Multiple sequence alignment - TraesCS6B01G299900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G299900 chr6B 100.000 9427 0 0 1 9427 538064671 538055245 0.000000e+00 17409.0
1 TraesCS6B01G299900 chr6B 91.391 151 13 0 5109 5259 538059416 538059266 3.450000e-49 207.0
2 TraesCS6B01G299900 chr6B 91.391 151 13 0 5256 5406 538059563 538059413 3.450000e-49 207.0
3 TraesCS6B01G299900 chr6B 92.453 106 8 0 6941 7046 403189151 403189256 1.640000e-32 152.0
4 TraesCS6B01G299900 chr6B 96.970 33 1 0 3526 3558 113454776 113454744 1.000000e-03 56.5
5 TraesCS6B01G299900 chr6B 100.000 29 0 0 683 711 538063937 538063909 5.000000e-03 54.7
6 TraesCS6B01G299900 chr6B 100.000 29 0 0 735 763 538063989 538063961 5.000000e-03 54.7
7 TraesCS6B01G299900 chr6D 95.419 2969 84 33 3272 6202 356727329 356724375 0.000000e+00 4682.0
8 TraesCS6B01G299900 chr6D 97.908 2534 45 3 726 3251 356729850 356727317 0.000000e+00 4379.0
9 TraesCS6B01G299900 chr6D 91.667 888 38 19 7014 7865 356723210 356722323 0.000000e+00 1197.0
10 TraesCS6B01G299900 chr6D 93.485 614 30 6 8022 8630 356722323 356721715 0.000000e+00 904.0
11 TraesCS6B01G299900 chr6D 89.134 681 51 7 8766 9425 356721714 356721036 0.000000e+00 826.0
12 TraesCS6B01G299900 chr6D 85.413 569 29 26 6464 7021 356723924 356723399 8.330000e-150 542.0
13 TraesCS6B01G299900 chr6D 91.733 375 20 4 296 663 356730218 356729848 2.350000e-140 510.0
14 TraesCS6B01G299900 chr6D 89.783 323 10 1 1 300 356730995 356730673 8.870000e-105 392.0
15 TraesCS6B01G299900 chr6D 93.377 151 10 0 5256 5406 356725483 356725333 3.430000e-54 224.0
16 TraesCS6B01G299900 chr6D 92.053 151 12 0 5109 5259 356725336 356725186 7.420000e-51 213.0
17 TraesCS6B01G299900 chr6D 100.000 28 0 0 3530 3557 295069876 295069849 1.700000e-02 52.8
18 TraesCS6B01G299900 chr6D 100.000 28 0 0 3532 3559 405118648 405118621 1.700000e-02 52.8
19 TraesCS6B01G299900 chr6A 94.702 2548 115 11 716 3249 499205022 499202481 0.000000e+00 3940.0
20 TraesCS6B01G299900 chr6A 91.814 2553 105 39 4272 6771 499201509 499199008 0.000000e+00 3461.0
21 TraesCS6B01G299900 chr6A 90.072 977 37 26 6896 7865 499198953 499198030 0.000000e+00 1212.0
22 TraesCS6B01G299900 chr6A 92.857 686 31 6 1 672 499205787 499205106 0.000000e+00 979.0
23 TraesCS6B01G299900 chr6A 94.098 610 32 4 8022 8629 499198030 499197423 0.000000e+00 924.0
24 TraesCS6B01G299900 chr6A 89.959 727 53 7 3554 4273 499202262 499201549 0.000000e+00 920.0
25 TraesCS6B01G299900 chr6A 95.113 266 11 2 8749 9013 499197427 499197163 1.460000e-112 418.0
26 TraesCS6B01G299900 chr6A 90.735 313 20 5 9123 9426 499197079 499196767 8.810000e-110 409.0
27 TraesCS6B01G299900 chr6A 90.868 219 12 2 3269 3480 499202493 499202276 4.310000e-73 287.0
28 TraesCS6B01G299900 chr6A 94.245 139 7 1 8627 8764 110763412 110763550 2.670000e-50 211.0
29 TraesCS6B01G299900 chr6A 90.066 151 15 0 5109 5259 499200519 499200369 7.470000e-46 196.0
30 TraesCS6B01G299900 chr6A 90.066 151 12 3 5259 5406 499200666 499200516 9.660000e-45 193.0
31 TraesCS6B01G299900 chr6A 96.078 51 2 0 6798 6848 499199004 499198954 6.070000e-12 84.2
32 TraesCS6B01G299900 chr3D 91.617 167 13 1 7862 8028 87926161 87925996 7.360000e-56 230.0
33 TraesCS6B01G299900 chr7B 91.071 168 13 2 7861 8028 330371133 330370968 9.530000e-55 226.0
34 TraesCS6B01G299900 chr7B 90.476 168 14 2 7861 8028 444539488 444539653 4.430000e-53 220.0
35 TraesCS6B01G299900 chr7B 94.964 139 5 2 8627 8764 657783779 657783916 5.730000e-52 217.0
36 TraesCS6B01G299900 chr7B 94.737 38 1 1 3522 3559 693642380 693642416 3.680000e-04 58.4
37 TraesCS6B01G299900 chr4D 90.964 166 14 1 7858 8023 386984832 386984668 1.230000e-53 222.0
38 TraesCS6B01G299900 chr4D 93.197 147 8 2 8627 8772 179777005 179776860 2.060000e-51 215.0
39 TraesCS6B01G299900 chr4D 94.928 138 6 1 8627 8763 489942488 489942351 2.060000e-51 215.0
40 TraesCS6B01G299900 chr5B 90.476 168 14 2 7861 8028 411971865 411972030 4.430000e-53 220.0
41 TraesCS6B01G299900 chr5B 90.476 168 14 2 7861 8028 588376890 588376725 4.430000e-53 220.0
42 TraesCS6B01G299900 chr4B 90.476 168 14 2 7861 8028 549841755 549841920 4.430000e-53 220.0
43 TraesCS6B01G299900 chr4B 92.517 147 9 2 8627 8772 106084921 106084776 9.590000e-50 209.0
44 TraesCS6B01G299900 chr4B 92.517 147 9 2 8627 8772 300592432 300592287 9.590000e-50 209.0
45 TraesCS6B01G299900 chr4B 100.000 30 0 0 3527 3556 139759809 139759780 1.000000e-03 56.5
46 TraesCS6B01G299900 chr4B 100.000 28 0 0 707 734 670192374 670192347 1.700000e-02 52.8
47 TraesCS6B01G299900 chr2B 90.476 168 14 2 7861 8028 144406901 144406736 4.430000e-53 220.0
48 TraesCS6B01G299900 chr2B 92.617 149 7 4 8607 8753 463280066 463279920 2.670000e-50 211.0
49 TraesCS6B01G299900 chr2B 96.875 32 1 0 707 738 22316952 22316921 5.000000e-03 54.7
50 TraesCS6B01G299900 chr1B 90.476 168 14 2 7861 8028 555355652 555355817 4.430000e-53 220.0
51 TraesCS6B01G299900 chr1D 94.928 138 6 1 8627 8763 383877920 383877783 2.060000e-51 215.0
52 TraesCS6B01G299900 chr1D 94.737 38 0 2 3527 3562 222333520 222333483 3.680000e-04 58.4
53 TraesCS6B01G299900 chr1D 92.500 40 3 0 3526 3565 478256524 478256563 3.680000e-04 58.4
54 TraesCS6B01G299900 chr3B 93.706 143 7 2 8622 8763 433851515 433851656 7.420000e-51 213.0
55 TraesCS6B01G299900 chr7D 95.000 40 0 2 3522 3559 631023689 631023728 2.840000e-05 62.1
56 TraesCS6B01G299900 chr7D 97.143 35 1 0 3527 3561 115092465 115092431 1.020000e-04 60.2
57 TraesCS6B01G299900 chr7D 100.000 29 0 0 3532 3560 173713030 173713002 5.000000e-03 54.7
58 TraesCS6B01G299900 chr7D 100.000 28 0 0 707 734 518683846 518683819 1.700000e-02 52.8
59 TraesCS6B01G299900 chr4A 92.857 42 2 1 3522 3563 615882140 615882100 1.020000e-04 60.2
60 TraesCS6B01G299900 chr7A 100.000 31 0 0 3530 3560 547642537 547642567 3.680000e-04 58.4
61 TraesCS6B01G299900 chr7A 96.970 33 0 1 3532 3564 208523738 208523769 5.000000e-03 54.7
62 TraesCS6B01G299900 chrUn 100.000 28 0 0 3532 3559 65676697 65676670 1.700000e-02 52.8
63 TraesCS6B01G299900 chrUn 100.000 28 0 0 3532 3559 289138407 289138434 1.700000e-02 52.8
64 TraesCS6B01G299900 chr5A 100.000 28 0 0 707 734 707802979 707802952 1.700000e-02 52.8
65 TraesCS6B01G299900 chr1A 100.000 28 0 0 3532 3559 560307937 560307964 1.700000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G299900 chr6B 538055245 538064671 9426 True 17409.000000 17409 100.000000 1 9427 1 chr6B.!!$R2 9426
1 TraesCS6B01G299900 chr6D 356721036 356730995 9959 True 1386.900000 4682 91.997200 1 9425 10 chr6D.!!$R3 9424
2 TraesCS6B01G299900 chr6A 499196767 499205787 9020 True 1085.266667 3940 92.202333 1 9426 12 chr6A.!!$R1 9425

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
346 829 1.341209 CCAGGGTTTTCAGCTTGTTCC 59.659 52.381 0.00 0.0 0.00 3.62 F
1354 1883 0.613777 GACACCTCCCAGATTTCGGT 59.386 55.000 0.00 0.0 0.00 4.69 F
2199 2728 3.057946 GGGAGCAAGTTCAACAGCTTAAG 60.058 47.826 8.68 0.0 37.48 1.85 F
3044 3586 3.243737 GGAAACAATTCACAAGGACCACC 60.244 47.826 0.00 0.0 37.29 4.61 F
4468 5092 1.102978 ACCCACGGAAAGCATAATGC 58.897 50.000 0.00 0.0 45.46 3.56 F
5670 6313 0.526096 CAAGCTGGCAACACACACAC 60.526 55.000 0.00 0.0 46.17 3.82 F
6790 7682 0.039437 TTCCTCAGTTGAGACGACGC 60.039 55.000 10.64 0.0 44.74 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1834 2363 0.250295 TGCCGACCATTAGCATAGCC 60.250 55.000 0.00 0.00 0.00 3.93 R
2427 2962 1.205417 GTAGCCATGCAATTGCCAAGT 59.795 47.619 26.94 10.75 35.16 3.16 R
3270 3815 3.643320 TGCTAACCTGGTATGGAGATGAG 59.357 47.826 0.00 0.00 0.00 2.90 R
4728 5368 1.272928 ACAGCCCAGAGATGAGACAGA 60.273 52.381 0.00 0.00 0.00 3.41 R
6215 6882 0.103208 ACCTCGTCTCGCATCAATCC 59.897 55.000 0.00 0.00 0.00 3.01 R
6792 7684 0.103937 CTGCCCATCTTCTCGGAGAC 59.896 60.000 7.33 0.00 0.00 3.36 R
8737 9874 0.040646 ACATGTACTCCCTCCGTCCA 59.959 55.000 0.00 0.00 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 7.394016 TGGTGATAATATAGTTGCATCCGAAT 58.606 34.615 0.00 0.00 0.00 3.34
36 37 7.882791 TGGTGATAATATAGTTGCATCCGAATT 59.117 33.333 0.00 0.00 0.00 2.17
64 65 1.960689 TGCCAACCTAAACCTTCTTGC 59.039 47.619 0.00 0.00 0.00 4.01
84 85 2.159693 GCGTTAGCCTACTTTCAACTGC 60.160 50.000 0.00 0.00 37.42 4.40
128 152 4.016666 ACCCTGGTCATATTTCAAATCCCA 60.017 41.667 0.00 0.00 0.00 4.37
166 190 2.485814 GAGTTGATGTGTCTGGAAAGGC 59.514 50.000 0.00 0.00 0.00 4.35
186 210 2.937433 GCTTCTCCAGGGCAGTACTTTC 60.937 54.545 0.00 0.00 0.00 2.62
291 315 2.048444 AGATAGTGAACCGGCTACGA 57.952 50.000 0.00 0.00 44.60 3.43
346 829 1.341209 CCAGGGTTTTCAGCTTGTTCC 59.659 52.381 0.00 0.00 0.00 3.62
359 842 2.101415 GCTTGTTCCCATAAAGGCCATC 59.899 50.000 5.01 0.00 35.39 3.51
362 845 3.992999 TGTTCCCATAAAGGCCATCATT 58.007 40.909 5.01 0.00 35.39 2.57
363 846 3.705579 TGTTCCCATAAAGGCCATCATTG 59.294 43.478 5.01 0.00 35.39 2.82
364 847 3.960102 GTTCCCATAAAGGCCATCATTGA 59.040 43.478 5.01 0.00 35.39 2.57
366 849 4.154176 TCCCATAAAGGCCATCATTGATG 58.846 43.478 18.00 18.00 35.74 3.07
367 850 3.899360 CCCATAAAGGCCATCATTGATGT 59.101 43.478 21.95 8.50 34.87 3.06
368 851 4.262292 CCCATAAAGGCCATCATTGATGTG 60.262 45.833 21.95 15.29 34.87 3.21
369 852 4.342951 CCATAAAGGCCATCATTGATGTGT 59.657 41.667 21.95 6.40 38.28 3.72
370 853 5.163385 CCATAAAGGCCATCATTGATGTGTT 60.163 40.000 21.95 13.37 38.28 3.32
371 854 6.040729 CCATAAAGGCCATCATTGATGTGTTA 59.959 38.462 21.95 14.70 38.28 2.41
373 856 8.795513 CATAAAGGCCATCATTGATGTGTTATA 58.204 33.333 21.95 11.62 38.28 0.98
375 858 8.938801 AAAGGCCATCATTGATGTGTTATATA 57.061 30.769 21.95 0.00 38.28 0.86
376 859 8.571461 AAGGCCATCATTGATGTGTTATATAG 57.429 34.615 21.95 7.43 38.28 1.31
379 862 8.239314 GGCCATCATTGATGTGTTATATAGTTG 58.761 37.037 21.95 6.22 38.28 3.16
380 863 7.752239 GCCATCATTGATGTGTTATATAGTTGC 59.248 37.037 21.95 11.39 38.28 4.17
384 867 9.002600 TCATTGATGTGTTATATAGTTGCATCC 57.997 33.333 0.00 0.00 32.70 3.51
385 868 7.420184 TTGATGTGTTATATAGTTGCATCCG 57.580 36.000 0.00 0.00 32.70 4.18
386 869 6.754193 TGATGTGTTATATAGTTGCATCCGA 58.246 36.000 0.00 0.00 32.70 4.55
392 879 7.334421 GTGTTATATAGTTGCATCCGAATCCAT 59.666 37.037 0.00 0.00 0.00 3.41
400 887 7.114754 AGTTGCATCCGAATCCATATATTCAT 58.885 34.615 0.00 0.00 35.93 2.57
529 1016 4.382254 CCTGCGGACACCAAACTAATACTA 60.382 45.833 0.00 0.00 0.00 1.82
571 1058 8.256611 TCTTGAGTCTGAATTAACATAACAGC 57.743 34.615 0.00 0.00 0.00 4.40
615 1102 1.976045 GAGTTTACATTTTGCGCCACG 59.024 47.619 4.18 0.00 0.00 4.94
672 1159 6.664816 TGTTTTTATCTTCTACTCCCTCCGTA 59.335 38.462 0.00 0.00 0.00 4.02
673 1160 7.178983 TGTTTTTATCTTCTACTCCCTCCGTAA 59.821 37.037 0.00 0.00 0.00 3.18
674 1161 7.722949 TTTTATCTTCTACTCCCTCCGTAAA 57.277 36.000 0.00 0.00 0.00 2.01
675 1162 6.956202 TTATCTTCTACTCCCTCCGTAAAG 57.044 41.667 0.00 0.00 0.00 1.85
676 1163 3.629087 TCTTCTACTCCCTCCGTAAAGG 58.371 50.000 0.00 0.00 42.97 3.11
689 1176 4.718940 CCGTAAAGGAAAATTGCTGGAT 57.281 40.909 0.00 0.00 45.00 3.41
690 1177 5.072040 CCGTAAAGGAAAATTGCTGGATT 57.928 39.130 0.00 0.00 45.00 3.01
691 1178 4.864247 CCGTAAAGGAAAATTGCTGGATTG 59.136 41.667 0.00 0.00 45.00 2.67
692 1179 4.327087 CGTAAAGGAAAATTGCTGGATTGC 59.673 41.667 0.00 0.00 0.00 3.56
693 1180 4.628963 AAAGGAAAATTGCTGGATTGCT 57.371 36.364 0.00 0.00 0.00 3.91
694 1181 3.604875 AGGAAAATTGCTGGATTGCTG 57.395 42.857 0.00 0.00 0.00 4.41
695 1182 2.901839 AGGAAAATTGCTGGATTGCTGT 59.098 40.909 0.00 0.00 0.00 4.40
696 1183 3.056322 AGGAAAATTGCTGGATTGCTGTC 60.056 43.478 0.00 0.00 0.00 3.51
698 1185 4.309099 GAAAATTGCTGGATTGCTGTCAA 58.691 39.130 0.00 0.00 36.51 3.18
821 1348 3.611113 GCATTGTGAACTAATTGCTGCTG 59.389 43.478 0.00 0.00 0.00 4.41
1041 1570 0.664761 CAGGGCACAATAGGCAATCG 59.335 55.000 0.00 0.00 35.46 3.34
1157 1686 3.681594 CGGTTGCCTAAAGATCCTGCTAA 60.682 47.826 0.00 0.00 0.00 3.09
1197 1726 3.515602 AGAAGGCAAAACACATCTCCT 57.484 42.857 0.00 0.00 0.00 3.69
1257 1786 3.982058 GCTTGAGGAATAATCGTACTCCG 59.018 47.826 0.00 0.00 30.53 4.63
1354 1883 0.613777 GACACCTCCCAGATTTCGGT 59.386 55.000 0.00 0.00 0.00 4.69
1614 2143 6.260271 GGCCTAGTTCCAAACATAATGAGTAC 59.740 42.308 0.00 0.00 0.00 2.73
1834 2363 3.929417 TTTCACGAACTACAAACACCG 57.071 42.857 0.00 0.00 0.00 4.94
2199 2728 3.057946 GGGAGCAAGTTCAACAGCTTAAG 60.058 47.826 8.68 0.00 37.48 1.85
2392 2927 4.706842 ATTCATTCTACCGGCCAGTTAT 57.293 40.909 0.00 0.00 0.00 1.89
2829 3368 4.079385 AGGGTATTTGGACATCCCTTAACC 60.079 45.833 0.00 0.00 45.19 2.85
3044 3586 3.243737 GGAAACAATTCACAAGGACCACC 60.244 47.826 0.00 0.00 37.29 4.61
3187 3732 6.264832 TGTCTTGTGTTGTTCAGCATTTTAG 58.735 36.000 0.00 0.00 0.00 1.85
3199 3744 8.028938 TGTTCAGCATTTTAGAAGAAATTAGGC 58.971 33.333 0.00 0.00 0.00 3.93
3246 3791 5.810074 GCAGTCTCTTTTCTAACTCATCTCC 59.190 44.000 0.00 0.00 0.00 3.71
3247 3792 6.573289 GCAGTCTCTTTTCTAACTCATCTCCA 60.573 42.308 0.00 0.00 0.00 3.86
3248 3793 7.555087 CAGTCTCTTTTCTAACTCATCTCCAT 58.445 38.462 0.00 0.00 0.00 3.41
3249 3794 8.690884 CAGTCTCTTTTCTAACTCATCTCCATA 58.309 37.037 0.00 0.00 0.00 2.74
3250 3795 8.691797 AGTCTCTTTTCTAACTCATCTCCATAC 58.308 37.037 0.00 0.00 0.00 2.39
3251 3796 8.470805 GTCTCTTTTCTAACTCATCTCCATACA 58.529 37.037 0.00 0.00 0.00 2.29
3252 3797 9.035890 TCTCTTTTCTAACTCATCTCCATACAA 57.964 33.333 0.00 0.00 0.00 2.41
3253 3798 9.658799 CTCTTTTCTAACTCATCTCCATACAAA 57.341 33.333 0.00 0.00 0.00 2.83
3259 3804 9.958180 TCTAACTCATCTCCATACAAAAATTCA 57.042 29.630 0.00 0.00 0.00 2.57
3476 4028 1.340017 TGTATCCCTCAGTTGGCAAGC 60.340 52.381 0.00 0.00 0.00 4.01
3521 4073 3.875727 TCCGTTCCAAAACAAATGTCGTA 59.124 39.130 0.00 0.00 34.93 3.43
4121 4680 2.880890 GGATTGGGTGTGTATGCAGATC 59.119 50.000 0.00 0.00 0.00 2.75
4217 4776 5.940470 ACCAACTAGCTAAGTCTCCAATTTG 59.060 40.000 0.00 0.00 37.50 2.32
4229 4789 6.564328 AGTCTCCAATTTGAAACACAGAAAC 58.436 36.000 0.00 0.00 0.00 2.78
4234 4794 6.811170 TCCAATTTGAAACACAGAAACAAGAC 59.189 34.615 0.00 0.00 0.00 3.01
4287 4888 4.858850 ACCATTAAGATTGATGACTGCCA 58.141 39.130 0.00 0.00 0.00 4.92
4375 4980 1.117994 TGCCAGTCTGCTAGAGATGG 58.882 55.000 0.00 10.52 34.71 3.51
4468 5092 1.102978 ACCCACGGAAAGCATAATGC 58.897 50.000 0.00 0.00 45.46 3.56
4507 5138 1.337260 CCCAGTCTCAGAACCTCAACG 60.337 57.143 0.00 0.00 0.00 4.10
4572 5211 9.182214 AGATAATGAGCAGTTAAACAATGACAT 57.818 29.630 0.00 0.00 0.00 3.06
4728 5368 5.593679 ACAAATCTGCCTACTGTATACGT 57.406 39.130 0.00 0.00 0.00 3.57
4985 5625 3.558746 CCTTCAACACTGGAGATGCTTCT 60.559 47.826 0.96 0.96 27.97 2.85
5093 5733 2.100197 TCCGATGTCTCGTGAATTCCT 58.900 47.619 2.27 0.00 43.49 3.36
5211 5854 4.335416 TGAAATTCTTGATCCACAGACCC 58.665 43.478 0.00 0.00 0.00 4.46
5269 5912 4.092091 GTCTGATTCACCGAAGTCATCAAC 59.908 45.833 0.00 0.00 0.00 3.18
5353 5996 7.342284 AGAGGATTCTGAAATTCTTGATGCAAT 59.658 33.333 0.00 0.00 30.32 3.56
5416 6059 3.197766 TCTGATTCACCGCCTACAATTCT 59.802 43.478 0.00 0.00 0.00 2.40
5461 6104 0.529337 CCATGATCAGAAGCGTCGCT 60.529 55.000 15.47 15.47 42.56 4.93
5469 6112 2.892334 GAAGCGTCGCTGCCAACAA 61.892 57.895 22.50 0.00 39.62 2.83
5513 6156 5.772004 TCCTCTCTAGGCTCCATAATATCC 58.228 45.833 0.00 0.00 43.31 2.59
5593 6236 4.828296 CATGTGGCAGGGGAGGGC 62.828 72.222 0.00 0.00 0.00 5.19
5645 6288 2.405172 GTGGAGAAGAAGTTCACCGTC 58.595 52.381 5.50 0.00 44.24 4.79
5670 6313 0.526096 CAAGCTGGCAACACACACAC 60.526 55.000 0.00 0.00 46.17 3.82
5671 6314 0.964860 AAGCTGGCAACACACACACA 60.965 50.000 0.00 0.00 46.17 3.72
5672 6315 1.064621 GCTGGCAACACACACACAG 59.935 57.895 0.00 0.00 46.17 3.66
5673 6316 1.375853 GCTGGCAACACACACACAGA 61.376 55.000 0.00 0.00 46.17 3.41
5706 6349 2.831685 ACAGCCGTTCACATCAGTAA 57.168 45.000 0.00 0.00 0.00 2.24
5836 6479 1.257750 TGAGCATGGTGTAGGCGAGT 61.258 55.000 0.00 0.00 41.91 4.18
5941 6584 3.114616 CACTCGAACTGCAGGCCG 61.115 66.667 19.93 19.75 0.00 6.13
5964 6615 6.345565 CCGAGAAACACACGTTTAGTAAGAAG 60.346 42.308 0.00 0.00 45.40 2.85
5967 6618 8.128016 AGAAACACACGTTTAGTAAGAAGAAG 57.872 34.615 0.00 0.00 45.40 2.85
5968 6619 5.902051 ACACACGTTTAGTAAGAAGAAGC 57.098 39.130 0.00 0.00 0.00 3.86
5973 6630 5.346281 CACGTTTAGTAAGAAGAAGCAGAGG 59.654 44.000 0.00 0.00 0.00 3.69
5974 6631 5.243283 ACGTTTAGTAAGAAGAAGCAGAGGA 59.757 40.000 0.00 0.00 0.00 3.71
5976 6633 6.814146 CGTTTAGTAAGAAGAAGCAGAGGAAT 59.186 38.462 0.00 0.00 0.00 3.01
5986 6643 2.119495 AGCAGAGGAATCGTAACCCAT 58.881 47.619 0.00 0.00 0.00 4.00
5989 6646 3.458189 CAGAGGAATCGTAACCCATCAC 58.542 50.000 0.00 0.00 0.00 3.06
5990 6647 2.100916 AGAGGAATCGTAACCCATCACG 59.899 50.000 0.00 0.00 39.48 4.35
5991 6648 1.138266 AGGAATCGTAACCCATCACGG 59.862 52.381 0.00 0.00 38.66 4.94
6015 6672 4.319177 ACGAAGTGAATCTTGGAAGAAGG 58.681 43.478 0.00 0.00 42.51 3.46
6016 6673 3.686726 CGAAGTGAATCTTGGAAGAAGGG 59.313 47.826 0.00 0.00 38.77 3.95
6018 6675 2.989571 AGTGAATCTTGGAAGAAGGGGT 59.010 45.455 0.00 0.00 38.77 4.95
6019 6676 3.399305 AGTGAATCTTGGAAGAAGGGGTT 59.601 43.478 0.00 0.00 38.77 4.11
6215 6882 6.390987 GCAAGAAGCAAAGATGAGATTTTG 57.609 37.500 0.00 0.00 44.79 2.44
6234 6901 0.103208 GGATTGATGCGAGACGAGGT 59.897 55.000 0.00 0.00 0.00 3.85
6239 6906 3.957435 ATGCGAGACGAGGTGGGGA 62.957 63.158 0.00 0.00 0.00 4.81
6314 6981 0.108424 AGGTAGCAGCAGAAGAAGCG 60.108 55.000 0.00 0.00 37.01 4.68
6315 6982 1.086634 GGTAGCAGCAGAAGAAGCGG 61.087 60.000 0.00 0.00 37.01 5.52
6363 7030 1.200020 CCATCTTTGGTTTCCTCGTGC 59.800 52.381 0.00 0.00 38.30 5.34
6475 7345 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6476 7346 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6477 7347 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6478 7348 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6479 7349 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6480 7350 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6481 7351 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6482 7352 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6483 7353 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6484 7354 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6485 7355 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6486 7356 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6487 7357 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6488 7358 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6564 7434 2.279784 CGAGATGAAGGCCGCCTC 60.280 66.667 13.72 7.14 30.89 4.70
6584 7454 0.759060 TCCGATCCCGTGTGATGGAT 60.759 55.000 0.00 0.00 44.05 3.41
6588 7458 2.800544 CGATCCCGTGTGATGGATTTAC 59.199 50.000 0.00 0.00 41.44 2.01
6592 7462 2.097466 CCCGTGTGATGGATTTACAAGC 59.903 50.000 0.00 0.00 0.00 4.01
6655 7529 1.700186 AGAGAAACCTCACTTGACCCC 59.300 52.381 0.00 0.00 33.16 4.95
6777 7669 4.657952 TCGAGCCTCGATTCCTCA 57.342 55.556 13.77 0.00 44.82 3.86
6778 7670 2.409399 TCGAGCCTCGATTCCTCAG 58.591 57.895 13.77 0.00 44.82 3.35
6785 7677 2.737039 GCCTCGATTCCTCAGTTGAGAC 60.737 54.545 10.64 0.00 44.74 3.36
6786 7678 2.478709 CCTCGATTCCTCAGTTGAGACG 60.479 54.545 10.64 10.03 44.74 4.18
6787 7679 2.420372 CTCGATTCCTCAGTTGAGACGA 59.580 50.000 10.64 12.98 44.74 4.20
6788 7680 2.161808 TCGATTCCTCAGTTGAGACGAC 59.838 50.000 10.64 0.00 44.74 4.34
6789 7681 2.520979 GATTCCTCAGTTGAGACGACG 58.479 52.381 10.64 0.00 44.74 5.12
6790 7682 0.039437 TTCCTCAGTTGAGACGACGC 60.039 55.000 10.64 0.00 44.74 5.19
6791 7683 1.444553 CCTCAGTTGAGACGACGCC 60.445 63.158 10.64 0.00 44.74 5.68
6792 7684 1.797933 CTCAGTTGAGACGACGCCG 60.798 63.158 2.97 0.00 44.74 6.46
6812 7704 1.227497 CTCCGAGAAGATGGGCAGC 60.227 63.158 0.00 0.00 0.00 5.25
6874 7766 2.103340 GAGAGGGTTCGAGCGAGC 59.897 66.667 0.00 0.00 0.00 5.03
7103 8195 6.375174 TGACTCACAAATATGCTTGCAGTATT 59.625 34.615 0.87 3.65 0.00 1.89
7148 8270 5.641783 TGCATTAGCTGACTTGCAAATAA 57.358 34.783 4.43 0.00 41.76 1.40
7150 8272 6.632909 TGCATTAGCTGACTTGCAAATAAAT 58.367 32.000 4.43 0.00 41.76 1.40
7334 8459 6.842676 AGTATTTGTCCCTTCTCAAGTCTTT 58.157 36.000 0.00 0.00 0.00 2.52
7346 8471 8.850156 CCTTCTCAAGTCTTTTTATTTCCTTCA 58.150 33.333 0.00 0.00 0.00 3.02
7395 8520 4.482386 CATGTGCTCTTCACTTCCATTTG 58.518 43.478 0.00 0.00 45.81 2.32
7453 8578 1.187087 AGCTATACCGCTAGGATGGC 58.813 55.000 0.00 0.00 38.76 4.40
7536 8668 7.049799 TGCTGGAGTAAAACAAAATTTAGCT 57.950 32.000 0.00 0.00 0.00 3.32
7584 8716 7.309377 CCTTACATCTCATTGGTTGTGAACATT 60.309 37.037 0.00 0.00 32.00 2.71
7667 8799 2.172505 TCAGTCACCAACTCACCATTGT 59.827 45.455 0.00 0.00 35.45 2.71
7716 8848 6.624352 AATGTTATTGAGCTGTGCGATTAT 57.376 33.333 0.00 0.00 0.00 1.28
7720 8852 7.796838 TGTTATTGAGCTGTGCGATTATATTC 58.203 34.615 0.00 0.00 0.00 1.75
7865 8997 6.481644 CAGATTTAACCTCAAGGATGCTACTC 59.518 42.308 2.30 0.00 38.94 2.59
7866 8998 4.755266 TTAACCTCAAGGATGCTACTCC 57.245 45.455 2.30 0.00 38.94 3.85
7867 8999 1.501582 ACCTCAAGGATGCTACTCCC 58.498 55.000 2.30 0.00 38.94 4.30
7868 9000 1.008938 ACCTCAAGGATGCTACTCCCT 59.991 52.381 2.30 0.00 38.94 4.20
7869 9001 2.247635 ACCTCAAGGATGCTACTCCCTA 59.752 50.000 2.30 0.00 38.94 3.53
7870 9002 2.630580 CCTCAAGGATGCTACTCCCTAC 59.369 54.545 0.00 0.00 35.79 3.18
7871 9003 2.294791 CTCAAGGATGCTACTCCCTACG 59.705 54.545 0.00 0.00 35.79 3.51
7872 9004 2.032620 CAAGGATGCTACTCCCTACGT 58.967 52.381 0.00 0.00 35.79 3.57
7873 9005 2.431057 CAAGGATGCTACTCCCTACGTT 59.569 50.000 0.00 0.00 35.79 3.99
7874 9006 2.308690 AGGATGCTACTCCCTACGTTC 58.691 52.381 0.00 0.00 35.79 3.95
7875 9007 1.340568 GGATGCTACTCCCTACGTTCC 59.659 57.143 0.00 0.00 0.00 3.62
7876 9008 2.308690 GATGCTACTCCCTACGTTCCT 58.691 52.381 0.00 0.00 0.00 3.36
7877 9009 3.484407 GATGCTACTCCCTACGTTCCTA 58.516 50.000 0.00 0.00 0.00 2.94
7878 9010 3.370840 TGCTACTCCCTACGTTCCTAA 57.629 47.619 0.00 0.00 0.00 2.69
7879 9011 3.700538 TGCTACTCCCTACGTTCCTAAA 58.299 45.455 0.00 0.00 0.00 1.85
7880 9012 4.284178 TGCTACTCCCTACGTTCCTAAAT 58.716 43.478 0.00 0.00 0.00 1.40
7881 9013 5.448654 TGCTACTCCCTACGTTCCTAAATA 58.551 41.667 0.00 0.00 0.00 1.40
7882 9014 6.073314 TGCTACTCCCTACGTTCCTAAATAT 58.927 40.000 0.00 0.00 0.00 1.28
7883 9015 7.233632 TGCTACTCCCTACGTTCCTAAATATA 58.766 38.462 0.00 0.00 0.00 0.86
7884 9016 7.725397 TGCTACTCCCTACGTTCCTAAATATAA 59.275 37.037 0.00 0.00 0.00 0.98
7885 9017 8.242739 GCTACTCCCTACGTTCCTAAATATAAG 58.757 40.741 0.00 0.00 0.00 1.73
7886 9018 9.294614 CTACTCCCTACGTTCCTAAATATAAGT 57.705 37.037 0.00 0.00 0.00 2.24
7887 9019 8.175925 ACTCCCTACGTTCCTAAATATAAGTC 57.824 38.462 0.00 0.00 0.00 3.01
7888 9020 8.003629 ACTCCCTACGTTCCTAAATATAAGTCT 58.996 37.037 0.00 0.00 0.00 3.24
7889 9021 8.773033 TCCCTACGTTCCTAAATATAAGTCTT 57.227 34.615 0.00 0.00 0.00 3.01
7890 9022 9.205513 TCCCTACGTTCCTAAATATAAGTCTTT 57.794 33.333 0.00 0.00 0.00 2.52
7891 9023 9.828039 CCCTACGTTCCTAAATATAAGTCTTTT 57.172 33.333 0.00 0.00 0.00 2.27
7952 9084 9.851686 ATAGGCATGTTTTAGAATGTAGATTCA 57.148 29.630 14.46 0.00 40.59 2.57
7953 9085 7.989826 AGGCATGTTTTAGAATGTAGATTCAC 58.010 34.615 14.46 4.91 40.59 3.18
7954 9086 7.831193 AGGCATGTTTTAGAATGTAGATTCACT 59.169 33.333 14.46 0.00 40.59 3.41
7955 9087 8.125448 GGCATGTTTTAGAATGTAGATTCACTC 58.875 37.037 14.46 2.09 40.59 3.51
7956 9088 8.668353 GCATGTTTTAGAATGTAGATTCACTCA 58.332 33.333 14.46 6.83 40.59 3.41
7966 9098 8.955061 AATGTAGATTCACTCATTTTGTTTCG 57.045 30.769 0.00 0.00 0.00 3.46
7967 9099 7.490962 TGTAGATTCACTCATTTTGTTTCGT 57.509 32.000 0.00 0.00 0.00 3.85
7968 9100 8.596271 TGTAGATTCACTCATTTTGTTTCGTA 57.404 30.769 0.00 0.00 0.00 3.43
7969 9101 9.214957 TGTAGATTCACTCATTTTGTTTCGTAT 57.785 29.630 0.00 0.00 0.00 3.06
7970 9102 9.478019 GTAGATTCACTCATTTTGTTTCGTATG 57.522 33.333 0.00 0.00 0.00 2.39
7971 9103 8.099364 AGATTCACTCATTTTGTTTCGTATGT 57.901 30.769 0.00 0.00 0.00 2.29
7972 9104 8.017373 AGATTCACTCATTTTGTTTCGTATGTG 58.983 33.333 0.00 0.00 0.00 3.21
7973 9105 5.996219 TCACTCATTTTGTTTCGTATGTGG 58.004 37.500 0.00 0.00 0.00 4.17
7974 9106 5.529430 TCACTCATTTTGTTTCGTATGTGGT 59.471 36.000 0.00 0.00 0.00 4.16
7975 9107 5.851177 CACTCATTTTGTTTCGTATGTGGTC 59.149 40.000 0.00 0.00 0.00 4.02
7976 9108 5.048991 ACTCATTTTGTTTCGTATGTGGTCC 60.049 40.000 0.00 0.00 0.00 4.46
7977 9109 4.822350 TCATTTTGTTTCGTATGTGGTCCA 59.178 37.500 0.00 0.00 0.00 4.02
7978 9110 5.475220 TCATTTTGTTTCGTATGTGGTCCAT 59.525 36.000 0.00 0.00 37.58 3.41
7979 9111 6.655425 TCATTTTGTTTCGTATGTGGTCCATA 59.345 34.615 0.00 0.00 34.86 2.74
7980 9112 7.338196 TCATTTTGTTTCGTATGTGGTCCATAT 59.662 33.333 6.35 6.35 38.29 1.78
7981 9113 7.455641 TTTTGTTTCGTATGTGGTCCATATT 57.544 32.000 6.41 0.00 38.29 1.28
7982 9114 6.429791 TTGTTTCGTATGTGGTCCATATTG 57.570 37.500 6.41 0.76 38.29 1.90
7983 9115 5.735766 TGTTTCGTATGTGGTCCATATTGA 58.264 37.500 6.41 3.13 38.29 2.57
7984 9116 6.174049 TGTTTCGTATGTGGTCCATATTGAA 58.826 36.000 6.41 8.74 38.29 2.69
7985 9117 6.655425 TGTTTCGTATGTGGTCCATATTGAAA 59.345 34.615 17.40 17.40 38.98 2.69
7986 9118 7.338196 TGTTTCGTATGTGGTCCATATTGAAAT 59.662 33.333 21.13 0.00 40.90 2.17
7987 9119 7.490962 TTCGTATGTGGTCCATATTGAAATC 57.509 36.000 6.41 0.00 38.29 2.17
7988 9120 6.826668 TCGTATGTGGTCCATATTGAAATCT 58.173 36.000 6.41 0.00 38.29 2.40
7989 9121 6.929049 TCGTATGTGGTCCATATTGAAATCTC 59.071 38.462 6.41 0.00 38.29 2.75
7990 9122 6.931281 CGTATGTGGTCCATATTGAAATCTCT 59.069 38.462 6.41 0.00 38.29 3.10
7991 9123 8.088365 CGTATGTGGTCCATATTGAAATCTCTA 58.912 37.037 6.41 0.00 38.29 2.43
7992 9124 9.778741 GTATGTGGTCCATATTGAAATCTCTAA 57.221 33.333 6.41 0.00 38.29 2.10
7994 9126 9.699410 ATGTGGTCCATATTGAAATCTCTAAAA 57.301 29.630 0.00 0.00 29.82 1.52
7995 9127 9.527157 TGTGGTCCATATTGAAATCTCTAAAAA 57.473 29.630 0.00 0.00 0.00 1.94
7997 9129 9.973661 TGGTCCATATTGAAATCTCTAAAAAGA 57.026 29.630 0.00 0.00 0.00 2.52
8017 9149 7.929941 AAAGACTTAAATTTAGGAGCAGAGG 57.070 36.000 13.73 0.00 0.00 3.69
8018 9150 5.995446 AGACTTAAATTTAGGAGCAGAGGG 58.005 41.667 13.73 0.00 0.00 4.30
8019 9151 5.726793 AGACTTAAATTTAGGAGCAGAGGGA 59.273 40.000 13.73 0.00 0.00 4.20
8020 9152 5.995446 ACTTAAATTTAGGAGCAGAGGGAG 58.005 41.667 13.73 0.00 0.00 4.30
8021 9153 5.489278 ACTTAAATTTAGGAGCAGAGGGAGT 59.511 40.000 13.73 0.43 0.00 3.85
8030 9162 6.321821 AGGAGCAGAGGGAGTACTATATAG 57.678 45.833 8.27 8.27 0.00 1.31
8034 9166 5.491078 AGCAGAGGGAGTACTATATAGCTCT 59.509 44.000 9.78 9.10 0.00 4.09
8035 9167 5.820947 GCAGAGGGAGTACTATATAGCTCTC 59.179 48.000 18.63 18.63 0.00 3.20
8048 9180 1.853963 AGCTCTCCAGACATAACCGT 58.146 50.000 0.00 0.00 0.00 4.83
8102 9235 3.406764 CCTGCAGAAACTTGTAGAGCTT 58.593 45.455 17.39 0.00 33.23 3.74
8108 9241 5.701290 GCAGAAACTTGTAGAGCTTTTCCTA 59.299 40.000 0.00 0.00 0.00 2.94
8135 9268 6.101734 AGGGAATCCATGCTAACATAAAGAGA 59.898 38.462 0.09 0.00 33.67 3.10
8180 9313 0.034896 ACGTGAGTTTCCTCGGCATT 59.965 50.000 0.00 0.00 46.40 3.56
8183 9316 2.412847 CGTGAGTTTCCTCGGCATTTTC 60.413 50.000 0.00 0.00 40.85 2.29
8184 9317 1.804151 TGAGTTTCCTCGGCATTTTCG 59.196 47.619 0.00 0.00 40.85 3.46
8212 9345 2.743928 GCACTTCCCCTGTGAGCG 60.744 66.667 0.00 0.00 37.60 5.03
8260 9393 4.591321 ATTTCAGGATAAGAGGTTGCCA 57.409 40.909 0.00 0.00 0.00 4.92
8309 9442 4.016444 GGAAGGTAATTTGGCACTCATGA 58.984 43.478 0.00 0.00 0.00 3.07
8443 9577 4.614475 TCATGAAGACTCCACTAGACCAT 58.386 43.478 0.00 0.00 0.00 3.55
8464 9598 1.205417 CCGAGAAAATTTGGCATGCCT 59.795 47.619 35.53 16.22 36.94 4.75
8512 9646 4.013728 GCCAGTATGTATTTGGTTCACCA 58.986 43.478 0.00 0.00 45.94 4.17
8542 9676 0.384309 CTGCCGGCGTTCATAGTAGA 59.616 55.000 23.90 0.00 0.00 2.59
8631 9768 5.061920 GCCTATGCTATGTACAGTACTCC 57.938 47.826 12.07 0.00 33.53 3.85
8632 9769 4.082136 GCCTATGCTATGTACAGTACTCCC 60.082 50.000 12.07 0.00 33.53 4.30
8633 9770 5.326069 CCTATGCTATGTACAGTACTCCCT 58.674 45.833 12.07 0.00 0.00 4.20
8634 9771 5.416326 CCTATGCTATGTACAGTACTCCCTC 59.584 48.000 12.07 0.00 0.00 4.30
8635 9772 4.521536 TGCTATGTACAGTACTCCCTCT 57.478 45.455 12.07 0.00 0.00 3.69
8636 9773 4.207955 TGCTATGTACAGTACTCCCTCTG 58.792 47.826 12.07 0.00 37.65 3.35
8637 9774 4.208746 GCTATGTACAGTACTCCCTCTGT 58.791 47.826 12.07 0.00 45.21 3.41
8638 9775 4.276431 GCTATGTACAGTACTCCCTCTGTC 59.724 50.000 12.07 0.00 42.77 3.51
8639 9776 3.083122 TGTACAGTACTCCCTCTGTCC 57.917 52.381 12.07 0.00 42.77 4.02
8640 9777 2.015587 GTACAGTACTCCCTCTGTCCG 58.984 57.143 3.19 0.00 42.77 4.79
8641 9778 0.697079 ACAGTACTCCCTCTGTCCGA 59.303 55.000 0.00 0.00 40.28 4.55
8642 9779 1.075050 ACAGTACTCCCTCTGTCCGAA 59.925 52.381 0.00 0.00 40.28 4.30
8643 9780 2.168496 CAGTACTCCCTCTGTCCGAAA 58.832 52.381 0.00 0.00 0.00 3.46
8644 9781 2.561419 CAGTACTCCCTCTGTCCGAAAA 59.439 50.000 0.00 0.00 0.00 2.29
8645 9782 3.195825 CAGTACTCCCTCTGTCCGAAAAT 59.804 47.826 0.00 0.00 0.00 1.82
8646 9783 4.401519 CAGTACTCCCTCTGTCCGAAAATA 59.598 45.833 0.00 0.00 0.00 1.40
8647 9784 3.889520 ACTCCCTCTGTCCGAAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
8648 9785 3.442076 ACTCCCTCTGTCCGAAAATACT 58.558 45.455 0.00 0.00 0.00 2.12
8649 9786 3.838903 ACTCCCTCTGTCCGAAAATACTT 59.161 43.478 0.00 0.00 0.00 2.24
8650 9787 4.184629 CTCCCTCTGTCCGAAAATACTTG 58.815 47.826 0.00 0.00 0.00 3.16
8651 9788 3.581332 TCCCTCTGTCCGAAAATACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
8652 9789 3.933332 CCCTCTGTCCGAAAATACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
8653 9790 4.562757 CCCTCTGTCCGAAAATACTTGTCA 60.563 45.833 0.00 0.00 0.00 3.58
8654 9791 5.178797 CCTCTGTCCGAAAATACTTGTCAT 58.821 41.667 0.00 0.00 0.00 3.06
8655 9792 5.292101 CCTCTGTCCGAAAATACTTGTCATC 59.708 44.000 0.00 0.00 0.00 2.92
8656 9793 5.789521 TCTGTCCGAAAATACTTGTCATCA 58.210 37.500 0.00 0.00 0.00 3.07
8657 9794 6.227522 TCTGTCCGAAAATACTTGTCATCAA 58.772 36.000 0.00 0.00 0.00 2.57
8658 9795 6.708502 TCTGTCCGAAAATACTTGTCATCAAA 59.291 34.615 0.00 0.00 32.87 2.69
8659 9796 7.227711 TCTGTCCGAAAATACTTGTCATCAAAA 59.772 33.333 0.00 0.00 32.87 2.44
8660 9797 7.881142 TGTCCGAAAATACTTGTCATCAAAAT 58.119 30.769 0.00 0.00 32.87 1.82
8661 9798 7.807433 TGTCCGAAAATACTTGTCATCAAAATG 59.193 33.333 0.00 0.00 32.87 2.32
8662 9799 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
8663 9800 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
8664 9801 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
8708 9845 9.978044 AAACTAAAATACGTCTAGATACATCCC 57.022 33.333 0.00 0.00 0.00 3.85
8709 9846 8.937207 ACTAAAATACGTCTAGATACATCCCT 57.063 34.615 0.00 0.00 0.00 4.20
8710 9847 9.364653 ACTAAAATACGTCTAGATACATCCCTT 57.635 33.333 0.00 0.00 0.00 3.95
8716 9853 7.229581 ACGTCTAGATACATCCCTTTTATCC 57.770 40.000 0.00 0.00 0.00 2.59
8717 9854 6.781014 ACGTCTAGATACATCCCTTTTATCCA 59.219 38.462 0.00 0.00 0.00 3.41
8718 9855 7.455008 ACGTCTAGATACATCCCTTTTATCCAT 59.545 37.037 0.00 0.00 0.00 3.41
8719 9856 8.314751 CGTCTAGATACATCCCTTTTATCCATT 58.685 37.037 0.00 0.00 0.00 3.16
8724 9861 9.887862 AGATACATCCCTTTTATCCATTTTGAT 57.112 29.630 0.00 0.00 0.00 2.57
8725 9862 9.918630 GATACATCCCTTTTATCCATTTTGATG 57.081 33.333 0.00 0.00 34.68 3.07
8726 9863 7.976414 ACATCCCTTTTATCCATTTTGATGA 57.024 32.000 0.00 0.00 33.22 2.92
8727 9864 7.785033 ACATCCCTTTTATCCATTTTGATGAC 58.215 34.615 0.00 0.00 33.22 3.06
8728 9865 7.399765 ACATCCCTTTTATCCATTTTGATGACA 59.600 33.333 0.00 0.00 33.22 3.58
8729 9866 7.789202 TCCCTTTTATCCATTTTGATGACAA 57.211 32.000 0.00 0.00 0.00 3.18
8730 9867 7.839907 TCCCTTTTATCCATTTTGATGACAAG 58.160 34.615 0.00 0.00 37.32 3.16
8731 9868 7.454380 TCCCTTTTATCCATTTTGATGACAAGT 59.546 33.333 0.00 0.00 37.32 3.16
8732 9869 8.748412 CCCTTTTATCCATTTTGATGACAAGTA 58.252 33.333 0.00 0.00 37.32 2.24
8739 9876 7.829725 TCCATTTTGATGACAAGTATTTCTGG 58.170 34.615 0.00 0.00 37.32 3.86
8740 9877 7.669304 TCCATTTTGATGACAAGTATTTCTGGA 59.331 33.333 0.00 0.00 37.32 3.86
8741 9878 7.756722 CCATTTTGATGACAAGTATTTCTGGAC 59.243 37.037 0.00 0.00 37.32 4.02
8742 9879 6.480524 TTTGATGACAAGTATTTCTGGACG 57.519 37.500 0.00 0.00 37.32 4.79
8743 9880 4.503910 TGATGACAAGTATTTCTGGACGG 58.496 43.478 0.00 0.00 0.00 4.79
8744 9881 4.221924 TGATGACAAGTATTTCTGGACGGA 59.778 41.667 0.00 0.00 0.00 4.69
8745 9882 4.188247 TGACAAGTATTTCTGGACGGAG 57.812 45.455 0.00 0.00 0.00 4.63
8746 9883 3.056107 TGACAAGTATTTCTGGACGGAGG 60.056 47.826 0.00 0.00 0.00 4.30
8747 9884 2.236395 ACAAGTATTTCTGGACGGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
8748 9885 2.500098 CAAGTATTTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
8749 9886 2.389715 AGTATTTCTGGACGGAGGGAG 58.610 52.381 0.00 0.00 0.00 4.30
8750 9887 2.108970 GTATTTCTGGACGGAGGGAGT 58.891 52.381 0.00 0.00 0.00 3.85
8751 9888 2.544844 ATTTCTGGACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
8752 9889 1.553706 TTTCTGGACGGAGGGAGTAC 58.446 55.000 0.00 0.00 0.00 2.73
8753 9890 0.406750 TTCTGGACGGAGGGAGTACA 59.593 55.000 0.00 0.00 0.00 2.90
8754 9891 0.629596 TCTGGACGGAGGGAGTACAT 59.370 55.000 0.00 0.00 31.16 2.29
8755 9892 0.747255 CTGGACGGAGGGAGTACATG 59.253 60.000 0.00 0.00 31.16 3.21
8756 9893 0.040646 TGGACGGAGGGAGTACATGT 59.959 55.000 2.69 2.69 0.00 3.21
8757 9894 0.460311 GGACGGAGGGAGTACATGTG 59.540 60.000 9.11 0.00 0.00 3.21
8758 9895 1.183549 GACGGAGGGAGTACATGTGT 58.816 55.000 9.11 0.00 0.00 3.72
8843 9982 6.318648 CGGATTTGGAATGTGAAGGAATAGAA 59.681 38.462 0.00 0.00 0.00 2.10
8980 10120 3.849911 CACTCTGTATGTTCGTGGACAT 58.150 45.455 0.00 0.00 42.57 3.06
9013 10153 6.346120 CGAGCCTCATTTGTATTCGTCTAATG 60.346 42.308 0.00 0.00 32.45 1.90
9015 10155 5.560953 GCCTCATTTGTATTCGTCTAATGGC 60.561 44.000 0.00 0.00 32.22 4.40
9019 10159 3.088194 TGTATTCGTCTAATGGCGTCC 57.912 47.619 0.00 0.00 0.00 4.79
9046 10186 2.165998 GGTGTAGTTGTACTCCGGAGT 58.834 52.381 37.59 37.59 45.02 3.85
9047 10187 2.163211 GGTGTAGTTGTACTCCGGAGTC 59.837 54.545 39.49 28.41 42.54 3.36
9050 10190 1.836802 AGTTGTACTCCGGAGTCTCC 58.163 55.000 39.49 26.83 42.54 3.71
9053 10193 1.305623 GTACTCCGGAGTCTCCCCA 59.694 63.158 39.49 19.42 42.54 4.96
9056 10196 1.075970 CTCCGGAGTCTCCCCATCA 60.076 63.158 24.04 0.00 31.13 3.07
9057 10197 1.381327 TCCGGAGTCTCCCCATCAC 60.381 63.158 13.54 0.00 31.13 3.06
9059 10199 1.517832 CGGAGTCTCCCCATCACAC 59.482 63.158 13.54 0.00 31.13 3.82
9060 10200 0.972983 CGGAGTCTCCCCATCACACT 60.973 60.000 13.54 0.00 31.13 3.55
9070 10210 4.651778 TCCCCATCACACTGTCTTTAAAG 58.348 43.478 9.04 9.04 0.00 1.85
9103 10259 4.201753 CGTTGAAGAGACCATGCTATGTTG 60.202 45.833 0.00 0.00 0.00 3.33
9116 10272 6.402983 CCATGCTATGTTGAAGAAAGAGTGTC 60.403 42.308 0.00 0.00 0.00 3.67
9118 10274 5.466728 TGCTATGTTGAAGAAAGAGTGTCAC 59.533 40.000 0.00 0.00 0.00 3.67
9119 10275 5.106908 GCTATGTTGAAGAAAGAGTGTCACC 60.107 44.000 0.00 0.00 0.00 4.02
9142 10298 7.441157 CACCTTCACAAGTCTTTGATGTAACTA 59.559 37.037 0.00 0.00 37.73 2.24
9173 10335 1.963515 GTTGGTGGGCTCTTTGATGTT 59.036 47.619 0.00 0.00 0.00 2.71
9174 10336 2.365293 GTTGGTGGGCTCTTTGATGTTT 59.635 45.455 0.00 0.00 0.00 2.83
9190 10352 4.017958 TGATGTTTCCTTGGTATTGCCCTA 60.018 41.667 0.00 0.00 36.04 3.53
9205 10367 2.039348 TGCCCTAACAAACCTACCAGAC 59.961 50.000 0.00 0.00 0.00 3.51
9207 10369 3.868754 GCCCTAACAAACCTACCAGACAG 60.869 52.174 0.00 0.00 0.00 3.51
9218 10380 8.311836 CAAACCTACCAGACAGTTCTTCTATTA 58.688 37.037 0.00 0.00 0.00 0.98
9219 10381 7.407393 ACCTACCAGACAGTTCTTCTATTAC 57.593 40.000 0.00 0.00 0.00 1.89
9232 10394 4.276678 TCTTCTATTACCAATGCATGCAGC 59.723 41.667 26.69 0.00 45.96 5.25
9311 10473 7.716768 TGTATGTGTCTTTGACATTTCGTTA 57.283 32.000 3.65 0.00 44.63 3.18
9315 10477 7.022055 TGTGTCTTTGACATTTCGTTATGTT 57.978 32.000 3.65 0.00 44.63 2.71
9405 10570 6.623486 TCTCTTGCATCCAAACATACATTTG 58.377 36.000 0.00 0.00 38.96 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.211045 GTTTAGGTTGGCACTGTCAGAA 58.789 45.455 6.91 0.00 0.00 3.02
36 37 2.486548 GGTTTAGGTTGGCACTGTCAGA 60.487 50.000 6.91 0.00 0.00 3.27
64 65 3.123621 CAGCAGTTGAAAGTAGGCTAACG 59.876 47.826 0.00 0.00 0.00 3.18
84 85 0.512952 GCAACGAAGTGTACTGCCAG 59.487 55.000 0.00 0.00 45.00 4.85
128 152 1.564348 ACTCCTTGGAACACAGTTGGT 59.436 47.619 0.00 0.00 39.29 3.67
166 190 2.355209 GGAAAGTACTGCCCTGGAGAAG 60.355 54.545 0.00 0.00 0.00 2.85
186 210 0.105593 AGGTCGCAGCTGACATATGG 59.894 55.000 20.43 0.00 40.72 2.74
300 324 9.785982 GCTCCTAGATATGGAAAATACTTTTCT 57.214 33.333 11.03 0.00 46.31 2.52
346 829 4.342951 ACACATCAATGATGGCCTTTATGG 59.657 41.667 24.99 0.00 43.60 2.74
359 842 7.959109 CGGATGCAACTATATAACACATCAATG 59.041 37.037 0.00 0.00 35.32 2.82
362 845 6.754193 TCGGATGCAACTATATAACACATCA 58.246 36.000 0.00 0.00 35.32 3.07
363 846 7.652300 TTCGGATGCAACTATATAACACATC 57.348 36.000 0.00 0.00 33.38 3.06
364 847 7.334421 GGATTCGGATGCAACTATATAACACAT 59.666 37.037 0.00 0.00 0.00 3.21
366 849 6.649141 TGGATTCGGATGCAACTATATAACAC 59.351 38.462 0.00 0.00 29.98 3.32
367 850 6.764379 TGGATTCGGATGCAACTATATAACA 58.236 36.000 0.00 0.00 29.98 2.41
368 851 7.849804 ATGGATTCGGATGCAACTATATAAC 57.150 36.000 0.51 0.00 37.15 1.89
373 856 8.267183 TGAATATATGGATTCGGATGCAACTAT 58.733 33.333 0.51 0.00 38.46 2.12
375 858 6.475504 TGAATATATGGATTCGGATGCAACT 58.524 36.000 0.51 0.00 38.46 3.16
376 859 6.741992 TGAATATATGGATTCGGATGCAAC 57.258 37.500 0.51 0.00 38.46 4.17
379 862 8.893219 TCTAATGAATATATGGATTCGGATGC 57.107 34.615 0.00 0.00 38.46 3.91
529 1016 7.722285 AGACTCAAGAGACTAGTCAACTTTAGT 59.278 37.037 28.76 28.76 41.69 2.24
571 1058 4.056050 GCTAACATAGTAACATGGACCCG 58.944 47.826 0.00 0.00 0.00 5.28
654 1141 4.079327 TCCTTTACGGAGGGAGTAGAAGAT 60.079 45.833 2.49 0.00 36.69 2.40
672 1159 4.202388 ACAGCAATCCAGCAATTTTCCTTT 60.202 37.500 0.00 0.00 36.85 3.11
673 1160 3.325716 ACAGCAATCCAGCAATTTTCCTT 59.674 39.130 0.00 0.00 36.85 3.36
674 1161 2.901839 ACAGCAATCCAGCAATTTTCCT 59.098 40.909 0.00 0.00 36.85 3.36
675 1162 3.256558 GACAGCAATCCAGCAATTTTCC 58.743 45.455 0.00 0.00 36.85 3.13
676 1163 3.916761 TGACAGCAATCCAGCAATTTTC 58.083 40.909 0.00 0.00 36.85 2.29
678 1165 3.863400 GCTTGACAGCAATCCAGCAATTT 60.863 43.478 8.03 0.00 46.49 1.82
679 1166 2.353406 GCTTGACAGCAATCCAGCAATT 60.353 45.455 8.03 0.00 46.49 2.32
681 1168 0.599558 GCTTGACAGCAATCCAGCAA 59.400 50.000 8.03 0.00 46.49 3.91
691 1178 7.201350 CGTAAAGAAATAATTTGGCTTGACAGC 60.201 37.037 0.00 0.00 46.52 4.40
692 1179 7.273381 CCGTAAAGAAATAATTTGGCTTGACAG 59.727 37.037 0.00 0.00 0.00 3.51
693 1180 7.040340 TCCGTAAAGAAATAATTTGGCTTGACA 60.040 33.333 0.00 0.00 0.00 3.58
694 1181 7.309920 TCCGTAAAGAAATAATTTGGCTTGAC 58.690 34.615 0.00 0.00 0.00 3.18
695 1182 7.362574 CCTCCGTAAAGAAATAATTTGGCTTGA 60.363 37.037 0.00 0.00 0.00 3.02
696 1183 6.751888 CCTCCGTAAAGAAATAATTTGGCTTG 59.248 38.462 0.00 0.00 0.00 4.01
698 1185 5.359860 CCCTCCGTAAAGAAATAATTTGGCT 59.640 40.000 0.00 0.00 0.00 4.75
700 1187 6.602009 ACTCCCTCCGTAAAGAAATAATTTGG 59.398 38.462 0.00 0.00 0.00 3.28
701 1188 7.625828 ACTCCCTCCGTAAAGAAATAATTTG 57.374 36.000 0.00 0.00 0.00 2.32
702 1189 8.323567 TGTACTCCCTCCGTAAAGAAATAATTT 58.676 33.333 0.00 0.00 0.00 1.82
703 1190 7.854337 TGTACTCCCTCCGTAAAGAAATAATT 58.146 34.615 0.00 0.00 0.00 1.40
704 1191 7.427989 TGTACTCCCTCCGTAAAGAAATAAT 57.572 36.000 0.00 0.00 0.00 1.28
705 1192 6.855763 TGTACTCCCTCCGTAAAGAAATAA 57.144 37.500 0.00 0.00 0.00 1.40
706 1193 6.438425 ACTTGTACTCCCTCCGTAAAGAAATA 59.562 38.462 0.00 0.00 0.00 1.40
708 1195 4.590222 ACTTGTACTCCCTCCGTAAAGAAA 59.410 41.667 0.00 0.00 0.00 2.52
709 1196 4.154942 ACTTGTACTCCCTCCGTAAAGAA 58.845 43.478 0.00 0.00 0.00 2.52
711 1198 4.532314 AACTTGTACTCCCTCCGTAAAG 57.468 45.455 0.00 0.00 0.00 1.85
712 1199 5.625197 GCATAACTTGTACTCCCTCCGTAAA 60.625 44.000 0.00 0.00 0.00 2.01
713 1200 4.142093 GCATAACTTGTACTCCCTCCGTAA 60.142 45.833 0.00 0.00 0.00 3.18
714 1201 3.382546 GCATAACTTGTACTCCCTCCGTA 59.617 47.826 0.00 0.00 0.00 4.02
753 1280 8.623903 TGATAAGGCACTCTGCTAAATAATTTG 58.376 33.333 0.00 0.00 44.28 2.32
821 1348 7.210174 TGTCTTCTACTGCATGATAATACCAC 58.790 38.462 0.00 0.00 0.00 4.16
1041 1570 3.039134 CCACTTTTGGGGCGTGTC 58.961 61.111 0.00 0.00 39.57 3.67
1157 1686 3.146828 GCACCAACTTGGGGGTCCT 62.147 63.158 12.22 0.00 42.59 3.85
1197 1726 6.238566 CGTCAGGATAATCTCTTACACGGTTA 60.239 42.308 0.00 0.00 0.00 2.85
1257 1786 3.901797 CTGTTCGGTGACCCTGGGC 62.902 68.421 14.08 6.42 0.00 5.36
1354 1883 9.031360 CGATCGACTAAATTTTTCCATAGAAGA 57.969 33.333 10.26 0.00 32.35 2.87
1614 2143 3.431233 CAGACTCTGTGCTTGTACATGTG 59.569 47.826 9.11 0.00 0.00 3.21
1834 2363 0.250295 TGCCGACCATTAGCATAGCC 60.250 55.000 0.00 0.00 0.00 3.93
2199 2728 4.620982 AGCTTGAAGTTGTTACCAATTGC 58.379 39.130 0.00 0.00 32.11 3.56
2427 2962 1.205417 GTAGCCATGCAATTGCCAAGT 59.795 47.619 26.94 10.75 35.16 3.16
2515 3050 1.550976 GGGGAGATCTGTCAAGAACGT 59.449 52.381 0.00 0.00 35.59 3.99
2829 3368 4.602006 CATCAGCATCAAAATGAGCTCAG 58.398 43.478 22.96 8.49 34.61 3.35
2956 3498 7.526608 CATGAACCTAAGTAAAGCAATTTCGA 58.473 34.615 0.00 0.00 0.00 3.71
3044 3586 8.801715 AATATTATTTTGGCTCAATACTTGCG 57.198 30.769 0.00 0.00 0.00 4.85
3199 3744 8.074474 TGCAAACATCAACATTACAGAAATTG 57.926 30.769 0.00 0.00 0.00 2.32
3261 3806 8.116026 ACCTGGTATGGAGATGAGTTTATTTTT 58.884 33.333 0.00 0.00 0.00 1.94
3262 3807 7.643123 ACCTGGTATGGAGATGAGTTTATTTT 58.357 34.615 0.00 0.00 0.00 1.82
3263 3808 7.213178 ACCTGGTATGGAGATGAGTTTATTT 57.787 36.000 0.00 0.00 0.00 1.40
3264 3809 6.831664 ACCTGGTATGGAGATGAGTTTATT 57.168 37.500 0.00 0.00 0.00 1.40
3265 3810 6.831664 AACCTGGTATGGAGATGAGTTTAT 57.168 37.500 0.00 0.00 0.00 1.40
3266 3811 6.183360 GCTAACCTGGTATGGAGATGAGTTTA 60.183 42.308 0.00 0.00 0.00 2.01
3267 3812 5.396884 GCTAACCTGGTATGGAGATGAGTTT 60.397 44.000 0.00 0.00 0.00 2.66
3268 3813 4.101741 GCTAACCTGGTATGGAGATGAGTT 59.898 45.833 0.00 0.00 0.00 3.01
3269 3814 3.643792 GCTAACCTGGTATGGAGATGAGT 59.356 47.826 0.00 0.00 0.00 3.41
3270 3815 3.643320 TGCTAACCTGGTATGGAGATGAG 59.357 47.826 0.00 0.00 0.00 2.90
3271 3816 3.653164 TGCTAACCTGGTATGGAGATGA 58.347 45.455 0.00 0.00 0.00 2.92
3272 3817 4.630644 ATGCTAACCTGGTATGGAGATG 57.369 45.455 0.00 0.00 0.00 2.90
3273 3818 6.959606 AATATGCTAACCTGGTATGGAGAT 57.040 37.500 0.00 0.00 0.00 2.75
3274 3819 6.101150 ACAAATATGCTAACCTGGTATGGAGA 59.899 38.462 0.00 0.00 0.00 3.71
3275 3820 6.299141 ACAAATATGCTAACCTGGTATGGAG 58.701 40.000 0.00 0.00 0.00 3.86
3276 3821 6.260700 ACAAATATGCTAACCTGGTATGGA 57.739 37.500 0.00 0.00 0.00 3.41
3476 4028 8.349983 CGGAGGTAATATTATGGAAAACCTTTG 58.650 37.037 5.51 0.00 36.04 2.77
3521 4073 6.635239 CGTTCCAAAATAAATGTCGTGAAACT 59.365 34.615 0.00 0.00 31.75 2.66
3533 4085 4.376225 ACTCCCTCCGTTCCAAAATAAA 57.624 40.909 0.00 0.00 0.00 1.40
4121 4680 5.663795 ATGCATTAGATACTTGTTCTGCG 57.336 39.130 0.00 0.00 0.00 5.18
4217 4776 5.795441 GTGTTCAGTCTTGTTTCTGTGTTTC 59.205 40.000 0.00 0.00 33.89 2.78
4229 4789 3.871006 TGCAGTGTTAGTGTTCAGTCTTG 59.129 43.478 0.00 0.00 0.00 3.02
4234 4794 4.094887 ACAAACTGCAGTGTTAGTGTTCAG 59.905 41.667 22.49 1.59 0.00 3.02
4287 4888 6.550854 CCATTTTGTTATGACATATGGGACCT 59.449 38.462 17.70 0.00 40.79 3.85
4507 5138 7.650834 TGCAACCATTATTTTCTTTAACTGC 57.349 32.000 0.00 0.00 0.00 4.40
4728 5368 1.272928 ACAGCCCAGAGATGAGACAGA 60.273 52.381 0.00 0.00 0.00 3.41
5269 5912 5.050769 GCTGACTGTGATGTTGAATATACCG 60.051 44.000 0.00 0.00 0.00 4.02
5353 5996 1.482182 CAATGGATCGGAGTGAGGTCA 59.518 52.381 0.00 0.00 0.00 4.02
5416 6059 3.221771 CAGACACTGGATTTGGAAACCA 58.778 45.455 0.00 0.00 0.00 3.67
5461 6104 2.267351 CCAGATGCGGTTGTTGGCA 61.267 57.895 0.00 0.00 44.29 4.92
5469 6112 1.347707 TGAAGAAGAACCAGATGCGGT 59.652 47.619 0.00 0.00 42.71 5.68
5513 6156 2.184579 GGCCTTTCGTCCGAGGAG 59.815 66.667 0.00 0.00 34.91 3.69
5645 6288 1.610038 TGTGTTGCCAGCTTGAATCTG 59.390 47.619 0.00 0.00 0.00 2.90
5670 6313 2.074576 CTGTTCTGATGCCTGTGTCTG 58.925 52.381 0.00 0.00 0.00 3.51
5671 6314 1.610102 GCTGTTCTGATGCCTGTGTCT 60.610 52.381 0.00 0.00 0.00 3.41
5672 6315 0.801251 GCTGTTCTGATGCCTGTGTC 59.199 55.000 0.00 0.00 0.00 3.67
5673 6316 0.607489 GGCTGTTCTGATGCCTGTGT 60.607 55.000 8.84 0.00 43.05 3.72
5706 6349 5.127356 GGCCAGAGTTGACTAGTAACAGTAT 59.873 44.000 0.00 0.00 0.00 2.12
5836 6479 0.313672 GCATCGGCAACAAGGTCAAA 59.686 50.000 0.00 0.00 40.72 2.69
5941 6584 7.689953 TCTTCTTACTAAACGTGTGTTTCTC 57.310 36.000 0.00 0.00 44.94 2.87
5964 6615 2.093658 TGGGTTACGATTCCTCTGCTTC 60.094 50.000 0.00 0.00 0.00 3.86
5967 6618 2.158957 TGATGGGTTACGATTCCTCTGC 60.159 50.000 0.00 0.00 0.00 4.26
5968 6619 3.458189 GTGATGGGTTACGATTCCTCTG 58.542 50.000 0.00 0.00 0.00 3.35
5986 6643 1.254026 AGATTCACTTCGTCCCGTGA 58.746 50.000 0.00 0.00 38.30 4.35
5989 6646 1.067142 TCCAAGATTCACTTCGTCCCG 60.067 52.381 0.00 0.00 36.61 5.14
5990 6647 2.762535 TCCAAGATTCACTTCGTCCC 57.237 50.000 0.00 0.00 36.61 4.46
5991 6648 3.926616 TCTTCCAAGATTCACTTCGTCC 58.073 45.455 0.00 0.00 36.61 4.79
5992 6649 4.390297 CCTTCTTCCAAGATTCACTTCGTC 59.610 45.833 0.00 0.00 36.61 4.20
5999 6656 3.140144 ACAACCCCTTCTTCCAAGATTCA 59.860 43.478 0.00 0.00 34.49 2.57
6007 6664 5.417894 CAGGTAATTAACAACCCCTTCTTCC 59.582 44.000 2.78 0.00 36.34 3.46
6012 6669 4.264217 CCTCCAGGTAATTAACAACCCCTT 60.264 45.833 2.78 0.00 36.34 3.95
6013 6670 3.268595 CCTCCAGGTAATTAACAACCCCT 59.731 47.826 2.78 0.00 36.34 4.79
6015 6672 3.628008 CCCTCCAGGTAATTAACAACCC 58.372 50.000 2.78 0.00 36.34 4.11
6016 6673 3.021695 GCCCTCCAGGTAATTAACAACC 58.978 50.000 2.78 0.00 38.26 3.77
6018 6675 2.356330 CCGCCCTCCAGGTAATTAACAA 60.356 50.000 2.78 0.00 38.26 2.83
6019 6676 1.210967 CCGCCCTCCAGGTAATTAACA 59.789 52.381 2.78 0.00 38.26 2.41
6215 6882 0.103208 ACCTCGTCTCGCATCAATCC 59.897 55.000 0.00 0.00 0.00 3.01
6288 6955 2.037367 TGCTGCTACCTCCTCCGT 59.963 61.111 0.00 0.00 0.00 4.69
6475 7345 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6476 7346 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6477 7347 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6478 7348 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6479 7349 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
6480 7350 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
6481 7351 4.871822 TGAGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
6482 7352 4.501229 GCTGAGAGAGAGAGAGAGAGAGAG 60.501 54.167 0.00 0.00 0.00 3.20
6483 7353 3.386078 GCTGAGAGAGAGAGAGAGAGAGA 59.614 52.174 0.00 0.00 0.00 3.10
6484 7354 3.133542 TGCTGAGAGAGAGAGAGAGAGAG 59.866 52.174 0.00 0.00 0.00 3.20
6485 7355 3.106827 TGCTGAGAGAGAGAGAGAGAGA 58.893 50.000 0.00 0.00 0.00 3.10
6486 7356 3.464907 CTGCTGAGAGAGAGAGAGAGAG 58.535 54.545 0.00 0.00 0.00 3.20
6487 7357 2.420547 GCTGCTGAGAGAGAGAGAGAGA 60.421 54.545 0.00 0.00 0.00 3.10
6488 7358 1.945394 GCTGCTGAGAGAGAGAGAGAG 59.055 57.143 0.00 0.00 0.00 3.20
6564 7434 1.068083 CCATCACACGGGATCGGAG 59.932 63.158 0.00 0.00 41.39 4.63
6575 7445 3.190327 CGTTGGCTTGTAAATCCATCACA 59.810 43.478 0.00 0.00 42.45 3.58
6592 7462 5.291614 CCATCAATTGAAAAATAGCCGTTGG 59.708 40.000 13.09 7.05 0.00 3.77
6631 7505 4.283722 GGGTCAAGTGAGGTTTCTCTCTTA 59.716 45.833 9.44 0.00 46.16 2.10
6675 7549 2.985847 AGCCAAAGAGCCAACCGC 60.986 61.111 0.00 0.00 37.98 5.68
6677 7551 2.935740 GCCAGCCAAAGAGCCAACC 61.936 63.158 0.00 0.00 0.00 3.77
6678 7552 1.905354 AGCCAGCCAAAGAGCCAAC 60.905 57.895 0.00 0.00 0.00 3.77
6679 7553 1.904865 CAGCCAGCCAAAGAGCCAA 60.905 57.895 0.00 0.00 0.00 4.52
6680 7554 2.282674 CAGCCAGCCAAAGAGCCA 60.283 61.111 0.00 0.00 0.00 4.75
6681 7555 3.756727 GCAGCCAGCCAAAGAGCC 61.757 66.667 0.00 0.00 37.23 4.70
6701 7575 0.620556 TCCAGCCCACAAAGAGGATC 59.379 55.000 0.00 0.00 0.00 3.36
6792 7684 0.103937 CTGCCCATCTTCTCGGAGAC 59.896 60.000 7.33 0.00 0.00 3.36
6793 7685 1.680522 GCTGCCCATCTTCTCGGAGA 61.681 60.000 2.97 2.97 0.00 3.71
6794 7686 1.227497 GCTGCCCATCTTCTCGGAG 60.227 63.158 0.00 0.00 0.00 4.63
6795 7687 2.735772 GGCTGCCCATCTTCTCGGA 61.736 63.158 7.66 0.00 0.00 4.55
6796 7688 2.203126 GGCTGCCCATCTTCTCGG 60.203 66.667 7.66 0.00 0.00 4.63
6842 7734 1.001269 TCTCCTTCCTTCCTCGCGA 60.001 57.895 9.26 9.26 0.00 5.87
6874 7766 2.380410 CCTTCGTGGTCGCCTTTCG 61.380 63.158 0.00 0.00 40.15 3.46
7009 7905 0.114168 ACAGGACACTCTCAGAGCCT 59.886 55.000 0.00 0.00 32.04 4.58
7103 8195 2.298446 TGCATCCGAAAATGAAAGGCAA 59.702 40.909 0.00 0.00 0.00 4.52
7106 8198 3.307782 GCAATGCATCCGAAAATGAAAGG 59.692 43.478 0.00 0.00 0.00 3.11
7147 8269 8.257602 ACCTCCACAACCTGTTTTATTTATTT 57.742 30.769 0.00 0.00 0.00 1.40
7148 8270 7.849322 ACCTCCACAACCTGTTTTATTTATT 57.151 32.000 0.00 0.00 0.00 1.40
7150 8272 7.064229 AGAACCTCCACAACCTGTTTTATTTA 58.936 34.615 0.00 0.00 0.00 1.40
7154 8276 4.080243 TGAGAACCTCCACAACCTGTTTTA 60.080 41.667 0.00 0.00 0.00 1.52
7346 8471 7.834881 AGGATCATCATCATAATGCAAAACT 57.165 32.000 0.00 0.00 32.58 2.66
7395 8520 4.383880 GGGTAACTGGTAGATCAAAGGGAC 60.384 50.000 0.00 0.00 0.00 4.46
7536 8668 8.421249 AAGGAAGGACAATGAAAACATTCATA 57.579 30.769 4.62 0.00 40.51 2.15
7561 8693 7.523293 AAATGTTCACAACCAATGAGATGTA 57.477 32.000 0.00 0.00 0.00 2.29
7564 8696 8.805175 TGATAAAATGTTCACAACCAATGAGAT 58.195 29.630 0.00 0.00 0.00 2.75
7716 8848 4.025229 CGTTAGCAAATAAGGCTGCGAATA 60.025 41.667 0.00 0.00 43.51 1.75
7720 8852 1.856014 GCGTTAGCAAATAAGGCTGCG 60.856 52.381 0.00 0.00 46.78 5.18
7865 8997 9.828039 AAAAGACTTATATTTAGGAACGTAGGG 57.172 33.333 0.00 0.00 0.00 3.53
7926 9058 9.851686 TGAATCTACATTCTAAAACATGCCTAT 57.148 29.630 0.00 0.00 39.49 2.57
7927 9059 9.109393 GTGAATCTACATTCTAAAACATGCCTA 57.891 33.333 0.00 0.00 39.49 3.93
7928 9060 7.831193 AGTGAATCTACATTCTAAAACATGCCT 59.169 33.333 0.00 0.00 39.49 4.75
7929 9061 7.989826 AGTGAATCTACATTCTAAAACATGCC 58.010 34.615 0.00 0.00 39.49 4.40
7930 9062 8.668353 TGAGTGAATCTACATTCTAAAACATGC 58.332 33.333 0.00 0.00 39.49 4.06
7940 9072 9.055248 CGAAACAAAATGAGTGAATCTACATTC 57.945 33.333 0.00 0.00 39.24 2.67
7941 9073 8.567948 ACGAAACAAAATGAGTGAATCTACATT 58.432 29.630 0.00 0.00 34.99 2.71
7942 9074 8.099364 ACGAAACAAAATGAGTGAATCTACAT 57.901 30.769 0.00 0.00 0.00 2.29
7943 9075 7.490962 ACGAAACAAAATGAGTGAATCTACA 57.509 32.000 0.00 0.00 0.00 2.74
7944 9076 9.478019 CATACGAAACAAAATGAGTGAATCTAC 57.522 33.333 0.00 0.00 0.00 2.59
7945 9077 9.214957 ACATACGAAACAAAATGAGTGAATCTA 57.785 29.630 0.00 0.00 0.00 1.98
7946 9078 8.017373 CACATACGAAACAAAATGAGTGAATCT 58.983 33.333 0.00 0.00 0.00 2.40
7947 9079 7.271223 CCACATACGAAACAAAATGAGTGAATC 59.729 37.037 0.00 0.00 0.00 2.52
7948 9080 7.083858 CCACATACGAAACAAAATGAGTGAAT 58.916 34.615 0.00 0.00 0.00 2.57
7949 9081 6.038825 ACCACATACGAAACAAAATGAGTGAA 59.961 34.615 0.00 0.00 0.00 3.18
7950 9082 5.529430 ACCACATACGAAACAAAATGAGTGA 59.471 36.000 0.00 0.00 0.00 3.41
7951 9083 5.757886 ACCACATACGAAACAAAATGAGTG 58.242 37.500 0.00 0.00 0.00 3.51
7952 9084 5.048991 GGACCACATACGAAACAAAATGAGT 60.049 40.000 0.00 0.00 0.00 3.41
7953 9085 5.049060 TGGACCACATACGAAACAAAATGAG 60.049 40.000 0.00 0.00 0.00 2.90
7954 9086 4.822350 TGGACCACATACGAAACAAAATGA 59.178 37.500 0.00 0.00 0.00 2.57
7955 9087 5.114785 TGGACCACATACGAAACAAAATG 57.885 39.130 0.00 0.00 0.00 2.32
7956 9088 5.975693 ATGGACCACATACGAAACAAAAT 57.024 34.783 0.00 0.00 38.26 1.82
7957 9089 7.175119 TCAATATGGACCACATACGAAACAAAA 59.825 33.333 0.00 0.00 44.41 2.44
7958 9090 6.655425 TCAATATGGACCACATACGAAACAAA 59.345 34.615 0.00 0.00 44.41 2.83
7959 9091 6.174049 TCAATATGGACCACATACGAAACAA 58.826 36.000 0.00 0.00 44.41 2.83
7960 9092 5.735766 TCAATATGGACCACATACGAAACA 58.264 37.500 0.00 0.00 44.41 2.83
7961 9093 6.671614 TTCAATATGGACCACATACGAAAC 57.328 37.500 0.00 0.00 44.41 2.78
7962 9094 7.773224 AGATTTCAATATGGACCACATACGAAA 59.227 33.333 10.92 10.92 44.41 3.46
7963 9095 7.279615 AGATTTCAATATGGACCACATACGAA 58.720 34.615 0.00 0.00 44.41 3.85
7964 9096 6.826668 AGATTTCAATATGGACCACATACGA 58.173 36.000 0.00 0.00 44.41 3.43
7965 9097 6.931281 AGAGATTTCAATATGGACCACATACG 59.069 38.462 0.00 0.00 44.41 3.06
7966 9098 9.778741 TTAGAGATTTCAATATGGACCACATAC 57.221 33.333 0.00 0.00 44.41 2.39
7968 9100 9.699410 TTTTAGAGATTTCAATATGGACCACAT 57.301 29.630 0.00 0.00 43.68 3.21
7969 9101 9.527157 TTTTTAGAGATTTCAATATGGACCACA 57.473 29.630 0.00 0.00 0.00 4.17
7971 9103 9.973661 TCTTTTTAGAGATTTCAATATGGACCA 57.026 29.630 0.00 0.00 0.00 4.02
7991 9123 8.797438 CCTCTGCTCCTAAATTTAAGTCTTTTT 58.203 33.333 0.00 0.00 0.00 1.94
7992 9124 7.394641 CCCTCTGCTCCTAAATTTAAGTCTTTT 59.605 37.037 0.00 0.00 0.00 2.27
7993 9125 6.887002 CCCTCTGCTCCTAAATTTAAGTCTTT 59.113 38.462 0.00 0.00 0.00 2.52
7994 9126 6.215636 TCCCTCTGCTCCTAAATTTAAGTCTT 59.784 38.462 0.00 0.00 0.00 3.01
7995 9127 5.726793 TCCCTCTGCTCCTAAATTTAAGTCT 59.273 40.000 0.00 0.00 0.00 3.24
7996 9128 5.990668 TCCCTCTGCTCCTAAATTTAAGTC 58.009 41.667 0.00 0.00 0.00 3.01
7997 9129 5.489278 ACTCCCTCTGCTCCTAAATTTAAGT 59.511 40.000 0.00 0.00 0.00 2.24
7998 9130 5.995446 ACTCCCTCTGCTCCTAAATTTAAG 58.005 41.667 0.00 0.00 0.00 1.85
7999 9131 6.672657 AGTACTCCCTCTGCTCCTAAATTTAA 59.327 38.462 0.00 0.00 0.00 1.52
8000 9132 6.203072 AGTACTCCCTCTGCTCCTAAATTTA 58.797 40.000 0.00 0.00 0.00 1.40
8001 9133 5.033522 AGTACTCCCTCTGCTCCTAAATTT 58.966 41.667 0.00 0.00 0.00 1.82
8002 9134 4.625963 AGTACTCCCTCTGCTCCTAAATT 58.374 43.478 0.00 0.00 0.00 1.82
8003 9135 4.273300 AGTACTCCCTCTGCTCCTAAAT 57.727 45.455 0.00 0.00 0.00 1.40
8004 9136 3.759815 AGTACTCCCTCTGCTCCTAAA 57.240 47.619 0.00 0.00 0.00 1.85
8005 9137 6.721843 ATATAGTACTCCCTCTGCTCCTAA 57.278 41.667 0.00 0.00 0.00 2.69
8006 9138 6.126710 GCTATATAGTACTCCCTCTGCTCCTA 60.127 46.154 11.38 0.00 0.00 2.94
8007 9139 5.339695 GCTATATAGTACTCCCTCTGCTCCT 60.340 48.000 11.38 0.00 0.00 3.69
8008 9140 4.885325 GCTATATAGTACTCCCTCTGCTCC 59.115 50.000 11.38 0.00 0.00 4.70
8009 9141 5.751586 AGCTATATAGTACTCCCTCTGCTC 58.248 45.833 11.38 0.00 0.00 4.26
8010 9142 5.491078 AGAGCTATATAGTACTCCCTCTGCT 59.509 44.000 11.38 3.76 0.00 4.24
8011 9143 5.751586 AGAGCTATATAGTACTCCCTCTGC 58.248 45.833 11.38 0.00 0.00 4.26
8012 9144 6.069905 TGGAGAGCTATATAGTACTCCCTCTG 60.070 46.154 30.99 4.66 41.86 3.35
8013 9145 6.033348 TGGAGAGCTATATAGTACTCCCTCT 58.967 44.000 30.99 23.21 41.86 3.69
8014 9146 6.157297 TCTGGAGAGCTATATAGTACTCCCTC 59.843 46.154 30.99 20.40 41.86 4.30
8015 9147 6.033348 TCTGGAGAGCTATATAGTACTCCCT 58.967 44.000 30.99 15.40 41.86 4.20
8016 9148 6.117488 GTCTGGAGAGCTATATAGTACTCCC 58.883 48.000 30.99 22.15 41.86 4.30
8017 9149 6.713276 TGTCTGGAGAGCTATATAGTACTCC 58.287 44.000 29.45 29.45 42.32 3.85
8018 9150 9.893634 TTATGTCTGGAGAGCTATATAGTACTC 57.106 37.037 20.09 20.09 0.00 2.59
8019 9151 9.675464 GTTATGTCTGGAGAGCTATATAGTACT 57.325 37.037 11.38 10.28 0.00 2.73
8020 9152 8.895737 GGTTATGTCTGGAGAGCTATATAGTAC 58.104 40.741 11.38 6.02 0.00 2.73
8021 9153 7.769507 CGGTTATGTCTGGAGAGCTATATAGTA 59.230 40.741 11.38 0.00 0.00 1.82
8030 9162 1.204941 ACACGGTTATGTCTGGAGAGC 59.795 52.381 0.00 0.00 0.00 4.09
8034 9166 3.973206 AATCACACGGTTATGTCTGGA 57.027 42.857 0.00 0.00 0.00 3.86
8035 9167 5.410132 TGTTTAATCACACGGTTATGTCTGG 59.590 40.000 0.00 0.00 0.00 3.86
8074 9206 3.460103 ACAAGTTTCTGCAGGCAAAATG 58.540 40.909 15.13 12.28 0.00 2.32
8102 9235 7.806934 ATGTTAGCATGGATTCCCTTTAGGAAA 60.807 37.037 0.00 0.00 45.12 3.13
8108 9241 7.125391 TCTTTATGTTAGCATGGATTCCCTTT 58.875 34.615 1.80 0.00 36.58 3.11
8135 9268 2.943033 GGCGTGCCAGTAATAAACATCT 59.057 45.455 5.89 0.00 35.81 2.90
8180 9313 5.044558 GGGAAGTGCATTTAAAACACGAAA 58.955 37.500 15.20 0.00 39.31 3.46
8183 9316 3.005367 AGGGGAAGTGCATTTAAAACACG 59.995 43.478 15.20 0.00 39.31 4.49
8184 9317 4.202212 ACAGGGGAAGTGCATTTAAAACAC 60.202 41.667 13.95 13.95 34.48 3.32
8212 9345 2.469826 TCGTCGTGCATGGTTATCATC 58.530 47.619 5.98 0.00 32.92 2.92
8309 9442 9.461312 TTCAGGCTGTTTTAGTTTACATGATAT 57.539 29.630 15.27 0.00 0.00 1.63
8443 9577 1.204467 GGCATGCCAAATTTTCTCGGA 59.796 47.619 32.08 0.00 35.81 4.55
8464 9598 1.523484 TTCAGCTGAACTGCGTGCA 60.523 52.632 25.16 0.00 46.76 4.57
8512 9646 3.790437 CCGGCAGGCTCCATGACT 61.790 66.667 0.00 0.00 0.00 3.41
8542 9676 3.824443 CGTTTCCCCACTCCAAAATACTT 59.176 43.478 0.00 0.00 0.00 2.24
8630 9767 3.933332 GACAAGTATTTTCGGACAGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
8631 9768 4.566004 TGACAAGTATTTTCGGACAGAGG 58.434 43.478 0.00 0.00 0.00 3.69
8632 9769 5.869344 TGATGACAAGTATTTTCGGACAGAG 59.131 40.000 0.00 0.00 0.00 3.35
8633 9770 5.789521 TGATGACAAGTATTTTCGGACAGA 58.210 37.500 0.00 0.00 0.00 3.41
8634 9771 6.480524 TTGATGACAAGTATTTTCGGACAG 57.519 37.500 0.00 0.00 0.00 3.51
8635 9772 6.869315 TTTGATGACAAGTATTTTCGGACA 57.131 33.333 0.00 0.00 37.32 4.02
8636 9773 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
8637 9774 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
8638 9775 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
8639 9776 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
8682 9819 9.978044 GGGATGTATCTAGACGTATTTTAGTTT 57.022 33.333 0.00 0.00 0.00 2.66
8683 9820 9.364653 AGGGATGTATCTAGACGTATTTTAGTT 57.635 33.333 0.00 0.00 0.00 2.24
8684 9821 8.937207 AGGGATGTATCTAGACGTATTTTAGT 57.063 34.615 0.00 0.00 0.00 2.24
8690 9827 8.968969 GGATAAAAGGGATGTATCTAGACGTAT 58.031 37.037 0.00 0.00 0.00 3.06
8691 9828 7.946219 TGGATAAAAGGGATGTATCTAGACGTA 59.054 37.037 0.00 0.00 0.00 3.57
8692 9829 6.781014 TGGATAAAAGGGATGTATCTAGACGT 59.219 38.462 0.00 0.00 0.00 4.34
8693 9830 7.228314 TGGATAAAAGGGATGTATCTAGACG 57.772 40.000 0.00 0.00 0.00 4.18
8698 9835 9.887862 ATCAAAATGGATAAAAGGGATGTATCT 57.112 29.630 0.00 0.00 0.00 1.98
8699 9836 9.918630 CATCAAAATGGATAAAAGGGATGTATC 57.081 33.333 0.00 0.00 0.00 2.24
8700 9837 9.659135 TCATCAAAATGGATAAAAGGGATGTAT 57.341 29.630 0.00 0.00 33.29 2.29
8701 9838 8.912988 GTCATCAAAATGGATAAAAGGGATGTA 58.087 33.333 0.00 0.00 33.29 2.29
8702 9839 7.399765 TGTCATCAAAATGGATAAAAGGGATGT 59.600 33.333 0.00 0.00 33.29 3.06
8703 9840 7.784037 TGTCATCAAAATGGATAAAAGGGATG 58.216 34.615 0.00 0.00 33.42 3.51
8704 9841 7.976414 TGTCATCAAAATGGATAAAAGGGAT 57.024 32.000 0.00 0.00 33.42 3.85
8705 9842 7.454380 ACTTGTCATCAAAATGGATAAAAGGGA 59.546 33.333 0.00 0.00 33.42 4.20
8706 9843 7.614494 ACTTGTCATCAAAATGGATAAAAGGG 58.386 34.615 0.00 0.00 33.42 3.95
8713 9850 8.472413 CCAGAAATACTTGTCATCAAAATGGAT 58.528 33.333 0.00 0.00 33.42 3.41
8714 9851 7.669304 TCCAGAAATACTTGTCATCAAAATGGA 59.331 33.333 0.00 0.00 33.42 3.41
8715 9852 7.756722 GTCCAGAAATACTTGTCATCAAAATGG 59.243 37.037 0.00 0.00 33.42 3.16
8716 9853 7.482743 CGTCCAGAAATACTTGTCATCAAAATG 59.517 37.037 0.00 0.00 32.87 2.32
8717 9854 7.362056 CCGTCCAGAAATACTTGTCATCAAAAT 60.362 37.037 0.00 0.00 32.87 1.82
8718 9855 6.072728 CCGTCCAGAAATACTTGTCATCAAAA 60.073 38.462 0.00 0.00 32.87 2.44
8719 9856 5.411361 CCGTCCAGAAATACTTGTCATCAAA 59.589 40.000 0.00 0.00 32.87 2.69
8720 9857 4.935205 CCGTCCAGAAATACTTGTCATCAA 59.065 41.667 0.00 0.00 0.00 2.57
8721 9858 4.221924 TCCGTCCAGAAATACTTGTCATCA 59.778 41.667 0.00 0.00 0.00 3.07
8722 9859 4.755411 TCCGTCCAGAAATACTTGTCATC 58.245 43.478 0.00 0.00 0.00 2.92
8723 9860 4.383118 CCTCCGTCCAGAAATACTTGTCAT 60.383 45.833 0.00 0.00 0.00 3.06
8724 9861 3.056107 CCTCCGTCCAGAAATACTTGTCA 60.056 47.826 0.00 0.00 0.00 3.58
8725 9862 3.522553 CCTCCGTCCAGAAATACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
8726 9863 2.236395 CCCTCCGTCCAGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
8727 9864 2.500098 TCCCTCCGTCCAGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
8728 9865 2.766828 CTCCCTCCGTCCAGAAATACTT 59.233 50.000 0.00 0.00 0.00 2.24
8729 9866 2.292323 ACTCCCTCCGTCCAGAAATACT 60.292 50.000 0.00 0.00 0.00 2.12
8730 9867 2.108970 ACTCCCTCCGTCCAGAAATAC 58.891 52.381 0.00 0.00 0.00 1.89
8731 9868 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
8732 9869 2.108970 GTACTCCCTCCGTCCAGAAAT 58.891 52.381 0.00 0.00 0.00 2.17
8733 9870 1.203087 TGTACTCCCTCCGTCCAGAAA 60.203 52.381 0.00 0.00 0.00 2.52
8734 9871 0.406750 TGTACTCCCTCCGTCCAGAA 59.593 55.000 0.00 0.00 0.00 3.02
8735 9872 0.629596 ATGTACTCCCTCCGTCCAGA 59.370 55.000 0.00 0.00 0.00 3.86
8736 9873 0.747255 CATGTACTCCCTCCGTCCAG 59.253 60.000 0.00 0.00 0.00 3.86
8737 9874 0.040646 ACATGTACTCCCTCCGTCCA 59.959 55.000 0.00 0.00 0.00 4.02
8738 9875 0.460311 CACATGTACTCCCTCCGTCC 59.540 60.000 0.00 0.00 0.00 4.79
8739 9876 1.183549 ACACATGTACTCCCTCCGTC 58.816 55.000 0.00 0.00 0.00 4.79
8740 9877 1.640917 AACACATGTACTCCCTCCGT 58.359 50.000 0.00 0.00 0.00 4.69
8741 9878 2.762535 AAACACATGTACTCCCTCCG 57.237 50.000 0.00 0.00 0.00 4.63
8776 9913 0.788995 ACTCGTCGAGTACAGACACG 59.211 55.000 25.94 10.16 41.51 4.49
8980 10120 0.976641 AAATGAGGCTCGACACCTGA 59.023 50.000 10.42 0.00 37.77 3.86
9019 10159 2.975851 GAGTACAACTACACCGTCAACG 59.024 50.000 0.00 0.00 39.44 4.10
9036 10176 0.185416 GATGGGGAGACTCCGGAGTA 59.815 60.000 36.38 20.63 42.66 2.59
9046 10186 2.030027 AAGACAGTGTGATGGGGAGA 57.970 50.000 0.00 0.00 0.00 3.71
9047 10187 2.867109 AAAGACAGTGTGATGGGGAG 57.133 50.000 0.00 0.00 0.00 4.30
9050 10190 5.182001 CCTTCTTTAAAGACAGTGTGATGGG 59.818 44.000 17.51 4.20 34.13 4.00
9053 10193 7.509546 TCTTCCTTCTTTAAAGACAGTGTGAT 58.490 34.615 17.51 0.00 34.13 3.06
9056 10196 6.647067 CGATCTTCCTTCTTTAAAGACAGTGT 59.353 38.462 17.51 0.00 34.13 3.55
9057 10197 6.647067 ACGATCTTCCTTCTTTAAAGACAGTG 59.353 38.462 17.51 8.22 34.13 3.66
9059 10199 7.385205 TCAACGATCTTCCTTCTTTAAAGACAG 59.615 37.037 17.51 16.01 34.13 3.51
9060 10200 7.214381 TCAACGATCTTCCTTCTTTAAAGACA 58.786 34.615 17.51 8.34 34.13 3.41
9070 10210 4.177783 GGTCTCTTCAACGATCTTCCTTC 58.822 47.826 0.00 0.00 0.00 3.46
9103 10259 4.442706 TGTGAAGGTGACACTCTTTCTTC 58.557 43.478 5.39 9.59 38.81 2.87
9116 10272 6.260936 AGTTACATCAAAGACTTGTGAAGGTG 59.739 38.462 0.00 0.00 33.94 4.00
9118 10274 6.867662 AGTTACATCAAAGACTTGTGAAGG 57.132 37.500 0.00 0.00 33.94 3.46
9119 10275 8.594881 AGTAGTTACATCAAAGACTTGTGAAG 57.405 34.615 0.00 0.00 33.94 3.02
9142 10298 3.763897 GAGCCCACCAACATTATTGAAGT 59.236 43.478 0.00 0.00 0.00 3.01
9173 10335 4.390129 TTGTTAGGGCAATACCAAGGAA 57.610 40.909 0.00 0.00 42.05 3.36
9174 10336 4.083565 GTTTGTTAGGGCAATACCAAGGA 58.916 43.478 0.00 0.00 42.05 3.36
9190 10352 4.772886 AGAACTGTCTGGTAGGTTTGTT 57.227 40.909 0.00 0.00 30.83 2.83
9205 10367 6.183360 TGCATGCATTGGTAATAGAAGAACTG 60.183 38.462 18.46 0.00 0.00 3.16
9207 10369 6.135290 TGCATGCATTGGTAATAGAAGAAC 57.865 37.500 18.46 0.00 0.00 3.01
9218 10380 3.454573 CCGGCTGCATGCATTGGT 61.455 61.111 22.97 0.00 45.15 3.67
9219 10381 4.884257 GCCGGCTGCATGCATTGG 62.884 66.667 22.97 22.44 45.15 3.16
9232 10394 3.013921 ACATTATACTTGGTTGTGCCGG 58.986 45.455 0.00 0.00 41.21 6.13
9278 10440 6.529829 TGTCAAAGACACATACAAACTTTTGC 59.470 34.615 1.49 0.00 38.42 3.68
9311 10473 1.933021 TGGACCGGAGTACTGAACAT 58.067 50.000 9.46 0.00 0.00 2.71
9315 10477 1.342174 GTGTTTGGACCGGAGTACTGA 59.658 52.381 9.46 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.