0.00 36.82 2.73
2094 2158 7.801104 TGCTGGAATTCCTATGAAATGTAGTA 58.199 34.615 24.73 6.90 36.82 1.82
2095 2159 6.662755 TGCTGGAATTCCTATGAAATGTAGT 58.337 36.000 24.73 0.00 36.82 2.73
2096 2160 7.094463 GGATGCTGGAATTCCTATGAAATGTAG 60.094 40.741 24.73 10.84 36.82 2.74
2097 2161 6.716628 GGATGCTGGAATTCCTATGAAATGTA 59.283 38.462 24.73 0.00 36.82 2.29
2098 2162 5.537674 GGATGCTGGAATTCCTATGAAATGT 59.462 40.000 24.73 2.25 36.82 2.71
2099 2163 5.537295 TGGATGCTGGAATTCCTATGAAATG 59.463 40.000 24.73 6.52 36.82 2.32
2100 2164 5.537674 GTGGATGCTGGAATTCCTATGAAAT 59.462 40.000 24.73 10.04 36.82 2.17
2101 2165 4.889409 GTGGATGCTGGAATTCCTATGAAA 59.111 41.667 24.73 2.90 36.82 2.69
2102 2166 4.166725 AGTGGATGCTGGAATTCCTATGAA 59.833 41.667 24.73 10.44 36.82 2.57
2103 2167 3.718434 AGTGGATGCTGGAATTCCTATGA 59.282 43.478 24.73 4.04 36.82 2.15
2104 2168 4.070716 GAGTGGATGCTGGAATTCCTATG 58.929 47.826 24.73 15.34 36.82 2.23
2105 2169 3.073650 GGAGTGGATGCTGGAATTCCTAT 59.926 47.826 24.73 15.82 36.82 2.57
2106 2170 2.439507 GGAGTGGATGCTGGAATTCCTA 59.560 50.000 24.73 11.90 36.82 2.94
2107 2171 1.213926 GGAGTGGATGCTGGAATTCCT 59.786 52.381 24.73 4.76 36.82 3.36
2108 2172 1.064463 TGGAGTGGATGCTGGAATTCC 60.064 52.381 18.17 18.17 0.00 3.01
2109 2173 2.424956 GTTGGAGTGGATGCTGGAATTC 59.575 50.000 0.00 0.00 0.00 2.17
2110 2174 2.450476 GTTGGAGTGGATGCTGGAATT 58.550 47.619 0.00 0.00 0.00 2.17
2111 2175 1.341383 GGTTGGAGTGGATGCTGGAAT 60.341 52.381 0.00 0.00 0.00 3.01
2112 2176 0.038166 GGTTGGAGTGGATGCTGGAA 59.962 55.000 0.00 0.00 0.00 3.53
2113 2177 0.842030 AGGTTGGAGTGGATGCTGGA 60.842 55.000 0.00 0.00 0.00 3.86
2114 2178 0.393537 GAGGTTGGAGTGGATGCTGG 60.394 60.000 0.00 0.00 0.00 4.85
2115 2179 0.617413 AGAGGTTGGAGTGGATGCTG 59.383 55.000 0.00 0.00 0.00 4.41
2116 2180 1.004044 CAAGAGGTTGGAGTGGATGCT 59.996 52.381 0.00 0.00 0.00 3.79
2117 2181 1.003580 TCAAGAGGTTGGAGTGGATGC 59.996 52.381 0.00 0.00 34.09 3.91
2118 2182 3.423539 TTCAAGAGGTTGGAGTGGATG 57.576 47.619 0.00 0.00 34.09 3.51
2119 2183 3.652869 TCTTTCAAGAGGTTGGAGTGGAT 59.347 43.478 0.00 0.00 34.09 3.41
2120 2184 3.045634 TCTTTCAAGAGGTTGGAGTGGA 58.954 45.455 0.00 0.00 34.09 4.02
2121 2185 3.492102 TCTTTCAAGAGGTTGGAGTGG 57.508 47.619 0.00 0.00 34.09 4.00
2122 2186 6.264067 AGAATTTCTTTCAAGAGGTTGGAGTG 59.736 38.462 0.00 0.00 36.75 3.51
2123 2187 6.368805 AGAATTTCTTTCAAGAGGTTGGAGT 58.631 36.000 0.00 0.00 36.75 3.85
2124 2188 6.890979 AGAATTTCTTTCAAGAGGTTGGAG 57.109 37.500 0.00 0.00 36.75 3.86
2125 2189 7.124147 ACAAAGAATTTCTTTCAAGAGGTTGGA 59.876 33.333 19.13 0.00 42.60 3.53
2126 2190 7.267857 ACAAAGAATTTCTTTCAAGAGGTTGG 58.732 34.615 19.13 8.59 42.60 3.77
2127 2191 8.707938 AACAAAGAATTTCTTTCAAGAGGTTG 57.292 30.769 19.13 9.86 42.60 3.77
2128 2192 9.725019 AAAACAAAGAATTTCTTTCAAGAGGTT 57.275 25.926 19.13 15.73 42.60 3.50
2129 2193 9.725019 AAAAACAAAGAATTTCTTTCAAGAGGT 57.275 25.926 19.13 11.49 42.60 3.85
2132 2196 9.942850 AGGAAAAACAAAGAATTTCTTTCAAGA 57.057 25.926 19.13 0.00 42.60 3.02
2154 2218 9.513906 TGAGTTTGTTTGATTGTATCATAGGAA 57.486 29.630 0.00 0.00 39.39 3.36
2155 2219 9.513906 TTGAGTTTGTTTGATTGTATCATAGGA 57.486 29.630 0.00 0.00 39.39 2.94
2159 2223 9.643693 GGATTTGAGTTTGTTTGATTGTATCAT 57.356 29.630 0.00 0.00 39.39 2.45
2160 2224 8.859090 AGGATTTGAGTTTGTTTGATTGTATCA 58.141 29.630 0.00 0.00 37.55 2.15
2171 2235 9.753674 TGGATTTCTATAGGATTTGAGTTTGTT 57.246 29.630 0.00 0.00 0.00 2.83
2172 2236 9.753674 TTGGATTTCTATAGGATTTGAGTTTGT 57.246 29.630 0.00 0.00 0.00 2.83
2175 2239 9.927081 ACATTGGATTTCTATAGGATTTGAGTT 57.073 29.630 0.00 0.00 0.00 3.01
2176 2240 9.347240 CACATTGGATTTCTATAGGATTTGAGT 57.653 33.333 0.00 0.00 0.00 3.41
2177 2241 8.295288 GCACATTGGATTTCTATAGGATTTGAG 58.705 37.037 0.00 0.00 0.00 3.02
2178 2242 7.779326 TGCACATTGGATTTCTATAGGATTTGA 59.221 33.333 0.00 0.00 0.00 2.69
2179 2243 7.944061 TGCACATTGGATTTCTATAGGATTTG 58.056 34.615 0.00 0.00 0.00 2.32
2180 2244 8.582437 CATGCACATTGGATTTCTATAGGATTT 58.418 33.333 0.00 0.00 0.00 2.17
2181 2245 7.727186 ACATGCACATTGGATTTCTATAGGATT 59.273 33.333 0.00 0.00 0.00 3.01
2182 2246 7.236529 ACATGCACATTGGATTTCTATAGGAT 58.763 34.615 0.00 0.00 0.00 3.24
2183 2247 6.604171 ACATGCACATTGGATTTCTATAGGA 58.396 36.000 0.00 0.00 0.00 2.94
2184 2248 6.487668 TGACATGCACATTGGATTTCTATAGG 59.512 38.462 0.00 0.00 28.21 2.57
2185 2249 7.500720 TGACATGCACATTGGATTTCTATAG 57.499 36.000 0.00 0.00 28.21 1.31
2186 2250 8.467963 AATGACATGCACATTGGATTTCTATA 57.532 30.769 14.93 0.00 36.74 1.31
2187 2251 6.971726 ATGACATGCACATTGGATTTCTAT 57.028 33.333 0.00 0.00 28.21 1.98
2188 2252 6.778834 AATGACATGCACATTGGATTTCTA 57.221 33.333 14.93 0.00 36.74 2.10
2189 2253 5.670792 AATGACATGCACATTGGATTTCT 57.329 34.783 14.93 0.00 36.74 2.52
2190 2254 5.870433 TGAAATGACATGCACATTGGATTTC 59.130 36.000 15.96 13.45 37.89 2.17
2191 2255 5.795972 TGAAATGACATGCACATTGGATTT 58.204 33.333 15.96 1.07 37.89 2.17
2192 2256 5.408880 TGAAATGACATGCACATTGGATT 57.591 34.783 15.96 4.42 37.89 3.01
2193 2257 5.408880 TTGAAATGACATGCACATTGGAT 57.591 34.783 15.96 4.70 37.89 3.41
2194 2258 4.868314 TTGAAATGACATGCACATTGGA 57.132 36.364 15.96 6.47 37.89 3.53
2195 2259 4.569162 GGATTGAAATGACATGCACATTGG 59.431 41.667 15.96 0.00 37.89 3.16
2196 2260 5.416083 AGGATTGAAATGACATGCACATTG 58.584 37.500 15.96 0.00 37.89 2.82
2197 2261 5.670792 AGGATTGAAATGACATGCACATT 57.329 34.783 11.34 11.34 39.25 2.71
2198 2262 5.653330 TGTAGGATTGAAATGACATGCACAT 59.347 36.000 0.00 0.00 0.00 3.21
2199 2263 5.008980 TGTAGGATTGAAATGACATGCACA 58.991 37.500 0.00 0.00 0.00 4.57
2200 2264 5.565592 TGTAGGATTGAAATGACATGCAC 57.434 39.130 0.00 0.00 0.00 4.57
2201 2265 6.778834 AATGTAGGATTGAAATGACATGCA 57.221 33.333 0.00 0.00 0.00 3.96
2202 2266 8.483307 AAAAATGTAGGATTGAAATGACATGC 57.517 30.769 0.00 0.00 0.00 4.06
2203 2267 9.090692 GGAAAAATGTAGGATTGAAATGACATG 57.909 33.333 0.00 0.00 0.00 3.21
2204 2268 9.039165 AGGAAAAATGTAGGATTGAAATGACAT 57.961 29.630 0.00 0.00 0.00 3.06
2205 2269 8.421249 AGGAAAAATGTAGGATTGAAATGACA 57.579 30.769 0.00 0.00 0.00 3.58
2212 2276 9.699410 ACATGAATAGGAAAAATGTAGGATTGA 57.301 29.630 0.00 0.00 29.93 2.57
2213 2277 9.740239 CACATGAATAGGAAAAATGTAGGATTG 57.260 33.333 0.00 0.00 30.55 2.67
2214 2278 9.479549 ACACATGAATAGGAAAAATGTAGGATT 57.520 29.630 0.00 0.00 30.55 3.01
2215 2279 9.479549 AACACATGAATAGGAAAAATGTAGGAT 57.520 29.630 0.00 0.00 30.55 3.24
2216 2280 8.877864 AACACATGAATAGGAAAAATGTAGGA 57.122 30.769 0.00 0.00 30.55 2.94
2217 2281 9.927668 AAAACACATGAATAGGAAAAATGTAGG 57.072 29.630 0.00 0.00 30.55 3.18
2220 2284 8.558700 GCAAAAACACATGAATAGGAAAAATGT 58.441 29.630 0.00 0.00 31.79 2.71
2221 2285 8.557864 TGCAAAAACACATGAATAGGAAAAATG 58.442 29.630 0.00 0.00 0.00 2.32
2222 2286 8.674263 TGCAAAAACACATGAATAGGAAAAAT 57.326 26.923 0.00 0.00 0.00 1.82
2223 2287 8.498054 TTGCAAAAACACATGAATAGGAAAAA 57.502 26.923 0.00 0.00 0.00 1.94
2224 2288 8.674263 ATTGCAAAAACACATGAATAGGAAAA 57.326 26.923 1.71 0.00 0.00 2.29
2225 2289 7.387397 GGATTGCAAAAACACATGAATAGGAAA 59.613 33.333 1.71 0.00 0.00 3.13
2226 2290 6.873076 GGATTGCAAAAACACATGAATAGGAA 59.127 34.615 1.71 0.00 0.00 3.36
2227 2291 6.211184 AGGATTGCAAAAACACATGAATAGGA 59.789 34.615 1.71 0.00 0.00 2.94
2228 2292 6.311935 CAGGATTGCAAAAACACATGAATAGG 59.688 38.462 1.71 0.00 0.00 2.57
2229 2293 7.285783 CAGGATTGCAAAAACACATGAATAG 57.714 36.000 1.71 0.00 0.00 1.73
2246 2310 2.223433 GCCTCTTTGATTCGCAGGATTG 60.223 50.000 0.00 0.00 0.00 2.67
2247 2311 2.019984 GCCTCTTTGATTCGCAGGATT 58.980 47.619 0.00 0.00 0.00 3.01
2249 2313 0.392998 GGCCTCTTTGATTCGCAGGA 60.393 55.000 0.00 0.00 0.00 3.86
2251 2320 0.393537 AGGGCCTCTTTGATTCGCAG 60.394 55.000 0.00 0.00 0.00 5.18
2254 2323 1.486726 ACCTAGGGCCTCTTTGATTCG 59.513 52.381 10.74 0.00 0.00 3.34
2255 2324 2.239907 ACACCTAGGGCCTCTTTGATTC 59.760 50.000 10.74 0.00 0.00 2.52
2258 2327 0.984230 CACACCTAGGGCCTCTTTGA 59.016 55.000 10.74 0.00 0.00 2.69
2259 2328 0.035056 CCACACCTAGGGCCTCTTTG 60.035 60.000 10.74 8.08 0.00 2.77
2266 2335 2.507407 TCAATTTCCACACCTAGGGC 57.493 50.000 14.81 0.00 0.00 5.19
2267 2336 3.701040 CCAATCAATTTCCACACCTAGGG 59.299 47.826 14.81 4.64 0.00 3.53
2269 2338 4.344104 ACCCAATCAATTTCCACACCTAG 58.656 43.478 0.00 0.00 0.00 3.02
2280 2349 5.997129 GTCACCAAATCAAACCCAATCAATT 59.003 36.000 0.00 0.00 0.00 2.32
2595 2889 4.021719 CCTGATGAGTTGCACAATTTTCCT 60.022 41.667 0.00 0.00 0.00 3.36
2601 2895 1.913778 TGCCTGATGAGTTGCACAAT 58.086 45.000 0.00 0.00 0.00 2.71
2610 2906 2.354259 GTCTTTCTGGTGCCTGATGAG 58.646 52.381 0.00 1.90 0.00 2.90
2619 2915 2.664851 TGCGCCGTCTTTCTGGTG 60.665 61.111 4.18 0.00 38.79 4.17
2643 2939 0.986527 TGCTCTGCCTCATCTTCCAA 59.013 50.000 0.00 0.00 0.00 3.53
2763 3059 4.226394 TCGGAGATCTTGGGGTTCATTTTA 59.774 41.667 0.00 0.00 0.00 1.52
2766 3062 2.092914 GTCGGAGATCTTGGGGTTCATT 60.093 50.000 0.00 0.00 40.67 2.57
2830 3126 3.343421 GACGTGGCCGGTGTTGAC 61.343 66.667 1.90 0.00 38.78 3.18
2868 3164 1.177401 GGCCTGAAGAACATTGGGTC 58.823 55.000 0.00 0.00 0.00 4.46
2870 3166 0.609131 ACGGCCTGAAGAACATTGGG 60.609 55.000 0.00 0.00 0.00 4.12
2871 3167 0.523072 CACGGCCTGAAGAACATTGG 59.477 55.000 0.00 0.00 0.00 3.16
2873 3169 1.202758 TCACACGGCCTGAAGAACATT 60.203 47.619 0.00 0.00 0.00 2.71
3103 3421 3.413846 TGGATGGAGAGCTATGCAATC 57.586 47.619 6.65 5.30 30.73 2.67
3111 3429 3.474600 CGATTTTCATGGATGGAGAGCT 58.525 45.455 0.00 0.00 0.00 4.09
3121 3439 4.201647 GCATTTTGTGAGCGATTTTCATGG 60.202 41.667 0.00 0.00 0.00 3.66
3122 3440 4.386350 TGCATTTTGTGAGCGATTTTCATG 59.614 37.500 0.00 0.00 0.00 3.07
3123 3441 4.558178 TGCATTTTGTGAGCGATTTTCAT 58.442 34.783 0.00 0.00 0.00 2.57
3124 3442 3.974912 TGCATTTTGTGAGCGATTTTCA 58.025 36.364 0.00 0.00 0.00 2.69
3138 3456 5.049129 CGAGAAGGAGAAAACTCTGCATTTT 60.049 40.000 0.00 0.00 31.96 1.82
3183 3517 3.445687 CCATGCCTGCACGCACAT 61.446 61.111 12.71 0.00 42.70 3.21
3413 3747 3.387947 GCCGGGGACTTCTTCGGA 61.388 66.667 2.18 0.00 44.69 4.55
3453 3787 1.367599 GACGTCGTCTCGGACCTCAT 61.368 60.000 18.09 0.00 33.30 2.90
3566 3905 3.374988 GCATCACCACGAATCTCATCAAA 59.625 43.478 0.00 0.00 0.00 2.69
3695 4035 6.902224 AAGAATGGAAAAGAAAAACCAACG 57.098 33.333 0.00 0.00 36.00 4.10
3700 4040 7.538303 TGCTGAAAGAATGGAAAAGAAAAAC 57.462 32.000 0.00 0.00 34.07 2.43
3706 4048 4.922103 GCTCTTGCTGAAAGAATGGAAAAG 59.078 41.667 0.00 0.00 44.38 2.27
3710 4052 3.144657 TGCTCTTGCTGAAAGAATGGA 57.855 42.857 0.00 0.00 44.38 3.41
3711 4053 3.572584 GTTGCTCTTGCTGAAAGAATGG 58.427 45.455 0.00 0.00 44.38 3.16
3733 4075 0.034896 AGATATTTACAGGGCGCCCG 59.965 55.000 38.88 32.87 41.95 6.13
3801 4143 6.649141 GCCCGTTATCTTTTCATTTTCCTTTT 59.351 34.615 0.00 0.00 0.00 2.27
3842 4185 2.174107 CATGTCACGGTGCGCAAG 59.826 61.111 14.00 12.72 43.44 4.01
3844 4187 4.306967 TCCATGTCACGGTGCGCA 62.307 61.111 5.66 5.66 0.00 6.09
3957 4301 1.032014 TTCCTTTCAGCAGCACCAAC 58.968 50.000 0.00 0.00 0.00 3.77
3958 4302 1.032014 GTTCCTTTCAGCAGCACCAA 58.968 50.000 0.00 0.00 0.00 3.67
3965 4309 2.426738 CAGGTGTTTGTTCCTTTCAGCA 59.573 45.455 0.00 0.00 30.91 4.41
4012 4357 2.295472 GATGCTGCTCGCCTCTCTGT 62.295 60.000 0.00 0.00 38.05 3.41
4044 4389 1.406069 CGTGGGAGATCAAGTCCAAGG 60.406 57.143 0.00 0.00 35.57 3.61
4046 4391 1.550524 CTCGTGGGAGATCAAGTCCAA 59.449 52.381 0.00 0.00 43.27 3.53
4050 4395 1.187087 GACCTCGTGGGAGATCAAGT 58.813 55.000 8.63 0.00 43.27 3.16
4126 4471 7.279758 CCAGTCTAGCCGTATATTACTACTACC 59.720 44.444 0.00 0.00 0.00 3.18
4127 4472 7.821846 ACCAGTCTAGCCGTATATTACTACTAC 59.178 40.741 0.00 0.00 0.00 2.73
4129 4474 6.777782 ACCAGTCTAGCCGTATATTACTACT 58.222 40.000 0.00 0.00 0.00 2.57
4136 4481 6.617782 TCTACTACCAGTCTAGCCGTATAT 57.382 41.667 0.00 0.00 0.00 0.86
4137 4482 6.183361 TGTTCTACTACCAGTCTAGCCGTATA 60.183 42.308 0.00 0.00 0.00 1.47
4142 4487 3.065095 CGTGTTCTACTACCAGTCTAGCC 59.935 52.174 0.00 0.00 0.00 3.93
4146 4491 5.392811 GCAATACGTGTTCTACTACCAGTCT 60.393 44.000 0.00 0.00 0.00 3.24
4151 4496 5.035443 CAGAGCAATACGTGTTCTACTACC 58.965 45.833 0.00 0.00 45.24 3.18
4156 4501 3.868757 AGCAGAGCAATACGTGTTCTA 57.131 42.857 0.00 0.00 45.24 2.10
4160 4505 2.224079 CACAAAGCAGAGCAATACGTGT 59.776 45.455 0.00 0.00 0.00 4.49
4161 4506 2.224079 ACACAAAGCAGAGCAATACGTG 59.776 45.455 0.00 0.00 0.00 4.49
4162 4507 2.494059 ACACAAAGCAGAGCAATACGT 58.506 42.857 0.00 0.00 0.00 3.57
4163 4508 3.058983 TCAACACAAAGCAGAGCAATACG 60.059 43.478 0.00 0.00 0.00 3.06
4164 4509 4.470462 CTCAACACAAAGCAGAGCAATAC 58.530 43.478 0.00 0.00 0.00 1.89
4169 4514 3.468780 GCTCAACACAAAGCAGAGC 57.531 52.632 0.00 0.00 43.95 4.09
4222 4567 1.291637 AGGCCAATCCAATCCAATCCA 59.708 47.619 5.01 0.00 37.29 3.41
4223 4568 1.966354 GAGGCCAATCCAATCCAATCC 59.034 52.381 5.01 0.00 37.29 3.01
4224 4569 1.610522 CGAGGCCAATCCAATCCAATC 59.389 52.381 5.01 0.00 37.29 2.67
4225 4570 1.215173 TCGAGGCCAATCCAATCCAAT 59.785 47.619 5.01 0.00 37.29 3.16
4226 4571 0.623194 TCGAGGCCAATCCAATCCAA 59.377 50.000 5.01 0.00 37.29 3.53
4227 4572 0.107214 GTCGAGGCCAATCCAATCCA 60.107 55.000 5.01 0.00 37.29 3.41
4228 4573 1.160329 CGTCGAGGCCAATCCAATCC 61.160 60.000 5.01 0.00 37.29 3.01
4229 4574 1.160329 CCGTCGAGGCCAATCCAATC 61.160 60.000 5.01 0.00 37.29 2.67
4230 4575 1.153168 CCGTCGAGGCCAATCCAAT 60.153 57.895 5.01 0.00 37.29 3.16
4231 4576 2.267642 CCGTCGAGGCCAATCCAA 59.732 61.111 5.01 0.00 37.29 3.53
4393 4777 0.681733 ATGGCACTCACTCACGACTT 59.318 50.000 0.00 0.00 0.00 3.01
4398 4782 1.195448 CAAACGATGGCACTCACTCAC 59.805 52.381 0.00 0.00 0.00 3.51
4399 4783 1.511850 CAAACGATGGCACTCACTCA 58.488 50.000 0.00 0.00 0.00 3.41
4400 4784 0.166814 GCAAACGATGGCACTCACTC 59.833 55.000 0.00 0.00 0.00 3.51
4401 4785 0.250467 AGCAAACGATGGCACTCACT 60.250 50.000 0.00 0.00 0.00 3.41
4436 4820 3.953612 AGACATTCAGACAAGTGCCAAAA 59.046 39.130 0.00 0.00 0.00 2.44
4495 4885 1.826487 AACCGGACAACCAGCAACC 60.826 57.895 9.46 0.00 35.59 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.