Multiple sequence alignment - TraesCS6B01G301900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G301900 chr6B 100.000 4361 0 0 1 4361 541150918 541155278 0.000000e+00 8054.0
1 TraesCS6B01G301900 chr6B 91.549 142 9 3 583 724 437165044 437165182 4.450000e-45 193.0
2 TraesCS6B01G301900 chr6B 94.355 124 7 0 583 706 20544795 20544918 1.600000e-44 191.0
3 TraesCS6B01G301900 chr6B 82.883 111 16 2 2001 2110 232742942 232743050 3.590000e-16 97.1
4 TraesCS6B01G301900 chr6A 89.907 1615 102 20 701 2276 501180795 501182387 0.000000e+00 2023.0
5 TraesCS6B01G301900 chr6A 86.863 1020 71 18 2757 3722 501183045 501184055 0.000000e+00 1083.0
6 TraesCS6B01G301900 chr6A 90.741 108 9 1 4220 4326 501220273 501220380 4.550000e-30 143.0
7 TraesCS6B01G301900 chr6D 90.069 1309 79 14 708 1985 359523182 359524470 0.000000e+00 1650.0
8 TraesCS6B01G301900 chr6D 89.549 1263 63 29 2499 3696 359524783 359526041 0.000000e+00 1537.0
9 TraesCS6B01G301900 chr6D 85.455 275 38 2 3929 4203 359526870 359527142 7.140000e-73 285.0
10 TraesCS6B01G301900 chr6D 93.694 111 5 1 2266 2376 359524466 359524574 9.700000e-37 165.0
11 TraesCS6B01G301900 chr6D 91.262 103 6 2 2376 2476 359524686 359524787 2.120000e-28 137.0
12 TraesCS6B01G301900 chr6D 93.651 63 3 1 3743 3805 359526054 359526115 4.640000e-15 93.5
13 TraesCS6B01G301900 chr4B 98.837 516 6 0 71 586 82676611 82677126 0.000000e+00 920.0
14 TraesCS6B01G301900 chr4B 85.714 91 12 1 2492 2581 99760714 99760624 1.290000e-15 95.3
15 TraesCS6B01G301900 chr3D 97.856 513 10 1 71 583 81384442 81383931 0.000000e+00 885.0
16 TraesCS6B01G301900 chr3D 98.333 60 1 0 1 60 390121008 390121067 5.960000e-19 106.0
17 TraesCS6B01G301900 chr3D 96.667 60 2 0 1 60 81388839 81388780 2.780000e-17 100.0
18 TraesCS6B01G301900 chr7D 97.313 521 13 1 71 591 411551919 411552438 0.000000e+00 883.0
19 TraesCS6B01G301900 chr7D 96.402 528 16 3 71 596 109368445 109368971 0.000000e+00 867.0
20 TraesCS6B01G301900 chr7D 98.333 60 1 0 1 60 411547397 411547456 5.960000e-19 106.0
21 TraesCS6B01G301900 chr7D 86.420 81 11 0 2492 2572 532199522 532199602 6.010000e-14 89.8
22 TraesCS6B01G301900 chr1B 97.661 513 12 0 71 583 179878697 179878185 0.000000e+00 881.0
23 TraesCS6B01G301900 chr1B 92.481 133 9 1 583 714 580156428 580156560 5.760000e-44 189.0
24 TraesCS6B01G301900 chr1B 98.333 60 1 0 1 60 179882418 179882359 5.960000e-19 106.0
25 TraesCS6B01G301900 chr1B 100.000 29 0 0 3696 3724 352390062 352390090 2.000000e-03 54.7
26 TraesCS6B01G301900 chr2D 97.466 513 12 1 71 583 406703800 406704311 0.000000e+00 874.0
27 TraesCS6B01G301900 chr2D 96.887 514 15 1 71 584 19272242 19272754 0.000000e+00 859.0
28 TraesCS6B01G301900 chr2D 96.693 514 16 1 71 584 274363426 274362914 0.000000e+00 854.0
29 TraesCS6B01G301900 chr3A 96.226 530 16 2 71 598 41532213 41532740 0.000000e+00 865.0
30 TraesCS6B01G301900 chr3A 91.667 132 11 0 583 714 78733328 78733197 2.680000e-42 183.0
31 TraesCS6B01G301900 chr3A 89.474 95 6 3 1421 1515 1315414 1315324 2.760000e-22 117.0
32 TraesCS6B01G301900 chr3A 98.333 60 1 0 1 60 730212628 730212687 5.960000e-19 106.0
33 TraesCS6B01G301900 chr3A 82.883 111 16 2 2001 2110 424727566 424727674 3.590000e-16 97.1
34 TraesCS6B01G301900 chr2A 92.481 133 8 2 583 713 29277981 29277849 5.760000e-44 189.0
35 TraesCS6B01G301900 chr2A 92.308 130 10 0 583 712 306015673 306015802 7.450000e-43 185.0
36 TraesCS6B01G301900 chr2A 98.333 60 1 0 1 60 100123613 100123554 5.960000e-19 106.0
37 TraesCS6B01G301900 chr7A 92.424 132 9 1 583 714 721097293 721097163 2.070000e-43 187.0
38 TraesCS6B01G301900 chr7A 86.585 82 10 1 2492 2572 191487495 191487576 6.010000e-14 89.8
39 TraesCS6B01G301900 chr1A 92.969 128 8 1 583 710 65567191 65567317 7.450000e-43 185.0
40 TraesCS6B01G301900 chr1A 96.970 33 1 0 3929 3961 419027201 419027169 6.090000e-04 56.5
41 TraesCS6B01G301900 chr5A 91.667 132 11 0 583 714 626961645 626961514 2.680000e-42 183.0
42 TraesCS6B01G301900 chr5A 98.333 60 1 0 1 60 309288369 309288310 5.960000e-19 106.0
43 TraesCS6B01G301900 chrUn 95.588 68 3 0 1421 1488 43321740 43321807 4.610000e-20 110.0
44 TraesCS6B01G301900 chr3B 95.588 68 3 0 1421 1488 989566 989499 4.610000e-20 110.0
45 TraesCS6B01G301900 chr4A 98.333 60 1 0 1 60 7330679 7330738 5.960000e-19 106.0
46 TraesCS6B01G301900 chr4A 98.333 60 1 0 1 60 593660910 593660851 5.960000e-19 106.0
47 TraesCS6B01G301900 chr2B 86.585 82 10 1 2492 2572 256379062 256379143 6.010000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G301900 chr6B 541150918 541155278 4360 False 8054.000000 8054 100.000000 1 4361 1 chr6B.!!$F4 4360
1 TraesCS6B01G301900 chr6A 501180795 501184055 3260 False 1553.000000 2023 88.385000 701 3722 2 chr6A.!!$F2 3021
2 TraesCS6B01G301900 chr6D 359523182 359527142 3960 False 644.583333 1650 90.613333 708 4203 6 chr6D.!!$F1 3495
3 TraesCS6B01G301900 chr4B 82676611 82677126 515 False 920.000000 920 98.837000 71 586 1 chr4B.!!$F1 515
4 TraesCS6B01G301900 chr3D 81383931 81384442 511 True 885.000000 885 97.856000 71 583 1 chr3D.!!$R1 512
5 TraesCS6B01G301900 chr7D 411551919 411552438 519 False 883.000000 883 97.313000 71 591 1 chr7D.!!$F3 520
6 TraesCS6B01G301900 chr7D 109368445 109368971 526 False 867.000000 867 96.402000 71 596 1 chr7D.!!$F1 525
7 TraesCS6B01G301900 chr1B 179878185 179882418 4233 True 493.500000 881 97.997000 1 583 2 chr1B.!!$R1 582
8 TraesCS6B01G301900 chr2D 406703800 406704311 511 False 874.000000 874 97.466000 71 583 1 chr2D.!!$F2 512
9 TraesCS6B01G301900 chr2D 19272242 19272754 512 False 859.000000 859 96.887000 71 584 1 chr2D.!!$F1 513
10 TraesCS6B01G301900 chr2D 274362914 274363426 512 True 854.000000 854 96.693000 71 584 1 chr2D.!!$R1 513
11 TraesCS6B01G301900 chr3A 41532213 41532740 527 False 865.000000 865 96.226000 71 598 1 chr3A.!!$F1 527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
681 4333 0.955905 ACGCAAATTTAACCGTGCCT 59.044 45.0 9.12 0.0 33.33 4.75 F
1985 5696 0.183731 GGTTCCCCTTATCTGGCTGG 59.816 60.0 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2083 5795 0.096454 GGCGTTACGACTGGCAAATC 59.904 55.0 9.62 0.0 0.00 2.17 R
3870 8137 0.032952 CCTCCAAGTCCGTGTTCGAA 59.967 55.0 0.00 0.0 39.71 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.486551 GCTTATGCCTACTGAACTATATTCGAG 59.513 40.741 0.00 0.00 0.00 4.04
60 61 8.106462 AGAGTGTATAGCAGATTAGAGCAGATA 58.894 37.037 0.00 0.00 0.00 1.98
62 63 9.083422 AGTGTATAGCAGATTAGAGCAGATAAA 57.917 33.333 0.00 0.00 0.00 1.40
63 64 9.868277 GTGTATAGCAGATTAGAGCAGATAAAT 57.132 33.333 0.00 0.00 0.00 1.40
436 4088 3.164268 AGGCAAGCATGTTGACCAATTA 58.836 40.909 9.42 0.00 0.00 1.40
503 4155 5.798125 ATCTGATGGTCGTTGTCTGATAT 57.202 39.130 0.00 0.00 31.48 1.63
587 4239 4.751060 CACGGGCATTGTACTAGTAGAAA 58.249 43.478 15.66 8.24 0.00 2.52
591 4243 6.323225 ACGGGCATTGTACTAGTAGAAATAGT 59.677 38.462 15.66 9.33 37.29 2.12
592 4244 7.503566 ACGGGCATTGTACTAGTAGAAATAGTA 59.496 37.037 15.66 0.00 35.20 1.82
593 4245 8.521176 CGGGCATTGTACTAGTAGAAATAGTAT 58.479 37.037 15.66 0.00 37.87 2.12
632 4284 9.604626 CTTAGCTAGTAGAAATAAATGCAATGC 57.395 33.333 0.00 0.00 0.00 3.56
633 4285 6.662616 AGCTAGTAGAAATAAATGCAATGCG 58.337 36.000 0.00 0.00 0.00 4.73
634 4286 6.260936 AGCTAGTAGAAATAAATGCAATGCGT 59.739 34.615 0.00 0.00 0.00 5.24
635 4287 6.575201 GCTAGTAGAAATAAATGCAATGCGTC 59.425 38.462 0.00 0.00 0.00 5.19
636 4288 5.821204 AGTAGAAATAAATGCAATGCGTCC 58.179 37.500 0.00 0.00 0.00 4.79
637 4289 4.989279 AGAAATAAATGCAATGCGTCCT 57.011 36.364 0.00 0.00 0.00 3.85
638 4290 6.765989 AGTAGAAATAAATGCAATGCGTCCTA 59.234 34.615 0.00 0.00 0.00 2.94
639 4291 6.449635 AGAAATAAATGCAATGCGTCCTAA 57.550 33.333 0.00 0.00 0.00 2.69
640 4292 6.862209 AGAAATAAATGCAATGCGTCCTAAA 58.138 32.000 0.00 0.00 0.00 1.85
641 4293 6.751888 AGAAATAAATGCAATGCGTCCTAAAC 59.248 34.615 0.00 0.00 0.00 2.01
642 4294 2.939460 AATGCAATGCGTCCTAAACC 57.061 45.000 0.00 0.00 0.00 3.27
643 4295 2.128771 ATGCAATGCGTCCTAAACCT 57.871 45.000 0.00 0.00 0.00 3.50
644 4296 1.904287 TGCAATGCGTCCTAAACCTT 58.096 45.000 0.00 0.00 0.00 3.50
645 4297 1.539388 TGCAATGCGTCCTAAACCTTG 59.461 47.619 0.00 0.00 0.00 3.61
646 4298 1.539827 GCAATGCGTCCTAAACCTTGT 59.460 47.619 0.00 0.00 0.00 3.16
647 4299 2.414161 GCAATGCGTCCTAAACCTTGTC 60.414 50.000 0.00 0.00 0.00 3.18
648 4300 3.074412 CAATGCGTCCTAAACCTTGTCT 58.926 45.455 0.00 0.00 0.00 3.41
649 4301 4.250464 CAATGCGTCCTAAACCTTGTCTA 58.750 43.478 0.00 0.00 0.00 2.59
650 4302 4.755266 ATGCGTCCTAAACCTTGTCTAT 57.245 40.909 0.00 0.00 0.00 1.98
651 4303 4.546829 TGCGTCCTAAACCTTGTCTATT 57.453 40.909 0.00 0.00 0.00 1.73
652 4304 5.664294 TGCGTCCTAAACCTTGTCTATTA 57.336 39.130 0.00 0.00 0.00 0.98
653 4305 6.229936 TGCGTCCTAAACCTTGTCTATTAT 57.770 37.500 0.00 0.00 0.00 1.28
654 4306 6.046593 TGCGTCCTAAACCTTGTCTATTATG 58.953 40.000 0.00 0.00 0.00 1.90
655 4307 5.465724 GCGTCCTAAACCTTGTCTATTATGG 59.534 44.000 0.00 0.00 0.00 2.74
656 4308 6.684613 GCGTCCTAAACCTTGTCTATTATGGA 60.685 42.308 0.00 0.00 0.00 3.41
657 4309 7.270047 CGTCCTAAACCTTGTCTATTATGGAA 58.730 38.462 0.00 0.00 0.00 3.53
658 4310 7.767198 CGTCCTAAACCTTGTCTATTATGGAAA 59.233 37.037 0.00 0.00 0.00 3.13
659 4311 9.628500 GTCCTAAACCTTGTCTATTATGGAAAT 57.372 33.333 0.00 0.00 0.00 2.17
660 4312 9.627123 TCCTAAACCTTGTCTATTATGGAAATG 57.373 33.333 0.00 0.00 0.00 2.32
661 4313 8.352942 CCTAAACCTTGTCTATTATGGAAATGC 58.647 37.037 0.00 0.00 0.00 3.56
662 4314 7.716799 AAACCTTGTCTATTATGGAAATGCA 57.283 32.000 0.00 0.00 0.00 3.96
663 4315 6.699575 ACCTTGTCTATTATGGAAATGCAC 57.300 37.500 0.00 0.00 0.00 4.57
664 4316 5.296780 ACCTTGTCTATTATGGAAATGCACG 59.703 40.000 0.00 0.00 0.00 5.34
665 4317 4.811555 TGTCTATTATGGAAATGCACGC 57.188 40.909 0.00 0.00 0.00 5.34
666 4318 4.195416 TGTCTATTATGGAAATGCACGCA 58.805 39.130 0.00 0.00 0.00 5.24
667 4319 4.637977 TGTCTATTATGGAAATGCACGCAA 59.362 37.500 0.00 0.00 0.00 4.85
668 4320 5.124617 TGTCTATTATGGAAATGCACGCAAA 59.875 36.000 0.00 0.00 0.00 3.68
669 4321 6.183360 TGTCTATTATGGAAATGCACGCAAAT 60.183 34.615 0.00 0.00 0.00 2.32
670 4322 6.697019 GTCTATTATGGAAATGCACGCAAATT 59.303 34.615 0.00 0.00 0.00 1.82
671 4323 7.222611 GTCTATTATGGAAATGCACGCAAATTT 59.777 33.333 0.00 0.00 0.00 1.82
672 4324 8.409371 TCTATTATGGAAATGCACGCAAATTTA 58.591 29.630 0.00 0.00 0.00 1.40
673 4325 7.840342 ATTATGGAAATGCACGCAAATTTAA 57.160 28.000 0.00 0.00 0.00 1.52
674 4326 4.981389 TGGAAATGCACGCAAATTTAAC 57.019 36.364 0.00 0.00 0.00 2.01
675 4327 3.743396 TGGAAATGCACGCAAATTTAACC 59.257 39.130 0.00 0.00 0.00 2.85
676 4328 3.181535 GGAAATGCACGCAAATTTAACCG 60.182 43.478 0.00 0.00 0.00 4.44
677 4329 2.715737 ATGCACGCAAATTTAACCGT 57.284 40.000 0.00 5.27 0.00 4.83
680 4332 1.056869 CACGCAAATTTAACCGTGCC 58.943 50.000 18.69 0.00 43.40 5.01
681 4333 0.955905 ACGCAAATTTAACCGTGCCT 59.044 45.000 9.12 0.00 33.33 4.75
682 4334 1.338655 ACGCAAATTTAACCGTGCCTT 59.661 42.857 9.12 0.00 33.33 4.35
683 4335 1.982913 CGCAAATTTAACCGTGCCTTC 59.017 47.619 0.00 0.00 33.33 3.46
684 4336 2.351350 CGCAAATTTAACCGTGCCTTCT 60.351 45.455 0.00 0.00 33.33 2.85
685 4337 3.120130 CGCAAATTTAACCGTGCCTTCTA 60.120 43.478 0.00 0.00 33.33 2.10
686 4338 4.614078 CGCAAATTTAACCGTGCCTTCTAA 60.614 41.667 0.00 0.00 33.33 2.10
687 4339 5.224135 GCAAATTTAACCGTGCCTTCTAAA 58.776 37.500 0.00 0.00 0.00 1.85
688 4340 5.118050 GCAAATTTAACCGTGCCTTCTAAAC 59.882 40.000 0.00 0.00 0.00 2.01
689 4341 6.443792 CAAATTTAACCGTGCCTTCTAAACT 58.556 36.000 0.00 0.00 0.00 2.66
690 4342 5.622770 ATTTAACCGTGCCTTCTAAACTG 57.377 39.130 0.00 0.00 0.00 3.16
691 4343 2.632987 AACCGTGCCTTCTAAACTGT 57.367 45.000 0.00 0.00 0.00 3.55
692 4344 1.878953 ACCGTGCCTTCTAAACTGTG 58.121 50.000 0.00 0.00 0.00 3.66
693 4345 1.414919 ACCGTGCCTTCTAAACTGTGA 59.585 47.619 0.00 0.00 0.00 3.58
694 4346 1.798813 CCGTGCCTTCTAAACTGTGAC 59.201 52.381 0.00 0.00 0.00 3.67
695 4347 1.455786 CGTGCCTTCTAAACTGTGACG 59.544 52.381 0.00 0.00 0.00 4.35
696 4348 1.798813 GTGCCTTCTAAACTGTGACGG 59.201 52.381 0.00 0.00 0.00 4.79
697 4349 1.689813 TGCCTTCTAAACTGTGACGGA 59.310 47.619 0.00 0.00 0.00 4.69
698 4350 2.288825 TGCCTTCTAAACTGTGACGGAG 60.289 50.000 0.00 0.00 0.00 4.63
699 4351 2.931320 GCCTTCTAAACTGTGACGGAGG 60.931 54.545 0.00 0.00 0.00 4.30
716 4368 6.057321 ACGGAGGGAGTATCAAATTTTGTA 57.943 37.500 8.89 0.00 36.25 2.41
724 4376 8.674607 GGGAGTATCAAATTTTGTATCGAAAGT 58.325 33.333 8.89 0.00 36.25 2.66
794 4446 3.804036 TCAGCCCATAATAAACCGTGAG 58.196 45.455 0.00 0.00 0.00 3.51
798 4450 4.080526 AGCCCATAATAAACCGTGAGAAGT 60.081 41.667 0.00 0.00 0.00 3.01
803 4455 7.767198 CCCATAATAAACCGTGAGAAGTAAGAA 59.233 37.037 0.00 0.00 0.00 2.52
806 4458 7.521509 AATAAACCGTGAGAAGTAAGAATCG 57.478 36.000 0.00 0.00 0.00 3.34
816 4468 6.776116 TGAGAAGTAAGAATCGGGCTAAGATA 59.224 38.462 0.00 0.00 0.00 1.98
951 4603 3.071206 TCGCTGTGCCTCCTCCTC 61.071 66.667 0.00 0.00 0.00 3.71
962 4614 4.150454 CCTCCTCCCCTCCGCTCT 62.150 72.222 0.00 0.00 0.00 4.09
968 4620 2.203567 CCCCTCCGCTCTCCTAGG 60.204 72.222 0.82 0.82 0.00 3.02
969 4621 2.203567 CCCTCCGCTCTCCTAGGG 60.204 72.222 9.46 0.00 42.72 3.53
970 4622 2.604152 CCTCCGCTCTCCTAGGGT 59.396 66.667 9.46 0.00 36.43 4.34
971 4623 1.075896 CCTCCGCTCTCCTAGGGTT 60.076 63.158 9.46 0.00 36.43 4.11
972 4624 1.110518 CCTCCGCTCTCCTAGGGTTC 61.111 65.000 9.46 0.00 36.43 3.62
973 4625 1.448922 CTCCGCTCTCCTAGGGTTCG 61.449 65.000 9.46 7.70 36.43 3.95
974 4626 2.413765 CGCTCTCCTAGGGTTCGC 59.586 66.667 9.46 6.09 33.54 4.70
975 4627 2.122167 CGCTCTCCTAGGGTTCGCT 61.122 63.158 9.46 0.00 33.54 4.93
976 4628 1.737201 GCTCTCCTAGGGTTCGCTC 59.263 63.158 9.46 0.00 0.00 5.03
977 4629 2.026522 CTCTCCTAGGGTTCGCTCG 58.973 63.158 9.46 0.00 0.00 5.03
978 4630 2.065906 CTCTCCTAGGGTTCGCTCGC 62.066 65.000 9.46 0.00 0.00 5.03
979 4631 2.044252 TCCTAGGGTTCGCTCGCT 60.044 61.111 9.46 2.53 34.99 4.93
980 4632 2.065906 CTCCTAGGGTTCGCTCGCTC 62.066 65.000 9.46 0.00 32.95 5.03
981 4633 2.024871 CTAGGGTTCGCTCGCTCG 59.975 66.667 0.00 0.00 32.95 5.03
982 4634 2.749044 TAGGGTTCGCTCGCTCGT 60.749 61.111 0.00 0.00 32.95 4.18
983 4635 2.649843 CTAGGGTTCGCTCGCTCGTC 62.650 65.000 0.00 0.00 32.95 4.20
1140 4816 1.345630 TGGGCCTGGGGTAAGCTATTA 60.346 52.381 4.53 0.00 0.00 0.98
1477 5154 4.363990 AGCGAGGAGTGCACCGTG 62.364 66.667 14.63 0.19 34.73 4.94
1504 5181 6.672266 TGGGGTATGATACAGATCTTCTTC 57.328 41.667 4.83 0.00 32.79 2.87
1535 5212 3.139077 CCCTGTTTCCTGCCGTATAATC 58.861 50.000 0.00 0.00 0.00 1.75
1544 5221 4.275689 TCCTGCCGTATAATCTTGCAATTG 59.724 41.667 0.00 0.00 0.00 2.32
1545 5222 4.036734 CCTGCCGTATAATCTTGCAATTGT 59.963 41.667 7.40 0.00 0.00 2.71
1614 5318 4.080413 TGCTCAATCTGGTATTGGTCATGA 60.080 41.667 0.00 0.00 0.00 3.07
1633 5337 6.968904 GTCATGATGTGAATATTGGTGTGTTC 59.031 38.462 0.00 0.00 38.90 3.18
1692 5396 6.792326 GCTTTATTAGCGGTTTCATAGGTTT 58.208 36.000 0.00 0.00 40.71 3.27
1811 5520 8.554835 TGTGTTGCTGTGCTACTAATTATTTA 57.445 30.769 5.84 0.00 35.51 1.40
1877 5588 4.663120 ACAACCTATATGGCATTGGGAGTA 59.337 41.667 4.78 0.00 40.22 2.59
1898 5609 3.917300 ACTTGGGTTTACATGGTTTCCA 58.083 40.909 0.00 0.00 38.19 3.53
1940 5651 2.111878 ACTGCCGCTTGAAGCTGT 59.888 55.556 15.92 5.96 39.60 4.40
1985 5696 0.183731 GGTTCCCCTTATCTGGCTGG 59.816 60.000 0.00 0.00 0.00 4.85
1998 5709 0.698238 TGGCTGGGCTGAAGTTACAT 59.302 50.000 0.00 0.00 0.00 2.29
2041 5753 9.893305 AACTTGTTAATCTGCACTGTTTATAAC 57.107 29.630 0.00 0.00 0.00 1.89
2069 5781 5.894298 ATAGATTGTGCTGTGGAGGATTA 57.106 39.130 0.00 0.00 0.00 1.75
2070 5782 4.574674 AGATTGTGCTGTGGAGGATTAA 57.425 40.909 0.00 0.00 0.00 1.40
2076 5788 3.445096 GTGCTGTGGAGGATTAATTGCTT 59.555 43.478 0.00 0.00 0.00 3.91
2077 5789 3.444742 TGCTGTGGAGGATTAATTGCTTG 59.555 43.478 0.00 0.00 0.00 4.01
2078 5790 3.696051 GCTGTGGAGGATTAATTGCTTGA 59.304 43.478 0.00 0.00 0.00 3.02
2079 5791 4.340381 GCTGTGGAGGATTAATTGCTTGAT 59.660 41.667 0.00 0.00 0.00 2.57
2080 5792 5.532406 GCTGTGGAGGATTAATTGCTTGATA 59.468 40.000 0.00 0.00 0.00 2.15
2081 5793 6.039717 GCTGTGGAGGATTAATTGCTTGATAA 59.960 38.462 0.00 0.00 0.00 1.75
2082 5794 7.255730 GCTGTGGAGGATTAATTGCTTGATAAT 60.256 37.037 0.00 0.00 0.00 1.28
2083 5795 7.944061 TGTGGAGGATTAATTGCTTGATAATG 58.056 34.615 0.00 0.00 0.00 1.90
2084 5796 7.779326 TGTGGAGGATTAATTGCTTGATAATGA 59.221 33.333 0.00 0.00 0.00 2.57
2085 5797 8.800332 GTGGAGGATTAATTGCTTGATAATGAT 58.200 33.333 0.00 0.00 0.00 2.45
2086 5798 9.370930 TGGAGGATTAATTGCTTGATAATGATT 57.629 29.630 0.00 0.00 0.00 2.57
2089 5801 9.485206 AGGATTAATTGCTTGATAATGATTTGC 57.515 29.630 0.00 0.00 0.00 3.68
2100 5812 3.740044 AATGATTTGCCAGTCGTAACG 57.260 42.857 0.00 0.00 0.00 3.18
2131 5843 3.772619 GCCCGGTGCTTATCTAACA 57.227 52.632 0.00 0.00 36.87 2.41
2132 5844 2.256117 GCCCGGTGCTTATCTAACAT 57.744 50.000 0.00 0.00 36.87 2.71
2133 5845 2.143925 GCCCGGTGCTTATCTAACATC 58.856 52.381 0.00 0.00 36.87 3.06
2139 5851 4.508124 CGGTGCTTATCTAACATCACTTCC 59.492 45.833 0.00 0.00 0.00 3.46
2140 5852 5.428253 GGTGCTTATCTAACATCACTTCCA 58.572 41.667 0.00 0.00 0.00 3.53
2143 5855 7.880195 GGTGCTTATCTAACATCACTTCCATAT 59.120 37.037 0.00 0.00 0.00 1.78
2145 5857 9.276590 TGCTTATCTAACATCACTTCCATATTG 57.723 33.333 0.00 0.00 0.00 1.90
2157 5869 7.802738 TCACTTCCATATTGTTGTTTTACTCG 58.197 34.615 0.00 0.00 0.00 4.18
2161 5873 6.904498 TCCATATTGTTGTTTTACTCGTTGG 58.096 36.000 0.00 0.00 0.00 3.77
2174 5886 3.343617 ACTCGTTGGATTGTGGTATTGG 58.656 45.455 0.00 0.00 0.00 3.16
2175 5887 2.682856 CTCGTTGGATTGTGGTATTGGG 59.317 50.000 0.00 0.00 0.00 4.12
2176 5888 2.306219 TCGTTGGATTGTGGTATTGGGA 59.694 45.455 0.00 0.00 0.00 4.37
2177 5889 3.053991 TCGTTGGATTGTGGTATTGGGAT 60.054 43.478 0.00 0.00 0.00 3.85
2178 5890 3.066621 CGTTGGATTGTGGTATTGGGATG 59.933 47.826 0.00 0.00 0.00 3.51
2184 5897 0.106217 GTGGTATTGGGATGTGGGGG 60.106 60.000 0.00 0.00 0.00 5.40
2196 5909 2.445845 TGGGGGACTATCCTGGCG 60.446 66.667 0.00 0.00 36.57 5.69
2202 5915 2.522185 GGGACTATCCTGGCGTATGTA 58.478 52.381 0.00 0.00 36.57 2.29
2229 5942 5.855740 AGTGACTAGCCTCATAGTAAACC 57.144 43.478 0.00 0.00 36.13 3.27
2241 5954 6.238842 CCTCATAGTAAACCAGCATCCATTTG 60.239 42.308 0.00 0.00 0.00 2.32
2245 5958 8.632679 CATAGTAAACCAGCATCCATTTGTTAT 58.367 33.333 0.00 0.00 0.00 1.89
2247 5960 7.906327 AGTAAACCAGCATCCATTTGTTATTT 58.094 30.769 0.00 0.00 0.00 1.40
2248 5961 9.030452 AGTAAACCAGCATCCATTTGTTATTTA 57.970 29.630 0.00 0.00 0.00 1.40
2249 5962 9.301153 GTAAACCAGCATCCATTTGTTATTTAG 57.699 33.333 0.00 0.00 0.00 1.85
2250 5963 7.716799 AACCAGCATCCATTTGTTATTTAGA 57.283 32.000 0.00 0.00 0.00 2.10
2251 5964 7.716799 ACCAGCATCCATTTGTTATTTAGAA 57.283 32.000 0.00 0.00 0.00 2.10
2306 6067 3.146104 ACTTGGAGGTGGACAATGAAG 57.854 47.619 0.00 0.00 0.00 3.02
2346 6107 5.869579 TCACTTCTTTGTAGGCTGAAATCT 58.130 37.500 0.00 0.00 0.00 2.40
2347 6108 6.299141 TCACTTCTTTGTAGGCTGAAATCTT 58.701 36.000 0.00 0.00 0.00 2.40
2380 6253 6.727824 AAGTGACACAATATTCAGTAGCAC 57.272 37.500 8.59 0.00 0.00 4.40
2406 6279 5.221224 TGTTGATTGCAAAAGGAAGGTACTG 60.221 40.000 1.71 0.00 35.10 2.74
2413 6286 0.320771 AAGGAAGGTACTGCTGTGCG 60.321 55.000 6.48 0.00 40.86 5.34
2420 6293 1.144969 GTACTGCTGTGCGCTTAACA 58.855 50.000 9.73 3.51 40.11 2.41
2490 6365 9.088512 GTTCACATCTAGTTATGTCCAAAGTAG 57.911 37.037 0.00 0.00 38.01 2.57
2493 6368 9.653287 CACATCTAGTTATGTCCAAAGTAGAAA 57.347 33.333 4.90 0.00 40.49 2.52
2591 6471 3.287222 TGTGCACATTAGGATTTAGGCC 58.713 45.455 17.42 0.00 0.00 5.19
2615 6495 1.826024 CCTTCGCACTCCTAGGCAT 59.174 57.895 2.96 0.00 0.00 4.40
2654 6537 4.585879 ACGCCTTGAAGTAATAACATGGT 58.414 39.130 0.00 0.00 33.37 3.55
2698 6581 6.098982 AGGACTAGAGGTTAGAATGTGGATTG 59.901 42.308 0.00 0.00 0.00 2.67
2727 6610 6.823689 GCTTGGACTTCAGTCTCCATATTTTA 59.176 38.462 6.91 0.00 44.20 1.52
2753 6636 9.786105 AAATTGCCAGTTGAGTTTTTATTTTTG 57.214 25.926 0.00 0.00 0.00 2.44
2754 6637 6.356757 TGCCAGTTGAGTTTTTATTTTTGC 57.643 33.333 0.00 0.00 0.00 3.68
2801 6709 7.706607 TCAGGTGTTATACGAAATTGATCTGAG 59.293 37.037 0.00 0.00 0.00 3.35
2804 6712 7.924412 GGTGTTATACGAAATTGATCTGAGGTA 59.076 37.037 0.00 0.00 0.00 3.08
2815 6723 8.641498 AATTGATCTGAGGTAATTTCTTGTGT 57.359 30.769 0.00 0.00 0.00 3.72
2816 6724 8.641498 ATTGATCTGAGGTAATTTCTTGTGTT 57.359 30.769 0.00 0.00 0.00 3.32
2838 6746 4.644103 ATCATGTTTAGGACTGCATTGC 57.356 40.909 0.46 0.46 0.00 3.56
2842 6750 3.605634 TGTTTAGGACTGCATTGCGTAT 58.394 40.909 3.84 1.22 0.00 3.06
2884 6824 6.732531 TCAGAAGCTGTCATTGTTGATAAG 57.267 37.500 0.00 0.00 33.56 1.73
2926 6866 3.190327 TGTGTGGACTGTTTGTTTCTGTG 59.810 43.478 0.00 0.00 0.00 3.66
2939 6879 8.511321 TGTTTGTTTCTGTGCTATAATACCAAG 58.489 33.333 0.00 0.00 0.00 3.61
2940 6880 6.677781 TGTTTCTGTGCTATAATACCAAGC 57.322 37.500 0.00 0.00 36.77 4.01
2953 6894 0.681175 ACCAAGCCTGCATTTTGACC 59.319 50.000 6.56 0.00 0.00 4.02
3002 6943 7.850193 ACAAACATTATGTGCAATTATCCCTT 58.150 30.769 0.00 0.00 0.00 3.95
3021 6963 6.712276 TCCCTTTAGTGAATTTTCTCTCCTC 58.288 40.000 0.00 0.00 33.53 3.71
3025 6967 7.550906 CCTTTAGTGAATTTTCTCTCCTCGAAT 59.449 37.037 0.00 0.00 33.53 3.34
3082 7032 5.925397 TGGACATTGCATTGTTGTTTACATC 59.075 36.000 14.95 0.18 36.44 3.06
3121 7072 5.420725 TGCATCTGACTATGTGGTTAAGT 57.579 39.130 0.00 0.00 0.00 2.24
3294 7248 4.035558 TCACTGTTGCTTGCTACTTTTCAG 59.964 41.667 8.43 0.00 0.00 3.02
3491 7446 6.610741 TTGGATTTTTGTTAAACCACATGC 57.389 33.333 0.00 0.00 0.00 4.06
3500 7455 4.236935 GTTAAACCACATGCATCCTTGTG 58.763 43.478 10.57 10.57 43.18 3.33
3563 7518 6.432162 TGGATCTCTCTGTTTTTCTGGAATTG 59.568 38.462 0.00 0.00 0.00 2.32
3623 7578 7.173562 TGCATGTGAAATTTTACTACCTTACGT 59.826 33.333 13.55 0.00 0.00 3.57
3683 7648 5.584649 CCTGATAATTTGTCTCGGCTTACAA 59.415 40.000 0.00 0.00 33.92 2.41
3688 7653 9.651718 GATAATTTGTCTCGGCTTACAAAATAG 57.348 33.333 11.25 0.00 45.69 1.73
3696 7661 6.592607 TCTCGGCTTACAAAATAGATCGTTTT 59.407 34.615 6.17 6.17 0.00 2.43
3697 7662 7.118680 TCTCGGCTTACAAAATAGATCGTTTTT 59.881 33.333 8.54 6.12 0.00 1.94
3725 7694 8.652290 ACATATACTCCCTCTGTAAAGAAATCC 58.348 37.037 0.00 0.00 0.00 3.01
3726 7695 4.846168 ACTCCCTCTGTAAAGAAATCCC 57.154 45.455 0.00 0.00 0.00 3.85
3727 7696 3.523972 ACTCCCTCTGTAAAGAAATCCCC 59.476 47.826 0.00 0.00 0.00 4.81
3728 7697 2.850568 TCCCTCTGTAAAGAAATCCCCC 59.149 50.000 0.00 0.00 0.00 5.40
3729 7698 2.853077 CCCTCTGTAAAGAAATCCCCCT 59.147 50.000 0.00 0.00 0.00 4.79
3730 7699 3.372025 CCCTCTGTAAAGAAATCCCCCTG 60.372 52.174 0.00 0.00 0.00 4.45
3731 7700 3.267031 CCTCTGTAAAGAAATCCCCCTGT 59.733 47.826 0.00 0.00 0.00 4.00
3732 7701 4.473559 CCTCTGTAAAGAAATCCCCCTGTA 59.526 45.833 0.00 0.00 0.00 2.74
3733 7702 5.045140 CCTCTGTAAAGAAATCCCCCTGTAA 60.045 44.000 0.00 0.00 0.00 2.41
3734 7703 6.457159 TCTGTAAAGAAATCCCCCTGTAAA 57.543 37.500 0.00 0.00 0.00 2.01
3735 7704 6.243148 TCTGTAAAGAAATCCCCCTGTAAAC 58.757 40.000 0.00 0.00 0.00 2.01
3736 7705 5.954757 TGTAAAGAAATCCCCCTGTAAACA 58.045 37.500 0.00 0.00 0.00 2.83
3737 7706 6.374588 TGTAAAGAAATCCCCCTGTAAACAA 58.625 36.000 0.00 0.00 0.00 2.83
3738 7707 7.013834 TGTAAAGAAATCCCCCTGTAAACAAT 58.986 34.615 0.00 0.00 0.00 2.71
3739 7708 6.605471 AAAGAAATCCCCCTGTAAACAATC 57.395 37.500 0.00 0.00 0.00 2.67
3740 7709 5.536497 AGAAATCCCCCTGTAAACAATCT 57.464 39.130 0.00 0.00 0.00 2.40
3741 7710 5.903923 AGAAATCCCCCTGTAAACAATCTT 58.096 37.500 0.00 0.00 0.00 2.40
3742 7711 7.039722 AGAAATCCCCCTGTAAACAATCTTA 57.960 36.000 0.00 0.00 0.00 2.10
3743 7712 7.652554 AGAAATCCCCCTGTAAACAATCTTAT 58.347 34.615 0.00 0.00 0.00 1.73
3744 7713 8.787818 AGAAATCCCCCTGTAAACAATCTTATA 58.212 33.333 0.00 0.00 0.00 0.98
3745 7714 9.588096 GAAATCCCCCTGTAAACAATCTTATAT 57.412 33.333 0.00 0.00 0.00 0.86
3746 7715 9.951866 AAATCCCCCTGTAAACAATCTTATATT 57.048 29.630 0.00 0.00 0.00 1.28
3747 7716 9.951866 AATCCCCCTGTAAACAATCTTATATTT 57.048 29.630 0.00 0.00 0.00 1.40
3748 7717 8.990163 TCCCCCTGTAAACAATCTTATATTTC 57.010 34.615 0.00 0.00 0.00 2.17
3749 7718 8.787818 TCCCCCTGTAAACAATCTTATATTTCT 58.212 33.333 0.00 0.00 0.00 2.52
3750 7719 9.421399 CCCCCTGTAAACAATCTTATATTTCTT 57.579 33.333 0.00 0.00 0.00 2.52
3796 7765 2.483877 CAGTCTCTTAAAATGGCACGCA 59.516 45.455 0.00 0.00 0.00 5.24
3798 7767 3.568007 AGTCTCTTAAAATGGCACGCAAA 59.432 39.130 0.00 0.00 0.00 3.68
3799 7768 3.914364 GTCTCTTAAAATGGCACGCAAAG 59.086 43.478 0.00 0.00 0.00 2.77
3801 7770 4.037446 TCTCTTAAAATGGCACGCAAAGTT 59.963 37.500 0.00 0.00 0.00 2.66
3802 7771 4.047822 TCTTAAAATGGCACGCAAAGTTG 58.952 39.130 0.00 0.00 0.00 3.16
3820 7793 3.576550 AGTTGCCGGTCAAAATTTATGGT 59.423 39.130 12.01 0.00 36.26 3.55
3821 7794 4.039852 AGTTGCCGGTCAAAATTTATGGTT 59.960 37.500 12.01 0.00 36.26 3.67
3822 7795 4.608948 TGCCGGTCAAAATTTATGGTTT 57.391 36.364 1.90 0.00 0.00 3.27
3823 7796 5.723672 TGCCGGTCAAAATTTATGGTTTA 57.276 34.783 1.90 0.00 0.00 2.01
3825 7798 5.927115 TGCCGGTCAAAATTTATGGTTTAAC 59.073 36.000 1.90 0.00 0.00 2.01
3841 8108 6.644347 TGGTTTAACAAAAATTTGAGGAGCA 58.356 32.000 12.54 8.00 40.55 4.26
3843 8110 7.065204 TGGTTTAACAAAAATTTGAGGAGCAAC 59.935 33.333 12.54 6.34 40.55 4.17
3844 8111 7.065204 GGTTTAACAAAAATTTGAGGAGCAACA 59.935 33.333 12.54 0.00 40.55 3.33
3846 8113 6.421377 AACAAAAATTTGAGGAGCAACAAC 57.579 33.333 12.54 0.00 40.55 3.32
3848 8115 5.936956 ACAAAAATTTGAGGAGCAACAACAA 59.063 32.000 12.54 0.00 40.55 2.83
3851 8118 6.849588 AAATTTGAGGAGCAACAACAATTC 57.150 33.333 0.00 0.00 35.91 2.17
3852 8119 4.998671 TTTGAGGAGCAACAACAATTCA 57.001 36.364 0.00 0.00 35.91 2.57
3853 8120 3.988379 TGAGGAGCAACAACAATTCAC 57.012 42.857 0.00 0.00 0.00 3.18
3854 8121 2.290367 TGAGGAGCAACAACAATTCACG 59.710 45.455 0.00 0.00 0.00 4.35
3857 8124 2.604614 GGAGCAACAACAATTCACGGTC 60.605 50.000 0.00 0.00 0.00 4.79
3858 8125 1.002900 AGCAACAACAATTCACGGTCG 60.003 47.619 0.00 0.00 0.00 4.79
3859 8126 1.268335 GCAACAACAATTCACGGTCGT 60.268 47.619 0.00 0.00 0.00 4.34
3862 8129 2.557317 ACAACAATTCACGGTCGTCTT 58.443 42.857 0.00 0.00 0.00 3.01
3864 8131 3.242608 ACAACAATTCACGGTCGTCTTTG 60.243 43.478 0.00 1.26 0.00 2.77
3865 8132 1.871039 ACAATTCACGGTCGTCTTTGG 59.129 47.619 11.52 0.00 0.00 3.28
3867 8134 1.792006 ATTCACGGTCGTCTTTGGTC 58.208 50.000 0.00 0.00 0.00 4.02
3868 8135 0.595567 TTCACGGTCGTCTTTGGTCG 60.596 55.000 0.00 0.00 0.00 4.79
3869 8136 2.355481 ACGGTCGTCTTTGGTCGC 60.355 61.111 0.00 0.00 0.00 5.19
3870 8137 2.049433 CGGTCGTCTTTGGTCGCT 60.049 61.111 0.00 0.00 0.00 4.93
3871 8138 1.663702 CGGTCGTCTTTGGTCGCTT 60.664 57.895 0.00 0.00 0.00 4.68
3872 8139 1.615107 CGGTCGTCTTTGGTCGCTTC 61.615 60.000 0.00 0.00 0.00 3.86
3874 8141 0.662374 GTCGTCTTTGGTCGCTTCGA 60.662 55.000 0.00 0.00 0.00 3.71
3876 8143 0.161024 CGTCTTTGGTCGCTTCGAAC 59.839 55.000 0.00 0.00 44.56 3.95
3881 8148 2.049802 GGTCGCTTCGAACACGGA 60.050 61.111 13.98 0.00 43.67 4.69
3882 8149 2.370393 GGTCGCTTCGAACACGGAC 61.370 63.158 13.98 9.37 43.67 4.79
3884 8151 0.938168 GTCGCTTCGAACACGGACTT 60.938 55.000 13.98 0.00 37.72 3.01
3885 8152 0.937699 TCGCTTCGAACACGGACTTG 60.938 55.000 13.98 0.00 31.06 3.16
3886 8153 1.860078 GCTTCGAACACGGACTTGG 59.140 57.895 0.00 0.00 0.00 3.61
3888 8155 1.419374 CTTCGAACACGGACTTGGAG 58.581 55.000 0.00 0.00 0.00 3.86
3889 8156 0.032952 TTCGAACACGGACTTGGAGG 59.967 55.000 0.00 0.00 0.00 4.30
3891 8158 0.666577 CGAACACGGACTTGGAGGAC 60.667 60.000 0.00 0.00 0.00 3.85
3892 8159 0.666577 GAACACGGACTTGGAGGACG 60.667 60.000 0.00 0.00 0.00 4.79
3894 8161 1.080705 CACGGACTTGGAGGACGAC 60.081 63.158 0.00 0.00 0.00 4.34
3895 8162 2.273912 ACGGACTTGGAGGACGACC 61.274 63.158 0.00 0.00 0.00 4.79
3896 8163 2.273179 CGGACTTGGAGGACGACCA 61.273 63.158 6.71 0.00 38.94 4.02
3898 8165 0.108138 GGACTTGGAGGACGACCATG 60.108 60.000 6.71 6.82 37.26 3.66
3899 8166 0.895530 GACTTGGAGGACGACCATGA 59.104 55.000 6.71 0.00 37.26 3.07
3900 8167 1.482593 GACTTGGAGGACGACCATGAT 59.517 52.381 6.71 0.00 37.26 2.45
3901 8168 1.909302 ACTTGGAGGACGACCATGATT 59.091 47.619 6.71 0.00 37.26 2.57
3902 8169 2.283298 CTTGGAGGACGACCATGATTG 58.717 52.381 6.71 0.00 37.26 2.67
3903 8170 1.275666 TGGAGGACGACCATGATTGT 58.724 50.000 6.71 0.00 38.94 2.71
3904 8171 2.462723 TGGAGGACGACCATGATTGTA 58.537 47.619 6.71 0.00 38.94 2.41
3906 8173 3.069586 TGGAGGACGACCATGATTGTATC 59.930 47.826 6.71 0.00 38.94 2.24
3908 8175 4.302455 GAGGACGACCATGATTGTATCTG 58.698 47.826 6.71 0.00 38.94 2.90
3910 8177 3.804325 GGACGACCATGATTGTATCTGTG 59.196 47.826 0.00 0.00 35.97 3.66
3912 8179 5.451381 GGACGACCATGATTGTATCTGTGTA 60.451 44.000 0.00 0.00 35.97 2.90
3913 8180 6.161855 ACGACCATGATTGTATCTGTGTAT 57.838 37.500 0.00 0.00 0.00 2.29
3916 8183 7.145323 CGACCATGATTGTATCTGTGTATGTA 58.855 38.462 0.00 0.00 0.00 2.29
3917 8184 7.327032 CGACCATGATTGTATCTGTGTATGTAG 59.673 40.741 0.00 0.00 0.00 2.74
3918 8185 8.023021 ACCATGATTGTATCTGTGTATGTAGT 57.977 34.615 0.00 0.00 0.00 2.73
3920 8187 9.330063 CCATGATTGTATCTGTGTATGTAGTTT 57.670 33.333 0.00 0.00 0.00 2.66
3961 8560 8.773033 AAGCTTGGGTATCTTTTCATTGATAT 57.227 30.769 0.00 0.00 0.00 1.63
4004 8603 3.199071 GGGAGGGTACATCACACAATACA 59.801 47.826 0.00 0.00 30.42 2.29
4007 8606 5.123344 GGAGGGTACATCACACAATACAAAC 59.877 44.000 0.00 0.00 30.42 2.93
4013 8612 4.142902 ACATCACACAATACAAACGCTAGC 60.143 41.667 4.06 4.06 0.00 3.42
4014 8613 2.739913 TCACACAATACAAACGCTAGCC 59.260 45.455 9.66 0.00 0.00 3.93
4043 8642 3.752222 AGCATTGTTCTTGAAGCAGAGAG 59.248 43.478 0.00 0.00 0.00 3.20
4049 8648 3.606595 TCTTGAAGCAGAGAGACATGG 57.393 47.619 0.00 0.00 0.00 3.66
4055 8654 0.469070 GCAGAGAGACATGGGATGCT 59.531 55.000 0.00 0.00 0.00 3.79
4056 8655 1.134159 GCAGAGAGACATGGGATGCTT 60.134 52.381 0.00 0.00 0.00 3.91
4057 8656 2.562635 CAGAGAGACATGGGATGCTTG 58.437 52.381 0.00 0.00 0.00 4.01
4059 8658 1.211457 GAGAGACATGGGATGCTTGGT 59.789 52.381 0.00 0.00 0.00 3.67
4060 8659 1.637553 AGAGACATGGGATGCTTGGTT 59.362 47.619 0.00 0.00 0.00 3.67
4065 8664 2.299867 ACATGGGATGCTTGGTTCAAAC 59.700 45.455 0.00 0.00 0.00 2.93
4067 8666 2.392662 TGGGATGCTTGGTTCAAACAA 58.607 42.857 0.00 0.00 0.00 2.83
4084 8683 7.867305 TCAAACAAAGGATACAACACAACTA 57.133 32.000 0.00 0.00 41.41 2.24
4089 8688 6.546034 ACAAAGGATACAACACAACTAAGCTT 59.454 34.615 3.48 3.48 41.41 3.74
4090 8689 6.560253 AAGGATACAACACAACTAAGCTTG 57.440 37.500 9.86 1.57 41.41 4.01
4098 8697 0.961019 CAACTAAGCTTGCCTTGCCA 59.039 50.000 9.86 0.00 34.95 4.92
4107 8706 2.045536 GCCTTGCCAGGACTCCAG 60.046 66.667 8.31 0.00 44.19 3.86
4109 8708 2.045536 CTTGCCAGGACTCCAGCC 60.046 66.667 7.47 0.00 0.00 4.85
4110 8709 2.853542 TTGCCAGGACTCCAGCCA 60.854 61.111 7.47 0.00 0.00 4.75
4111 8710 2.207501 CTTGCCAGGACTCCAGCCAT 62.208 60.000 7.47 0.00 0.00 4.40
4135 8734 5.046087 TGGATTGTGAAGAGATGAGACACAT 60.046 40.000 0.00 0.00 40.32 3.21
4142 8741 2.690497 AGAGATGAGACACATGGTACCG 59.310 50.000 7.57 0.00 39.56 4.02
4144 8743 1.480954 GATGAGACACATGGTACCGGT 59.519 52.381 13.98 13.98 39.56 5.28
4149 8748 1.141019 CACATGGTACCGGTCCTCG 59.859 63.158 12.40 10.15 38.88 4.63
4159 8758 2.737376 GGTCCTCGCCACGAACAC 60.737 66.667 0.00 0.00 34.74 3.32
4162 8761 2.738521 CCTCGCCACGAACACCAG 60.739 66.667 0.00 0.00 34.74 4.00
4181 8780 2.357517 AGCCACCTTCTTCACGCG 60.358 61.111 3.53 3.53 0.00 6.01
4186 8785 2.436646 CCTTCTTCACGCGGCCAT 60.437 61.111 12.47 0.00 0.00 4.40
4194 8793 3.785859 ACGCGGCCATGACTCCAT 61.786 61.111 12.47 0.00 0.00 3.41
4196 8795 1.956170 CGCGGCCATGACTCCATAC 60.956 63.158 2.24 0.00 0.00 2.39
4203 8802 1.069204 CCATGACTCCATACCCGACTG 59.931 57.143 0.00 0.00 0.00 3.51
4204 8803 1.069204 CATGACTCCATACCCGACTGG 59.931 57.143 0.00 0.00 41.37 4.00
4205 8804 1.327690 TGACTCCATACCCGACTGGC 61.328 60.000 0.00 0.00 37.83 4.85
4206 8805 1.305802 ACTCCATACCCGACTGGCA 60.306 57.895 0.00 0.00 37.83 4.92
4207 8806 0.907704 ACTCCATACCCGACTGGCAA 60.908 55.000 0.00 0.00 37.83 4.52
4208 8807 0.179073 CTCCATACCCGACTGGCAAG 60.179 60.000 0.00 0.00 37.83 4.01
4209 8808 0.616395 TCCATACCCGACTGGCAAGA 60.616 55.000 0.00 0.00 37.83 3.02
4210 8809 0.251916 CCATACCCGACTGGCAAGAA 59.748 55.000 0.00 0.00 37.83 2.52
4211 8810 1.656652 CATACCCGACTGGCAAGAAG 58.343 55.000 0.00 0.00 37.83 2.85
4212 8811 0.541863 ATACCCGACTGGCAAGAAGG 59.458 55.000 0.00 0.00 37.83 3.46
4213 8812 1.550130 TACCCGACTGGCAAGAAGGG 61.550 60.000 19.58 19.58 44.09 3.95
4214 8813 2.592993 CCCGACTGGCAAGAAGGGA 61.593 63.158 17.28 0.00 42.42 4.20
4215 8814 1.374947 CCGACTGGCAAGAAGGGAA 59.625 57.895 0.00 0.00 0.00 3.97
4216 8815 0.250727 CCGACTGGCAAGAAGGGAAA 60.251 55.000 0.00 0.00 0.00 3.13
4217 8816 0.875059 CGACTGGCAAGAAGGGAAAC 59.125 55.000 0.00 0.00 0.00 2.78
4238 8837 3.909312 CGCCATCGTCGTCTGATC 58.091 61.111 0.00 0.00 0.00 2.92
4239 8838 1.658717 CGCCATCGTCGTCTGATCC 60.659 63.158 0.00 0.00 0.00 3.36
4240 8839 1.658717 GCCATCGTCGTCTGATCCG 60.659 63.158 0.00 0.00 0.00 4.18
4241 8840 2.022520 CCATCGTCGTCTGATCCGA 58.977 57.895 0.00 0.00 0.00 4.55
4242 8841 0.593618 CCATCGTCGTCTGATCCGAT 59.406 55.000 0.00 0.00 40.39 4.18
4244 8843 0.593618 ATCGTCGTCTGATCCGATGG 59.406 55.000 10.79 1.58 40.74 3.51
4245 8844 0.463116 TCGTCGTCTGATCCGATGGA 60.463 55.000 10.79 3.48 40.74 3.41
4246 8845 0.593618 CGTCGTCTGATCCGATGGAT 59.406 55.000 6.52 0.00 46.28 3.41
4247 8846 1.001268 CGTCGTCTGATCCGATGGATT 60.001 52.381 6.52 0.00 43.27 3.01
4248 8847 2.398498 GTCGTCTGATCCGATGGATTG 58.602 52.381 6.52 0.00 43.27 2.67
4249 8848 2.034685 GTCGTCTGATCCGATGGATTGA 59.965 50.000 6.52 0.00 43.27 2.57
4250 8849 2.693074 TCGTCTGATCCGATGGATTGAA 59.307 45.455 6.52 0.00 43.27 2.69
4251 8850 3.321968 TCGTCTGATCCGATGGATTGAAT 59.678 43.478 6.52 0.00 43.27 2.57
4252 8851 3.677121 CGTCTGATCCGATGGATTGAATC 59.323 47.826 0.00 0.00 43.27 2.52
4253 8852 4.635223 GTCTGATCCGATGGATTGAATCA 58.365 43.478 7.56 0.00 43.27 2.57
4254 8853 5.059161 GTCTGATCCGATGGATTGAATCAA 58.941 41.667 7.56 0.00 43.27 2.57
4255 8854 5.178996 GTCTGATCCGATGGATTGAATCAAG 59.821 44.000 7.56 0.00 43.27 3.02
4256 8855 4.392047 TGATCCGATGGATTGAATCAAGG 58.608 43.478 7.56 4.60 43.27 3.61
4257 8856 3.213206 TCCGATGGATTGAATCAAGGG 57.787 47.619 7.56 2.08 0.00 3.95
4258 8857 2.509548 TCCGATGGATTGAATCAAGGGT 59.490 45.455 7.56 0.00 0.00 4.34
4259 8858 3.053693 TCCGATGGATTGAATCAAGGGTT 60.054 43.478 7.56 0.00 0.00 4.11
4260 8859 3.701040 CCGATGGATTGAATCAAGGGTTT 59.299 43.478 7.56 0.00 0.00 3.27
4261 8860 4.160252 CCGATGGATTGAATCAAGGGTTTT 59.840 41.667 7.56 0.00 0.00 2.43
4262 8861 5.343249 CGATGGATTGAATCAAGGGTTTTC 58.657 41.667 7.56 0.00 0.00 2.29
4263 8862 5.664457 GATGGATTGAATCAAGGGTTTTCC 58.336 41.667 7.56 3.12 39.75 3.13
4276 8875 3.378911 GGTTTTCCCGATGCTCAAAAA 57.621 42.857 0.00 0.00 0.00 1.94
4277 8876 3.317150 GGTTTTCCCGATGCTCAAAAAG 58.683 45.455 0.00 0.00 0.00 2.27
4278 8877 3.317150 GTTTTCCCGATGCTCAAAAAGG 58.683 45.455 0.00 0.00 0.00 3.11
4279 8878 2.577606 TTCCCGATGCTCAAAAAGGA 57.422 45.000 0.00 0.00 0.00 3.36
4280 8879 2.113860 TCCCGATGCTCAAAAAGGAG 57.886 50.000 0.00 0.00 37.97 3.69
4290 8889 4.589216 CTCAAAAAGGAGCATGGACAAA 57.411 40.909 0.00 0.00 0.00 2.83
4291 8890 4.553323 CTCAAAAAGGAGCATGGACAAAG 58.447 43.478 0.00 0.00 0.00 2.77
4292 8891 3.321682 TCAAAAAGGAGCATGGACAAAGG 59.678 43.478 0.00 0.00 0.00 3.11
4293 8892 1.260544 AAAGGAGCATGGACAAAGGC 58.739 50.000 0.00 0.00 0.00 4.35
4294 8893 0.613012 AAGGAGCATGGACAAAGGCC 60.613 55.000 0.00 0.00 0.00 5.19
4295 8894 1.304381 GGAGCATGGACAAAGGCCA 60.304 57.895 5.01 0.00 40.24 5.36
4296 8895 0.685458 GGAGCATGGACAAAGGCCAT 60.685 55.000 5.01 0.00 46.76 4.40
4299 8898 4.039042 ATGGACAAAGGCCATGGC 57.961 55.556 29.47 29.47 44.21 4.40
4300 8899 1.078891 ATGGACAAAGGCCATGGCA 59.921 52.632 36.56 15.35 44.21 4.92
4301 8900 0.974010 ATGGACAAAGGCCATGGCAG 60.974 55.000 36.56 24.18 44.21 4.85
4302 8901 2.575461 GACAAAGGCCATGGCAGC 59.425 61.111 36.56 21.21 44.11 5.25
4303 8902 2.203669 ACAAAGGCCATGGCAGCA 60.204 55.556 36.56 0.00 44.11 4.41
4304 8903 1.610554 GACAAAGGCCATGGCAGCAT 61.611 55.000 36.56 18.37 44.11 3.79
4305 8904 1.143183 CAAAGGCCATGGCAGCATC 59.857 57.895 36.56 19.69 44.11 3.91
4306 8905 1.001248 AAAGGCCATGGCAGCATCT 59.999 52.632 36.56 21.67 44.11 2.90
4307 8906 1.041447 AAAGGCCATGGCAGCATCTC 61.041 55.000 36.56 18.19 44.11 2.75
4308 8907 2.910994 GGCCATGGCAGCATCTCC 60.911 66.667 36.56 14.15 44.11 3.71
4309 8908 2.124024 GCCATGGCAGCATCTCCA 60.124 61.111 32.08 0.00 41.49 3.86
4310 8909 1.755395 GCCATGGCAGCATCTCCAA 60.755 57.895 32.08 0.00 41.49 3.53
4311 8910 1.735376 GCCATGGCAGCATCTCCAAG 61.735 60.000 32.08 0.00 41.49 3.61
4312 8911 0.106868 CCATGGCAGCATCTCCAAGA 60.107 55.000 0.00 0.00 35.75 3.02
4313 8912 1.683938 CCATGGCAGCATCTCCAAGAA 60.684 52.381 0.00 0.00 35.75 2.52
4314 8913 1.676529 CATGGCAGCATCTCCAAGAAG 59.323 52.381 0.00 0.00 35.75 2.85
4315 8914 0.034767 TGGCAGCATCTCCAAGAAGG 60.035 55.000 0.00 0.00 39.47 3.46
4316 8915 0.750911 GGCAGCATCTCCAAGAAGGG 60.751 60.000 0.00 0.00 38.24 3.95
4317 8916 0.750911 GCAGCATCTCCAAGAAGGGG 60.751 60.000 0.00 0.00 40.31 4.79
4323 8922 3.088923 CTCCAAGAAGGGGAGGACA 57.911 57.895 0.00 0.00 46.65 4.02
4324 8923 0.615850 CTCCAAGAAGGGGAGGACAC 59.384 60.000 0.00 0.00 46.65 3.67
4325 8924 0.840722 TCCAAGAAGGGGAGGACACC 60.841 60.000 0.00 0.00 40.50 4.16
4326 8925 1.296715 CAAGAAGGGGAGGACACCG 59.703 63.158 0.00 0.00 45.76 4.94
4327 8926 2.593956 AAGAAGGGGAGGACACCGC 61.594 63.158 0.00 0.00 45.76 5.68
4333 8932 4.767255 GGAGGACACCGCTGCCAG 62.767 72.222 0.00 0.00 0.00 4.85
4337 8936 3.058160 GACACCGCTGCCAGCATT 61.058 61.111 18.21 0.00 42.58 3.56
4338 8937 3.332493 GACACCGCTGCCAGCATTG 62.332 63.158 18.21 14.64 42.58 2.82
4357 8956 4.489771 CGAGCCGGGCAGGGATTT 62.490 66.667 23.09 0.00 41.48 2.17
4358 8957 2.517166 GAGCCGGGCAGGGATTTC 60.517 66.667 23.09 3.92 41.48 2.17
4359 8958 3.017581 AGCCGGGCAGGGATTTCT 61.018 61.111 23.09 0.00 41.48 2.52
4360 8959 2.517166 GCCGGGCAGGGATTTCTC 60.517 66.667 15.62 0.00 41.48 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.443323 TCTAATCTGCTATACACTCTGATAGTC 57.557 37.037 0.00 0.00 35.76 2.59
60 61 5.619086 GCTTCAACACGCTGTGGTATTATTT 60.619 40.000 12.18 0.00 37.94 1.40
62 63 3.374058 GCTTCAACACGCTGTGGTATTAT 59.626 43.478 12.18 0.00 37.94 1.28
63 64 2.739913 GCTTCAACACGCTGTGGTATTA 59.260 45.455 12.18 0.00 37.94 0.98
64 65 1.535462 GCTTCAACACGCTGTGGTATT 59.465 47.619 12.18 0.00 37.94 1.89
65 66 1.156736 GCTTCAACACGCTGTGGTAT 58.843 50.000 12.18 0.00 37.94 2.73
66 67 0.179070 TGCTTCAACACGCTGTGGTA 60.179 50.000 12.18 0.00 37.94 3.25
67 68 1.029408 TTGCTTCAACACGCTGTGGT 61.029 50.000 12.18 3.84 37.94 4.16
436 4088 8.917655 GGTAAATTTACATTGCACATTTACGTT 58.082 29.630 25.59 0.00 39.58 3.99
490 4142 3.632604 GGAGGAGACATATCAGACAACGA 59.367 47.826 0.00 0.00 0.00 3.85
503 4155 4.422073 AATTTATGATGCGGAGGAGACA 57.578 40.909 0.00 0.00 0.00 3.41
606 4258 9.604626 GCATTGCATTTATTTCTACTAGCTAAG 57.395 33.333 3.15 0.00 0.00 2.18
607 4259 8.282592 CGCATTGCATTTATTTCTACTAGCTAA 58.717 33.333 9.69 0.00 0.00 3.09
608 4260 7.441157 ACGCATTGCATTTATTTCTACTAGCTA 59.559 33.333 9.69 0.00 0.00 3.32
609 4261 6.260936 ACGCATTGCATTTATTTCTACTAGCT 59.739 34.615 9.69 0.00 0.00 3.32
610 4262 6.430451 ACGCATTGCATTTATTTCTACTAGC 58.570 36.000 9.69 0.00 0.00 3.42
611 4263 7.041780 AGGACGCATTGCATTTATTTCTACTAG 60.042 37.037 9.69 0.00 0.00 2.57
612 4264 6.765989 AGGACGCATTGCATTTATTTCTACTA 59.234 34.615 9.69 0.00 0.00 1.82
613 4265 5.590259 AGGACGCATTGCATTTATTTCTACT 59.410 36.000 9.69 0.00 0.00 2.57
614 4266 5.821204 AGGACGCATTGCATTTATTTCTAC 58.179 37.500 9.69 0.00 0.00 2.59
615 4267 7.561021 TTAGGACGCATTGCATTTATTTCTA 57.439 32.000 9.69 0.00 0.00 2.10
616 4268 4.989279 AGGACGCATTGCATTTATTTCT 57.011 36.364 9.69 0.00 0.00 2.52
617 4269 6.019881 GGTTTAGGACGCATTGCATTTATTTC 60.020 38.462 9.69 0.00 0.00 2.17
618 4270 5.810074 GGTTTAGGACGCATTGCATTTATTT 59.190 36.000 9.69 0.00 0.00 1.40
619 4271 5.127031 AGGTTTAGGACGCATTGCATTTATT 59.873 36.000 9.69 0.00 0.00 1.40
620 4272 4.644685 AGGTTTAGGACGCATTGCATTTAT 59.355 37.500 9.69 0.00 0.00 1.40
621 4273 4.013728 AGGTTTAGGACGCATTGCATTTA 58.986 39.130 9.69 0.00 0.00 1.40
622 4274 2.825532 AGGTTTAGGACGCATTGCATTT 59.174 40.909 9.69 0.00 0.00 2.32
623 4275 2.446435 AGGTTTAGGACGCATTGCATT 58.554 42.857 9.69 0.00 0.00 3.56
624 4276 2.128771 AGGTTTAGGACGCATTGCAT 57.871 45.000 9.69 0.00 0.00 3.96
625 4277 1.539388 CAAGGTTTAGGACGCATTGCA 59.461 47.619 9.69 0.00 0.00 4.08
626 4278 1.539827 ACAAGGTTTAGGACGCATTGC 59.460 47.619 0.00 0.00 0.00 3.56
627 4279 3.074412 AGACAAGGTTTAGGACGCATTG 58.926 45.455 0.00 0.00 0.00 2.82
628 4280 3.418684 AGACAAGGTTTAGGACGCATT 57.581 42.857 0.00 0.00 0.00 3.56
629 4281 4.755266 ATAGACAAGGTTTAGGACGCAT 57.245 40.909 0.00 0.00 0.00 4.73
630 4282 4.546829 AATAGACAAGGTTTAGGACGCA 57.453 40.909 0.00 0.00 0.00 5.24
631 4283 5.465724 CCATAATAGACAAGGTTTAGGACGC 59.534 44.000 0.00 0.00 0.00 5.19
632 4284 6.812998 TCCATAATAGACAAGGTTTAGGACG 58.187 40.000 0.00 0.00 0.00 4.79
633 4285 9.628500 ATTTCCATAATAGACAAGGTTTAGGAC 57.372 33.333 0.00 0.00 0.00 3.85
634 4286 9.627123 CATTTCCATAATAGACAAGGTTTAGGA 57.373 33.333 0.00 0.00 0.00 2.94
635 4287 8.352942 GCATTTCCATAATAGACAAGGTTTAGG 58.647 37.037 0.00 0.00 0.00 2.69
636 4288 8.902806 TGCATTTCCATAATAGACAAGGTTTAG 58.097 33.333 0.00 0.00 0.00 1.85
637 4289 8.682710 GTGCATTTCCATAATAGACAAGGTTTA 58.317 33.333 0.00 0.00 0.00 2.01
638 4290 7.547227 GTGCATTTCCATAATAGACAAGGTTT 58.453 34.615 0.00 0.00 0.00 3.27
639 4291 6.183360 CGTGCATTTCCATAATAGACAAGGTT 60.183 38.462 0.00 0.00 0.00 3.50
640 4292 5.296780 CGTGCATTTCCATAATAGACAAGGT 59.703 40.000 0.00 0.00 0.00 3.50
641 4293 5.751680 CGTGCATTTCCATAATAGACAAGG 58.248 41.667 0.00 0.00 0.00 3.61
642 4294 5.207768 GCGTGCATTTCCATAATAGACAAG 58.792 41.667 0.00 0.00 0.00 3.16
643 4295 4.637977 TGCGTGCATTTCCATAATAGACAA 59.362 37.500 0.00 0.00 0.00 3.18
644 4296 4.195416 TGCGTGCATTTCCATAATAGACA 58.805 39.130 0.00 0.00 0.00 3.41
645 4297 4.811555 TGCGTGCATTTCCATAATAGAC 57.188 40.909 0.00 0.00 0.00 2.59
646 4298 5.826601 TTTGCGTGCATTTCCATAATAGA 57.173 34.783 0.00 0.00 0.00 1.98
647 4299 7.467557 AAATTTGCGTGCATTTCCATAATAG 57.532 32.000 0.00 0.00 0.00 1.73
648 4300 8.812329 GTTAAATTTGCGTGCATTTCCATAATA 58.188 29.630 0.00 0.00 0.00 0.98
649 4301 7.201600 GGTTAAATTTGCGTGCATTTCCATAAT 60.202 33.333 0.00 0.00 0.00 1.28
650 4302 6.091441 GGTTAAATTTGCGTGCATTTCCATAA 59.909 34.615 0.00 0.00 0.00 1.90
651 4303 5.578727 GGTTAAATTTGCGTGCATTTCCATA 59.421 36.000 0.00 0.00 0.00 2.74
652 4304 4.391523 GGTTAAATTTGCGTGCATTTCCAT 59.608 37.500 0.00 0.00 0.00 3.41
653 4305 3.743396 GGTTAAATTTGCGTGCATTTCCA 59.257 39.130 0.00 0.00 0.00 3.53
654 4306 3.181535 CGGTTAAATTTGCGTGCATTTCC 60.182 43.478 0.00 0.00 0.00 3.13
655 4307 3.427193 ACGGTTAAATTTGCGTGCATTTC 59.573 39.130 0.00 0.00 0.00 2.17
656 4308 3.183373 CACGGTTAAATTTGCGTGCATTT 59.817 39.130 0.00 0.00 0.00 2.32
657 4309 2.728839 CACGGTTAAATTTGCGTGCATT 59.271 40.909 0.00 0.00 0.00 3.56
658 4310 2.323959 CACGGTTAAATTTGCGTGCAT 58.676 42.857 0.00 0.00 0.00 3.96
659 4311 1.759994 CACGGTTAAATTTGCGTGCA 58.240 45.000 0.00 0.00 0.00 4.57
660 4312 0.433115 GCACGGTTAAATTTGCGTGC 59.567 50.000 3.85 3.85 44.02 5.34
661 4313 1.056869 GGCACGGTTAAATTTGCGTG 58.943 50.000 0.00 0.00 35.74 5.34
662 4314 0.955905 AGGCACGGTTAAATTTGCGT 59.044 45.000 0.00 0.00 35.74 5.24
663 4315 1.982913 GAAGGCACGGTTAAATTTGCG 59.017 47.619 0.00 0.00 35.74 4.85
664 4316 3.297830 AGAAGGCACGGTTAAATTTGC 57.702 42.857 0.00 0.00 0.00 3.68
665 4317 6.362283 CAGTTTAGAAGGCACGGTTAAATTTG 59.638 38.462 0.00 0.00 0.00 2.32
666 4318 6.040054 ACAGTTTAGAAGGCACGGTTAAATTT 59.960 34.615 0.00 0.00 0.00 1.82
667 4319 5.533528 ACAGTTTAGAAGGCACGGTTAAATT 59.466 36.000 0.00 0.00 0.00 1.82
668 4320 5.048991 CACAGTTTAGAAGGCACGGTTAAAT 60.049 40.000 0.00 0.00 0.00 1.40
669 4321 4.273969 CACAGTTTAGAAGGCACGGTTAAA 59.726 41.667 0.00 0.00 0.00 1.52
670 4322 3.810941 CACAGTTTAGAAGGCACGGTTAA 59.189 43.478 0.00 0.00 0.00 2.01
671 4323 3.069872 TCACAGTTTAGAAGGCACGGTTA 59.930 43.478 0.00 0.00 0.00 2.85
672 4324 2.158871 TCACAGTTTAGAAGGCACGGTT 60.159 45.455 0.00 0.00 0.00 4.44
673 4325 1.414919 TCACAGTTTAGAAGGCACGGT 59.585 47.619 0.00 0.00 0.00 4.83
674 4326 1.798813 GTCACAGTTTAGAAGGCACGG 59.201 52.381 0.00 0.00 0.00 4.94
675 4327 1.455786 CGTCACAGTTTAGAAGGCACG 59.544 52.381 0.00 0.00 0.00 5.34
676 4328 1.798813 CCGTCACAGTTTAGAAGGCAC 59.201 52.381 0.00 0.00 0.00 5.01
677 4329 1.689813 TCCGTCACAGTTTAGAAGGCA 59.310 47.619 0.00 0.00 34.05 4.75
678 4330 2.338500 CTCCGTCACAGTTTAGAAGGC 58.662 52.381 0.00 0.00 34.05 4.35
679 4331 2.353803 CCCTCCGTCACAGTTTAGAAGG 60.354 54.545 0.00 0.00 35.14 3.46
680 4332 2.561419 TCCCTCCGTCACAGTTTAGAAG 59.439 50.000 0.00 0.00 0.00 2.85
681 4333 2.561419 CTCCCTCCGTCACAGTTTAGAA 59.439 50.000 0.00 0.00 0.00 2.10
682 4334 2.168496 CTCCCTCCGTCACAGTTTAGA 58.832 52.381 0.00 0.00 0.00 2.10
683 4335 1.893801 ACTCCCTCCGTCACAGTTTAG 59.106 52.381 0.00 0.00 0.00 1.85
684 4336 2.005370 ACTCCCTCCGTCACAGTTTA 57.995 50.000 0.00 0.00 0.00 2.01
685 4337 2.005370 TACTCCCTCCGTCACAGTTT 57.995 50.000 0.00 0.00 0.00 2.66
686 4338 2.100989 GATACTCCCTCCGTCACAGTT 58.899 52.381 0.00 0.00 0.00 3.16
687 4339 1.005569 TGATACTCCCTCCGTCACAGT 59.994 52.381 0.00 0.00 0.00 3.55
688 4340 1.763968 TGATACTCCCTCCGTCACAG 58.236 55.000 0.00 0.00 0.00 3.66
689 4341 2.225382 TTGATACTCCCTCCGTCACA 57.775 50.000 0.00 0.00 0.00 3.58
690 4342 3.821421 ATTTGATACTCCCTCCGTCAC 57.179 47.619 0.00 0.00 0.00 3.67
691 4343 4.837093 AAATTTGATACTCCCTCCGTCA 57.163 40.909 0.00 0.00 0.00 4.35
692 4344 4.941873 ACAAAATTTGATACTCCCTCCGTC 59.058 41.667 13.19 0.00 0.00 4.79
693 4345 4.918588 ACAAAATTTGATACTCCCTCCGT 58.081 39.130 13.19 0.00 0.00 4.69
694 4346 6.073765 CGATACAAAATTTGATACTCCCTCCG 60.074 42.308 13.19 0.00 0.00 4.63
695 4347 6.990349 TCGATACAAAATTTGATACTCCCTCC 59.010 38.462 13.19 0.00 0.00 4.30
696 4348 8.433421 TTCGATACAAAATTTGATACTCCCTC 57.567 34.615 13.19 0.00 0.00 4.30
697 4349 8.801882 TTTCGATACAAAATTTGATACTCCCT 57.198 30.769 13.19 0.00 0.00 4.20
698 4350 8.674607 ACTTTCGATACAAAATTTGATACTCCC 58.325 33.333 13.19 0.00 0.00 4.30
716 4368 4.117685 GCACTTTCCCGTATACTTTCGAT 58.882 43.478 0.56 0.00 0.00 3.59
724 4376 5.607477 CCTAGAATTGCACTTTCCCGTATA 58.393 41.667 5.22 0.00 0.00 1.47
787 4439 2.165845 CCCGATTCTTACTTCTCACGGT 59.834 50.000 0.00 0.00 37.87 4.83
794 4446 5.857517 CGTATCTTAGCCCGATTCTTACTTC 59.142 44.000 0.00 0.00 0.00 3.01
798 4450 4.147321 ACCGTATCTTAGCCCGATTCTTA 58.853 43.478 0.00 0.00 0.00 2.10
803 4455 0.879765 CGACCGTATCTTAGCCCGAT 59.120 55.000 0.00 0.00 0.00 4.18
806 4458 1.135746 CGATCGACCGTATCTTAGCCC 60.136 57.143 10.26 0.00 0.00 5.19
816 4468 2.025418 GGTTTGCACGATCGACCGT 61.025 57.895 24.34 0.00 44.43 4.83
855 4507 2.048222 CACGCGAGAGAAAGGCCA 60.048 61.111 15.93 0.00 0.00 5.36
951 4603 2.203567 CCTAGGAGAGCGGAGGGG 60.204 72.222 1.05 0.00 0.00 4.79
962 4614 2.044252 AGCGAGCGAACCCTAGGA 60.044 61.111 11.48 0.00 0.00 2.94
978 4630 4.421479 AGCGAACCTGGCGACGAG 62.421 66.667 0.00 0.00 35.00 4.18
979 4631 4.415332 GAGCGAACCTGGCGACGA 62.415 66.667 0.00 0.00 35.00 4.20
1304 4980 3.626217 CACAGAGGTCCATGATGTGATTG 59.374 47.826 9.10 0.00 43.02 2.67
1307 4983 2.498885 CTCACAGAGGTCCATGATGTGA 59.501 50.000 14.17 14.17 45.80 3.58
1477 5154 3.584848 AGATCTGTATCATACCCCAAGCC 59.415 47.826 0.00 0.00 34.28 4.35
1504 5181 0.900182 GGAAACAGGGGAAGCAAGGG 60.900 60.000 0.00 0.00 0.00 3.95
1535 5212 4.466567 TGACAACTACGACAATTGCAAG 57.533 40.909 4.94 0.00 0.00 4.01
1544 5221 8.166706 CCTTACATTAACAATGACAACTACGAC 58.833 37.037 5.92 0.00 41.46 4.34
1545 5222 7.332430 CCCTTACATTAACAATGACAACTACGA 59.668 37.037 5.92 0.00 41.46 3.43
1587 5291 2.617308 CCAATACCAGATTGAGCAGCTG 59.383 50.000 10.11 10.11 0.00 4.24
1614 5318 8.862325 TTCTAAGAACACACCAATATTCACAT 57.138 30.769 0.00 0.00 0.00 3.21
1657 5361 3.259064 GCTAATAAAGCCACGACAGACA 58.741 45.455 0.00 0.00 46.25 3.41
1678 5382 7.767198 TCTCCAATAGTTAAACCTATGAAACCG 59.233 37.037 0.00 0.00 0.00 4.44
1714 5418 1.600957 CGTCAGGCATCAGCAAATAGG 59.399 52.381 0.00 0.00 44.61 2.57
1775 5483 3.306703 CACAGCAACACAAATCAACCAAC 59.693 43.478 0.00 0.00 0.00 3.77
1783 5492 5.964958 ATTAGTAGCACAGCAACACAAAT 57.035 34.783 0.00 0.00 0.00 2.32
1786 5495 7.447374 AAATAATTAGTAGCACAGCAACACA 57.553 32.000 0.00 0.00 0.00 3.72
1811 5520 7.361542 GCTCACATCAGACAAACAATATTGAGT 60.362 37.037 22.16 15.69 34.38 3.41
1822 5531 3.213206 ACAAGGCTCACATCAGACAAA 57.787 42.857 0.00 0.00 0.00 2.83
1877 5588 3.917300 TGGAAACCATGTAAACCCAAGT 58.083 40.909 0.00 0.00 0.00 3.16
1898 5609 6.070309 TGCCAAATAAGTAAATTCCCTTGCAT 60.070 34.615 0.00 0.00 0.00 3.96
1931 5642 6.931840 TGTACATAACACATACACAGCTTCAA 59.068 34.615 0.00 0.00 31.43 2.69
1940 5651 7.856145 TCATTGCATGTACATAACACATACA 57.144 32.000 8.32 0.00 42.09 2.29
1985 5696 3.539604 AGCATCAGATGTAACTTCAGCC 58.460 45.455 12.18 0.00 0.00 4.85
2044 5756 4.922206 TCCTCCACAGCACAATCTATTTT 58.078 39.130 0.00 0.00 0.00 1.82
2047 5759 4.785346 AATCCTCCACAGCACAATCTAT 57.215 40.909 0.00 0.00 0.00 1.98
2052 5764 3.193267 GCAATTAATCCTCCACAGCACAA 59.807 43.478 0.00 0.00 0.00 3.33
2069 5781 6.646267 ACTGGCAAATCATTATCAAGCAATT 58.354 32.000 0.00 0.00 0.00 2.32
2070 5782 6.229936 ACTGGCAAATCATTATCAAGCAAT 57.770 33.333 0.00 0.00 0.00 3.56
2076 5788 5.006261 CGTTACGACTGGCAAATCATTATCA 59.994 40.000 0.00 0.00 0.00 2.15
2077 5789 5.432157 CGTTACGACTGGCAAATCATTATC 58.568 41.667 0.00 0.00 0.00 1.75
2078 5790 4.260620 GCGTTACGACTGGCAAATCATTAT 60.261 41.667 9.62 0.00 0.00 1.28
2079 5791 3.062909 GCGTTACGACTGGCAAATCATTA 59.937 43.478 9.62 0.00 0.00 1.90
2080 5792 2.159572 GCGTTACGACTGGCAAATCATT 60.160 45.455 9.62 0.00 0.00 2.57
2081 5793 1.396996 GCGTTACGACTGGCAAATCAT 59.603 47.619 9.62 0.00 0.00 2.45
2082 5794 0.793861 GCGTTACGACTGGCAAATCA 59.206 50.000 9.62 0.00 0.00 2.57
2083 5795 0.096454 GGCGTTACGACTGGCAAATC 59.904 55.000 9.62 0.00 0.00 2.17
2084 5796 0.604243 TGGCGTTACGACTGGCAAAT 60.604 50.000 13.10 0.00 35.04 2.32
2085 5797 0.604243 ATGGCGTTACGACTGGCAAA 60.604 50.000 13.10 0.00 37.95 3.68
2086 5798 1.004320 ATGGCGTTACGACTGGCAA 60.004 52.632 13.10 0.00 37.95 4.52
2087 5799 1.739929 CATGGCGTTACGACTGGCA 60.740 57.895 13.10 0.00 38.45 4.92
2088 5800 3.089784 CATGGCGTTACGACTGGC 58.910 61.111 13.10 0.00 35.04 4.85
2089 5801 1.421410 GAGCATGGCGTTACGACTGG 61.421 60.000 13.10 4.86 35.04 4.00
2116 5828 4.508124 GGAAGTGATGTTAGATAAGCACCG 59.492 45.833 0.00 0.00 0.00 4.94
2117 5829 5.428253 TGGAAGTGATGTTAGATAAGCACC 58.572 41.667 0.00 0.00 0.00 5.01
2128 5840 9.691362 GTAAAACAACAATATGGAAGTGATGTT 57.309 29.630 0.00 0.00 39.17 2.71
2129 5841 9.077885 AGTAAAACAACAATATGGAAGTGATGT 57.922 29.630 0.00 0.00 30.51 3.06
2130 5842 9.559958 GAGTAAAACAACAATATGGAAGTGATG 57.440 33.333 0.00 0.00 0.00 3.07
2131 5843 8.450964 CGAGTAAAACAACAATATGGAAGTGAT 58.549 33.333 0.00 0.00 0.00 3.06
2132 5844 7.442969 ACGAGTAAAACAACAATATGGAAGTGA 59.557 33.333 0.00 0.00 0.00 3.41
2133 5845 7.581476 ACGAGTAAAACAACAATATGGAAGTG 58.419 34.615 0.00 0.00 0.00 3.16
2139 5851 8.849490 CAATCCAACGAGTAAAACAACAATATG 58.151 33.333 0.00 0.00 0.00 1.78
2140 5852 8.573035 ACAATCCAACGAGTAAAACAACAATAT 58.427 29.630 0.00 0.00 0.00 1.28
2143 5855 6.030849 CACAATCCAACGAGTAAAACAACAA 58.969 36.000 0.00 0.00 0.00 2.83
2145 5857 4.973663 CCACAATCCAACGAGTAAAACAAC 59.026 41.667 0.00 0.00 0.00 3.32
2157 5869 4.023291 ACATCCCAATACCACAATCCAAC 58.977 43.478 0.00 0.00 0.00 3.77
2161 5873 2.958355 CCCACATCCCAATACCACAATC 59.042 50.000 0.00 0.00 0.00 2.67
2174 5886 1.059913 CAGGATAGTCCCCCACATCC 58.940 60.000 0.00 0.00 37.19 3.51
2175 5887 1.059913 CCAGGATAGTCCCCCACATC 58.940 60.000 0.00 0.00 37.19 3.06
2176 5888 1.062488 GCCAGGATAGTCCCCCACAT 61.062 60.000 0.00 0.00 37.19 3.21
2177 5889 1.692749 GCCAGGATAGTCCCCCACA 60.693 63.158 0.00 0.00 37.19 4.17
2178 5890 2.808206 CGCCAGGATAGTCCCCCAC 61.808 68.421 0.00 0.00 37.19 4.61
2184 5897 4.073549 AGACTACATACGCCAGGATAGTC 58.926 47.826 0.00 0.00 39.09 2.59
2213 5926 4.040461 GGATGCTGGTTTACTATGAGGCTA 59.960 45.833 0.00 0.00 0.00 3.93
2215 5928 3.142174 GGATGCTGGTTTACTATGAGGC 58.858 50.000 0.00 0.00 0.00 4.70
2220 5933 8.766994 ATAACAAATGGATGCTGGTTTACTAT 57.233 30.769 0.00 0.00 0.00 2.12
2229 5942 8.680903 AGACTTCTAAATAACAAATGGATGCTG 58.319 33.333 0.00 0.00 0.00 4.41
2245 5958 7.657761 GTCAGTCTCCAATTGAAGACTTCTAAA 59.342 37.037 23.27 5.73 39.33 1.85
2247 5960 6.267699 TGTCAGTCTCCAATTGAAGACTTCTA 59.732 38.462 23.27 10.29 39.33 2.10
2248 5961 5.070981 TGTCAGTCTCCAATTGAAGACTTCT 59.929 40.000 23.27 1.92 39.33 2.85
2249 5962 5.300752 TGTCAGTCTCCAATTGAAGACTTC 58.699 41.667 23.27 18.54 39.33 3.01
2250 5963 5.163258 ACTGTCAGTCTCCAATTGAAGACTT 60.163 40.000 23.27 7.33 39.33 3.01
2251 5964 4.346418 ACTGTCAGTCTCCAATTGAAGACT 59.654 41.667 20.54 20.54 41.70 3.24
2262 5975 3.735237 TTCAAGTCACTGTCAGTCTCC 57.265 47.619 1.37 0.00 0.00 3.71
2263 5976 6.926272 AGTAAATTCAAGTCACTGTCAGTCTC 59.074 38.462 1.37 0.00 0.00 3.36
2380 6253 3.070015 ACCTTCCTTTTGCAATCAACAGG 59.930 43.478 0.00 6.46 46.54 4.00
2413 6286 6.442513 AGTCATTTGCCTATCTTGTTAAGC 57.557 37.500 0.00 0.00 0.00 3.09
2493 6368 4.510340 CACACAGTTAACGCCTAGAGTTTT 59.490 41.667 8.47 0.00 33.42 2.43
2497 6372 3.299340 ACACACAGTTAACGCCTAGAG 57.701 47.619 0.00 0.00 0.00 2.43
2498 6373 3.738830 AACACACAGTTAACGCCTAGA 57.261 42.857 0.00 0.00 39.09 2.43
2499 6374 4.523813 CAAAACACACAGTTAACGCCTAG 58.476 43.478 0.00 0.00 40.26 3.02
2500 6375 3.242804 GCAAAACACACAGTTAACGCCTA 60.243 43.478 0.00 0.00 40.26 3.93
2503 6383 1.849829 GGCAAAACACACAGTTAACGC 59.150 47.619 0.00 0.00 40.26 4.84
2598 6478 1.156645 GCATGCCTAGGAGTGCGAAG 61.157 60.000 14.75 0.00 0.00 3.79
2599 6479 1.153369 GCATGCCTAGGAGTGCGAA 60.153 57.895 14.75 0.00 0.00 4.70
2615 6495 3.054948 AGGCGTAACCATAGTTAAAGGCA 60.055 43.478 13.37 0.00 41.88 4.75
2654 6537 7.654022 AGTCCTTTCAAGTTCAAACCAAATA 57.346 32.000 0.00 0.00 0.00 1.40
2698 6581 2.626840 GAGACTGAAGTCCAAGCCATC 58.373 52.381 6.84 0.00 45.85 3.51
2727 6610 9.786105 CAAAAATAAAAACTCAACTGGCAATTT 57.214 25.926 0.00 0.00 0.00 1.82
2747 6630 6.365789 CAGGTATTGACATTGTTCGCAAAAAT 59.634 34.615 0.00 0.00 40.90 1.82
2751 6634 4.068599 TCAGGTATTGACATTGTTCGCAA 58.931 39.130 0.00 0.00 41.87 4.85
2752 6635 3.669536 TCAGGTATTGACATTGTTCGCA 58.330 40.909 0.00 0.00 0.00 5.10
2753 6636 3.684788 ACTCAGGTATTGACATTGTTCGC 59.315 43.478 0.00 0.00 0.00 4.70
2754 6637 4.929211 TGACTCAGGTATTGACATTGTTCG 59.071 41.667 0.00 0.00 0.00 3.95
2787 6695 8.454106 ACAAGAAATTACCTCAGATCAATTTCG 58.546 33.333 15.46 8.97 45.49 3.46
2815 6723 5.220835 CGCAATGCAGTCCTAAACATGATAA 60.221 40.000 5.91 0.00 0.00 1.75
2816 6724 4.273235 CGCAATGCAGTCCTAAACATGATA 59.727 41.667 5.91 0.00 0.00 2.15
2884 6824 7.301054 CACACATGGAAAGATCAAGAAACTAC 58.699 38.462 0.00 0.00 0.00 2.73
2926 6866 5.712152 AAATGCAGGCTTGGTATTATAGC 57.288 39.130 0.00 0.00 0.00 2.97
2939 6879 1.273048 TGATGTGGTCAAAATGCAGGC 59.727 47.619 0.00 0.00 32.78 4.85
2940 6880 2.673043 GCTGATGTGGTCAAAATGCAGG 60.673 50.000 0.00 0.00 36.14 4.85
2953 6894 7.547019 TGTCTAAATGAGTAAGAAGCTGATGTG 59.453 37.037 0.00 0.00 0.00 3.21
3082 7032 2.846039 GCAATCCTCTGCAACATGAG 57.154 50.000 0.00 0.00 42.17 2.90
3121 7072 7.733402 AACTTAACTCGGTTAATAGCAAACA 57.267 32.000 8.90 0.00 37.37 2.83
3294 7248 7.433425 GCAATGCAAAATAGAACTTCAGGATAC 59.567 37.037 0.00 0.00 0.00 2.24
3386 7341 4.689345 ACTAAAGTACGACAACCATGAAGC 59.311 41.667 0.00 0.00 0.00 3.86
3491 7446 4.248859 CTGAACAGTACTCCACAAGGATG 58.751 47.826 0.00 0.00 44.70 3.51
3500 7455 3.326747 ACGATTTGCTGAACAGTACTCC 58.673 45.455 0.00 0.00 0.00 3.85
3563 7518 4.142038 AGTACCCACCAAATTCACACTTC 58.858 43.478 0.00 0.00 0.00 3.01
3623 7578 4.572795 TGTCACTGAAAATAAGCACGACAA 59.427 37.500 0.00 0.00 0.00 3.18
3688 7653 8.979574 CAGAGGGAGTATATGTTAAAAACGATC 58.020 37.037 0.00 0.00 0.00 3.69
3722 7691 9.588096 GAAATATAAGATTGTTTACAGGGGGAT 57.412 33.333 0.00 0.00 0.00 3.85
3723 7692 8.787818 AGAAATATAAGATTGTTTACAGGGGGA 58.212 33.333 0.00 0.00 0.00 4.81
3724 7693 8.996651 AGAAATATAAGATTGTTTACAGGGGG 57.003 34.615 0.00 0.00 0.00 5.40
3738 7707 8.589338 GCACTCCCTCTATGAAGAAATATAAGA 58.411 37.037 0.00 0.00 0.00 2.10
3739 7708 8.370940 TGCACTCCCTCTATGAAGAAATATAAG 58.629 37.037 0.00 0.00 0.00 1.73
3740 7709 8.262601 TGCACTCCCTCTATGAAGAAATATAA 57.737 34.615 0.00 0.00 0.00 0.98
3741 7710 7.855784 TGCACTCCCTCTATGAAGAAATATA 57.144 36.000 0.00 0.00 0.00 0.86
3742 7711 6.753913 TGCACTCCCTCTATGAAGAAATAT 57.246 37.500 0.00 0.00 0.00 1.28
3743 7712 6.349300 GTTGCACTCCCTCTATGAAGAAATA 58.651 40.000 0.00 0.00 0.00 1.40
3744 7713 5.189180 GTTGCACTCCCTCTATGAAGAAAT 58.811 41.667 0.00 0.00 0.00 2.17
3745 7714 4.579869 GTTGCACTCCCTCTATGAAGAAA 58.420 43.478 0.00 0.00 0.00 2.52
3746 7715 3.368427 CGTTGCACTCCCTCTATGAAGAA 60.368 47.826 0.00 0.00 0.00 2.52
3747 7716 2.166459 CGTTGCACTCCCTCTATGAAGA 59.834 50.000 0.00 0.00 0.00 2.87
3748 7717 2.093973 ACGTTGCACTCCCTCTATGAAG 60.094 50.000 0.00 0.00 0.00 3.02
3749 7718 1.899814 ACGTTGCACTCCCTCTATGAA 59.100 47.619 0.00 0.00 0.00 2.57
3750 7719 1.557099 ACGTTGCACTCCCTCTATGA 58.443 50.000 0.00 0.00 0.00 2.15
3751 7720 2.688446 TCTACGTTGCACTCCCTCTATG 59.312 50.000 0.00 0.00 0.00 2.23
3796 7765 4.994217 CCATAAATTTTGACCGGCAACTTT 59.006 37.500 0.00 11.37 35.91 2.66
3798 7767 3.576550 ACCATAAATTTTGACCGGCAACT 59.423 39.130 0.00 0.00 35.91 3.16
3799 7768 3.920446 ACCATAAATTTTGACCGGCAAC 58.080 40.909 0.00 0.00 35.91 4.17
3801 7770 4.608948 AAACCATAAATTTTGACCGGCA 57.391 36.364 0.00 0.00 0.00 5.69
3802 7771 5.927115 TGTTAAACCATAAATTTTGACCGGC 59.073 36.000 0.00 0.00 0.00 6.13
3820 7793 8.447053 GTTGTTGCTCCTCAAATTTTTGTTAAA 58.553 29.630 3.18 0.00 39.18 1.52
3821 7794 7.604164 TGTTGTTGCTCCTCAAATTTTTGTTAA 59.396 29.630 3.18 0.00 39.18 2.01
3822 7795 7.099764 TGTTGTTGCTCCTCAAATTTTTGTTA 58.900 30.769 3.18 0.00 39.18 2.41
3823 7796 5.936956 TGTTGTTGCTCCTCAAATTTTTGTT 59.063 32.000 3.18 0.00 39.18 2.83
3825 7798 6.419980 TTGTTGTTGCTCCTCAAATTTTTG 57.580 33.333 0.00 0.00 36.26 2.44
3836 8103 1.336755 ACCGTGAATTGTTGTTGCTCC 59.663 47.619 0.00 0.00 0.00 4.70
3837 8104 2.650608 GACCGTGAATTGTTGTTGCTC 58.349 47.619 0.00 0.00 0.00 4.26
3838 8105 1.002900 CGACCGTGAATTGTTGTTGCT 60.003 47.619 0.00 0.00 0.00 3.91
3839 8106 1.268335 ACGACCGTGAATTGTTGTTGC 60.268 47.619 0.00 0.00 0.00 4.17
3841 8108 2.557317 AGACGACCGTGAATTGTTGTT 58.443 42.857 0.00 0.00 0.00 2.83
3843 8110 3.288242 CAAAGACGACCGTGAATTGTTG 58.712 45.455 0.00 0.00 0.00 3.33
3844 8111 2.289547 CCAAAGACGACCGTGAATTGTT 59.710 45.455 0.00 0.00 0.00 2.83
3846 8113 1.871039 ACCAAAGACGACCGTGAATTG 59.129 47.619 0.00 2.68 0.00 2.32
3848 8115 1.792006 GACCAAAGACGACCGTGAAT 58.208 50.000 0.00 0.00 0.00 2.57
3851 8118 2.654912 GCGACCAAAGACGACCGTG 61.655 63.158 0.00 0.00 32.72 4.94
3852 8119 2.355481 GCGACCAAAGACGACCGT 60.355 61.111 0.00 0.00 32.72 4.83
3853 8120 1.615107 GAAGCGACCAAAGACGACCG 61.615 60.000 0.00 0.00 32.72 4.79
3854 8121 1.615107 CGAAGCGACCAAAGACGACC 61.615 60.000 0.00 0.00 32.72 4.79
3857 8124 0.161024 GTTCGAAGCGACCAAAGACG 59.839 55.000 0.00 0.00 34.89 4.18
3858 8125 1.070776 GTGTTCGAAGCGACCAAAGAC 60.071 52.381 0.00 0.00 34.89 3.01
3859 8126 1.214367 GTGTTCGAAGCGACCAAAGA 58.786 50.000 0.00 0.00 34.89 2.52
3862 8129 1.952133 CCGTGTTCGAAGCGACCAA 60.952 57.895 19.56 0.00 39.71 3.67
3864 8131 2.049802 TCCGTGTTCGAAGCGACC 60.050 61.111 19.56 0.18 39.71 4.79
3865 8132 0.938168 AAGTCCGTGTTCGAAGCGAC 60.938 55.000 19.56 15.38 39.71 5.19
3867 8134 1.487231 CAAGTCCGTGTTCGAAGCG 59.513 57.895 13.22 13.22 39.71 4.68
3868 8135 0.599204 TCCAAGTCCGTGTTCGAAGC 60.599 55.000 0.00 0.00 39.71 3.86
3869 8136 1.419374 CTCCAAGTCCGTGTTCGAAG 58.581 55.000 0.00 0.00 39.71 3.79
3870 8137 0.032952 CCTCCAAGTCCGTGTTCGAA 59.967 55.000 0.00 0.00 39.71 3.71
3871 8138 0.824595 TCCTCCAAGTCCGTGTTCGA 60.825 55.000 0.00 0.00 39.71 3.71
3872 8139 0.666577 GTCCTCCAAGTCCGTGTTCG 60.667 60.000 0.00 0.00 0.00 3.95
3874 8141 1.111116 TCGTCCTCCAAGTCCGTGTT 61.111 55.000 0.00 0.00 0.00 3.32
3876 8143 1.080705 GTCGTCCTCCAAGTCCGTG 60.081 63.158 0.00 0.00 0.00 4.94
3878 8145 1.605058 ATGGTCGTCCTCCAAGTCCG 61.605 60.000 0.00 0.00 38.52 4.79
3879 8146 0.108138 CATGGTCGTCCTCCAAGTCC 60.108 60.000 0.00 0.00 38.52 3.85
3881 8148 1.573108 ATCATGGTCGTCCTCCAAGT 58.427 50.000 0.00 0.00 38.52 3.16
3882 8149 2.283298 CAATCATGGTCGTCCTCCAAG 58.717 52.381 0.00 0.00 38.52 3.61
3884 8151 1.275666 ACAATCATGGTCGTCCTCCA 58.724 50.000 0.00 0.00 39.41 3.86
3885 8152 3.322254 AGATACAATCATGGTCGTCCTCC 59.678 47.826 0.00 0.00 34.23 4.30
3886 8153 4.202161 ACAGATACAATCATGGTCGTCCTC 60.202 45.833 0.00 0.00 34.23 3.71
3888 8155 3.804325 CACAGATACAATCATGGTCGTCC 59.196 47.826 0.00 0.00 0.00 4.79
3889 8156 4.433615 ACACAGATACAATCATGGTCGTC 58.566 43.478 0.00 0.00 0.00 4.20
3891 8158 5.985530 ACATACACAGATACAATCATGGTCG 59.014 40.000 0.00 0.00 0.00 4.79
3892 8159 8.144478 ACTACATACACAGATACAATCATGGTC 58.856 37.037 0.00 0.00 0.00 4.02
3894 8161 8.893219 AACTACATACACAGATACAATCATGG 57.107 34.615 0.00 0.00 0.00 3.66
3923 8190 8.757877 AGATACCCAAGCTTTGCATATTAAAAA 58.242 29.630 0.00 0.00 0.00 1.94
3924 8191 8.305046 AGATACCCAAGCTTTGCATATTAAAA 57.695 30.769 0.00 0.00 0.00 1.52
3925 8192 7.896383 AGATACCCAAGCTTTGCATATTAAA 57.104 32.000 0.00 0.00 0.00 1.52
3926 8193 7.896383 AAGATACCCAAGCTTTGCATATTAA 57.104 32.000 0.00 0.00 0.00 1.40
3927 8194 7.896383 AAAGATACCCAAGCTTTGCATATTA 57.104 32.000 0.00 0.00 31.21 0.98
3932 8531 3.894427 TGAAAAGATACCCAAGCTTTGCA 59.106 39.130 0.00 0.00 35.40 4.08
3961 8560 6.738635 TCCCTTGTACTCATCCTAACTCTTA 58.261 40.000 0.00 0.00 0.00 2.10
4013 8612 1.577328 AAGAACAATGCTCACGCCGG 61.577 55.000 0.00 0.00 34.43 6.13
4014 8613 0.453282 CAAGAACAATGCTCACGCCG 60.453 55.000 0.00 0.00 34.43 6.46
4018 8617 3.251729 TCTGCTTCAAGAACAATGCTCAC 59.748 43.478 0.00 0.00 0.00 3.51
4026 8625 4.313282 CATGTCTCTCTGCTTCAAGAACA 58.687 43.478 0.00 0.00 0.00 3.18
4032 8631 1.942776 TCCCATGTCTCTCTGCTTCA 58.057 50.000 0.00 0.00 0.00 3.02
4043 8642 1.838112 TGAACCAAGCATCCCATGTC 58.162 50.000 0.00 0.00 0.00 3.06
4049 8648 3.069443 TCCTTTGTTTGAACCAAGCATCC 59.931 43.478 2.99 0.00 34.82 3.51
4055 8654 6.071334 TGTGTTGTATCCTTTGTTTGAACCAA 60.071 34.615 0.00 0.00 0.00 3.67
4056 8655 5.419155 TGTGTTGTATCCTTTGTTTGAACCA 59.581 36.000 0.00 0.00 0.00 3.67
4057 8656 5.897050 TGTGTTGTATCCTTTGTTTGAACC 58.103 37.500 0.00 0.00 0.00 3.62
4059 8658 7.164230 AGTTGTGTTGTATCCTTTGTTTGAA 57.836 32.000 0.00 0.00 0.00 2.69
4060 8659 6.767524 AGTTGTGTTGTATCCTTTGTTTGA 57.232 33.333 0.00 0.00 0.00 2.69
4065 8664 6.560253 AGCTTAGTTGTGTTGTATCCTTTG 57.440 37.500 0.00 0.00 0.00 2.77
4067 8666 5.048713 GCAAGCTTAGTTGTGTTGTATCCTT 60.049 40.000 0.00 0.00 0.00 3.36
4084 8683 1.905354 GTCCTGGCAAGGCAAGCTT 60.905 57.895 0.56 0.00 44.11 3.74
4089 8688 2.853542 TGGAGTCCTGGCAAGGCA 60.854 61.111 11.33 0.00 44.11 4.75
4090 8689 2.045536 CTGGAGTCCTGGCAAGGC 60.046 66.667 11.33 0.00 44.11 4.35
4107 8706 3.548770 TCATCTCTTCACAATCCATGGC 58.451 45.455 6.96 0.00 0.00 4.40
4109 8708 5.293814 GTGTCTCATCTCTTCACAATCCATG 59.706 44.000 0.00 0.00 0.00 3.66
4110 8709 5.046087 TGTGTCTCATCTCTTCACAATCCAT 60.046 40.000 0.00 0.00 36.34 3.41
4111 8710 4.284234 TGTGTCTCATCTCTTCACAATCCA 59.716 41.667 0.00 0.00 36.34 3.41
4113 8712 5.293814 CCATGTGTCTCATCTCTTCACAATC 59.706 44.000 0.00 0.00 41.25 2.67
4114 8713 5.183969 CCATGTGTCTCATCTCTTCACAAT 58.816 41.667 0.00 0.00 41.25 2.71
4115 8714 4.040829 ACCATGTGTCTCATCTCTTCACAA 59.959 41.667 0.00 0.00 41.25 3.33
4116 8715 3.580022 ACCATGTGTCTCATCTCTTCACA 59.420 43.478 0.00 0.00 41.93 3.58
4117 8716 4.199432 ACCATGTGTCTCATCTCTTCAC 57.801 45.455 0.00 0.00 34.09 3.18
4118 8717 4.160439 GGTACCATGTGTCTCATCTCTTCA 59.840 45.833 7.15 0.00 34.09 3.02
4135 8734 4.682334 TGGCGAGGACCGGTACCA 62.682 66.667 15.00 10.89 39.04 3.25
4142 8741 2.737376 GTGTTCGTGGCGAGGACC 60.737 66.667 0.00 0.00 37.14 4.46
4144 8743 3.220999 CTGGTGTTCGTGGCGAGGA 62.221 63.158 0.00 0.00 37.14 3.71
4149 8748 3.050275 GCTCCTGGTGTTCGTGGC 61.050 66.667 0.00 0.00 0.00 5.01
4162 8761 2.035442 GCGTGAAGAAGGTGGCTCC 61.035 63.158 0.00 0.00 0.00 4.70
4178 8777 1.956170 GTATGGAGTCATGGCCGCG 60.956 63.158 0.00 0.00 34.96 6.46
4181 8780 1.071471 CGGGTATGGAGTCATGGCC 59.929 63.158 0.00 0.00 34.96 5.36
4186 8785 1.327690 GCCAGTCGGGTATGGAGTCA 61.328 60.000 0.00 0.00 39.02 3.41
4194 8793 1.550130 CCCTTCTTGCCAGTCGGGTA 61.550 60.000 6.15 0.00 39.65 3.69
4196 8795 2.045926 CCCTTCTTGCCAGTCGGG 60.046 66.667 1.04 1.04 40.85 5.14
4203 8802 1.574702 CGTCGGTTTCCCTTCTTGCC 61.575 60.000 0.00 0.00 0.00 4.52
4204 8803 1.866925 CGTCGGTTTCCCTTCTTGC 59.133 57.895 0.00 0.00 0.00 4.01
4205 8804 1.574702 GGCGTCGGTTTCCCTTCTTG 61.575 60.000 0.00 0.00 0.00 3.02
4206 8805 1.302271 GGCGTCGGTTTCCCTTCTT 60.302 57.895 0.00 0.00 0.00 2.52
4207 8806 1.838073 ATGGCGTCGGTTTCCCTTCT 61.838 55.000 0.00 0.00 0.00 2.85
4208 8807 1.366854 GATGGCGTCGGTTTCCCTTC 61.367 60.000 0.00 0.00 0.00 3.46
4209 8808 1.376812 GATGGCGTCGGTTTCCCTT 60.377 57.895 0.00 0.00 0.00 3.95
4210 8809 2.267961 GATGGCGTCGGTTTCCCT 59.732 61.111 0.00 0.00 0.00 4.20
4211 8810 3.192922 CGATGGCGTCGGTTTCCC 61.193 66.667 21.01 0.00 46.47 3.97
4221 8820 1.658717 GGATCAGACGACGATGGCG 60.659 63.158 0.00 0.00 44.79 5.69
4222 8821 1.658717 CGGATCAGACGACGATGGC 60.659 63.158 0.00 0.00 0.00 4.40
4223 8822 0.593618 ATCGGATCAGACGACGATGG 59.406 55.000 0.00 0.00 43.55 3.51
4225 8824 0.593618 CCATCGGATCAGACGACGAT 59.406 55.000 0.00 0.00 45.80 3.73
4226 8825 0.463116 TCCATCGGATCAGACGACGA 60.463 55.000 0.00 0.00 43.78 4.20
4227 8826 0.593618 ATCCATCGGATCAGACGACG 59.406 55.000 0.00 0.00 38.09 5.12
4228 8827 2.034685 TCAATCCATCGGATCAGACGAC 59.965 50.000 0.00 0.00 42.27 4.34
4229 8828 2.306847 TCAATCCATCGGATCAGACGA 58.693 47.619 0.00 0.00 42.27 4.20
4230 8829 2.800881 TCAATCCATCGGATCAGACG 57.199 50.000 0.00 0.00 42.27 4.18
4231 8830 4.635223 TGATTCAATCCATCGGATCAGAC 58.365 43.478 0.00 0.00 42.27 3.51
4232 8831 4.961438 TGATTCAATCCATCGGATCAGA 57.039 40.909 0.00 0.00 42.27 3.27
4233 8832 4.454847 CCTTGATTCAATCCATCGGATCAG 59.545 45.833 0.00 0.00 42.27 2.90
4234 8833 4.392047 CCTTGATTCAATCCATCGGATCA 58.608 43.478 0.00 0.00 42.27 2.92
4235 8834 3.755378 CCCTTGATTCAATCCATCGGATC 59.245 47.826 0.00 0.00 42.27 3.36
4236 8835 3.139025 ACCCTTGATTCAATCCATCGGAT 59.861 43.478 0.00 0.00 45.46 4.18
4237 8836 2.509548 ACCCTTGATTCAATCCATCGGA 59.490 45.455 0.00 0.00 35.55 4.55
4238 8837 2.936202 ACCCTTGATTCAATCCATCGG 58.064 47.619 0.00 0.00 0.00 4.18
4239 8838 4.989279 AAACCCTTGATTCAATCCATCG 57.011 40.909 0.00 0.00 0.00 3.84
4240 8839 5.395657 GGGAAAACCCTTGATTCAATCCATC 60.396 44.000 13.68 3.84 34.51 3.51
4241 8840 4.471025 GGGAAAACCCTTGATTCAATCCAT 59.529 41.667 13.68 0.00 34.51 3.41
4242 8841 3.837731 GGGAAAACCCTTGATTCAATCCA 59.162 43.478 13.68 0.00 34.51 3.41
4243 8842 3.119137 CGGGAAAACCCTTGATTCAATCC 60.119 47.826 0.00 3.01 34.99 3.01
4244 8843 3.761752 TCGGGAAAACCCTTGATTCAATC 59.238 43.478 0.00 0.00 34.99 2.67
4245 8844 3.773560 TCGGGAAAACCCTTGATTCAAT 58.226 40.909 0.00 0.00 34.99 2.57
4246 8845 3.231207 TCGGGAAAACCCTTGATTCAA 57.769 42.857 0.00 0.00 34.99 2.69
4247 8846 2.961531 TCGGGAAAACCCTTGATTCA 57.038 45.000 0.00 0.00 34.99 2.57
4248 8847 2.159240 GCATCGGGAAAACCCTTGATTC 60.159 50.000 0.00 0.00 34.99 2.52
4249 8848 1.824852 GCATCGGGAAAACCCTTGATT 59.175 47.619 0.00 0.00 34.99 2.57
4250 8849 1.005924 AGCATCGGGAAAACCCTTGAT 59.994 47.619 0.00 0.00 34.99 2.57
4251 8850 0.404040 AGCATCGGGAAAACCCTTGA 59.596 50.000 0.00 0.00 34.99 3.02
4252 8851 0.811281 GAGCATCGGGAAAACCCTTG 59.189 55.000 0.00 0.00 34.99 3.61
4253 8852 0.404040 TGAGCATCGGGAAAACCCTT 59.596 50.000 0.00 0.00 38.61 3.95
4254 8853 0.404040 TTGAGCATCGGGAAAACCCT 59.596 50.000 0.00 0.00 38.61 4.34
4255 8854 1.253100 TTTGAGCATCGGGAAAACCC 58.747 50.000 0.00 0.00 38.61 4.11
4256 8855 3.317150 CTTTTTGAGCATCGGGAAAACC 58.683 45.455 0.00 0.00 38.61 3.27
4257 8856 3.005367 TCCTTTTTGAGCATCGGGAAAAC 59.995 43.478 0.00 0.00 38.61 2.43
4258 8857 3.226777 TCCTTTTTGAGCATCGGGAAAA 58.773 40.909 0.00 0.00 38.61 2.29
4259 8858 2.819608 CTCCTTTTTGAGCATCGGGAAA 59.180 45.455 0.00 0.00 38.61 3.13
4260 8859 2.436417 CTCCTTTTTGAGCATCGGGAA 58.564 47.619 0.00 0.00 38.61 3.97
4261 8860 2.113860 CTCCTTTTTGAGCATCGGGA 57.886 50.000 0.00 0.00 38.61 5.14
4269 8868 4.553323 CTTTGTCCATGCTCCTTTTTGAG 58.447 43.478 0.00 0.00 35.40 3.02
4270 8869 3.321682 CCTTTGTCCATGCTCCTTTTTGA 59.678 43.478 0.00 0.00 0.00 2.69
4271 8870 3.656559 CCTTTGTCCATGCTCCTTTTTG 58.343 45.455 0.00 0.00 0.00 2.44
4272 8871 2.037641 GCCTTTGTCCATGCTCCTTTTT 59.962 45.455 0.00 0.00 0.00 1.94
4273 8872 1.620323 GCCTTTGTCCATGCTCCTTTT 59.380 47.619 0.00 0.00 0.00 2.27
4274 8873 1.260544 GCCTTTGTCCATGCTCCTTT 58.739 50.000 0.00 0.00 0.00 3.11
4275 8874 0.613012 GGCCTTTGTCCATGCTCCTT 60.613 55.000 0.00 0.00 0.00 3.36
4276 8875 1.000396 GGCCTTTGTCCATGCTCCT 60.000 57.895 0.00 0.00 0.00 3.69
4277 8876 0.685458 ATGGCCTTTGTCCATGCTCC 60.685 55.000 3.32 0.00 42.39 4.70
4278 8877 2.892025 ATGGCCTTTGTCCATGCTC 58.108 52.632 3.32 0.00 42.39 4.26
4282 8881 0.974010 CTGCCATGGCCTTTGTCCAT 60.974 55.000 33.44 0.00 44.70 3.41
4283 8882 1.607178 CTGCCATGGCCTTTGTCCA 60.607 57.895 33.44 11.64 41.09 4.02
4284 8883 3.010413 GCTGCCATGGCCTTTGTCC 62.010 63.158 33.44 10.04 41.09 4.02
4285 8884 1.610554 ATGCTGCCATGGCCTTTGTC 61.611 55.000 33.44 15.58 41.09 3.18
4286 8885 1.610554 GATGCTGCCATGGCCTTTGT 61.611 55.000 33.44 15.75 41.09 2.83
4287 8886 1.143183 GATGCTGCCATGGCCTTTG 59.857 57.895 33.44 20.57 41.09 2.77
4288 8887 1.001248 AGATGCTGCCATGGCCTTT 59.999 52.632 33.44 15.81 41.09 3.11
4289 8888 1.455217 GAGATGCTGCCATGGCCTT 60.455 57.895 33.44 16.89 41.09 4.35
4290 8889 2.195139 GAGATGCTGCCATGGCCT 59.805 61.111 33.44 22.29 41.09 5.19
4291 8890 2.910994 GGAGATGCTGCCATGGCC 60.911 66.667 33.44 19.61 41.09 5.36
4292 8891 1.735376 CTTGGAGATGCTGCCATGGC 61.735 60.000 30.54 30.54 42.35 4.40
4293 8892 0.106868 TCTTGGAGATGCTGCCATGG 60.107 55.000 7.63 7.63 33.46 3.66
4294 8893 1.676529 CTTCTTGGAGATGCTGCCATG 59.323 52.381 0.00 0.00 33.46 3.66
4295 8894 1.409802 CCTTCTTGGAGATGCTGCCAT 60.410 52.381 0.00 0.00 38.35 4.40
4296 8895 0.034767 CCTTCTTGGAGATGCTGCCA 60.035 55.000 0.00 0.00 38.35 4.92
4297 8896 0.750911 CCCTTCTTGGAGATGCTGCC 60.751 60.000 0.00 0.00 38.35 4.85
4298 8897 0.750911 CCCCTTCTTGGAGATGCTGC 60.751 60.000 0.00 0.00 38.35 5.25
4299 8898 0.914644 TCCCCTTCTTGGAGATGCTG 59.085 55.000 0.00 0.00 38.35 4.41
4300 8899 3.424640 TCCCCTTCTTGGAGATGCT 57.575 52.632 0.00 0.00 38.35 3.79
4306 8905 0.840722 GGTGTCCTCCCCTTCTTGGA 60.841 60.000 0.00 0.00 38.35 3.53
4307 8906 1.685820 GGTGTCCTCCCCTTCTTGG 59.314 63.158 0.00 0.00 0.00 3.61
4308 8907 1.296715 CGGTGTCCTCCCCTTCTTG 59.703 63.158 0.00 0.00 0.00 3.02
4309 8908 2.593956 GCGGTGTCCTCCCCTTCTT 61.594 63.158 0.00 0.00 0.00 2.52
4310 8909 3.003763 GCGGTGTCCTCCCCTTCT 61.004 66.667 0.00 0.00 0.00 2.85
4311 8910 3.003763 AGCGGTGTCCTCCCCTTC 61.004 66.667 0.00 0.00 0.00 3.46
4312 8911 3.322466 CAGCGGTGTCCTCCCCTT 61.322 66.667 6.41 0.00 0.00 3.95
4316 8915 4.767255 CTGGCAGCGGTGTCCTCC 62.767 72.222 17.70 9.38 0.00 4.30
4320 8919 3.058160 AATGCTGGCAGCGGTGTC 61.058 61.111 32.12 13.24 46.26 3.67
4321 8920 3.367743 CAATGCTGGCAGCGGTGT 61.368 61.111 32.12 16.55 46.26 4.16
4322 8921 4.124351 CCAATGCTGGCAGCGGTG 62.124 66.667 32.12 29.03 46.26 4.94
4340 8939 4.489771 AAATCCCTGCCCGGCTCG 62.490 66.667 11.61 1.48 0.00 5.03
4341 8940 2.517166 GAAATCCCTGCCCGGCTC 60.517 66.667 11.61 0.00 0.00 4.70
4342 8941 3.017581 AGAAATCCCTGCCCGGCT 61.018 61.111 11.61 0.00 0.00 5.52
4343 8942 2.517166 GAGAAATCCCTGCCCGGC 60.517 66.667 1.04 1.04 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.