Multiple sequence alignment - TraesCS6B01G299600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G299600 chr6B 100.000 4881 0 0 1 4881 537467083 537462203 0.000000e+00 9014.0
1 TraesCS6B01G299600 chr6B 88.506 87 10 0 3406 3492 355121922 355122008 6.680000e-19 106.0
2 TraesCS6B01G299600 chr6B 96.875 32 1 0 3299 3330 638421735 638421766 2.000000e-03 54.7
3 TraesCS6B01G299600 chr6D 93.267 3327 139 33 1 3294 356287271 356283997 0.000000e+00 4824.0
4 TraesCS6B01G299600 chr6D 92.357 785 39 10 3549 4322 356283884 356283110 0.000000e+00 1098.0
5 TraesCS6B01G299600 chr6D 90.000 100 10 0 4384 4483 356283108 356283009 3.960000e-26 130.0
6 TraesCS6B01G299600 chr6D 85.227 88 11 1 3406 3491 429008716 429008803 6.730000e-14 89.8
7 TraesCS6B01G299600 chr6A 91.369 2213 112 24 98 2288 498955065 498952910 0.000000e+00 2955.0
8 TraesCS6B01G299600 chr6A 91.821 1027 53 18 2287 3297 498952652 498951641 0.000000e+00 1402.0
9 TraesCS6B01G299600 chr6A 95.504 734 29 4 3541 4273 498951493 498950763 0.000000e+00 1170.0
10 TraesCS6B01G299600 chr6A 89.865 148 10 5 4737 4881 498950127 498949982 8.340000e-43 185.0
11 TraesCS6B01G299600 chr3D 91.954 87 5 2 3406 3491 595701402 595701487 2.390000e-23 121.0
12 TraesCS6B01G299600 chr5B 90.909 66 5 1 3344 3408 698622867 698622802 2.420000e-13 87.9
13 TraesCS6B01G299600 chr5B 96.875 32 1 0 3299 3330 622329012 622329043 2.000000e-03 54.7
14 TraesCS6B01G299600 chr3A 88.710 62 5 2 3446 3505 688919299 688919238 1.880000e-09 75.0
15 TraesCS6B01G299600 chr3A 80.488 82 14 2 3412 3492 46996287 46996207 1.470000e-05 62.1
16 TraesCS6B01G299600 chr2B 100.000 31 0 0 3460 3490 122269249 122269219 1.900000e-04 58.4
17 TraesCS6B01G299600 chr2B 100.000 29 0 0 3302 3330 394989750 394989778 2.000000e-03 54.7
18 TraesCS6B01G299600 chr3B 96.875 32 1 0 3299 3330 7268169 7268200 2.000000e-03 54.7
19 TraesCS6B01G299600 chr1A 100.000 29 0 0 3302 3330 477034251 477034223 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G299600 chr6B 537462203 537467083 4880 True 9014.000000 9014 100.000000 1 4881 1 chr6B.!!$R1 4880
1 TraesCS6B01G299600 chr6D 356283009 356287271 4262 True 2017.333333 4824 91.874667 1 4483 3 chr6D.!!$R1 4482
2 TraesCS6B01G299600 chr6A 498949982 498955065 5083 True 1428.000000 2955 92.139750 98 4881 4 chr6A.!!$R1 4783

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
885 919 0.614979 CAAGACGGGAGGGAAGAGGA 60.615 60.0 0.00 0.0 0.00 3.71 F
1532 1567 0.319555 CAGCCCGAGTTCGAGTTTCA 60.320 55.0 2.59 0.0 43.02 2.69 F
1954 1990 0.738389 ACCCGCAACAACAGTTCTTG 59.262 50.0 0.00 0.0 0.00 3.02 F
3383 3714 0.029700 AAGTTGCGGTGCGGTTTTAC 59.970 50.0 0.00 0.0 0.00 2.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2529 2853 1.349067 AGACAGACTACACCCAACCC 58.651 55.0 0.0 0.0 0.0 4.11 R
3364 3695 0.029700 GTAAAACCGCACCGCAACTT 59.970 50.0 0.0 0.0 0.0 2.66 R
3408 3739 0.102481 ACGTGAGCTGTCTGAAACGT 59.898 50.0 0.0 0.0 0.0 3.99 R
4581 4974 0.032678 CACCACGAGCACAGAGAGTT 59.967 55.0 0.0 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
195 200 2.183046 GCGGCGCTCTTTCTCTCT 59.817 61.111 26.86 0.00 0.00 3.10
366 391 2.045143 GGAGGAGGACGACGAGGT 60.045 66.667 0.00 0.00 0.00 3.85
397 422 1.272807 CTAGGGTTTCCTCCGACCAA 58.727 55.000 0.00 0.00 43.66 3.67
403 428 1.183030 TTTCCTCCGACCAAGCGAGA 61.183 55.000 0.00 0.00 0.00 4.04
478 503 3.718210 CTTCTACGCCGCCTGGGTC 62.718 68.421 0.00 0.00 41.04 4.46
487 512 2.070039 CGCCTGGGTCTGGGGATTA 61.070 63.158 0.00 0.00 37.54 1.75
504 529 2.825861 TTAGTTTTCCTTCGAGCGGT 57.174 45.000 0.00 0.00 0.00 5.68
520 545 2.980233 GTTGCGGTGCTGGCTTCT 60.980 61.111 0.00 0.00 0.00 2.85
549 575 2.150014 AACGGAGGTGGATTTGGGGG 62.150 60.000 0.00 0.00 0.00 5.40
584 610 1.202222 CGCGTAGGTAGATTTGGTCGT 60.202 52.381 0.00 0.00 0.00 4.34
610 638 1.226128 GTCGAATTTCTGCAGCGGC 60.226 57.895 9.47 3.91 41.68 6.53
611 639 2.276868 CGAATTTCTGCAGCGGCG 60.277 61.111 9.47 0.51 45.35 6.46
623 651 3.487202 GCGGCGCTGTTCGATTCA 61.487 61.111 26.86 0.00 41.67 2.57
713 745 6.187682 TGTGGATTTCTCCTTTATTCCCTTC 58.812 40.000 0.00 0.00 42.59 3.46
802 836 2.030958 GGGTGCCTACGTGTTTCGG 61.031 63.158 0.00 0.00 44.69 4.30
831 865 6.765989 AGATGTTTCCGAATATTTTGGATCGA 59.234 34.615 10.24 0.00 42.75 3.59
885 919 0.614979 CAAGACGGGAGGGAAGAGGA 60.615 60.000 0.00 0.00 0.00 3.71
954 988 4.389576 GTTGGTGCGAGCAAGGCG 62.390 66.667 0.00 0.00 36.14 5.52
970 1004 1.514087 GCGGAATCTACGGTGACCA 59.486 57.895 1.11 0.00 0.00 4.02
1299 1334 2.044793 TCAAGACATCTTCCCAGGGT 57.955 50.000 5.01 0.00 33.11 4.34
1402 1437 3.006967 GCAGGAGTCTGAGTTTAGGTTCA 59.993 47.826 0.00 0.00 43.49 3.18
1438 1473 2.035321 GGTGTGGTTAACAATGGTGTGG 59.965 50.000 8.10 0.00 41.57 4.17
1454 1489 1.203300 TGTGGAGGAGACCTTGGATGA 60.203 52.381 0.00 0.00 31.76 2.92
1532 1567 0.319555 CAGCCCGAGTTCGAGTTTCA 60.320 55.000 2.59 0.00 43.02 2.69
1550 1585 3.708403 TCAGCATGAAAGTCCAGATGT 57.292 42.857 0.00 0.00 45.97 3.06
1560 1595 4.897509 AAGTCCAGATGTGTTGATGAGA 57.102 40.909 0.00 0.00 0.00 3.27
1584 1619 2.622942 TGTCAATGTTGGAAGGCTTGTC 59.377 45.455 3.46 0.00 0.00 3.18
1585 1620 2.622942 GTCAATGTTGGAAGGCTTGTCA 59.377 45.455 3.46 0.00 0.00 3.58
1586 1621 3.068024 GTCAATGTTGGAAGGCTTGTCAA 59.932 43.478 3.46 6.50 0.00 3.18
1587 1622 3.896888 TCAATGTTGGAAGGCTTGTCAAT 59.103 39.130 3.46 0.00 0.00 2.57
1588 1623 3.947910 ATGTTGGAAGGCTTGTCAATG 57.052 42.857 3.46 0.00 0.00 2.82
1589 1624 2.665165 TGTTGGAAGGCTTGTCAATGT 58.335 42.857 3.46 0.00 0.00 2.71
1590 1625 3.030291 TGTTGGAAGGCTTGTCAATGTT 58.970 40.909 3.46 0.00 0.00 2.71
1591 1626 3.181477 TGTTGGAAGGCTTGTCAATGTTG 60.181 43.478 3.46 0.00 0.00 3.33
1592 1627 1.340889 TGGAAGGCTTGTCAATGTTGC 59.659 47.619 3.46 0.00 0.00 4.17
1593 1628 1.340889 GGAAGGCTTGTCAATGTTGCA 59.659 47.619 3.46 0.00 0.00 4.08
1594 1629 2.224018 GGAAGGCTTGTCAATGTTGCAA 60.224 45.455 3.46 0.00 0.00 4.08
1595 1630 2.806608 AGGCTTGTCAATGTTGCAAG 57.193 45.000 17.65 17.65 41.19 4.01
1596 1631 1.342174 AGGCTTGTCAATGTTGCAAGG 59.658 47.619 20.65 0.00 39.95 3.61
1597 1632 1.142474 GCTTGTCAATGTTGCAAGGC 58.858 50.000 20.65 13.96 39.95 4.35
1598 1633 1.269936 GCTTGTCAATGTTGCAAGGCT 60.270 47.619 20.65 0.00 39.95 4.58
1599 1634 2.804212 GCTTGTCAATGTTGCAAGGCTT 60.804 45.455 20.65 0.00 39.95 4.35
1600 1635 2.512485 TGTCAATGTTGCAAGGCTTG 57.488 45.000 22.75 22.75 0.00 4.01
1601 1636 1.755959 TGTCAATGTTGCAAGGCTTGT 59.244 42.857 26.71 5.28 0.00 3.16
1644 1679 2.533266 GGCGAAAATGATGCCTTCTTG 58.467 47.619 0.00 0.00 45.40 3.02
1790 1825 1.278238 GCATTCGAAGGTACCACTCG 58.722 55.000 23.52 23.52 0.00 4.18
1802 1837 4.407945 AGGTACCACTCGGTTTATGCTAAT 59.592 41.667 15.94 0.00 46.31 1.73
1815 1850 3.655276 ATGCTAATGCTATGCTTTGCC 57.345 42.857 3.74 0.00 40.48 4.52
1942 1978 1.677052 GTTGTTCCTGTTTACCCGCAA 59.323 47.619 0.00 0.00 0.00 4.85
1948 1984 1.001815 CCTGTTTACCCGCAACAACAG 60.002 52.381 4.27 4.27 43.85 3.16
1954 1990 0.738389 ACCCGCAACAACAGTTCTTG 59.262 50.000 0.00 0.00 0.00 3.02
1976 2012 7.936847 TCTTGAGCTAAAACTGGAATCTAAACA 59.063 33.333 0.00 0.00 0.00 2.83
2000 2043 9.314321 ACACTTATTTAGATATCGTTGGTTGAG 57.686 33.333 0.00 0.00 0.00 3.02
2012 2055 5.680619 TCGTTGGTTGAGGATAGCAATTAT 58.319 37.500 0.00 0.00 35.69 1.28
2026 2069 9.277565 GGATAGCAATTATTTTGTGTATATGCG 57.722 33.333 0.00 0.00 36.45 4.73
2129 2180 6.930731 TGGAAATAGTGAAACAAATTAGCCC 58.069 36.000 0.00 0.00 41.43 5.19
2130 2181 6.071051 TGGAAATAGTGAAACAAATTAGCCCC 60.071 38.462 0.00 0.00 41.43 5.80
2131 2182 5.932619 AATAGTGAAACAAATTAGCCCCC 57.067 39.130 0.00 0.00 41.43 5.40
2163 2215 8.461033 AGGAACTCCATAGGATAGAATACTCTT 58.539 37.037 0.00 0.00 38.89 2.85
2196 2248 9.019656 GTTCTCTATATATTCCAGAAGCTCAGA 57.980 37.037 0.00 0.00 0.00 3.27
2220 2272 1.473258 TGTTTCCTGTGCAACTTGCT 58.527 45.000 14.78 0.00 45.31 3.91
2377 2689 2.486548 GGCACTGACTTGGTTCCTAACA 60.487 50.000 0.00 0.00 0.00 2.41
2382 2694 6.821665 GCACTGACTTGGTTCCTAACATAATA 59.178 38.462 0.00 0.00 0.00 0.98
2425 2739 7.012894 GGCTATATGCAGGTTTATTGTGTGTTA 59.987 37.037 0.00 0.00 45.15 2.41
2444 2758 2.486472 ATCTTCCTGTGGCTGAACTG 57.514 50.000 0.00 0.00 0.00 3.16
2446 2760 1.490490 TCTTCCTGTGGCTGAACTGTT 59.510 47.619 0.00 0.00 0.00 3.16
2464 2778 7.933577 TGAACTGTTATCATCTCAGTGTTTCTT 59.066 33.333 0.00 0.00 41.37 2.52
2513 2829 5.049818 GCCTTATAGTCAATGTGCATCTGTC 60.050 44.000 0.00 0.00 0.00 3.51
2524 2848 6.615264 ATGTGCATCTGTCTCATATGTTTC 57.385 37.500 1.90 0.00 0.00 2.78
2529 2853 7.484007 GTGCATCTGTCTCATATGTTTCTTTTG 59.516 37.037 1.90 0.00 0.00 2.44
2536 2860 5.480073 TCTCATATGTTTCTTTTGGGTTGGG 59.520 40.000 1.90 0.00 0.00 4.12
2545 2870 2.649531 TTTGGGTTGGGTGTAGTCTG 57.350 50.000 0.00 0.00 0.00 3.51
2550 2875 2.289506 GGGTTGGGTGTAGTCTGTCTTC 60.290 54.545 0.00 0.00 0.00 2.87
2563 2888 9.031537 TGTAGTCTGTCTTCTATTATTGAACCA 57.968 33.333 0.00 0.00 0.00 3.67
2566 2891 8.543774 AGTCTGTCTTCTATTATTGAACCATGT 58.456 33.333 0.00 0.00 0.00 3.21
2614 2940 7.059788 TGGCCATGAGCTAAAGTCATTTATTA 58.940 34.615 0.00 0.00 43.05 0.98
2708 3038 7.308589 GCATAGTTTGTCTAATCACTTGGTTGT 60.309 37.037 0.00 0.00 31.94 3.32
2724 3054 7.066163 CACTTGGTTGTATTCTGCTATTGATGA 59.934 37.037 0.00 0.00 0.00 2.92
2728 3058 7.994911 TGGTTGTATTCTGCTATTGATGAGATT 59.005 33.333 0.00 0.00 0.00 2.40
2864 3195 5.346522 TCTTCTCGATGTGTTGATGATGAG 58.653 41.667 0.00 0.00 0.00 2.90
2954 3285 2.632512 GACCTGGCAAAAGGAATGGAAA 59.367 45.455 6.35 0.00 40.02 3.13
3047 3378 3.036429 AAGTGCGGATCCTGGAGCC 62.036 63.158 21.05 21.05 34.38 4.70
3143 3474 7.009179 AGTTGAATCAGAGATGGAAAGTGTA 57.991 36.000 0.00 0.00 0.00 2.90
3308 3639 9.719433 TGTACATATTTTTACCTAGTACTCCCT 57.281 33.333 0.00 0.00 33.45 4.20
3310 3641 8.260099 ACATATTTTTACCTAGTACTCCCTCC 57.740 38.462 0.00 0.00 0.00 4.30
3311 3642 5.866159 ATTTTTACCTAGTACTCCCTCCG 57.134 43.478 0.00 0.00 0.00 4.63
3312 3643 4.322057 TTTTACCTAGTACTCCCTCCGT 57.678 45.455 0.00 0.00 0.00 4.69
3313 3644 4.322057 TTTACCTAGTACTCCCTCCGTT 57.678 45.455 0.00 0.00 0.00 4.44
3314 3645 2.433662 ACCTAGTACTCCCTCCGTTC 57.566 55.000 0.00 0.00 0.00 3.95
3315 3646 1.637553 ACCTAGTACTCCCTCCGTTCA 59.362 52.381 0.00 0.00 0.00 3.18
3316 3647 2.022934 CCTAGTACTCCCTCCGTTCAC 58.977 57.143 0.00 0.00 0.00 3.18
3318 3649 2.305858 AGTACTCCCTCCGTTCACTT 57.694 50.000 0.00 0.00 0.00 3.16
3319 3650 2.169330 AGTACTCCCTCCGTTCACTTC 58.831 52.381 0.00 0.00 0.00 3.01
3320 3651 2.169330 GTACTCCCTCCGTTCACTTCT 58.831 52.381 0.00 0.00 0.00 2.85
3322 3653 3.103080 ACTCCCTCCGTTCACTTCTAT 57.897 47.619 0.00 0.00 0.00 1.98
3323 3654 4.246712 ACTCCCTCCGTTCACTTCTATA 57.753 45.455 0.00 0.00 0.00 1.31
3324 3655 4.607239 ACTCCCTCCGTTCACTTCTATAA 58.393 43.478 0.00 0.00 0.00 0.98
3325 3656 4.645588 ACTCCCTCCGTTCACTTCTATAAG 59.354 45.833 0.00 0.00 38.77 1.73
3326 3657 4.863548 TCCCTCCGTTCACTTCTATAAGA 58.136 43.478 0.00 0.00 36.50 2.10
3327 3658 4.643784 TCCCTCCGTTCACTTCTATAAGAC 59.356 45.833 0.00 0.00 36.50 3.01
3328 3659 4.497674 CCCTCCGTTCACTTCTATAAGACG 60.498 50.000 0.00 0.00 36.50 4.18
3330 3661 5.392811 CCTCCGTTCACTTCTATAAGACGTT 60.393 44.000 0.00 0.00 36.50 3.99
3332 3663 6.088824 TCCGTTCACTTCTATAAGACGTTTC 58.911 40.000 0.00 0.00 36.50 2.78
3333 3664 5.860182 CCGTTCACTTCTATAAGACGTTTCA 59.140 40.000 0.00 0.00 36.50 2.69
3334 3665 6.033619 CCGTTCACTTCTATAAGACGTTTCAG 59.966 42.308 0.00 0.00 36.50 3.02
3335 3666 6.033619 CGTTCACTTCTATAAGACGTTTCAGG 59.966 42.308 0.00 0.00 36.50 3.86
3337 3668 4.265556 CACTTCTATAAGACGTTTCAGGCG 59.734 45.833 0.00 0.00 36.50 5.52
3338 3669 4.157289 ACTTCTATAAGACGTTTCAGGCGA 59.843 41.667 0.00 0.00 36.50 5.54
3339 3670 4.288670 TCTATAAGACGTTTCAGGCGAG 57.711 45.455 0.00 0.00 0.00 5.03
3340 3671 3.943381 TCTATAAGACGTTTCAGGCGAGA 59.057 43.478 0.00 0.00 0.00 4.04
3341 3672 2.342910 TAAGACGTTTCAGGCGAGAC 57.657 50.000 0.00 0.00 0.00 3.36
3376 3707 5.755330 ATTTTAATAAAAGTTGCGGTGCG 57.245 34.783 4.43 0.00 33.22 5.34
3377 3708 2.904011 TAATAAAAGTTGCGGTGCGG 57.096 45.000 0.00 0.00 0.00 5.69
3378 3709 0.955905 AATAAAAGTTGCGGTGCGGT 59.044 45.000 0.00 0.00 0.00 5.68
3379 3710 0.955905 ATAAAAGTTGCGGTGCGGTT 59.044 45.000 0.00 0.00 0.00 4.44
3380 3711 0.739561 TAAAAGTTGCGGTGCGGTTT 59.260 45.000 0.00 0.00 0.00 3.27
3381 3712 0.108567 AAAAGTTGCGGTGCGGTTTT 60.109 45.000 0.00 0.00 0.00 2.43
3382 3713 0.739561 AAAGTTGCGGTGCGGTTTTA 59.260 45.000 0.00 0.00 0.00 1.52
3383 3714 0.029700 AAGTTGCGGTGCGGTTTTAC 59.970 50.000 0.00 0.00 0.00 2.01
3384 3715 1.370778 GTTGCGGTGCGGTTTTACC 60.371 57.895 0.00 0.00 34.05 2.85
3385 3716 2.553727 TTGCGGTGCGGTTTTACCC 61.554 57.895 0.00 0.00 33.75 3.69
3386 3717 3.740397 GCGGTGCGGTTTTACCCC 61.740 66.667 0.00 0.00 33.75 4.95
3387 3718 2.281622 CGGTGCGGTTTTACCCCA 60.282 61.111 0.00 0.00 33.75 4.96
3388 3719 2.619165 CGGTGCGGTTTTACCCCAC 61.619 63.158 5.31 5.31 44.29 4.61
3389 3720 1.228337 GGTGCGGTTTTACCCCACT 60.228 57.895 12.03 0.00 44.40 4.00
3390 3721 1.520600 GGTGCGGTTTTACCCCACTG 61.521 60.000 12.03 0.00 44.40 3.66
3391 3722 0.820482 GTGCGGTTTTACCCCACTGT 60.820 55.000 6.43 0.00 42.32 3.55
3392 3723 0.106619 TGCGGTTTTACCCCACTGTT 60.107 50.000 0.00 0.00 33.75 3.16
3393 3724 1.034356 GCGGTTTTACCCCACTGTTT 58.966 50.000 0.00 0.00 33.75 2.83
3394 3725 2.228925 GCGGTTTTACCCCACTGTTTA 58.771 47.619 0.00 0.00 33.75 2.01
3395 3726 2.821378 GCGGTTTTACCCCACTGTTTAT 59.179 45.455 0.00 0.00 33.75 1.40
3396 3727 4.009002 GCGGTTTTACCCCACTGTTTATA 58.991 43.478 0.00 0.00 33.75 0.98
3397 3728 4.095334 GCGGTTTTACCCCACTGTTTATAG 59.905 45.833 0.00 0.00 33.75 1.31
3398 3729 5.247862 CGGTTTTACCCCACTGTTTATAGT 58.752 41.667 0.00 0.00 33.75 2.12
3399 3730 6.405538 CGGTTTTACCCCACTGTTTATAGTA 58.594 40.000 0.00 0.00 33.75 1.82
3400 3731 6.878389 CGGTTTTACCCCACTGTTTATAGTAA 59.122 38.462 0.00 0.00 33.75 2.24
3401 3732 7.390162 CGGTTTTACCCCACTGTTTATAGTAAA 59.610 37.037 0.00 0.00 33.75 2.01
3402 3733 9.076781 GGTTTTACCCCACTGTTTATAGTAAAA 57.923 33.333 0.00 0.00 36.43 1.52
3423 3754 4.537936 AAAAAGACGTTTCAGACAGCTC 57.462 40.909 0.00 0.00 0.00 4.09
3424 3755 2.890808 AAGACGTTTCAGACAGCTCA 57.109 45.000 0.00 0.00 0.00 4.26
3425 3756 2.141535 AGACGTTTCAGACAGCTCAC 57.858 50.000 0.00 0.00 0.00 3.51
3426 3757 0.778815 GACGTTTCAGACAGCTCACG 59.221 55.000 0.00 0.00 0.00 4.35
3427 3758 0.102481 ACGTTTCAGACAGCTCACGT 59.898 50.000 0.00 0.00 0.00 4.49
3428 3759 1.209128 CGTTTCAGACAGCTCACGTT 58.791 50.000 0.00 0.00 0.00 3.99
3429 3760 1.071239 CGTTTCAGACAGCTCACGTTG 60.071 52.381 0.00 0.00 0.00 4.10
3430 3761 2.201732 GTTTCAGACAGCTCACGTTGA 58.798 47.619 0.00 0.00 0.00 3.18
3431 3762 2.595124 TTCAGACAGCTCACGTTGAA 57.405 45.000 0.00 0.00 0.00 2.69
3432 3763 1.852942 TCAGACAGCTCACGTTGAAC 58.147 50.000 0.00 0.00 0.00 3.18
3433 3764 1.409064 TCAGACAGCTCACGTTGAACT 59.591 47.619 0.00 0.00 0.00 3.01
3434 3765 1.524355 CAGACAGCTCACGTTGAACTG 59.476 52.381 13.37 13.37 43.98 3.16
3435 3766 3.760693 ACAGCTCACGTTGAACTGT 57.239 47.368 14.31 14.31 45.75 3.55
3437 3768 2.652662 CAGCTCACGTTGAACTGTTC 57.347 50.000 13.49 13.49 36.22 3.18
3438 3769 2.205074 CAGCTCACGTTGAACTGTTCT 58.795 47.619 20.18 0.00 36.22 3.01
3439 3770 3.381045 CAGCTCACGTTGAACTGTTCTA 58.619 45.455 20.18 11.05 36.22 2.10
3440 3771 3.426859 CAGCTCACGTTGAACTGTTCTAG 59.573 47.826 20.18 13.51 36.22 2.43
3441 3772 2.731976 GCTCACGTTGAACTGTTCTAGG 59.268 50.000 20.18 19.16 0.00 3.02
3442 3773 3.799232 GCTCACGTTGAACTGTTCTAGGT 60.799 47.826 20.18 19.73 34.73 3.08
3443 3774 3.713288 TCACGTTGAACTGTTCTAGGTG 58.287 45.455 32.24 32.24 45.68 4.00
3444 3775 3.713288 CACGTTGAACTGTTCTAGGTGA 58.287 45.455 33.43 10.75 46.52 4.02
3445 3776 4.038763 TCACGTTGAACTGTTCTAGGTGAT 59.961 41.667 34.38 14.41 46.81 3.06
3446 3777 4.150627 CACGTTGAACTGTTCTAGGTGATG 59.849 45.833 33.43 18.58 46.52 3.07
3447 3778 4.202223 ACGTTGAACTGTTCTAGGTGATGT 60.202 41.667 22.61 10.87 33.56 3.06
3448 3779 4.386049 CGTTGAACTGTTCTAGGTGATGTC 59.614 45.833 20.18 0.00 0.00 3.06
3449 3780 5.542779 GTTGAACTGTTCTAGGTGATGTCT 58.457 41.667 20.18 0.00 0.00 3.41
3450 3781 5.139435 TGAACTGTTCTAGGTGATGTCTG 57.861 43.478 20.18 0.00 0.00 3.51
3451 3782 4.832823 TGAACTGTTCTAGGTGATGTCTGA 59.167 41.667 20.18 0.00 0.00 3.27
3452 3783 5.304357 TGAACTGTTCTAGGTGATGTCTGAA 59.696 40.000 20.18 0.00 0.00 3.02
3453 3784 6.014242 TGAACTGTTCTAGGTGATGTCTGAAT 60.014 38.462 20.18 0.00 0.00 2.57
3454 3785 6.365970 ACTGTTCTAGGTGATGTCTGAATT 57.634 37.500 0.00 0.00 0.00 2.17
3455 3786 6.169094 ACTGTTCTAGGTGATGTCTGAATTG 58.831 40.000 0.00 0.00 0.00 2.32
3456 3787 6.114187 TGTTCTAGGTGATGTCTGAATTGT 57.886 37.500 0.00 0.00 0.00 2.71
3457 3788 6.166279 TGTTCTAGGTGATGTCTGAATTGTC 58.834 40.000 0.00 0.00 0.00 3.18
3458 3789 6.014242 TGTTCTAGGTGATGTCTGAATTGTCT 60.014 38.462 0.00 0.00 0.00 3.41
3459 3790 7.178451 TGTTCTAGGTGATGTCTGAATTGTCTA 59.822 37.037 0.00 0.00 0.00 2.59
3460 3791 7.101652 TCTAGGTGATGTCTGAATTGTCTAC 57.898 40.000 0.00 0.00 0.00 2.59
3461 3792 5.745312 AGGTGATGTCTGAATTGTCTACA 57.255 39.130 0.00 0.00 0.00 2.74
3462 3793 6.114187 AGGTGATGTCTGAATTGTCTACAA 57.886 37.500 0.00 0.00 40.51 2.41
3463 3794 5.934625 AGGTGATGTCTGAATTGTCTACAAC 59.065 40.000 0.00 0.00 38.86 3.32
3464 3795 5.163953 GGTGATGTCTGAATTGTCTACAACG 60.164 44.000 0.00 0.00 38.86 4.10
3465 3796 5.405571 GTGATGTCTGAATTGTCTACAACGT 59.594 40.000 0.00 0.00 38.86 3.99
3466 3797 5.633601 TGATGTCTGAATTGTCTACAACGTC 59.366 40.000 0.00 0.18 38.86 4.34
3467 3798 5.196341 TGTCTGAATTGTCTACAACGTCT 57.804 39.130 0.00 0.00 38.86 4.18
3468 3799 5.597806 TGTCTGAATTGTCTACAACGTCTT 58.402 37.500 0.00 0.00 38.86 3.01
3469 3800 6.741109 TGTCTGAATTGTCTACAACGTCTTA 58.259 36.000 0.00 0.00 38.86 2.10
3470 3801 7.375834 TGTCTGAATTGTCTACAACGTCTTAT 58.624 34.615 0.00 0.00 38.86 1.73
3471 3802 8.517056 TGTCTGAATTGTCTACAACGTCTTATA 58.483 33.333 0.00 0.00 38.86 0.98
3472 3803 9.350357 GTCTGAATTGTCTACAACGTCTTATAA 57.650 33.333 0.00 0.00 38.86 0.98
3473 3804 9.917129 TCTGAATTGTCTACAACGTCTTATAAA 57.083 29.630 0.00 0.00 38.86 1.40
3485 3816 8.985805 ACAACGTCTTATAAAAGTAAACAGAGG 58.014 33.333 0.00 0.00 34.13 3.69
3486 3817 8.440833 CAACGTCTTATAAAAGTAAACAGAGGG 58.559 37.037 0.00 0.00 34.13 4.30
3487 3818 7.899973 ACGTCTTATAAAAGTAAACAGAGGGA 58.100 34.615 0.00 0.00 34.13 4.20
3488 3819 8.033626 ACGTCTTATAAAAGTAAACAGAGGGAG 58.966 37.037 0.00 0.00 34.13 4.30
3489 3820 8.033626 CGTCTTATAAAAGTAAACAGAGGGAGT 58.966 37.037 0.00 0.00 34.13 3.85
3504 3835 6.440965 ACAGAGGGAGTAGTATTTGTTAGCTT 59.559 38.462 0.00 0.00 0.00 3.74
3505 3836 6.981559 CAGAGGGAGTAGTATTTGTTAGCTTC 59.018 42.308 0.00 0.00 0.00 3.86
3535 3866 6.908825 TGGTGTCAACTGTTAATCTTATTGC 58.091 36.000 0.00 0.00 0.00 3.56
3536 3867 6.488344 TGGTGTCAACTGTTAATCTTATTGCA 59.512 34.615 0.00 0.00 0.00 4.08
3537 3868 6.801862 GGTGTCAACTGTTAATCTTATTGCAC 59.198 38.462 0.00 0.00 0.00 4.57
3538 3869 7.359595 GTGTCAACTGTTAATCTTATTGCACA 58.640 34.615 0.00 0.00 30.97 4.57
3539 3870 8.023128 GTGTCAACTGTTAATCTTATTGCACAT 58.977 33.333 0.00 0.00 30.97 3.21
3547 3927 8.955388 TGTTAATCTTATTGCACATAAGCAGAA 58.045 29.630 17.07 10.90 46.54 3.02
3557 3937 7.225784 TGCACATAAGCAGAATTTTTCCTTA 57.774 32.000 0.00 0.00 40.11 2.69
3583 3963 6.000840 TGAATTAACCAGACATGCAGTGTTA 58.999 36.000 0.00 0.00 42.36 2.41
3584 3964 6.658816 TGAATTAACCAGACATGCAGTGTTAT 59.341 34.615 0.00 0.00 42.36 1.89
3585 3965 5.878332 TTAACCAGACATGCAGTGTTATG 57.122 39.130 0.00 7.65 42.36 1.90
3606 3986 4.264253 TGTAGTTGCCTTGATCCTTGATG 58.736 43.478 0.00 0.00 0.00 3.07
3617 3997 6.882678 CCTTGATCCTTGATGTATGCATATCA 59.117 38.462 10.16 8.86 35.07 2.15
3659 4039 7.231115 TGTGAGAAACATTCATTGGAAGATTCA 59.769 33.333 0.00 0.00 36.25 2.57
3674 4056 7.507829 TGGAAGATTCAAAATGAAATGTGGTT 58.492 30.769 0.00 0.00 40.12 3.67
3676 4058 8.839343 GGAAGATTCAAAATGAAATGTGGTTTT 58.161 29.630 0.00 0.00 40.12 2.43
3704 4087 9.232473 GACTTGTCCTAAATGTTTTCCTCTTAT 57.768 33.333 0.00 0.00 0.00 1.73
3705 4088 9.014297 ACTTGTCCTAAATGTTTTCCTCTTATG 57.986 33.333 0.00 0.00 0.00 1.90
3826 4209 2.193248 GCCTGGTCCTACATGCCC 59.807 66.667 0.00 0.00 0.00 5.36
3829 4212 3.006133 TGGTCCTACATGCCCGCA 61.006 61.111 0.00 0.00 0.00 5.69
3922 4305 0.824109 TCCATGCAGAGGTCCTAACG 59.176 55.000 7.75 0.00 0.00 3.18
4070 4459 2.202932 CGTCCAGGATTGGCTCGG 60.203 66.667 0.00 0.00 44.63 4.63
4236 4625 2.634982 GCAAGATTTCATTGCCGTGA 57.365 45.000 0.00 0.00 45.79 4.35
4237 4626 2.945278 GCAAGATTTCATTGCCGTGAA 58.055 42.857 0.00 0.00 45.79 3.18
4292 4683 6.730960 TTTACGTTTCTGTGTTTCTCAGTT 57.269 33.333 0.00 0.00 34.86 3.16
4322 4713 1.786937 TCCATTTTGTTGGTGGCACT 58.213 45.000 18.45 0.00 38.01 4.40
4323 4714 2.950781 TCCATTTTGTTGGTGGCACTA 58.049 42.857 18.45 8.99 38.01 2.74
4324 4715 2.625790 TCCATTTTGTTGGTGGCACTAC 59.374 45.455 18.45 15.75 38.01 2.73
4325 4716 2.288763 CCATTTTGTTGGTGGCACTACC 60.289 50.000 18.45 4.27 41.24 3.18
4326 4717 1.025812 TTTTGTTGGTGGCACTACCG 58.974 50.000 18.45 0.00 43.87 4.02
4333 4724 3.046280 GTGGCACTACCGCTCTTAC 57.954 57.895 11.13 0.00 46.20 2.34
4334 4725 0.245539 GTGGCACTACCGCTCTTACA 59.754 55.000 11.13 0.00 46.20 2.41
4335 4726 0.530744 TGGCACTACCGCTCTTACAG 59.469 55.000 0.00 0.00 43.94 2.74
4336 4727 0.806492 GGCACTACCGCTCTTACAGC 60.806 60.000 0.00 0.00 45.85 4.40
4347 4738 4.718940 GCTCTTACAGCTCTCTCTTCTT 57.281 45.455 0.00 0.00 45.83 2.52
4348 4739 5.072040 GCTCTTACAGCTCTCTCTTCTTT 57.928 43.478 0.00 0.00 45.83 2.52
4349 4740 5.478407 GCTCTTACAGCTCTCTCTTCTTTT 58.522 41.667 0.00 0.00 45.83 2.27
4350 4741 5.931724 GCTCTTACAGCTCTCTCTTCTTTTT 59.068 40.000 0.00 0.00 45.83 1.94
4368 4759 3.644966 TTTTATGGGTAGTCTGGCCAG 57.355 47.619 27.87 27.87 0.00 4.85
4369 4760 0.837272 TTATGGGTAGTCTGGCCAGC 59.163 55.000 28.91 21.95 0.00 4.85
4370 4761 0.326143 TATGGGTAGTCTGGCCAGCA 60.326 55.000 28.91 18.81 0.00 4.41
4371 4762 1.207488 ATGGGTAGTCTGGCCAGCAA 61.207 55.000 28.91 9.28 0.00 3.91
4372 4763 1.378762 GGGTAGTCTGGCCAGCAAA 59.621 57.895 28.91 12.19 0.00 3.68
4373 4764 0.678048 GGGTAGTCTGGCCAGCAAAG 60.678 60.000 28.91 5.03 0.00 2.77
4374 4765 0.324943 GGTAGTCTGGCCAGCAAAGA 59.675 55.000 28.91 7.84 0.00 2.52
4375 4766 1.677217 GGTAGTCTGGCCAGCAAAGAG 60.677 57.143 28.91 3.31 0.00 2.85
4376 4767 1.276421 GTAGTCTGGCCAGCAAAGAGA 59.724 52.381 28.91 6.14 0.00 3.10
4377 4768 0.324285 AGTCTGGCCAGCAAAGAGAG 59.676 55.000 28.91 1.59 0.00 3.20
4378 4769 0.322975 GTCTGGCCAGCAAAGAGAGA 59.677 55.000 28.91 4.45 0.00 3.10
4379 4770 0.612229 TCTGGCCAGCAAAGAGAGAG 59.388 55.000 28.91 0.13 0.00 3.20
4380 4771 0.612229 CTGGCCAGCAAAGAGAGAGA 59.388 55.000 22.33 0.00 0.00 3.10
4381 4772 0.612229 TGGCCAGCAAAGAGAGAGAG 59.388 55.000 0.00 0.00 0.00 3.20
4382 4773 0.107752 GGCCAGCAAAGAGAGAGAGG 60.108 60.000 0.00 0.00 0.00 3.69
4392 4783 0.110486 GAGAGAGAGGAGAGGGCGAT 59.890 60.000 0.00 0.00 0.00 4.58
4421 4814 0.618981 ACTGTGCCCTTTACCTAGCC 59.381 55.000 0.00 0.00 0.00 3.93
4444 4837 0.108945 GGTACTCCACCCGAAAGACG 60.109 60.000 0.00 0.00 42.07 4.18
4450 4843 1.018910 CCACCCGAAAGACGTTGTTT 58.981 50.000 0.00 0.00 40.78 2.83
4452 4845 2.540157 CCACCCGAAAGACGTTGTTTTC 60.540 50.000 9.68 9.68 40.78 2.29
4453 4846 2.353579 CACCCGAAAGACGTTGTTTTCT 59.646 45.455 14.83 0.00 40.78 2.52
4461 4854 6.561717 CGAAAGACGTTGTTTTCTACTCCTTC 60.562 42.308 14.83 0.00 37.22 3.46
4480 4873 4.379499 CCTTCGGCTCTTTATTCAACCAAC 60.379 45.833 0.00 0.00 0.00 3.77
4483 4876 3.127030 CGGCTCTTTATTCAACCAACCTC 59.873 47.826 0.00 0.00 0.00 3.85
4484 4877 4.336280 GGCTCTTTATTCAACCAACCTCT 58.664 43.478 0.00 0.00 0.00 3.69
4485 4878 4.767409 GGCTCTTTATTCAACCAACCTCTT 59.233 41.667 0.00 0.00 0.00 2.85
4486 4879 5.243954 GGCTCTTTATTCAACCAACCTCTTT 59.756 40.000 0.00 0.00 0.00 2.52
4487 4880 6.433093 GGCTCTTTATTCAACCAACCTCTTTA 59.567 38.462 0.00 0.00 0.00 1.85
4488 4881 7.039993 GGCTCTTTATTCAACCAACCTCTTTAA 60.040 37.037 0.00 0.00 0.00 1.52
4489 4882 8.357402 GCTCTTTATTCAACCAACCTCTTTAAA 58.643 33.333 0.00 0.00 0.00 1.52
4490 4883 9.678941 CTCTTTATTCAACCAACCTCTTTAAAC 57.321 33.333 0.00 0.00 0.00 2.01
4491 4884 9.416284 TCTTTATTCAACCAACCTCTTTAAACT 57.584 29.630 0.00 0.00 0.00 2.66
4492 4885 9.678941 CTTTATTCAACCAACCTCTTTAAACTC 57.321 33.333 0.00 0.00 0.00 3.01
4493 4886 8.754991 TTATTCAACCAACCTCTTTAAACTCA 57.245 30.769 0.00 0.00 0.00 3.41
4494 4887 6.693315 TTCAACCAACCTCTTTAAACTCAG 57.307 37.500 0.00 0.00 0.00 3.35
4495 4888 4.578928 TCAACCAACCTCTTTAAACTCAGC 59.421 41.667 0.00 0.00 0.00 4.26
4496 4889 4.164843 ACCAACCTCTTTAAACTCAGCA 57.835 40.909 0.00 0.00 0.00 4.41
4497 4890 4.137543 ACCAACCTCTTTAAACTCAGCAG 58.862 43.478 0.00 0.00 0.00 4.24
4498 4891 3.057946 CCAACCTCTTTAAACTCAGCAGC 60.058 47.826 0.00 0.00 0.00 5.25
4499 4892 2.784347 ACCTCTTTAAACTCAGCAGCC 58.216 47.619 0.00 0.00 0.00 4.85
4500 4893 1.734465 CCTCTTTAAACTCAGCAGCCG 59.266 52.381 0.00 0.00 0.00 5.52
4501 4894 2.612972 CCTCTTTAAACTCAGCAGCCGA 60.613 50.000 0.00 0.00 0.00 5.54
4502 4895 2.413453 CTCTTTAAACTCAGCAGCCGAC 59.587 50.000 0.00 0.00 0.00 4.79
4503 4896 2.143122 CTTTAAACTCAGCAGCCGACA 58.857 47.619 0.00 0.00 0.00 4.35
4504 4897 2.472695 TTAAACTCAGCAGCCGACAT 57.527 45.000 0.00 0.00 0.00 3.06
4505 4898 3.603158 TTAAACTCAGCAGCCGACATA 57.397 42.857 0.00 0.00 0.00 2.29
4506 4899 2.015736 AAACTCAGCAGCCGACATAG 57.984 50.000 0.00 0.00 0.00 2.23
4507 4900 0.460987 AACTCAGCAGCCGACATAGC 60.461 55.000 0.00 0.00 0.00 2.97
4508 4901 1.326213 ACTCAGCAGCCGACATAGCT 61.326 55.000 0.00 0.00 42.70 3.32
4509 4902 0.179089 CTCAGCAGCCGACATAGCTT 60.179 55.000 0.00 0.00 38.95 3.74
4510 4903 0.460811 TCAGCAGCCGACATAGCTTG 60.461 55.000 0.00 0.00 38.95 4.01
4511 4904 1.817099 AGCAGCCGACATAGCTTGC 60.817 57.895 0.00 0.00 38.95 4.01
4512 4905 2.828128 GCAGCCGACATAGCTTGCC 61.828 63.158 0.00 0.00 38.95 4.52
4513 4906 2.182842 CAGCCGACATAGCTTGCCC 61.183 63.158 0.00 0.00 38.95 5.36
4514 4907 2.902343 GCCGACATAGCTTGCCCC 60.902 66.667 0.00 0.00 0.00 5.80
4515 4908 2.588877 CCGACATAGCTTGCCCCG 60.589 66.667 0.00 0.00 0.00 5.73
4516 4909 3.272334 CGACATAGCTTGCCCCGC 61.272 66.667 0.00 0.00 0.00 6.13
4517 4910 3.272334 GACATAGCTTGCCCCGCG 61.272 66.667 0.00 0.00 0.00 6.46
4528 4921 4.137872 CCCCGCGCCTCGTCTTAA 62.138 66.667 0.00 0.00 36.19 1.85
4543 4936 3.695060 CGTCTTAAGCAAGAGGAGTAGGA 59.305 47.826 0.00 0.00 45.43 2.94
4544 4937 4.439016 CGTCTTAAGCAAGAGGAGTAGGAC 60.439 50.000 0.00 0.00 45.43 3.85
4546 4939 2.632763 AAGCAAGAGGAGTAGGACCT 57.367 50.000 0.00 0.00 40.80 3.85
4547 4940 1.859302 AGCAAGAGGAGTAGGACCTG 58.141 55.000 3.53 0.00 37.93 4.00
4548 4941 1.077993 AGCAAGAGGAGTAGGACCTGT 59.922 52.381 3.53 0.00 37.93 4.00
4549 4942 1.478916 GCAAGAGGAGTAGGACCTGTC 59.521 57.143 3.53 0.32 37.93 3.51
4550 4943 2.886391 GCAAGAGGAGTAGGACCTGTCT 60.886 54.545 3.53 2.27 37.93 3.41
4551 4944 2.757868 CAAGAGGAGTAGGACCTGTCTG 59.242 54.545 3.53 0.00 37.93 3.51
4552 4945 1.997040 AGAGGAGTAGGACCTGTCTGT 59.003 52.381 3.53 0.00 37.93 3.41
4553 4946 2.380590 AGAGGAGTAGGACCTGTCTGTT 59.619 50.000 3.53 0.00 37.93 3.16
4554 4947 2.494073 GAGGAGTAGGACCTGTCTGTTG 59.506 54.545 3.53 0.00 37.93 3.33
4555 4948 1.066787 GGAGTAGGACCTGTCTGTTGC 60.067 57.143 3.53 0.00 0.00 4.17
4558 4951 0.976641 TAGGACCTGTCTGTTGCCAG 59.023 55.000 3.53 0.00 40.25 4.85
4560 4953 0.685097 GGACCTGTCTGTTGCCAGTA 59.315 55.000 0.00 0.00 39.82 2.74
4562 4955 0.687354 ACCTGTCTGTTGCCAGTAGG 59.313 55.000 11.47 11.47 43.52 3.18
4563 4956 0.036010 CCTGTCTGTTGCCAGTAGGG 60.036 60.000 0.00 0.00 38.91 3.53
4579 4972 2.353573 GGCTTGGCCCGGTTTCTA 59.646 61.111 0.00 0.00 44.06 2.10
4581 4974 0.181824 GGCTTGGCCCGGTTTCTATA 59.818 55.000 0.00 0.00 44.06 1.31
4582 4975 1.409101 GGCTTGGCCCGGTTTCTATAA 60.409 52.381 0.00 0.00 44.06 0.98
4585 4978 2.994186 TGGCCCGGTTTCTATAACTC 57.006 50.000 0.00 0.00 0.00 3.01
4586 4979 2.474112 TGGCCCGGTTTCTATAACTCT 58.526 47.619 0.00 0.00 0.00 3.24
4587 4980 2.433239 TGGCCCGGTTTCTATAACTCTC 59.567 50.000 0.00 0.00 0.00 3.20
4588 4981 2.699321 GGCCCGGTTTCTATAACTCTCT 59.301 50.000 0.00 0.00 0.00 3.10
4589 4982 3.492829 GGCCCGGTTTCTATAACTCTCTG 60.493 52.174 0.00 0.00 0.00 3.35
4590 4983 3.132467 GCCCGGTTTCTATAACTCTCTGT 59.868 47.826 0.00 0.00 0.00 3.41
4591 4984 4.683832 CCCGGTTTCTATAACTCTCTGTG 58.316 47.826 0.00 0.00 0.00 3.66
4592 4985 4.113354 CCGGTTTCTATAACTCTCTGTGC 58.887 47.826 0.00 0.00 0.00 4.57
4593 4986 4.142138 CCGGTTTCTATAACTCTCTGTGCT 60.142 45.833 0.00 0.00 0.00 4.40
4594 4987 5.038033 CGGTTTCTATAACTCTCTGTGCTC 58.962 45.833 0.00 0.00 0.00 4.26
4595 4988 5.038033 GGTTTCTATAACTCTCTGTGCTCG 58.962 45.833 0.00 0.00 0.00 5.03
4596 4989 5.393243 GGTTTCTATAACTCTCTGTGCTCGT 60.393 44.000 0.00 0.00 0.00 4.18
4597 4990 4.884458 TCTATAACTCTCTGTGCTCGTG 57.116 45.455 0.00 0.00 0.00 4.35
4599 4992 1.617322 TAACTCTCTGTGCTCGTGGT 58.383 50.000 0.00 0.00 0.00 4.16
4600 4993 0.032678 AACTCTCTGTGCTCGTGGTG 59.967 55.000 0.00 0.00 0.00 4.17
4601 4994 0.823769 ACTCTCTGTGCTCGTGGTGA 60.824 55.000 0.00 0.00 0.00 4.02
4602 4995 0.529833 CTCTCTGTGCTCGTGGTGAT 59.470 55.000 0.00 0.00 0.00 3.06
4603 4996 0.244721 TCTCTGTGCTCGTGGTGATG 59.755 55.000 0.00 0.00 0.00 3.07
4606 4999 0.107993 CTGTGCTCGTGGTGATGGAT 60.108 55.000 0.00 0.00 0.00 3.41
4607 5000 0.324614 TGTGCTCGTGGTGATGGATT 59.675 50.000 0.00 0.00 0.00 3.01
4608 5001 0.729116 GTGCTCGTGGTGATGGATTG 59.271 55.000 0.00 0.00 0.00 2.67
4609 5002 1.026182 TGCTCGTGGTGATGGATTGC 61.026 55.000 0.00 0.00 0.00 3.56
4610 5003 1.026182 GCTCGTGGTGATGGATTGCA 61.026 55.000 0.00 0.00 0.00 4.08
4612 5005 1.399440 CTCGTGGTGATGGATTGCAAG 59.601 52.381 4.94 0.00 0.00 4.01
4613 5006 0.452987 CGTGGTGATGGATTGCAAGG 59.547 55.000 4.94 0.00 0.00 3.61
4614 5007 0.174162 GTGGTGATGGATTGCAAGGC 59.826 55.000 4.94 0.00 0.00 4.35
4616 5009 0.458669 GGTGATGGATTGCAAGGCTG 59.541 55.000 4.94 0.00 0.00 4.85
4618 5011 1.547372 GTGATGGATTGCAAGGCTGTT 59.453 47.619 4.94 0.00 0.00 3.16
4619 5012 1.820519 TGATGGATTGCAAGGCTGTTC 59.179 47.619 4.94 0.00 0.00 3.18
4622 5015 0.529378 GGATTGCAAGGCTGTTCTGG 59.471 55.000 4.94 0.00 0.00 3.86
4623 5016 0.529378 GATTGCAAGGCTGTTCTGGG 59.471 55.000 4.94 0.00 0.00 4.45
4626 5019 2.270986 GCAAGGCTGTTCTGGGTGG 61.271 63.158 0.00 0.00 0.00 4.61
4627 5020 1.604593 CAAGGCTGTTCTGGGTGGG 60.605 63.158 0.00 0.00 0.00 4.61
4628 5021 2.845345 AAGGCTGTTCTGGGTGGGG 61.845 63.158 0.00 0.00 0.00 4.96
4630 5023 3.971702 GCTGTTCTGGGTGGGGCT 61.972 66.667 0.00 0.00 0.00 5.19
4631 5024 2.352805 CTGTTCTGGGTGGGGCTC 59.647 66.667 0.00 0.00 0.00 4.70
4633 5026 3.256960 GTTCTGGGTGGGGCTCCA 61.257 66.667 0.00 0.00 41.58 3.86
4634 5027 2.451493 TTCTGGGTGGGGCTCCAA 60.451 61.111 7.05 0.00 46.04 3.53
4639 5032 3.728373 GGTGGGGCTCCAACCGAT 61.728 66.667 10.58 0.00 44.95 4.18
4640 5033 2.372074 GGTGGGGCTCCAACCGATA 61.372 63.158 10.58 0.00 44.95 2.92
4641 5034 1.153229 GTGGGGCTCCAACCGATAC 60.153 63.158 7.05 0.00 46.04 2.24
4644 5344 1.523938 GGGCTCCAACCGATACTGC 60.524 63.158 0.00 0.00 0.00 4.40
4656 5356 4.000988 ACCGATACTGCTTCAACGATTTT 58.999 39.130 0.00 0.00 0.00 1.82
4662 5362 8.752254 CGATACTGCTTCAACGATTTTTAGATA 58.248 33.333 0.00 0.00 0.00 1.98
4665 5365 8.492673 ACTGCTTCAACGATTTTTAGATATCA 57.507 30.769 5.32 0.00 0.00 2.15
4667 5367 9.941664 CTGCTTCAACGATTTTTAGATATCATT 57.058 29.630 5.32 0.00 0.00 2.57
4676 5376 9.604626 CGATTTTTAGATATCATTTCAAGGAGC 57.395 33.333 5.32 0.00 0.00 4.70
4678 5378 8.731275 TTTTTAGATATCATTTCAAGGAGCGA 57.269 30.769 5.32 0.00 0.00 4.93
4682 5382 2.099141 TCATTTCAAGGAGCGAGTGG 57.901 50.000 0.00 0.00 0.00 4.00
4696 5396 1.680338 GAGTGGCTGTTGTGGTCTTT 58.320 50.000 0.00 0.00 0.00 2.52
4697 5397 2.024414 GAGTGGCTGTTGTGGTCTTTT 58.976 47.619 0.00 0.00 0.00 2.27
4700 5400 4.020543 AGTGGCTGTTGTGGTCTTTTAAA 58.979 39.130 0.00 0.00 0.00 1.52
4701 5401 4.097892 AGTGGCTGTTGTGGTCTTTTAAAG 59.902 41.667 0.00 0.00 0.00 1.85
4703 5403 3.381045 GCTGTTGTGGTCTTTTAAAGCC 58.619 45.455 0.00 5.65 0.00 4.35
4705 5405 4.610945 CTGTTGTGGTCTTTTAAAGCCTG 58.389 43.478 15.33 0.00 0.00 4.85
4706 5406 3.383185 TGTTGTGGTCTTTTAAAGCCTGG 59.617 43.478 15.33 0.00 0.00 4.45
4708 5408 4.440826 TGTGGTCTTTTAAAGCCTGGTA 57.559 40.909 15.33 0.00 0.00 3.25
4709 5409 4.139038 TGTGGTCTTTTAAAGCCTGGTAC 58.861 43.478 15.33 8.51 0.00 3.34
4710 5410 3.187842 GTGGTCTTTTAAAGCCTGGTACG 59.812 47.826 15.33 0.00 0.00 3.67
4711 5411 3.071312 TGGTCTTTTAAAGCCTGGTACGA 59.929 43.478 15.33 0.00 0.00 3.43
4712 5412 4.067192 GGTCTTTTAAAGCCTGGTACGAA 58.933 43.478 0.00 0.00 0.00 3.85
4713 5413 4.153655 GGTCTTTTAAAGCCTGGTACGAAG 59.846 45.833 0.00 0.00 0.00 3.79
4715 5415 5.120363 GTCTTTTAAAGCCTGGTACGAAGAG 59.880 44.000 0.00 0.00 0.00 2.85
4716 5416 3.604875 TTAAAGCCTGGTACGAAGAGG 57.395 47.619 0.00 0.00 0.00 3.69
4717 5417 1.640917 AAAGCCTGGTACGAAGAGGA 58.359 50.000 0.00 0.00 0.00 3.71
4718 5418 1.867363 AAGCCTGGTACGAAGAGGAT 58.133 50.000 0.00 0.00 0.00 3.24
4719 5419 1.115467 AGCCTGGTACGAAGAGGATG 58.885 55.000 0.00 0.00 0.00 3.51
4720 5420 0.824759 GCCTGGTACGAAGAGGATGT 59.175 55.000 0.00 0.00 0.00 3.06
4722 5422 2.354805 GCCTGGTACGAAGAGGATGTTT 60.355 50.000 0.00 0.00 0.00 2.83
4723 5423 3.262420 CCTGGTACGAAGAGGATGTTTG 58.738 50.000 0.00 0.00 0.00 2.93
4724 5424 2.673368 CTGGTACGAAGAGGATGTTTGC 59.327 50.000 0.00 0.00 0.00 3.68
4725 5425 2.037902 TGGTACGAAGAGGATGTTTGCA 59.962 45.455 0.00 0.00 0.00 4.08
4726 5426 3.270877 GGTACGAAGAGGATGTTTGCAT 58.729 45.455 0.00 0.00 38.18 3.96
4727 5427 3.063997 GGTACGAAGAGGATGTTTGCATG 59.936 47.826 0.00 0.00 35.07 4.06
4728 5428 2.783135 ACGAAGAGGATGTTTGCATGT 58.217 42.857 0.00 0.00 35.07 3.21
4729 5429 2.485426 ACGAAGAGGATGTTTGCATGTG 59.515 45.455 0.00 0.00 35.07 3.21
4732 5432 3.928727 AGAGGATGTTTGCATGTGTTG 57.071 42.857 0.00 0.00 35.07 3.33
4763 5494 9.593134 TTTGTGCTGTTGATTTAGTGTAATTTT 57.407 25.926 0.00 0.00 0.00 1.82
4810 5541 9.213799 GCAATTAGAGGAAGAAGACTAATATGG 57.786 37.037 0.00 0.00 35.43 2.74
4872 5604 9.702726 CGTTCAATTGTTTATCCATTGTACTAG 57.297 33.333 5.13 0.00 0.00 2.57
4880 5612 9.461312 TGTTTATCCATTGTACTAGAATGCTTT 57.539 29.630 0.00 0.00 30.66 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 104 5.164954 CCTGGAAAACACGAAAGAAAACAA 58.835 37.500 0.00 0.00 0.00 2.83
133 134 1.402787 CGGGGGATGGGATTTTTCTG 58.597 55.000 0.00 0.00 0.00 3.02
156 160 6.198216 CCGCTGATTTTTGGTATTTATTTCGG 59.802 38.462 0.00 0.00 0.00 4.30
195 200 1.547755 AGAGAGACAGGGGAGGGGA 60.548 63.158 0.00 0.00 0.00 4.81
377 402 0.616679 TGGTCGGAGGAAACCCTAGG 60.617 60.000 0.06 0.06 34.47 3.02
478 503 4.192317 CTCGAAGGAAAACTAATCCCCAG 58.808 47.826 0.00 0.00 37.71 4.45
487 512 1.226746 CAACCGCTCGAAGGAAAACT 58.773 50.000 12.92 0.00 0.00 2.66
504 529 2.979676 CAGAAGCCAGCACCGCAA 60.980 61.111 0.00 0.00 0.00 4.85
610 638 2.802667 CGCCCTGAATCGAACAGCG 61.803 63.158 14.73 13.42 42.69 5.18
611 639 1.741770 ACGCCCTGAATCGAACAGC 60.742 57.895 14.73 7.12 34.47 4.40
623 651 1.067635 GCAATCAATCAAACACGCCCT 60.068 47.619 0.00 0.00 0.00 5.19
658 686 3.862845 CGCCCAAATTTAGGAAAAATCGG 59.137 43.478 6.86 0.00 0.00 4.18
713 745 0.940126 CCGCTCAAATCATCCGGAAG 59.060 55.000 9.01 3.44 41.34 3.46
802 836 5.516339 CCAAAATATTCGGAAACATCTGCAC 59.484 40.000 0.00 0.00 0.00 4.57
831 865 3.074538 AGGGCGCCAATATTAGGAGATTT 59.925 43.478 30.85 0.00 0.00 2.17
885 919 5.826737 CAGAGCAGGTTAGAATGGATCAAAT 59.173 40.000 0.00 0.00 0.00 2.32
954 988 3.754766 GGTGGTCACCGTAGATTCC 57.245 57.895 4.22 0.00 42.29 3.01
970 1004 1.915078 CTGCCGGAATCAGAAGGGGT 61.915 60.000 5.05 0.00 33.54 4.95
1160 1195 3.315142 TAGAGCGCTGGCAAGGTGG 62.315 63.158 18.48 0.00 43.41 4.61
1299 1334 2.100197 CTACCCTCACTTCCGACATCA 58.900 52.381 0.00 0.00 0.00 3.07
1402 1437 2.224378 CCACACCATCACTCTCTTGTGT 60.224 50.000 0.00 0.00 38.90 3.72
1438 1473 1.138661 CTGCTCATCCAAGGTCTCCTC 59.861 57.143 0.00 0.00 30.89 3.71
1454 1489 0.323178 CTGCACCCCTTCATTCTGCT 60.323 55.000 0.00 0.00 0.00 4.24
1532 1567 3.430042 ACACATCTGGACTTTCATGCT 57.570 42.857 0.00 0.00 0.00 3.79
1550 1585 4.356405 ACATTGACAGGTCTCATCAACA 57.644 40.909 0.65 0.00 35.28 3.33
1560 1595 1.145738 AGCCTTCCAACATTGACAGGT 59.854 47.619 9.53 0.00 32.66 4.00
1584 1619 2.512485 TGACAAGCCTTGCAACATTG 57.488 45.000 3.88 3.52 0.00 2.82
1585 1620 2.168106 TGTTGACAAGCCTTGCAACATT 59.832 40.909 27.86 3.62 44.56 2.71
1586 1621 1.755959 TGTTGACAAGCCTTGCAACAT 59.244 42.857 27.86 4.25 44.56 2.71
1587 1622 1.180907 TGTTGACAAGCCTTGCAACA 58.819 45.000 27.86 27.86 45.80 3.33
1588 1623 2.292103 TTGTTGACAAGCCTTGCAAC 57.708 45.000 24.89 24.89 42.53 4.17
1589 1624 2.483363 CCATTGTTGACAAGCCTTGCAA 60.483 45.455 3.88 7.23 39.47 4.08
1590 1625 1.068895 CCATTGTTGACAAGCCTTGCA 59.931 47.619 3.88 0.82 39.47 4.08
1591 1626 1.340889 TCCATTGTTGACAAGCCTTGC 59.659 47.619 3.88 0.00 39.47 4.01
1592 1627 3.731652 TTCCATTGTTGACAAGCCTTG 57.268 42.857 2.11 2.11 39.47 3.61
1593 1628 3.555586 GCATTCCATTGTTGACAAGCCTT 60.556 43.478 2.77 0.00 39.47 4.35
1594 1629 2.028748 GCATTCCATTGTTGACAAGCCT 60.029 45.455 2.77 0.00 39.47 4.58
1595 1630 2.340337 GCATTCCATTGTTGACAAGCC 58.660 47.619 2.77 0.00 39.47 4.35
1596 1631 2.288948 TGGCATTCCATTGTTGACAAGC 60.289 45.455 2.77 0.00 39.47 4.01
1597 1632 3.663995 TGGCATTCCATTGTTGACAAG 57.336 42.857 2.77 0.00 39.47 3.16
1598 1633 3.640498 TCTTGGCATTCCATTGTTGACAA 59.360 39.130 0.00 0.00 43.05 3.18
1599 1634 3.229293 TCTTGGCATTCCATTGTTGACA 58.771 40.909 0.00 0.00 43.05 3.58
1600 1635 3.940209 TCTTGGCATTCCATTGTTGAC 57.060 42.857 0.00 0.00 43.05 3.18
1601 1636 4.952071 TTTCTTGGCATTCCATTGTTGA 57.048 36.364 0.00 0.00 43.05 3.18
1642 1677 2.978978 TCTGTGAATCCTGAGGTTCCAA 59.021 45.455 0.00 0.00 0.00 3.53
1644 1679 2.569404 ACTCTGTGAATCCTGAGGTTCC 59.431 50.000 0.00 0.00 35.43 3.62
1680 1715 2.108566 CCAGCATCCTCAGCCTCG 59.891 66.667 0.00 0.00 0.00 4.63
1790 1825 5.403466 GCAAAGCATAGCATTAGCATAAACC 59.597 40.000 0.00 0.00 45.49 3.27
1802 1837 1.901159 ACAAATGGGCAAAGCATAGCA 59.099 42.857 0.00 0.00 0.00 3.49
1815 1850 7.440523 AGTCTACTCTGCTAAAAACAAATGG 57.559 36.000 0.00 0.00 0.00 3.16
1942 1978 5.066505 CCAGTTTTAGCTCAAGAACTGTTGT 59.933 40.000 20.49 0.00 44.54 3.32
1948 1984 6.809630 AGATTCCAGTTTTAGCTCAAGAAC 57.190 37.500 0.00 0.00 0.00 3.01
1954 1990 7.674471 AGTGTTTAGATTCCAGTTTTAGCTC 57.326 36.000 0.00 0.00 0.00 4.09
1976 2012 8.701895 TCCTCAACCAACGATATCTAAATAAGT 58.298 33.333 0.34 0.00 0.00 2.24
1983 2026 5.773176 TGCTATCCTCAACCAACGATATCTA 59.227 40.000 0.34 0.00 0.00 1.98
1984 2027 4.588951 TGCTATCCTCAACCAACGATATCT 59.411 41.667 0.34 0.00 0.00 1.98
1985 2028 4.883083 TGCTATCCTCAACCAACGATATC 58.117 43.478 0.00 0.00 0.00 1.63
1986 2029 4.955811 TGCTATCCTCAACCAACGATAT 57.044 40.909 0.00 0.00 0.00 1.63
1987 2030 4.746535 TTGCTATCCTCAACCAACGATA 57.253 40.909 0.00 0.00 0.00 2.92
1988 2031 3.627395 TTGCTATCCTCAACCAACGAT 57.373 42.857 0.00 0.00 0.00 3.73
1989 2032 3.627395 ATTGCTATCCTCAACCAACGA 57.373 42.857 0.00 0.00 0.00 3.85
2000 2043 9.277565 CGCATATACACAAAATAATTGCTATCC 57.722 33.333 0.00 0.00 0.00 2.59
2049 2100 2.374184 CAGGAACAACCAACCACAGAA 58.626 47.619 0.00 0.00 42.04 3.02
2104 2155 7.035612 GGGCTAATTTGTTTCACTATTTCCAG 58.964 38.462 0.00 0.00 0.00 3.86
2112 2163 3.252554 TGGGGGCTAATTTGTTTCACT 57.747 42.857 0.00 0.00 0.00 3.41
2177 2229 7.235193 ACATGACTCTGAGCTTCTGGAATATAT 59.765 37.037 4.19 0.00 0.00 0.86
2179 2231 5.366186 ACATGACTCTGAGCTTCTGGAATAT 59.634 40.000 4.19 0.00 0.00 1.28
2187 2239 3.683822 CAGGAAACATGACTCTGAGCTTC 59.316 47.826 4.19 0.00 0.00 3.86
2196 2248 2.936202 AGTTGCACAGGAAACATGACT 58.064 42.857 0.00 0.00 34.75 3.41
2244 2296 7.594714 TGACTCACTAGAGAAGTATGTTCAAC 58.405 38.462 0.00 0.00 44.98 3.18
2251 2303 6.119536 CAGGACTGACTCACTAGAGAAGTAT 58.880 44.000 0.00 0.00 44.98 2.12
2309 2620 3.848019 GCAAACGCTATCAGAAACATGTG 59.152 43.478 0.00 0.00 0.00 3.21
2425 2739 1.701847 ACAGTTCAGCCACAGGAAGAT 59.298 47.619 0.00 0.00 0.00 2.40
2444 2758 8.125448 GCCATAAAGAAACACTGAGATGATAAC 58.875 37.037 0.00 0.00 0.00 1.89
2446 2760 7.568349 AGCCATAAAGAAACACTGAGATGATA 58.432 34.615 0.00 0.00 0.00 2.15
2464 2778 7.004086 CCTCAACCAAATATAGGAAGCCATAA 58.996 38.462 1.37 0.00 0.00 1.90
2513 2829 5.245977 ACCCAACCCAAAAGAAACATATGAG 59.754 40.000 10.38 0.00 0.00 2.90
2524 2848 2.884639 CAGACTACACCCAACCCAAAAG 59.115 50.000 0.00 0.00 0.00 2.27
2529 2853 1.349067 AGACAGACTACACCCAACCC 58.651 55.000 0.00 0.00 0.00 4.11
2536 2860 9.303537 GGTTCAATAATAGAAGACAGACTACAC 57.696 37.037 0.00 0.00 0.00 2.90
2545 2870 8.398665 GGTTCACATGGTTCAATAATAGAAGAC 58.601 37.037 0.00 0.00 0.00 3.01
2550 2875 8.685427 TGATTGGTTCACATGGTTCAATAATAG 58.315 33.333 0.00 0.00 0.00 1.73
2566 2891 2.703416 CTGCTAGCAGTGATTGGTTCA 58.297 47.619 32.46 0.00 38.70 3.18
2687 3017 8.784043 AGAATACAACCAAGTGATTAGACAAAC 58.216 33.333 0.00 0.00 0.00 2.93
2724 3054 8.907885 GTCAAATTAGGAGGCAAAAGATAATCT 58.092 33.333 0.00 0.00 0.00 2.40
2728 3058 7.615365 ACATGTCAAATTAGGAGGCAAAAGATA 59.385 33.333 0.00 0.00 0.00 1.98
2853 3184 5.580691 TCATTTCACGGTACTCATCATCAAC 59.419 40.000 0.00 0.00 0.00 3.18
2861 3192 5.471556 TTAACCTCATTTCACGGTACTCA 57.528 39.130 0.00 0.00 0.00 3.41
2864 3195 3.998341 TGCTTAACCTCATTTCACGGTAC 59.002 43.478 0.00 0.00 0.00 3.34
3099 3430 1.568504 TCTACACGAGCAATTCCCCT 58.431 50.000 0.00 0.00 0.00 4.79
3143 3474 6.860023 CGATCTCAAAGTTCTTTGCTGAAATT 59.140 34.615 17.29 6.48 36.06 1.82
3282 3613 9.719433 AGGGAGTACTAGGTAAAAATATGTACA 57.281 33.333 0.00 0.00 33.45 2.90
3297 3628 3.002038 AGTGAACGGAGGGAGTACTAG 57.998 52.381 0.00 0.00 0.00 2.57
3298 3629 3.009916 AGAAGTGAACGGAGGGAGTACTA 59.990 47.826 0.00 0.00 0.00 1.82
3299 3630 2.169330 GAAGTGAACGGAGGGAGTACT 58.831 52.381 0.00 0.00 0.00 2.73
3303 3634 4.888239 TCTTATAGAAGTGAACGGAGGGAG 59.112 45.833 0.00 0.00 34.03 4.30
3304 3635 4.643784 GTCTTATAGAAGTGAACGGAGGGA 59.356 45.833 0.00 0.00 34.03 4.20
3306 3637 4.096081 ACGTCTTATAGAAGTGAACGGAGG 59.904 45.833 12.57 0.00 35.66 4.30
3307 3638 5.232610 ACGTCTTATAGAAGTGAACGGAG 57.767 43.478 12.57 0.00 35.66 4.63
3308 3639 5.633830 AACGTCTTATAGAAGTGAACGGA 57.366 39.130 12.57 0.00 37.04 4.69
3309 3640 5.860182 TGAAACGTCTTATAGAAGTGAACGG 59.140 40.000 12.57 0.00 37.04 4.44
3310 3641 6.033619 CCTGAAACGTCTTATAGAAGTGAACG 59.966 42.308 7.92 7.92 37.04 3.95
3311 3642 6.183360 GCCTGAAACGTCTTATAGAAGTGAAC 60.183 42.308 0.00 0.00 37.04 3.18
3312 3643 5.867716 GCCTGAAACGTCTTATAGAAGTGAA 59.132 40.000 0.00 0.00 37.04 3.18
3313 3644 5.408356 GCCTGAAACGTCTTATAGAAGTGA 58.592 41.667 0.00 0.00 37.04 3.41
3314 3645 4.265556 CGCCTGAAACGTCTTATAGAAGTG 59.734 45.833 0.00 0.00 37.04 3.16
3315 3646 4.157289 TCGCCTGAAACGTCTTATAGAAGT 59.843 41.667 0.00 0.00 38.56 3.01
3316 3647 4.669318 TCGCCTGAAACGTCTTATAGAAG 58.331 43.478 0.00 0.00 0.00 2.85
3318 3649 3.943381 TCTCGCCTGAAACGTCTTATAGA 59.057 43.478 0.00 0.00 0.00 1.98
3319 3650 4.036352 GTCTCGCCTGAAACGTCTTATAG 58.964 47.826 0.00 0.00 0.00 1.31
3320 3651 3.181493 GGTCTCGCCTGAAACGTCTTATA 60.181 47.826 0.00 0.00 0.00 0.98
3322 3653 1.068055 GGTCTCGCCTGAAACGTCTTA 60.068 52.381 0.00 0.00 0.00 2.10
3323 3654 0.319641 GGTCTCGCCTGAAACGTCTT 60.320 55.000 0.00 0.00 0.00 3.01
3324 3655 1.289380 GGTCTCGCCTGAAACGTCT 59.711 57.895 0.00 0.00 0.00 4.18
3325 3656 3.857909 GGTCTCGCCTGAAACGTC 58.142 61.111 0.00 0.00 0.00 4.34
3350 3681 8.376942 CGCACCGCAACTTTTATTAAAATAAAT 58.623 29.630 8.33 0.00 39.73 1.40
3351 3682 7.148787 CCGCACCGCAACTTTTATTAAAATAAA 60.149 33.333 2.20 4.20 38.65 1.40
3352 3683 6.308282 CCGCACCGCAACTTTTATTAAAATAA 59.692 34.615 2.20 0.00 0.00 1.40
3353 3684 5.800941 CCGCACCGCAACTTTTATTAAAATA 59.199 36.000 2.20 0.00 0.00 1.40
3354 3685 4.623595 CCGCACCGCAACTTTTATTAAAAT 59.376 37.500 2.20 0.00 0.00 1.82
3355 3686 3.982058 CCGCACCGCAACTTTTATTAAAA 59.018 39.130 1.85 1.85 0.00 1.52
3356 3687 3.004524 ACCGCACCGCAACTTTTATTAAA 59.995 39.130 0.00 0.00 0.00 1.52
3357 3688 2.553172 ACCGCACCGCAACTTTTATTAA 59.447 40.909 0.00 0.00 0.00 1.40
3358 3689 2.152830 ACCGCACCGCAACTTTTATTA 58.847 42.857 0.00 0.00 0.00 0.98
3359 3690 0.955905 ACCGCACCGCAACTTTTATT 59.044 45.000 0.00 0.00 0.00 1.40
3360 3691 0.955905 AACCGCACCGCAACTTTTAT 59.044 45.000 0.00 0.00 0.00 1.40
3361 3692 0.739561 AAACCGCACCGCAACTTTTA 59.260 45.000 0.00 0.00 0.00 1.52
3362 3693 0.108567 AAAACCGCACCGCAACTTTT 60.109 45.000 0.00 0.00 0.00 2.27
3363 3694 0.739561 TAAAACCGCACCGCAACTTT 59.260 45.000 0.00 0.00 0.00 2.66
3364 3695 0.029700 GTAAAACCGCACCGCAACTT 59.970 50.000 0.00 0.00 0.00 2.66
3365 3696 1.650363 GTAAAACCGCACCGCAACT 59.350 52.632 0.00 0.00 0.00 3.16
3366 3697 1.370778 GGTAAAACCGCACCGCAAC 60.371 57.895 0.00 0.00 0.00 4.17
3367 3698 2.553727 GGGTAAAACCGCACCGCAA 61.554 57.895 0.00 0.00 39.83 4.85
3368 3699 2.979120 GGGTAAAACCGCACCGCA 60.979 61.111 0.00 0.00 39.83 5.69
3375 3706 5.247862 ACTATAAACAGTGGGGTAAAACCG 58.752 41.667 0.00 0.00 39.83 4.44
3376 3707 8.634335 TTTACTATAAACAGTGGGGTAAAACC 57.366 34.615 0.00 0.00 37.60 3.27
3402 3733 3.938963 TGAGCTGTCTGAAACGTCTTTTT 59.061 39.130 0.00 0.00 0.00 1.94
3403 3734 3.309954 GTGAGCTGTCTGAAACGTCTTTT 59.690 43.478 0.00 0.00 0.00 2.27
3404 3735 2.866762 GTGAGCTGTCTGAAACGTCTTT 59.133 45.455 0.00 0.00 0.00 2.52
3405 3736 2.474816 GTGAGCTGTCTGAAACGTCTT 58.525 47.619 0.00 0.00 0.00 3.01
3406 3737 1.600663 CGTGAGCTGTCTGAAACGTCT 60.601 52.381 0.00 0.00 0.00 4.18
3407 3738 0.778815 CGTGAGCTGTCTGAAACGTC 59.221 55.000 0.00 0.00 0.00 4.34
3408 3739 0.102481 ACGTGAGCTGTCTGAAACGT 59.898 50.000 0.00 0.00 0.00 3.99
3409 3740 1.071239 CAACGTGAGCTGTCTGAAACG 60.071 52.381 0.00 0.00 0.00 3.60
3410 3741 2.201732 TCAACGTGAGCTGTCTGAAAC 58.798 47.619 0.00 0.00 0.00 2.78
3411 3742 2.595124 TCAACGTGAGCTGTCTGAAA 57.405 45.000 0.00 0.00 0.00 2.69
3412 3743 2.159099 AGTTCAACGTGAGCTGTCTGAA 60.159 45.455 0.00 0.00 36.56 3.02
3413 3744 1.409064 AGTTCAACGTGAGCTGTCTGA 59.591 47.619 0.00 0.00 36.56 3.27
3414 3745 1.524355 CAGTTCAACGTGAGCTGTCTG 59.476 52.381 17.37 9.52 46.36 3.51
3415 3746 1.858091 CAGTTCAACGTGAGCTGTCT 58.142 50.000 17.37 3.11 46.36 3.41
3419 3750 2.604046 AGAACAGTTCAACGTGAGCT 57.396 45.000 15.85 0.00 38.51 4.09
3420 3751 2.731976 CCTAGAACAGTTCAACGTGAGC 59.268 50.000 15.85 0.00 0.00 4.26
3421 3752 3.736252 CACCTAGAACAGTTCAACGTGAG 59.264 47.826 15.85 2.97 0.00 3.51
3422 3753 3.382227 TCACCTAGAACAGTTCAACGTGA 59.618 43.478 15.85 17.37 31.77 4.35
3423 3754 3.713288 TCACCTAGAACAGTTCAACGTG 58.287 45.455 15.85 15.63 0.00 4.49
3424 3755 4.202223 ACATCACCTAGAACAGTTCAACGT 60.202 41.667 15.85 4.89 0.00 3.99
3425 3756 4.307432 ACATCACCTAGAACAGTTCAACG 58.693 43.478 15.85 4.28 0.00 4.10
3426 3757 5.406780 CAGACATCACCTAGAACAGTTCAAC 59.593 44.000 15.85 0.00 0.00 3.18
3427 3758 5.304357 TCAGACATCACCTAGAACAGTTCAA 59.696 40.000 15.85 0.00 0.00 2.69
3428 3759 4.832823 TCAGACATCACCTAGAACAGTTCA 59.167 41.667 15.85 1.16 0.00 3.18
3429 3760 5.392767 TCAGACATCACCTAGAACAGTTC 57.607 43.478 5.00 5.00 0.00 3.01
3430 3761 5.808366 TTCAGACATCACCTAGAACAGTT 57.192 39.130 0.00 0.00 0.00 3.16
3431 3762 6.169094 CAATTCAGACATCACCTAGAACAGT 58.831 40.000 0.00 0.00 0.00 3.55
3432 3763 6.169094 ACAATTCAGACATCACCTAGAACAG 58.831 40.000 0.00 0.00 0.00 3.16
3433 3764 6.014242 AGACAATTCAGACATCACCTAGAACA 60.014 38.462 0.00 0.00 0.00 3.18
3434 3765 6.402222 AGACAATTCAGACATCACCTAGAAC 58.598 40.000 0.00 0.00 0.00 3.01
3435 3766 6.611613 AGACAATTCAGACATCACCTAGAA 57.388 37.500 0.00 0.00 0.00 2.10
3436 3767 6.663523 TGTAGACAATTCAGACATCACCTAGA 59.336 38.462 0.00 0.00 0.00 2.43
3437 3768 6.867550 TGTAGACAATTCAGACATCACCTAG 58.132 40.000 0.00 0.00 0.00 3.02
3438 3769 6.850752 TGTAGACAATTCAGACATCACCTA 57.149 37.500 0.00 0.00 0.00 3.08
3439 3770 5.745312 TGTAGACAATTCAGACATCACCT 57.255 39.130 0.00 0.00 0.00 4.00
3440 3771 5.163953 CGTTGTAGACAATTCAGACATCACC 60.164 44.000 0.00 0.00 38.24 4.02
3441 3772 5.405571 ACGTTGTAGACAATTCAGACATCAC 59.594 40.000 0.00 0.00 38.24 3.06
3442 3773 5.538118 ACGTTGTAGACAATTCAGACATCA 58.462 37.500 0.00 0.00 38.24 3.07
3443 3774 5.864474 AGACGTTGTAGACAATTCAGACATC 59.136 40.000 0.00 0.00 38.24 3.06
3444 3775 5.784177 AGACGTTGTAGACAATTCAGACAT 58.216 37.500 0.00 0.00 38.24 3.06
3445 3776 5.196341 AGACGTTGTAGACAATTCAGACA 57.804 39.130 0.00 0.00 38.24 3.41
3446 3777 7.813852 ATAAGACGTTGTAGACAATTCAGAC 57.186 36.000 0.00 0.00 38.24 3.51
3447 3778 9.917129 TTTATAAGACGTTGTAGACAATTCAGA 57.083 29.630 0.00 0.00 38.24 3.27
3459 3790 8.985805 CCTCTGTTTACTTTTATAAGACGTTGT 58.014 33.333 0.00 0.00 35.30 3.32
3460 3791 8.440833 CCCTCTGTTTACTTTTATAAGACGTTG 58.559 37.037 0.00 0.00 35.30 4.10
3461 3792 8.370182 TCCCTCTGTTTACTTTTATAAGACGTT 58.630 33.333 0.00 0.00 35.30 3.99
3462 3793 7.899973 TCCCTCTGTTTACTTTTATAAGACGT 58.100 34.615 0.00 0.00 35.30 4.34
3463 3794 8.033626 ACTCCCTCTGTTTACTTTTATAAGACG 58.966 37.037 0.00 0.00 35.30 4.18
3471 3802 9.503399 CAAATACTACTCCCTCTGTTTACTTTT 57.497 33.333 0.00 0.00 0.00 2.27
3472 3803 8.657712 ACAAATACTACTCCCTCTGTTTACTTT 58.342 33.333 0.00 0.00 0.00 2.66
3473 3804 8.203681 ACAAATACTACTCCCTCTGTTTACTT 57.796 34.615 0.00 0.00 0.00 2.24
3474 3805 7.793948 ACAAATACTACTCCCTCTGTTTACT 57.206 36.000 0.00 0.00 0.00 2.24
3475 3806 9.583765 CTAACAAATACTACTCCCTCTGTTTAC 57.416 37.037 0.00 0.00 0.00 2.01
3476 3807 8.255905 GCTAACAAATACTACTCCCTCTGTTTA 58.744 37.037 0.00 0.00 0.00 2.01
3477 3808 7.038231 AGCTAACAAATACTACTCCCTCTGTTT 60.038 37.037 0.00 0.00 0.00 2.83
3478 3809 6.440965 AGCTAACAAATACTACTCCCTCTGTT 59.559 38.462 0.00 0.00 0.00 3.16
3479 3810 5.958987 AGCTAACAAATACTACTCCCTCTGT 59.041 40.000 0.00 0.00 0.00 3.41
3480 3811 6.472686 AGCTAACAAATACTACTCCCTCTG 57.527 41.667 0.00 0.00 0.00 3.35
3481 3812 6.098552 GGAAGCTAACAAATACTACTCCCTCT 59.901 42.308 0.00 0.00 0.00 3.69
3482 3813 6.098552 AGGAAGCTAACAAATACTACTCCCTC 59.901 42.308 0.00 0.00 0.00 4.30
3483 3814 5.965091 AGGAAGCTAACAAATACTACTCCCT 59.035 40.000 0.00 0.00 0.00 4.20
3484 3815 6.236558 AGGAAGCTAACAAATACTACTCCC 57.763 41.667 0.00 0.00 0.00 4.30
3485 3816 7.104290 ACAAGGAAGCTAACAAATACTACTCC 58.896 38.462 0.00 0.00 0.00 3.85
3486 3817 8.443937 CAACAAGGAAGCTAACAAATACTACTC 58.556 37.037 0.00 0.00 0.00 2.59
3487 3818 7.390718 CCAACAAGGAAGCTAACAAATACTACT 59.609 37.037 0.00 0.00 41.22 2.57
3488 3819 7.174426 ACCAACAAGGAAGCTAACAAATACTAC 59.826 37.037 0.00 0.00 41.22 2.73
3489 3820 7.174253 CACCAACAAGGAAGCTAACAAATACTA 59.826 37.037 0.00 0.00 41.22 1.82
3521 3852 8.504812 TCTGCTTATGTGCAATAAGATTAACA 57.495 30.769 22.23 13.75 42.83 2.41
3532 3863 6.100404 AGGAAAAATTCTGCTTATGTGCAA 57.900 33.333 0.00 0.00 42.83 4.08
3534 3865 8.598075 CAATAAGGAAAAATTCTGCTTATGTGC 58.402 33.333 12.24 0.00 30.02 4.57
3535 3866 9.859427 TCAATAAGGAAAAATTCTGCTTATGTG 57.141 29.630 12.24 12.01 30.02 3.21
3557 3937 5.477984 ACACTGCATGTCTGGTTAATTCAAT 59.522 36.000 0.00 0.00 36.54 2.57
3617 3997 5.089970 TCTCACACAACAGCTAATAGCAT 57.910 39.130 15.28 0.00 45.56 3.79
3625 4005 3.947196 TGAATGTTTCTCACACAACAGCT 59.053 39.130 0.00 0.00 38.61 4.24
3659 4039 9.313118 GACAAGTCTAAAACCACATTTCATTTT 57.687 29.630 0.00 0.00 0.00 1.82
3674 4056 8.990163 AGGAAAACATTTAGGACAAGTCTAAA 57.010 30.769 0.00 0.00 39.88 1.85
3676 4058 7.974504 AGAGGAAAACATTTAGGACAAGTCTA 58.025 34.615 0.00 0.00 0.00 2.59
3704 4087 2.497675 GCCTGGACATCTCTGTAAGACA 59.502 50.000 0.00 0.00 38.67 3.41
3705 4088 2.497675 TGCCTGGACATCTCTGTAAGAC 59.502 50.000 0.00 0.00 38.67 3.01
3710 4093 1.002888 CTGTTGCCTGGACATCTCTGT 59.997 52.381 0.00 0.00 38.67 3.41
3922 4305 9.563748 TCTCTAGGAAGTATAGTTAGAGCTTTC 57.436 37.037 11.47 0.00 38.03 2.62
4034 4417 0.186873 GGAGATGGCCCATTCCACAT 59.813 55.000 15.79 0.00 39.25 3.21
4070 4459 0.463204 GACTTACGGTAAGGGGGAGC 59.537 60.000 26.67 9.18 40.08 4.70
4236 4625 8.903820 GGCATATAATCAAACCTACAGAAACTT 58.096 33.333 0.00 0.00 0.00 2.66
4237 4626 8.275040 AGGCATATAATCAAACCTACAGAAACT 58.725 33.333 0.00 0.00 0.00 2.66
4347 4738 3.876156 GCTGGCCAGACTACCCATAAAAA 60.876 47.826 37.21 0.00 0.00 1.94
4348 4739 2.356741 GCTGGCCAGACTACCCATAAAA 60.357 50.000 37.21 0.00 0.00 1.52
4349 4740 1.211949 GCTGGCCAGACTACCCATAAA 59.788 52.381 37.21 0.00 0.00 1.40
4350 4741 0.837272 GCTGGCCAGACTACCCATAA 59.163 55.000 37.21 0.00 0.00 1.90
4351 4742 0.326143 TGCTGGCCAGACTACCCATA 60.326 55.000 37.21 6.95 0.00 2.74
4352 4743 1.207488 TTGCTGGCCAGACTACCCAT 61.207 55.000 37.21 0.00 0.00 4.00
4353 4744 1.422977 TTTGCTGGCCAGACTACCCA 61.423 55.000 37.21 20.18 0.00 4.51
4354 4745 0.678048 CTTTGCTGGCCAGACTACCC 60.678 60.000 37.21 17.63 0.00 3.69
4355 4746 0.324943 TCTTTGCTGGCCAGACTACC 59.675 55.000 37.21 18.40 0.00 3.18
4356 4747 1.276421 TCTCTTTGCTGGCCAGACTAC 59.724 52.381 37.21 18.80 0.00 2.73
4357 4748 1.552337 CTCTCTTTGCTGGCCAGACTA 59.448 52.381 37.21 20.39 0.00 2.59
4358 4749 0.324285 CTCTCTTTGCTGGCCAGACT 59.676 55.000 37.21 0.00 0.00 3.24
4359 4750 0.322975 TCTCTCTTTGCTGGCCAGAC 59.677 55.000 37.21 25.98 0.00 3.51
4360 4751 0.612229 CTCTCTCTTTGCTGGCCAGA 59.388 55.000 37.21 18.42 0.00 3.86
4361 4752 0.612229 TCTCTCTCTTTGCTGGCCAG 59.388 55.000 29.34 29.34 0.00 4.85
4362 4753 0.612229 CTCTCTCTCTTTGCTGGCCA 59.388 55.000 4.71 4.71 0.00 5.36
4363 4754 0.107752 CCTCTCTCTCTTTGCTGGCC 60.108 60.000 0.00 0.00 0.00 5.36
4364 4755 0.901124 TCCTCTCTCTCTTTGCTGGC 59.099 55.000 0.00 0.00 0.00 4.85
4365 4756 2.428171 CTCTCCTCTCTCTCTTTGCTGG 59.572 54.545 0.00 0.00 0.00 4.85
4366 4757 2.428171 CCTCTCCTCTCTCTCTTTGCTG 59.572 54.545 0.00 0.00 0.00 4.41
4367 4758 2.624029 CCCTCTCCTCTCTCTCTTTGCT 60.624 54.545 0.00 0.00 0.00 3.91
4368 4759 1.756538 CCCTCTCCTCTCTCTCTTTGC 59.243 57.143 0.00 0.00 0.00 3.68
4369 4760 1.756538 GCCCTCTCCTCTCTCTCTTTG 59.243 57.143 0.00 0.00 0.00 2.77
4370 4761 1.684869 CGCCCTCTCCTCTCTCTCTTT 60.685 57.143 0.00 0.00 0.00 2.52
4371 4762 0.106719 CGCCCTCTCCTCTCTCTCTT 60.107 60.000 0.00 0.00 0.00 2.85
4372 4763 0.986019 TCGCCCTCTCCTCTCTCTCT 60.986 60.000 0.00 0.00 0.00 3.10
4373 4764 0.110486 ATCGCCCTCTCCTCTCTCTC 59.890 60.000 0.00 0.00 0.00 3.20
4374 4765 0.555769 AATCGCCCTCTCCTCTCTCT 59.444 55.000 0.00 0.00 0.00 3.10
4375 4766 0.958822 GAATCGCCCTCTCCTCTCTC 59.041 60.000 0.00 0.00 0.00 3.20
4376 4767 0.469144 GGAATCGCCCTCTCCTCTCT 60.469 60.000 0.00 0.00 0.00 3.10
4377 4768 0.757188 TGGAATCGCCCTCTCCTCTC 60.757 60.000 0.00 0.00 34.97 3.20
4378 4769 0.758685 CTGGAATCGCCCTCTCCTCT 60.759 60.000 0.00 0.00 34.97 3.69
4379 4770 1.745264 CTGGAATCGCCCTCTCCTC 59.255 63.158 0.00 0.00 34.97 3.71
4380 4771 2.439104 GCTGGAATCGCCCTCTCCT 61.439 63.158 0.00 0.00 34.97 3.69
4381 4772 2.110006 GCTGGAATCGCCCTCTCC 59.890 66.667 0.00 0.00 34.97 3.71
4382 4773 2.110006 GGCTGGAATCGCCCTCTC 59.890 66.667 0.00 0.00 41.73 3.20
4461 4854 3.081804 AGGTTGGTTGAATAAAGAGCCG 58.918 45.455 0.00 0.00 0.00 5.52
4480 4873 1.734465 CGGCTGCTGAGTTTAAAGAGG 59.266 52.381 1.17 0.00 0.00 3.69
4483 4876 2.143122 TGTCGGCTGCTGAGTTTAAAG 58.857 47.619 12.25 0.00 0.00 1.85
4484 4877 2.248280 TGTCGGCTGCTGAGTTTAAA 57.752 45.000 12.25 0.00 0.00 1.52
4485 4878 2.472695 ATGTCGGCTGCTGAGTTTAA 57.527 45.000 12.25 0.00 0.00 1.52
4486 4879 2.738643 GCTATGTCGGCTGCTGAGTTTA 60.739 50.000 12.25 3.38 0.00 2.01
4487 4880 2.009042 GCTATGTCGGCTGCTGAGTTT 61.009 52.381 12.25 2.31 0.00 2.66
4488 4881 0.460987 GCTATGTCGGCTGCTGAGTT 60.461 55.000 12.25 4.90 0.00 3.01
4489 4882 1.142748 GCTATGTCGGCTGCTGAGT 59.857 57.895 12.25 6.48 0.00 3.41
4490 4883 0.179089 AAGCTATGTCGGCTGCTGAG 60.179 55.000 12.25 0.96 40.19 3.35
4491 4884 0.460811 CAAGCTATGTCGGCTGCTGA 60.461 55.000 7.16 7.16 40.19 4.26
4492 4885 2.012237 CAAGCTATGTCGGCTGCTG 58.988 57.895 0.95 0.95 40.19 4.41
4493 4886 1.817099 GCAAGCTATGTCGGCTGCT 60.817 57.895 0.00 0.00 40.19 4.24
4494 4887 2.711924 GCAAGCTATGTCGGCTGC 59.288 61.111 0.00 0.00 40.19 5.25
4495 4888 2.182842 GGGCAAGCTATGTCGGCTG 61.183 63.158 0.00 0.00 40.19 4.85
4496 4889 2.190578 GGGCAAGCTATGTCGGCT 59.809 61.111 0.00 0.00 42.31 5.52
4497 4890 2.902343 GGGGCAAGCTATGTCGGC 60.902 66.667 0.00 0.00 33.14 5.54
4498 4891 2.588877 CGGGGCAAGCTATGTCGG 60.589 66.667 0.00 0.00 33.14 4.79
4499 4892 3.272334 GCGGGGCAAGCTATGTCG 61.272 66.667 0.00 0.00 33.14 4.35
4500 4893 3.272334 CGCGGGGCAAGCTATGTC 61.272 66.667 0.00 0.00 0.00 3.06
4511 4904 4.137872 TTAAGACGAGGCGCGGGG 62.138 66.667 16.41 0.00 46.49 5.73
4512 4905 2.582498 CTTAAGACGAGGCGCGGG 60.582 66.667 16.41 0.00 46.49 6.13
4513 4906 3.255379 GCTTAAGACGAGGCGCGG 61.255 66.667 16.41 0.00 46.49 6.46
4515 4908 0.736325 TCTTGCTTAAGACGAGGCGC 60.736 55.000 6.67 0.00 0.00 6.53
4516 4909 1.272781 CTCTTGCTTAAGACGAGGCG 58.727 55.000 6.67 0.00 0.00 5.52
4517 4910 1.204941 TCCTCTTGCTTAAGACGAGGC 59.795 52.381 21.21 3.44 40.76 4.70
4518 4911 2.494073 ACTCCTCTTGCTTAAGACGAGG 59.506 50.000 20.49 20.49 42.00 4.63
4519 4912 3.859411 ACTCCTCTTGCTTAAGACGAG 57.141 47.619 6.67 7.18 37.70 4.18
4520 4913 3.695060 CCTACTCCTCTTGCTTAAGACGA 59.305 47.826 6.67 0.00 0.00 4.20
4521 4914 3.695060 TCCTACTCCTCTTGCTTAAGACG 59.305 47.826 6.67 0.00 0.00 4.18
4522 4915 4.142116 GGTCCTACTCCTCTTGCTTAAGAC 60.142 50.000 6.67 0.00 0.00 3.01
4523 4916 4.024670 GGTCCTACTCCTCTTGCTTAAGA 58.975 47.826 6.67 0.00 0.00 2.10
4526 4919 3.245658 ACAGGTCCTACTCCTCTTGCTTA 60.246 47.826 0.00 0.00 32.37 3.09
4528 4921 1.077993 ACAGGTCCTACTCCTCTTGCT 59.922 52.381 0.00 0.00 32.37 3.91
4563 4956 1.674441 GTTATAGAAACCGGGCCAAGC 59.326 52.381 6.32 0.00 0.00 4.01
4564 4957 3.118371 AGAGTTATAGAAACCGGGCCAAG 60.118 47.826 6.32 0.00 0.00 3.61
4567 4960 2.699321 AGAGAGTTATAGAAACCGGGCC 59.301 50.000 6.32 0.00 0.00 5.80
4568 4961 3.132467 ACAGAGAGTTATAGAAACCGGGC 59.868 47.826 6.32 0.00 0.00 6.13
4569 4962 4.683832 CACAGAGAGTTATAGAAACCGGG 58.316 47.826 6.32 0.00 0.00 5.73
4570 4963 4.113354 GCACAGAGAGTTATAGAAACCGG 58.887 47.826 0.00 0.00 0.00 5.28
4571 4964 5.000012 AGCACAGAGAGTTATAGAAACCG 58.000 43.478 0.00 0.00 0.00 4.44
4573 4966 5.513495 CACGAGCACAGAGAGTTATAGAAAC 59.487 44.000 0.00 0.00 0.00 2.78
4577 4970 3.378742 ACCACGAGCACAGAGAGTTATAG 59.621 47.826 0.00 0.00 0.00 1.31
4578 4971 3.128764 CACCACGAGCACAGAGAGTTATA 59.871 47.826 0.00 0.00 0.00 0.98
4579 4972 2.094494 CACCACGAGCACAGAGAGTTAT 60.094 50.000 0.00 0.00 0.00 1.89
4581 4974 0.032678 CACCACGAGCACAGAGAGTT 59.967 55.000 0.00 0.00 0.00 3.01
4582 4975 0.823769 TCACCACGAGCACAGAGAGT 60.824 55.000 0.00 0.00 0.00 3.24
4585 4978 0.738762 CCATCACCACGAGCACAGAG 60.739 60.000 0.00 0.00 0.00 3.35
4586 4979 1.184970 TCCATCACCACGAGCACAGA 61.185 55.000 0.00 0.00 0.00 3.41
4587 4980 0.107993 ATCCATCACCACGAGCACAG 60.108 55.000 0.00 0.00 0.00 3.66
4588 4981 0.324614 AATCCATCACCACGAGCACA 59.675 50.000 0.00 0.00 0.00 4.57
4589 4982 0.729116 CAATCCATCACCACGAGCAC 59.271 55.000 0.00 0.00 0.00 4.40
4590 4983 1.026182 GCAATCCATCACCACGAGCA 61.026 55.000 0.00 0.00 0.00 4.26
4591 4984 1.026182 TGCAATCCATCACCACGAGC 61.026 55.000 0.00 0.00 0.00 5.03
4592 4985 1.399440 CTTGCAATCCATCACCACGAG 59.601 52.381 0.00 0.00 0.00 4.18
4593 4986 1.452110 CTTGCAATCCATCACCACGA 58.548 50.000 0.00 0.00 0.00 4.35
4594 4987 0.452987 CCTTGCAATCCATCACCACG 59.547 55.000 0.00 0.00 0.00 4.94
4595 4988 0.174162 GCCTTGCAATCCATCACCAC 59.826 55.000 0.00 0.00 0.00 4.16
4596 4989 0.040058 AGCCTTGCAATCCATCACCA 59.960 50.000 0.00 0.00 0.00 4.17
4597 4990 0.458669 CAGCCTTGCAATCCATCACC 59.541 55.000 0.00 0.00 0.00 4.02
4599 4992 1.820519 GAACAGCCTTGCAATCCATCA 59.179 47.619 0.00 0.00 0.00 3.07
4600 4993 2.097825 AGAACAGCCTTGCAATCCATC 58.902 47.619 0.00 0.00 0.00 3.51
4601 4994 1.822990 CAGAACAGCCTTGCAATCCAT 59.177 47.619 0.00 0.00 0.00 3.41
4602 4995 1.250328 CAGAACAGCCTTGCAATCCA 58.750 50.000 0.00 0.00 0.00 3.41
4603 4996 0.529378 CCAGAACAGCCTTGCAATCC 59.471 55.000 0.00 0.00 0.00 3.01
4606 4999 1.108727 CACCCAGAACAGCCTTGCAA 61.109 55.000 0.00 0.00 0.00 4.08
4607 5000 1.529010 CACCCAGAACAGCCTTGCA 60.529 57.895 0.00 0.00 0.00 4.08
4608 5001 2.270986 CCACCCAGAACAGCCTTGC 61.271 63.158 0.00 0.00 0.00 4.01
4609 5002 1.604593 CCCACCCAGAACAGCCTTG 60.605 63.158 0.00 0.00 0.00 3.61
4610 5003 2.845345 CCCCACCCAGAACAGCCTT 61.845 63.158 0.00 0.00 0.00 4.35
4613 5006 3.927481 GAGCCCCACCCAGAACAGC 62.927 68.421 0.00 0.00 0.00 4.40
4614 5007 2.352805 GAGCCCCACCCAGAACAG 59.647 66.667 0.00 0.00 0.00 3.16
4616 5009 2.840753 TTGGAGCCCCACCCAGAAC 61.841 63.158 0.00 0.00 43.41 3.01
4618 5011 3.256960 GTTGGAGCCCCACCCAGA 61.257 66.667 0.00 0.00 43.41 3.86
4619 5012 4.366684 GGTTGGAGCCCCACCCAG 62.367 72.222 0.00 0.00 43.91 4.45
4622 5015 2.372074 TATCGGTTGGAGCCCCACC 61.372 63.158 0.00 0.00 43.41 4.61
4623 5016 1.153229 GTATCGGTTGGAGCCCCAC 60.153 63.158 0.00 0.00 43.41 4.61
4626 5019 1.523938 GCAGTATCGGTTGGAGCCC 60.524 63.158 0.00 0.00 0.00 5.19
4627 5020 0.107654 AAGCAGTATCGGTTGGAGCC 60.108 55.000 0.00 0.00 0.00 4.70
4628 5021 1.291132 GAAGCAGTATCGGTTGGAGC 58.709 55.000 0.00 0.00 0.00 4.70
4630 5023 2.695359 GTTGAAGCAGTATCGGTTGGA 58.305 47.619 0.00 0.00 0.00 3.53
4631 5024 1.393539 CGTTGAAGCAGTATCGGTTGG 59.606 52.381 0.00 0.00 0.00 3.77
4633 5026 2.736144 TCGTTGAAGCAGTATCGGTT 57.264 45.000 0.00 0.00 0.00 4.44
4634 5027 2.961526 ATCGTTGAAGCAGTATCGGT 57.038 45.000 0.00 0.00 0.00 4.69
4635 5028 4.600012 AAAATCGTTGAAGCAGTATCGG 57.400 40.909 0.00 0.00 0.00 4.18
4636 5029 6.989437 TCTAAAAATCGTTGAAGCAGTATCG 58.011 36.000 0.00 0.00 0.00 2.92
4639 5032 9.594478 TGATATCTAAAAATCGTTGAAGCAGTA 57.406 29.630 3.98 0.00 0.00 2.74
4640 5033 8.492673 TGATATCTAAAAATCGTTGAAGCAGT 57.507 30.769 3.98 0.00 0.00 4.40
4641 5034 9.941664 AATGATATCTAAAAATCGTTGAAGCAG 57.058 29.630 3.98 0.00 31.67 4.24
4656 5356 6.925718 CACTCGCTCCTTGAAATGATATCTAA 59.074 38.462 3.98 0.00 0.00 2.10
4662 5362 2.636830 CCACTCGCTCCTTGAAATGAT 58.363 47.619 0.00 0.00 0.00 2.45
4664 5364 0.449388 GCCACTCGCTCCTTGAAATG 59.551 55.000 0.00 0.00 0.00 2.32
4665 5365 2.859992 GCCACTCGCTCCTTGAAAT 58.140 52.632 0.00 0.00 0.00 2.17
4676 5376 0.532862 AAGACCACAACAGCCACTCG 60.533 55.000 0.00 0.00 0.00 4.18
4678 5378 2.143876 AAAAGACCACAACAGCCACT 57.856 45.000 0.00 0.00 0.00 4.00
4682 5382 3.068165 AGGCTTTAAAAGACCACAACAGC 59.932 43.478 0.00 0.00 37.17 4.40
4685 5385 3.383505 ACCAGGCTTTAAAAGACCACAAC 59.616 43.478 0.00 0.00 37.17 3.32
4689 5389 3.071312 TCGTACCAGGCTTTAAAAGACCA 59.929 43.478 0.00 0.00 37.17 4.02
4696 5396 3.167485 TCCTCTTCGTACCAGGCTTTAA 58.833 45.455 0.00 0.00 0.00 1.52
4697 5397 2.811410 TCCTCTTCGTACCAGGCTTTA 58.189 47.619 0.00 0.00 0.00 1.85
4700 5400 1.115467 CATCCTCTTCGTACCAGGCT 58.885 55.000 0.00 0.00 0.00 4.58
4701 5401 0.824759 ACATCCTCTTCGTACCAGGC 59.175 55.000 0.00 0.00 0.00 4.85
4703 5403 2.673368 GCAAACATCCTCTTCGTACCAG 59.327 50.000 0.00 0.00 0.00 4.00
4705 5405 2.695359 TGCAAACATCCTCTTCGTACC 58.305 47.619 0.00 0.00 0.00 3.34
4706 5406 3.684788 ACATGCAAACATCCTCTTCGTAC 59.315 43.478 0.00 0.00 32.87 3.67
4708 5408 2.485426 CACATGCAAACATCCTCTTCGT 59.515 45.455 0.00 0.00 32.87 3.85
4709 5409 2.485426 ACACATGCAAACATCCTCTTCG 59.515 45.455 0.00 0.00 32.87 3.79
4710 5410 4.232221 CAACACATGCAAACATCCTCTTC 58.768 43.478 0.00 0.00 32.87 2.87
4711 5411 4.247267 CAACACATGCAAACATCCTCTT 57.753 40.909 0.00 0.00 32.87 2.85
4712 5412 3.928727 CAACACATGCAAACATCCTCT 57.071 42.857 0.00 0.00 32.87 3.69
4759 5490 7.813627 GCATGCCACCAATCAAAAATTAAAAAT 59.186 29.630 6.36 0.00 0.00 1.82
4763 5494 5.311265 TGCATGCCACCAATCAAAAATTAA 58.689 33.333 16.68 0.00 0.00 1.40
4772 5503 3.243636 CCTCTAATTGCATGCCACCAATC 60.244 47.826 16.68 0.00 31.67 2.67
4773 5504 2.696707 CCTCTAATTGCATGCCACCAAT 59.303 45.455 16.68 5.11 33.35 3.16
4775 5506 1.284491 TCCTCTAATTGCATGCCACCA 59.716 47.619 16.68 0.00 0.00 4.17
4777 5508 3.282021 TCTTCCTCTAATTGCATGCCAC 58.718 45.455 16.68 0.00 0.00 5.01
4778 5509 3.650281 TCTTCCTCTAATTGCATGCCA 57.350 42.857 16.68 4.04 0.00 4.92
4838 5570 8.155821 TGGATAAACAATTGAACGTAGAACAA 57.844 30.769 13.59 0.00 0.00 2.83
4846 5578 9.702726 CTAGTACAATGGATAAACAATTGAACG 57.297 33.333 13.59 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.