Multiple sequence alignment - TraesCS6B01G299100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G299100 chr6B 100.000 7605 0 0 1 7605 536848948 536841344 0.000000e+00 14044.0
1 TraesCS6B01G299100 chr6B 82.822 326 41 8 4921 5238 398844833 398845151 2.090000e-70 278.0
2 TraesCS6B01G299100 chr6A 96.473 2240 63 3 225 2456 498594353 498592122 0.000000e+00 3685.0
3 TraesCS6B01G299100 chr6A 89.563 2884 189 42 4761 7605 498589773 498586963 0.000000e+00 3555.0
4 TraesCS6B01G299100 chr6A 92.204 1937 92 31 2612 4522 498592097 498590194 0.000000e+00 2686.0
5 TraesCS6B01G299100 chr6A 85.957 235 27 3 4536 4770 498590118 498589890 5.890000e-61 246.0
6 TraesCS6B01G299100 chr6D 92.446 2343 115 28 5300 7605 355872320 355870003 0.000000e+00 3290.0
7 TraesCS6B01G299100 chr6D 97.520 1895 40 2 569 2456 355877112 355875218 0.000000e+00 3232.0
8 TraesCS6B01G299100 chr6D 93.907 1953 67 27 2612 4525 355875193 355873254 0.000000e+00 2900.0
9 TraesCS6B01G299100 chr6D 85.199 777 86 16 4536 5302 355873181 355872424 0.000000e+00 771.0
10 TraesCS6B01G299100 chr6D 92.446 278 19 2 209 485 355880504 355880228 5.530000e-106 396.0
11 TraesCS6B01G299100 chr6D 84.638 345 43 4 4921 5261 174623426 174623764 1.220000e-87 335.0
12 TraesCS6B01G299100 chr6D 97.619 42 1 0 537 578 355877541 355877500 1.060000e-08 73.1
13 TraesCS6B01G299100 chr2A 81.991 211 35 3 5052 5261 285617425 285617217 7.840000e-40 176.0
14 TraesCS6B01G299100 chr2A 88.571 105 6 6 2515 2617 101846927 101847027 1.040000e-23 122.0
15 TraesCS6B01G299100 chr2A 87.850 107 4 7 2511 2614 79162435 79162535 4.820000e-22 117.0
16 TraesCS6B01G299100 chr3A 87.333 150 17 1 4921 5068 430659965 430660114 3.650000e-38 171.0
17 TraesCS6B01G299100 chr3A 85.000 100 13 2 5157 5255 573980254 573980156 4.860000e-17 100.0
18 TraesCS6B01G299100 chr1B 87.156 109 10 4 2508 2615 572529352 572529457 3.730000e-23 121.0
19 TraesCS6B01G299100 chr7A 88.235 102 8 4 2515 2615 61816018 61815920 1.340000e-22 119.0
20 TraesCS6B01G299100 chr7D 86.087 115 9 7 2507 2619 370726190 370726299 4.820000e-22 117.0
21 TraesCS6B01G299100 chr5D 87.037 108 9 5 2510 2616 205794746 205794643 4.820000e-22 117.0
22 TraesCS6B01G299100 chr4D 87.500 104 9 4 2515 2617 375135018 375134918 4.820000e-22 117.0
23 TraesCS6B01G299100 chr4D 87.255 102 9 4 2515 2615 205963442 205963540 6.240000e-21 113.0
24 TraesCS6B01G299100 chr5B 83.871 124 11 8 2515 2634 693583802 693583920 8.070000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G299100 chr6B 536841344 536848948 7604 True 14044.000000 14044 100.00000 1 7605 1 chr6B.!!$R1 7604
1 TraesCS6B01G299100 chr6A 498586963 498594353 7390 True 2543.000000 3685 91.04925 225 7605 4 chr6A.!!$R1 7380
2 TraesCS6B01G299100 chr6D 355870003 355880504 10501 True 1777.016667 3290 93.18950 209 7605 6 chr6D.!!$R1 7396

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
207 208 0.165944 CGCGTTGAAGTTGGCCTAAG 59.834 55.0 3.32 0.0 0.00 2.18 F
1279 4328 0.110486 GGGAGGACAAGAACAAGGCA 59.890 55.0 0.00 0.0 0.00 4.75 F
1950 4999 0.034186 CCAAGCCATCCAAGCCAGTA 60.034 55.0 0.00 0.0 0.00 2.74 F
2609 5658 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.0 0.00 0.0 0.00 4.20 F
3894 6944 2.158219 TCAGGGGTTACTCCAGTCTTCA 60.158 50.0 3.28 0.0 38.11 3.02 F
5530 8946 0.171007 CCAACCAGTAATGCCTTGCG 59.829 55.0 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1605 4654 0.955428 GCTCACGCTGGAAATGGTCA 60.955 55.000 0.00 0.0 0.00 4.02 R
2734 5784 0.104120 TTCACGCCACTCCGATATGG 59.896 55.000 0.00 0.0 39.16 2.74 R
3286 6336 3.549827 CCAACTCGCACAATGTTTAAGCA 60.550 43.478 0.00 0.0 0.00 3.91 R
3997 7047 1.068588 TCAGTCTTGAACACTGACCCG 59.931 52.381 0.00 0.0 44.33 5.28 R
5582 9005 0.177141 AGTGCATTGCATTCATGGCC 59.823 50.000 15.49 0.0 41.91 5.36 R
7125 10552 0.863144 GAAACGCGCCTGTAACTTGA 59.137 50.000 5.73 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 8.574196 AAACATATATTTTGTTCTAATGCGGC 57.426 30.769 0.00 0.00 36.32 6.53
42 43 7.510549 ACATATATTTTGTTCTAATGCGGCT 57.489 32.000 0.00 0.00 0.00 5.52
43 44 7.940850 ACATATATTTTGTTCTAATGCGGCTT 58.059 30.769 0.00 0.00 0.00 4.35
44 45 8.413229 ACATATATTTTGTTCTAATGCGGCTTT 58.587 29.630 0.00 3.69 0.00 3.51
45 46 8.693504 CATATATTTTGTTCTAATGCGGCTTTG 58.306 33.333 10.98 2.45 0.00 2.77
46 47 4.314740 TTTTGTTCTAATGCGGCTTTGT 57.685 36.364 10.98 0.00 0.00 2.83
47 48 5.440234 TTTTGTTCTAATGCGGCTTTGTA 57.560 34.783 10.98 0.00 0.00 2.41
48 49 4.413495 TTGTTCTAATGCGGCTTTGTAC 57.587 40.909 10.98 6.90 0.00 2.90
49 50 3.670625 TGTTCTAATGCGGCTTTGTACT 58.329 40.909 10.98 0.00 0.00 2.73
50 51 4.823157 TGTTCTAATGCGGCTTTGTACTA 58.177 39.130 10.98 0.00 0.00 1.82
51 52 5.424757 TGTTCTAATGCGGCTTTGTACTAT 58.575 37.500 10.98 0.00 0.00 2.12
52 53 5.522460 TGTTCTAATGCGGCTTTGTACTATC 59.478 40.000 10.98 0.00 0.00 2.08
53 54 5.270893 TCTAATGCGGCTTTGTACTATCA 57.729 39.130 10.98 0.00 0.00 2.15
54 55 5.666462 TCTAATGCGGCTTTGTACTATCAA 58.334 37.500 10.98 0.00 0.00 2.57
55 56 6.110033 TCTAATGCGGCTTTGTACTATCAAA 58.890 36.000 10.98 0.00 36.18 2.69
56 57 5.835113 AATGCGGCTTTGTACTATCAAAT 57.165 34.783 0.00 0.00 36.83 2.32
57 58 5.835113 ATGCGGCTTTGTACTATCAAATT 57.165 34.783 0.00 0.00 36.83 1.82
58 59 6.935741 ATGCGGCTTTGTACTATCAAATTA 57.064 33.333 0.00 0.00 36.83 1.40
59 60 6.745159 TGCGGCTTTGTACTATCAAATTAA 57.255 33.333 0.00 0.00 36.83 1.40
60 61 7.147143 TGCGGCTTTGTACTATCAAATTAAA 57.853 32.000 0.00 0.00 36.83 1.52
61 62 7.594714 TGCGGCTTTGTACTATCAAATTAAAA 58.405 30.769 0.00 0.00 36.83 1.52
62 63 8.247562 TGCGGCTTTGTACTATCAAATTAAAAT 58.752 29.630 0.00 0.00 36.83 1.82
63 64 8.531530 GCGGCTTTGTACTATCAAATTAAAATG 58.468 33.333 0.00 0.00 36.83 2.32
64 65 9.567848 CGGCTTTGTACTATCAAATTAAAATGT 57.432 29.630 0.00 0.00 36.83 2.71
94 95 8.996651 ATATATTTCTAAACCCTGAACCCTTG 57.003 34.615 0.00 0.00 0.00 3.61
95 96 4.799715 TTTCTAAACCCTGAACCCTTGA 57.200 40.909 0.00 0.00 0.00 3.02
96 97 4.799715 TTCTAAACCCTGAACCCTTGAA 57.200 40.909 0.00 0.00 0.00 2.69
97 98 5.333566 TTCTAAACCCTGAACCCTTGAAT 57.666 39.130 0.00 0.00 0.00 2.57
98 99 4.918588 TCTAAACCCTGAACCCTTGAATC 58.081 43.478 0.00 0.00 0.00 2.52
99 100 3.611025 AAACCCTGAACCCTTGAATCA 57.389 42.857 0.00 0.00 0.00 2.57
100 101 3.833559 AACCCTGAACCCTTGAATCAT 57.166 42.857 0.00 0.00 0.00 2.45
101 102 4.946160 AACCCTGAACCCTTGAATCATA 57.054 40.909 0.00 0.00 0.00 2.15
102 103 4.510167 ACCCTGAACCCTTGAATCATAG 57.490 45.455 0.00 0.00 0.00 2.23
103 104 4.111577 ACCCTGAACCCTTGAATCATAGA 58.888 43.478 0.00 0.00 0.00 1.98
104 105 4.728860 ACCCTGAACCCTTGAATCATAGAT 59.271 41.667 0.00 0.00 0.00 1.98
105 106 5.911178 ACCCTGAACCCTTGAATCATAGATA 59.089 40.000 0.00 0.00 0.00 1.98
106 107 6.564152 ACCCTGAACCCTTGAATCATAGATAT 59.436 38.462 0.00 0.00 0.00 1.63
107 108 7.074237 ACCCTGAACCCTTGAATCATAGATATT 59.926 37.037 0.00 0.00 0.00 1.28
108 109 7.946776 CCCTGAACCCTTGAATCATAGATATTT 59.053 37.037 0.00 0.00 0.00 1.40
109 110 8.790718 CCTGAACCCTTGAATCATAGATATTTG 58.209 37.037 0.00 0.00 0.00 2.32
110 111 9.347240 CTGAACCCTTGAATCATAGATATTTGT 57.653 33.333 0.00 0.00 0.00 2.83
111 112 9.699410 TGAACCCTTGAATCATAGATATTTGTT 57.301 29.630 0.00 0.00 0.00 2.83
119 120 9.882996 TGAATCATAGATATTTGTTTTCATCGC 57.117 29.630 0.00 0.00 0.00 4.58
120 121 8.939586 AATCATAGATATTTGTTTTCATCGCG 57.060 30.769 0.00 0.00 0.00 5.87
121 122 7.707774 TCATAGATATTTGTTTTCATCGCGA 57.292 32.000 13.09 13.09 0.00 5.87
122 123 7.787084 TCATAGATATTTGTTTTCATCGCGAG 58.213 34.615 16.66 7.11 0.00 5.03
123 124 4.837567 AGATATTTGTTTTCATCGCGAGC 58.162 39.130 16.66 0.85 0.00 5.03
124 125 2.987413 ATTTGTTTTCATCGCGAGCA 57.013 40.000 16.66 0.00 0.00 4.26
125 126 2.987413 TTTGTTTTCATCGCGAGCAT 57.013 40.000 16.66 0.00 0.00 3.79
126 127 2.245795 TTGTTTTCATCGCGAGCATG 57.754 45.000 16.66 8.60 0.00 4.06
127 128 0.447406 TGTTTTCATCGCGAGCATGG 59.553 50.000 16.66 1.37 0.00 3.66
128 129 0.726827 GTTTTCATCGCGAGCATGGA 59.273 50.000 16.66 0.00 0.00 3.41
129 130 1.331756 GTTTTCATCGCGAGCATGGAT 59.668 47.619 16.66 0.00 0.00 3.41
130 131 1.667236 TTTCATCGCGAGCATGGATT 58.333 45.000 16.66 0.00 0.00 3.01
131 132 1.667236 TTCATCGCGAGCATGGATTT 58.333 45.000 16.66 0.00 0.00 2.17
132 133 2.524569 TCATCGCGAGCATGGATTTA 57.475 45.000 16.66 0.00 0.00 1.40
133 134 2.407090 TCATCGCGAGCATGGATTTAG 58.593 47.619 16.66 0.00 0.00 1.85
134 135 1.136141 CATCGCGAGCATGGATTTAGC 60.136 52.381 16.66 0.00 0.00 3.09
135 136 1.202568 CGCGAGCATGGATTTAGCG 59.797 57.895 0.00 0.00 40.14 4.26
136 137 1.490693 CGCGAGCATGGATTTAGCGT 61.491 55.000 0.00 0.00 41.04 5.07
137 138 1.497991 GCGAGCATGGATTTAGCGTA 58.502 50.000 0.00 0.00 0.00 4.42
138 139 1.192534 GCGAGCATGGATTTAGCGTAC 59.807 52.381 0.00 0.00 0.00 3.67
139 140 1.792949 CGAGCATGGATTTAGCGTACC 59.207 52.381 0.00 0.00 0.00 3.34
140 141 2.545952 CGAGCATGGATTTAGCGTACCT 60.546 50.000 0.00 0.00 0.00 3.08
141 142 3.060602 GAGCATGGATTTAGCGTACCTC 58.939 50.000 0.00 0.00 0.00 3.85
142 143 2.700897 AGCATGGATTTAGCGTACCTCT 59.299 45.455 0.00 0.00 0.00 3.69
143 144 2.802816 GCATGGATTTAGCGTACCTCTG 59.197 50.000 0.00 0.00 0.00 3.35
144 145 2.596904 TGGATTTAGCGTACCTCTGC 57.403 50.000 0.00 0.00 0.00 4.26
145 146 1.828595 TGGATTTAGCGTACCTCTGCA 59.171 47.619 0.00 0.00 0.00 4.41
146 147 2.202566 GGATTTAGCGTACCTCTGCAC 58.797 52.381 0.00 0.00 0.00 4.57
147 148 2.202566 GATTTAGCGTACCTCTGCACC 58.797 52.381 0.00 0.00 0.00 5.01
148 149 0.970640 TTTAGCGTACCTCTGCACCA 59.029 50.000 0.00 0.00 0.00 4.17
149 150 1.191535 TTAGCGTACCTCTGCACCAT 58.808 50.000 0.00 0.00 0.00 3.55
150 151 1.191535 TAGCGTACCTCTGCACCATT 58.808 50.000 0.00 0.00 0.00 3.16
151 152 0.324943 AGCGTACCTCTGCACCATTT 59.675 50.000 0.00 0.00 0.00 2.32
152 153 0.447801 GCGTACCTCTGCACCATTTG 59.552 55.000 0.00 0.00 0.00 2.32
153 154 1.086696 CGTACCTCTGCACCATTTGG 58.913 55.000 0.00 0.00 42.17 3.28
154 155 0.811281 GTACCTCTGCACCATTTGGC 59.189 55.000 0.00 0.00 39.32 4.52
155 156 0.676466 TACCTCTGCACCATTTGGCG 60.676 55.000 0.00 0.00 39.32 5.69
156 157 2.180017 CTCTGCACCATTTGGCGC 59.820 61.111 0.00 0.00 43.26 6.53
160 161 3.105157 GCACCATTTGGCGCAACG 61.105 61.111 10.83 0.00 42.55 4.10
161 162 2.430582 CACCATTTGGCGCAACGG 60.431 61.111 10.83 0.00 39.32 4.44
162 163 3.679738 ACCATTTGGCGCAACGGG 61.680 61.111 10.83 6.25 39.32 5.28
163 164 3.679738 CCATTTGGCGCAACGGGT 61.680 61.111 10.83 0.00 0.00 5.28
164 165 2.126502 CATTTGGCGCAACGGGTC 60.127 61.111 10.83 0.00 0.00 4.46
165 166 2.282180 ATTTGGCGCAACGGGTCT 60.282 55.556 10.83 0.00 0.00 3.85
166 167 1.003112 ATTTGGCGCAACGGGTCTA 60.003 52.632 10.83 0.00 0.00 2.59
167 168 1.303091 ATTTGGCGCAACGGGTCTAC 61.303 55.000 10.83 0.00 0.00 2.59
168 169 2.386064 TTTGGCGCAACGGGTCTACT 62.386 55.000 10.83 0.00 0.00 2.57
169 170 1.534336 TTGGCGCAACGGGTCTACTA 61.534 55.000 10.83 0.00 0.00 1.82
170 171 1.226888 GGCGCAACGGGTCTACTAG 60.227 63.158 10.83 0.00 0.00 2.57
171 172 1.660560 GGCGCAACGGGTCTACTAGA 61.661 60.000 10.83 0.00 0.00 2.43
172 173 0.525029 GCGCAACGGGTCTACTAGAC 60.525 60.000 0.30 7.60 44.32 2.59
173 174 0.806868 CGCAACGGGTCTACTAGACA 59.193 55.000 16.49 0.00 46.79 3.41
174 175 1.202154 CGCAACGGGTCTACTAGACAG 60.202 57.143 16.49 12.17 46.79 3.51
175 176 2.089980 GCAACGGGTCTACTAGACAGA 58.910 52.381 16.49 0.00 46.79 3.41
176 177 2.490903 GCAACGGGTCTACTAGACAGAA 59.509 50.000 16.49 0.00 46.79 3.02
177 178 3.130693 GCAACGGGTCTACTAGACAGAAT 59.869 47.826 16.49 4.29 46.79 2.40
178 179 4.673441 CAACGGGTCTACTAGACAGAATG 58.327 47.826 16.49 10.67 46.79 2.67
179 180 4.232188 ACGGGTCTACTAGACAGAATGA 57.768 45.455 16.49 0.00 46.79 2.57
180 181 3.946558 ACGGGTCTACTAGACAGAATGAC 59.053 47.826 16.49 0.00 46.79 3.06
181 182 3.002451 CGGGTCTACTAGACAGAATGACG 59.998 52.174 16.49 6.53 46.79 4.35
182 183 4.197750 GGGTCTACTAGACAGAATGACGA 58.802 47.826 16.49 0.00 46.79 4.20
183 184 4.639310 GGGTCTACTAGACAGAATGACGAA 59.361 45.833 16.49 0.00 46.79 3.85
184 185 5.448904 GGGTCTACTAGACAGAATGACGAAC 60.449 48.000 16.49 0.00 46.79 3.95
185 186 5.257108 GTCTACTAGACAGAATGACGAACG 58.743 45.833 10.85 0.00 44.45 3.95
186 187 3.489180 ACTAGACAGAATGACGAACGG 57.511 47.619 0.00 0.00 39.69 4.44
187 188 2.163815 ACTAGACAGAATGACGAACGGG 59.836 50.000 0.00 0.00 39.69 5.28
188 189 0.389948 AGACAGAATGACGAACGGGC 60.390 55.000 0.00 0.00 39.69 6.13
189 190 1.683790 GACAGAATGACGAACGGGCG 61.684 60.000 0.00 0.00 39.69 6.13
190 191 2.813908 AGAATGACGAACGGGCGC 60.814 61.111 0.00 0.00 33.86 6.53
191 192 4.204891 GAATGACGAACGGGCGCG 62.205 66.667 22.69 22.69 33.86 6.86
197 198 4.424430 CGAACGGGCGCGTTGAAG 62.424 66.667 40.70 27.41 31.71 3.02
198 199 3.343421 GAACGGGCGCGTTGAAGT 61.343 61.111 40.70 21.12 31.71 3.01
199 200 2.888998 GAACGGGCGCGTTGAAGTT 61.889 57.895 40.70 20.36 31.71 2.66
200 201 3.175976 AACGGGCGCGTTGAAGTTG 62.176 57.895 36.30 2.79 0.00 3.16
201 202 4.383602 CGGGCGCGTTGAAGTTGG 62.384 66.667 15.94 0.00 0.00 3.77
202 203 4.700365 GGGCGCGTTGAAGTTGGC 62.700 66.667 8.43 0.00 0.00 4.52
203 204 4.700365 GGCGCGTTGAAGTTGGCC 62.700 66.667 8.43 0.00 0.00 5.36
204 205 3.660111 GCGCGTTGAAGTTGGCCT 61.660 61.111 8.43 0.00 0.00 5.19
205 206 2.322081 GCGCGTTGAAGTTGGCCTA 61.322 57.895 8.43 0.00 0.00 3.93
206 207 1.847890 GCGCGTTGAAGTTGGCCTAA 61.848 55.000 8.43 0.00 0.00 2.69
207 208 0.165944 CGCGTTGAAGTTGGCCTAAG 59.834 55.000 3.32 0.00 0.00 2.18
346 355 3.022287 CAGCCTCGCAAACGTGTT 58.978 55.556 0.00 0.00 41.18 3.32
362 371 2.356135 GTGTTATCGCCACAAGTCCAT 58.644 47.619 0.00 0.00 33.00 3.41
367 376 0.535335 TCGCCACAAGTCCATAGTCC 59.465 55.000 0.00 0.00 0.00 3.85
379 388 3.144120 ATAGTCCAGAGCAGCGCGG 62.144 63.158 8.83 2.11 0.00 6.46
395 405 3.001514 GGGAGATTCTGCCTGCCA 58.998 61.111 16.39 0.00 41.19 4.92
449 459 1.225426 CTCTAATGCCTGCCAGCCA 59.775 57.895 0.00 0.00 0.00 4.75
922 3965 3.403558 GCCCCTCGCTTCCTTCCT 61.404 66.667 0.00 0.00 0.00 3.36
1086 4135 0.388263 GGAGAAGGGTCACGTTCGTC 60.388 60.000 0.00 0.00 44.10 4.20
1190 4239 2.280524 CACGCCGTTGAGTCCCAA 60.281 61.111 0.00 0.00 0.00 4.12
1266 4315 3.336568 AGGACGGTCGAGGGAGGA 61.337 66.667 1.43 0.00 0.00 3.71
1279 4328 0.110486 GGGAGGACAAGAACAAGGCA 59.890 55.000 0.00 0.00 0.00 4.75
1605 4654 0.538746 CGCACTACCCCACCCTTTTT 60.539 55.000 0.00 0.00 0.00 1.94
1667 4716 0.107312 CAGAACCAGGGGCTCATCTG 60.107 60.000 0.00 0.00 0.00 2.90
1950 4999 0.034186 CCAAGCCATCCAAGCCAGTA 60.034 55.000 0.00 0.00 0.00 2.74
2146 5195 5.843969 TCTGTTATCCCTGCATGTAGGATTA 59.156 40.000 29.44 17.20 40.83 1.75
2170 5219 7.272144 AGGAGGTCTACATTTGGTTCTATTT 57.728 36.000 0.00 0.00 0.00 1.40
2305 5354 6.520913 GCTTTCTTTATAATCTCGGGGAGGAT 60.521 42.308 0.00 0.00 0.00 3.24
2451 5500 9.316730 GGTATTCAAATTATGCACATGAACATT 57.683 29.630 0.00 0.00 33.29 2.71
2454 5503 8.828688 TTCAAATTATGCACATGAACATTGAA 57.171 26.923 0.00 7.30 0.00 2.69
2455 5504 9.438228 TTCAAATTATGCACATGAACATTGAAT 57.562 25.926 0.00 0.00 0.00 2.57
2456 5505 9.089601 TCAAATTATGCACATGAACATTGAATC 57.910 29.630 0.00 0.00 0.00 2.52
2457 5506 9.093970 CAAATTATGCACATGAACATTGAATCT 57.906 29.630 0.00 0.00 0.00 2.40
2458 5507 9.661563 AAATTATGCACATGAACATTGAATCTT 57.338 25.926 0.00 0.00 0.00 2.40
2459 5508 8.642908 ATTATGCACATGAACATTGAATCTTG 57.357 30.769 0.00 0.37 0.00 3.02
2460 5509 5.456548 TGCACATGAACATTGAATCTTGT 57.543 34.783 0.00 0.96 35.17 3.16
2461 5510 5.463286 TGCACATGAACATTGAATCTTGTC 58.537 37.500 0.00 8.05 33.27 3.18
2462 5511 5.009811 TGCACATGAACATTGAATCTTGTCA 59.990 36.000 0.00 9.55 33.27 3.58
2463 5512 5.571741 GCACATGAACATTGAATCTTGTCAG 59.428 40.000 0.00 5.36 33.27 3.51
2464 5513 6.090783 CACATGAACATTGAATCTTGTCAGG 58.909 40.000 0.00 0.00 33.27 3.86
2465 5514 6.005823 ACATGAACATTGAATCTTGTCAGGA 58.994 36.000 0.00 0.00 30.72 3.86
2466 5515 6.491062 ACATGAACATTGAATCTTGTCAGGAA 59.509 34.615 0.00 0.00 30.72 3.36
2467 5516 7.177921 ACATGAACATTGAATCTTGTCAGGAAT 59.822 33.333 0.00 0.00 30.72 3.01
2468 5517 7.528996 TGAACATTGAATCTTGTCAGGAATT 57.471 32.000 0.00 0.00 0.00 2.17
2469 5518 8.634335 TGAACATTGAATCTTGTCAGGAATTA 57.366 30.769 0.00 0.00 0.00 1.40
2470 5519 9.076781 TGAACATTGAATCTTGTCAGGAATTAA 57.923 29.630 0.00 0.00 0.00 1.40
2471 5520 9.565213 GAACATTGAATCTTGTCAGGAATTAAG 57.435 33.333 0.00 0.00 0.00 1.85
2472 5521 8.059798 ACATTGAATCTTGTCAGGAATTAAGG 57.940 34.615 0.00 0.00 0.00 2.69
2473 5522 7.123247 ACATTGAATCTTGTCAGGAATTAAGGG 59.877 37.037 0.00 0.00 0.00 3.95
2474 5523 6.139679 TGAATCTTGTCAGGAATTAAGGGT 57.860 37.500 0.00 0.00 0.00 4.34
2475 5524 6.180472 TGAATCTTGTCAGGAATTAAGGGTC 58.820 40.000 0.00 0.00 0.00 4.46
2476 5525 6.012508 TGAATCTTGTCAGGAATTAAGGGTCT 60.013 38.462 0.00 0.00 0.00 3.85
2477 5526 5.165961 TCTTGTCAGGAATTAAGGGTCTG 57.834 43.478 0.00 0.00 0.00 3.51
2478 5527 4.844085 TCTTGTCAGGAATTAAGGGTCTGA 59.156 41.667 0.00 0.00 32.79 3.27
2479 5528 5.309543 TCTTGTCAGGAATTAAGGGTCTGAA 59.690 40.000 0.00 0.00 36.42 3.02
2480 5529 5.576563 TGTCAGGAATTAAGGGTCTGAAA 57.423 39.130 0.00 0.00 36.42 2.69
2481 5530 6.139679 TGTCAGGAATTAAGGGTCTGAAAT 57.860 37.500 0.00 0.00 36.42 2.17
2482 5531 6.552008 TGTCAGGAATTAAGGGTCTGAAATT 58.448 36.000 0.00 0.00 36.42 1.82
2483 5532 6.659242 TGTCAGGAATTAAGGGTCTGAAATTC 59.341 38.462 0.00 4.07 36.42 2.17
2487 5536 6.887002 AGGAATTAAGGGTCTGAAATTCTGAC 59.113 38.462 20.26 20.26 42.38 3.51
2501 5550 3.297134 TTCTGACTGGTTGGCTTCTTT 57.703 42.857 0.00 0.00 0.00 2.52
2511 5560 4.527816 TGGTTGGCTTCTTTCAGCATATTT 59.472 37.500 0.00 0.00 42.10 1.40
2512 5561 5.714333 TGGTTGGCTTCTTTCAGCATATTTA 59.286 36.000 0.00 0.00 42.10 1.40
2513 5562 6.036470 GGTTGGCTTCTTTCAGCATATTTAC 58.964 40.000 0.00 0.00 42.10 2.01
2514 5563 6.127619 GGTTGGCTTCTTTCAGCATATTTACT 60.128 38.462 0.00 0.00 42.10 2.24
2515 5564 7.067008 GGTTGGCTTCTTTCAGCATATTTACTA 59.933 37.037 0.00 0.00 42.10 1.82
2516 5565 7.553881 TGGCTTCTTTCAGCATATTTACTAC 57.446 36.000 0.00 0.00 42.10 2.73
2517 5566 7.338710 TGGCTTCTTTCAGCATATTTACTACT 58.661 34.615 0.00 0.00 42.10 2.57
2518 5567 7.495934 TGGCTTCTTTCAGCATATTTACTACTC 59.504 37.037 0.00 0.00 42.10 2.59
2519 5568 7.041712 GGCTTCTTTCAGCATATTTACTACTCC 60.042 40.741 0.00 0.00 42.10 3.85
2520 5569 7.041712 GCTTCTTTCAGCATATTTACTACTCCC 60.042 40.741 0.00 0.00 39.83 4.30
2521 5570 7.676683 TCTTTCAGCATATTTACTACTCCCT 57.323 36.000 0.00 0.00 0.00 4.20
2522 5571 7.727181 TCTTTCAGCATATTTACTACTCCCTC 58.273 38.462 0.00 0.00 0.00 4.30
2523 5572 7.565398 TCTTTCAGCATATTTACTACTCCCTCT 59.435 37.037 0.00 0.00 0.00 3.69
2524 5573 6.656632 TCAGCATATTTACTACTCCCTCTG 57.343 41.667 0.00 0.00 0.00 3.35
2525 5574 6.136857 TCAGCATATTTACTACTCCCTCTGT 58.863 40.000 0.00 0.00 0.00 3.41
2526 5575 6.265649 TCAGCATATTTACTACTCCCTCTGTC 59.734 42.308 0.00 0.00 0.00 3.51
2527 5576 5.540719 AGCATATTTACTACTCCCTCTGTCC 59.459 44.000 0.00 0.00 0.00 4.02
2528 5577 5.279556 GCATATTTACTACTCCCTCTGTCCC 60.280 48.000 0.00 0.00 0.00 4.46
2529 5578 3.839323 TTTACTACTCCCTCTGTCCCA 57.161 47.619 0.00 0.00 0.00 4.37
2530 5579 3.839323 TTACTACTCCCTCTGTCCCAA 57.161 47.619 0.00 0.00 0.00 4.12
2531 5580 2.715763 ACTACTCCCTCTGTCCCAAA 57.284 50.000 0.00 0.00 0.00 3.28
2532 5581 2.986050 ACTACTCCCTCTGTCCCAAAA 58.014 47.619 0.00 0.00 0.00 2.44
2533 5582 3.532102 ACTACTCCCTCTGTCCCAAAAT 58.468 45.455 0.00 0.00 0.00 1.82
2534 5583 4.695606 ACTACTCCCTCTGTCCCAAAATA 58.304 43.478 0.00 0.00 0.00 1.40
2535 5584 5.098663 ACTACTCCCTCTGTCCCAAAATAA 58.901 41.667 0.00 0.00 0.00 1.40
2536 5585 4.302559 ACTCCCTCTGTCCCAAAATAAC 57.697 45.455 0.00 0.00 0.00 1.89
2537 5586 3.916989 ACTCCCTCTGTCCCAAAATAACT 59.083 43.478 0.00 0.00 0.00 2.24
2538 5587 4.263506 ACTCCCTCTGTCCCAAAATAACTG 60.264 45.833 0.00 0.00 0.00 3.16
2539 5588 3.655777 TCCCTCTGTCCCAAAATAACTGT 59.344 43.478 0.00 0.00 0.00 3.55
2540 5589 4.010349 CCCTCTGTCCCAAAATAACTGTC 58.990 47.826 0.00 0.00 0.00 3.51
2541 5590 4.263506 CCCTCTGTCCCAAAATAACTGTCT 60.264 45.833 0.00 0.00 0.00 3.41
2542 5591 4.938226 CCTCTGTCCCAAAATAACTGTCTC 59.062 45.833 0.00 0.00 0.00 3.36
2543 5592 5.513094 CCTCTGTCCCAAAATAACTGTCTCA 60.513 44.000 0.00 0.00 0.00 3.27
2544 5593 5.935945 TCTGTCCCAAAATAACTGTCTCAA 58.064 37.500 0.00 0.00 0.00 3.02
2545 5594 5.763204 TCTGTCCCAAAATAACTGTCTCAAC 59.237 40.000 0.00 0.00 0.00 3.18
2546 5595 5.690865 TGTCCCAAAATAACTGTCTCAACT 58.309 37.500 0.00 0.00 0.00 3.16
2547 5596 6.126409 TGTCCCAAAATAACTGTCTCAACTT 58.874 36.000 0.00 0.00 0.00 2.66
2548 5597 6.605594 TGTCCCAAAATAACTGTCTCAACTTT 59.394 34.615 0.00 0.00 0.00 2.66
2549 5598 7.776030 TGTCCCAAAATAACTGTCTCAACTTTA 59.224 33.333 0.00 0.00 0.00 1.85
2550 5599 8.290325 GTCCCAAAATAACTGTCTCAACTTTAG 58.710 37.037 0.00 0.00 0.00 1.85
2551 5600 7.996644 TCCCAAAATAACTGTCTCAACTTTAGT 59.003 33.333 0.00 0.00 0.00 2.24
2552 5601 9.280174 CCCAAAATAACTGTCTCAACTTTAGTA 57.720 33.333 0.00 0.00 0.00 1.82
2566 5615 9.893305 CTCAACTTTAGTACAACTTATTTTGGG 57.107 33.333 0.00 0.00 0.00 4.12
2567 5616 9.629878 TCAACTTTAGTACAACTTATTTTGGGA 57.370 29.630 0.00 0.00 0.00 4.37
2579 5628 8.528044 AACTTATTTTGGGAAAGTTGTACTGA 57.472 30.769 0.00 0.00 40.85 3.41
2580 5629 8.528044 ACTTATTTTGGGAAAGTTGTACTGAA 57.472 30.769 0.00 0.00 29.25 3.02
2581 5630 8.630037 ACTTATTTTGGGAAAGTTGTACTGAAG 58.370 33.333 0.00 0.00 29.25 3.02
2582 5631 8.528044 TTATTTTGGGAAAGTTGTACTGAAGT 57.472 30.769 0.00 0.00 0.00 3.01
2583 5632 6.844097 TTTTGGGAAAGTTGTACTGAAGTT 57.156 33.333 0.00 0.00 0.00 2.66
2584 5633 5.828299 TTGGGAAAGTTGTACTGAAGTTG 57.172 39.130 0.00 0.00 0.00 3.16
2585 5634 5.105567 TGGGAAAGTTGTACTGAAGTTGA 57.894 39.130 0.00 0.00 0.00 3.18
2586 5635 5.502079 TGGGAAAGTTGTACTGAAGTTGAA 58.498 37.500 0.00 0.00 0.00 2.69
2587 5636 5.946972 TGGGAAAGTTGTACTGAAGTTGAAA 59.053 36.000 0.00 0.00 0.00 2.69
2588 5637 6.127842 TGGGAAAGTTGTACTGAAGTTGAAAC 60.128 38.462 0.00 0.00 0.00 2.78
2589 5638 6.127842 GGGAAAGTTGTACTGAAGTTGAAACA 60.128 38.462 0.00 0.00 0.00 2.83
2590 5639 6.745907 GGAAAGTTGTACTGAAGTTGAAACAC 59.254 38.462 0.00 0.00 0.00 3.32
2591 5640 7.361799 GGAAAGTTGTACTGAAGTTGAAACACT 60.362 37.037 0.00 0.00 0.00 3.55
2592 5641 7.448748 AAGTTGTACTGAAGTTGAAACACTT 57.551 32.000 0.00 0.00 39.84 3.16
2593 5642 8.556213 AAGTTGTACTGAAGTTGAAACACTTA 57.444 30.769 0.00 0.00 37.11 2.24
2594 5643 8.732746 AGTTGTACTGAAGTTGAAACACTTAT 57.267 30.769 0.00 0.00 37.11 1.73
2595 5644 9.174166 AGTTGTACTGAAGTTGAAACACTTATT 57.826 29.630 0.00 0.00 37.11 1.40
2596 5645 9.783256 GTTGTACTGAAGTTGAAACACTTATTT 57.217 29.630 0.00 0.00 37.11 1.40
2598 5647 9.781834 TGTACTGAAGTTGAAACACTTATTTTG 57.218 29.630 0.00 0.00 37.11 2.44
2599 5648 9.233232 GTACTGAAGTTGAAACACTTATTTTGG 57.767 33.333 0.00 0.00 37.11 3.28
2600 5649 7.264947 ACTGAAGTTGAAACACTTATTTTGGG 58.735 34.615 0.00 0.00 37.11 4.12
2601 5650 7.123547 ACTGAAGTTGAAACACTTATTTTGGGA 59.876 33.333 0.00 0.00 37.11 4.37
2602 5651 7.262048 TGAAGTTGAAACACTTATTTTGGGAC 58.738 34.615 0.00 0.00 37.11 4.46
2603 5652 5.827666 AGTTGAAACACTTATTTTGGGACG 58.172 37.500 0.00 0.00 0.00 4.79
2604 5653 4.839668 TGAAACACTTATTTTGGGACGG 57.160 40.909 0.00 0.00 0.00 4.79
2605 5654 4.462133 TGAAACACTTATTTTGGGACGGA 58.538 39.130 0.00 0.00 0.00 4.69
2606 5655 4.517453 TGAAACACTTATTTTGGGACGGAG 59.483 41.667 0.00 0.00 0.00 4.63
2607 5656 3.067684 ACACTTATTTTGGGACGGAGG 57.932 47.619 0.00 0.00 0.00 4.30
2608 5657 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
2609 5658 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
2610 5659 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
2639 5688 3.181476 GCTTTCTGAAACTTCCTTGCCAA 60.181 43.478 0.00 0.00 0.00 4.52
2807 5857 6.796426 AGCCTTAAAGAAAGAACAGTGAAAC 58.204 36.000 0.00 0.00 37.38 2.78
2830 5880 2.494471 GGGGTTCCCGTTTCTTTTATGG 59.506 50.000 1.48 0.00 32.13 2.74
3276 6326 6.370442 CAGTCGATAACATGGTTGAAAGGTTA 59.630 38.462 0.00 0.00 0.00 2.85
3286 6336 7.287696 ACATGGTTGAAAGGTTATCAAGAACTT 59.712 33.333 0.00 0.00 37.46 2.66
3894 6944 2.158219 TCAGGGGTTACTCCAGTCTTCA 60.158 50.000 3.28 0.00 38.11 3.02
3900 6950 3.927142 GGTTACTCCAGTCTTCACATTCG 59.073 47.826 0.00 0.00 35.97 3.34
3949 6999 8.915036 ACTCTCCAGTTGTAAAGGTATACATAG 58.085 37.037 5.01 0.00 35.80 2.23
3997 7047 6.449635 TTGCATGGTATGTCTATGTTTTCC 57.550 37.500 0.00 0.00 37.35 3.13
4011 7061 2.018515 GTTTTCCGGGTCAGTGTTCAA 58.981 47.619 0.00 0.00 0.00 2.69
4035 7086 3.201290 CTGAACTGACTATCATGTGGGC 58.799 50.000 0.00 0.00 0.00 5.36
4042 7093 4.454678 TGACTATCATGTGGGCAATCTTC 58.545 43.478 0.00 0.00 0.00 2.87
4046 7097 4.785346 ATCATGTGGGCAATCTTCTACT 57.215 40.909 0.00 0.00 0.00 2.57
4047 7098 4.574674 TCATGTGGGCAATCTTCTACTT 57.425 40.909 0.00 0.00 0.00 2.24
4052 7103 7.450014 TCATGTGGGCAATCTTCTACTTAAAAA 59.550 33.333 0.00 0.00 0.00 1.94
4104 7158 7.118971 GTCTAATTGCAAAGTTCAGATCAGACT 59.881 37.037 1.71 0.00 0.00 3.24
4125 7179 8.971073 CAGACTTCATTGAATAAATTTACCCCT 58.029 33.333 0.00 0.00 0.00 4.79
4132 7186 7.762588 TTGAATAAATTTACCCCTTGTTCGA 57.237 32.000 0.00 0.00 0.00 3.71
4206 7260 5.998553 GGTTCACTACCTTTTTAAGAGTGC 58.001 41.667 0.00 0.00 44.10 4.40
4225 7281 1.597663 GCAACTTTGTCGCACTGTAGT 59.402 47.619 0.00 0.00 0.00 2.73
4235 7291 4.142665 TGTCGCACTGTAGTTGTAGATCTC 60.143 45.833 0.00 0.00 0.00 2.75
4236 7292 3.063588 TCGCACTGTAGTTGTAGATCTCG 59.936 47.826 0.00 0.00 0.00 4.04
4264 7320 7.584122 TTATAGCAAGTCTCGGAAAGTAGAT 57.416 36.000 0.00 0.00 0.00 1.98
4265 7321 8.687292 TTATAGCAAGTCTCGGAAAGTAGATA 57.313 34.615 0.00 0.00 0.00 1.98
4266 7322 5.251601 AGCAAGTCTCGGAAAGTAGATAC 57.748 43.478 0.00 0.00 0.00 2.24
4348 7422 8.696410 TTTCACCTCAGTTTTTAAACATGTTC 57.304 30.769 12.39 0.00 41.30 3.18
4352 7426 8.755018 CACCTCAGTTTTTAAACATGTTCATTC 58.245 33.333 12.39 1.43 41.30 2.67
4374 7448 6.500684 TCCAACTGAAGCACATTTTAGATC 57.499 37.500 0.00 0.00 0.00 2.75
4382 7456 7.485810 TGAAGCACATTTTAGATCCATCATTG 58.514 34.615 0.00 0.00 0.00 2.82
4388 7462 7.713507 CACATTTTAGATCCATCATTGGCATTT 59.286 33.333 0.00 0.00 43.29 2.32
4424 7506 8.590204 TGTCTTAAGGTATCATGTGTTTACTGA 58.410 33.333 1.85 0.00 0.00 3.41
4431 7513 6.697892 GGTATCATGTGTTTACTGAGCTAGTC 59.302 42.308 0.00 0.00 40.89 2.59
4433 7515 5.955488 TCATGTGTTTACTGAGCTAGTCTC 58.045 41.667 7.10 7.10 40.89 3.36
4592 7741 5.419542 TCAACTTGGAGGATAAGAACATCG 58.580 41.667 0.00 0.00 0.00 3.84
4612 7761 9.930693 AACATCGTATTCTCTCTTTTAGAAACT 57.069 29.630 0.00 0.00 36.60 2.66
4643 7792 9.537192 TGATACAGTATTAAATTTCACCCTACG 57.463 33.333 0.00 0.00 0.00 3.51
4652 7801 9.729281 ATTAAATTTCACCCTACGTTTCTAAGA 57.271 29.630 0.00 0.00 0.00 2.10
4668 7817 7.576856 CGTTTCTAAGAAAATTTGGCCATACCT 60.577 37.037 6.09 0.00 40.22 3.08
4701 7850 4.094887 CCTTATTGAAATGGTCACGTCCAG 59.905 45.833 2.16 0.00 41.05 3.86
4710 7859 0.669077 GTCACGTCCAGTCAGTCACT 59.331 55.000 0.00 0.00 34.67 3.41
4712 7861 2.095668 GTCACGTCCAGTCAGTCACTAG 60.096 54.545 0.00 0.00 32.21 2.57
4745 7894 0.320421 GAACCGCCAGCACTGACTTA 60.320 55.000 0.00 0.00 0.00 2.24
4747 7896 0.324943 ACCGCCAGCACTGACTTATT 59.675 50.000 0.00 0.00 0.00 1.40
4756 7905 6.749118 GCCAGCACTGACTTATTATTTCTTTG 59.251 38.462 0.00 0.00 0.00 2.77
4798 8072 1.134220 GCCCGGGTTTCACTATCATCA 60.134 52.381 24.63 0.00 0.00 3.07
4810 8084 9.383519 GTTTCACTATCATCAGATAAAGGAACA 57.616 33.333 0.00 0.00 36.35 3.18
4837 8111 8.871629 ATATCCAACAGTACCAACAATACAAA 57.128 30.769 0.00 0.00 0.00 2.83
4842 8116 7.012515 CCAACAGTACCAACAATACAAACACTA 59.987 37.037 0.00 0.00 0.00 2.74
4844 8118 8.149973 ACAGTACCAACAATACAAACACTAAG 57.850 34.615 0.00 0.00 0.00 2.18
4852 8126 7.246674 ACAATACAAACACTAAGTGACACAG 57.753 36.000 8.59 0.00 36.96 3.66
4853 8127 6.821665 ACAATACAAACACTAAGTGACACAGT 59.178 34.615 8.59 0.19 36.96 3.55
4893 8167 8.574196 GCATAAAACTGCAAAGAGTTTCTTTA 57.426 30.769 3.93 0.00 44.23 1.85
4961 8235 4.163078 ACAGTATCAAGGCAAGAGTAGCAT 59.837 41.667 0.00 0.00 0.00 3.79
4971 8245 0.757188 AGAGTAGCATCGTGGGAGGG 60.757 60.000 0.00 0.00 0.00 4.30
4975 8249 4.176752 GCATCGTGGGAGGGGTCC 62.177 72.222 0.00 0.00 0.00 4.46
4979 8253 3.797353 CGTGGGAGGGGTCCATGG 61.797 72.222 4.97 4.97 37.58 3.66
5052 8347 8.383175 AGTCCAATTGTACAAGGAAAGATCTAA 58.617 33.333 15.99 0.00 0.00 2.10
5053 8348 8.669243 GTCCAATTGTACAAGGAAAGATCTAAG 58.331 37.037 15.99 0.00 0.00 2.18
5054 8349 8.383175 TCCAATTGTACAAGGAAAGATCTAAGT 58.617 33.333 14.65 0.00 0.00 2.24
5055 8350 8.669243 CCAATTGTACAAGGAAAGATCTAAGTC 58.331 37.037 14.65 0.00 0.00 3.01
5056 8351 9.442047 CAATTGTACAAGGAAAGATCTAAGTCT 57.558 33.333 14.65 0.00 0.00 3.24
5061 8356 9.453325 GTACAAGGAAAGATCTAAGTCTAATCG 57.547 37.037 0.00 0.00 0.00 3.34
5062 8357 8.068892 ACAAGGAAAGATCTAAGTCTAATCGT 57.931 34.615 0.00 0.00 0.00 3.73
5063 8358 9.186837 ACAAGGAAAGATCTAAGTCTAATCGTA 57.813 33.333 0.00 0.00 0.00 3.43
5081 8376 3.053095 TCGTATTAGGAGAGGTCAAGGGT 60.053 47.826 0.00 0.00 0.00 4.34
5091 8386 0.908198 GGTCAAGGGTCTGAGCATCT 59.092 55.000 9.30 0.00 42.23 2.90
5126 8421 3.007506 TGACATGTATCCACGTTTGAGGT 59.992 43.478 0.00 0.00 0.00 3.85
5154 8449 8.766476 AGGAAGAACAATCAATCTAATCTCTCA 58.234 33.333 0.00 0.00 0.00 3.27
5159 8454 9.160496 GAACAATCAATCTAATCTCTCACAGTT 57.840 33.333 0.00 0.00 0.00 3.16
5160 8455 8.715191 ACAATCAATCTAATCTCTCACAGTTC 57.285 34.615 0.00 0.00 0.00 3.01
5173 8468 4.691685 TCTCACAGTTCTTCTCTCGTCTAC 59.308 45.833 0.00 0.00 0.00 2.59
5174 8469 4.386711 TCACAGTTCTTCTCTCGTCTACA 58.613 43.478 0.00 0.00 0.00 2.74
5176 8471 3.502979 ACAGTTCTTCTCTCGTCTACACC 59.497 47.826 0.00 0.00 0.00 4.16
5177 8472 3.754323 CAGTTCTTCTCTCGTCTACACCT 59.246 47.826 0.00 0.00 0.00 4.00
5178 8473 4.936411 CAGTTCTTCTCTCGTCTACACCTA 59.064 45.833 0.00 0.00 0.00 3.08
5179 8474 5.587043 CAGTTCTTCTCTCGTCTACACCTAT 59.413 44.000 0.00 0.00 0.00 2.57
5180 8475 6.762187 CAGTTCTTCTCTCGTCTACACCTATA 59.238 42.308 0.00 0.00 0.00 1.31
5181 8476 7.442969 CAGTTCTTCTCTCGTCTACACCTATAT 59.557 40.741 0.00 0.00 0.00 0.86
5182 8477 7.442969 AGTTCTTCTCTCGTCTACACCTATATG 59.557 40.741 0.00 0.00 0.00 1.78
5194 8489 6.952358 TCTACACCTATATGTACTCAATCCCC 59.048 42.308 0.00 0.00 33.85 4.81
5225 8520 1.565305 CGTCTGGCTATCTTCAGCAC 58.435 55.000 0.00 0.00 43.67 4.40
5228 8523 1.153369 TGGCTATCTTCAGCACGGC 60.153 57.895 0.00 0.00 43.67 5.68
5244 8539 1.366111 CGGCAGTTATCCCGTTGTGG 61.366 60.000 0.00 0.00 39.67 4.17
5258 8553 2.616376 CGTTGTGGATCAAGGTTCACAA 59.384 45.455 3.07 3.07 44.57 3.33
5281 8576 4.096382 ACACGAAAGCACTCACTTTTCATT 59.904 37.500 0.00 0.00 39.93 2.57
5314 8715 9.347240 GGCCAATCATATATCTTATATGTTGCT 57.653 33.333 0.00 0.00 34.51 3.91
5332 8733 7.008440 TGTTGCTATGATCAATCTCTTTTCG 57.992 36.000 0.00 0.00 0.00 3.46
5333 8734 5.663795 TGCTATGATCAATCTCTTTTCGC 57.336 39.130 0.00 0.00 0.00 4.70
5334 8735 4.512944 TGCTATGATCAATCTCTTTTCGCC 59.487 41.667 0.00 0.00 0.00 5.54
5335 8736 4.512944 GCTATGATCAATCTCTTTTCGCCA 59.487 41.667 0.00 0.00 0.00 5.69
5336 8737 5.008019 GCTATGATCAATCTCTTTTCGCCAA 59.992 40.000 0.00 0.00 0.00 4.52
5337 8738 5.902613 ATGATCAATCTCTTTTCGCCAAA 57.097 34.783 0.00 0.00 0.00 3.28
5338 8739 5.902613 TGATCAATCTCTTTTCGCCAAAT 57.097 34.783 0.00 0.00 0.00 2.32
5339 8740 5.643664 TGATCAATCTCTTTTCGCCAAATG 58.356 37.500 0.00 0.00 0.00 2.32
5340 8741 3.836949 TCAATCTCTTTTCGCCAAATGC 58.163 40.909 0.00 0.00 0.00 3.56
5341 8742 3.255395 TCAATCTCTTTTCGCCAAATGCA 59.745 39.130 0.00 0.00 41.33 3.96
5342 8743 4.082081 TCAATCTCTTTTCGCCAAATGCAT 60.082 37.500 0.00 0.00 41.33 3.96
5344 8745 3.577667 TCTCTTTTCGCCAAATGCATTG 58.422 40.909 13.82 7.26 41.33 2.82
5369 8773 2.932614 CAAACAAGCTGGGATACTCTCG 59.067 50.000 0.00 0.00 0.00 4.04
5371 8775 1.751924 ACAAGCTGGGATACTCTCGAC 59.248 52.381 0.00 0.00 0.00 4.20
5385 8789 5.759506 ACTCTCGACCTCAATGTAGTATG 57.240 43.478 0.00 0.00 0.00 2.39
5397 8802 8.393366 CCTCAATGTAGTATGTCACAAAAGATG 58.607 37.037 0.00 0.00 0.00 2.90
5399 8804 9.154847 TCAATGTAGTATGTCACAAAAGATGAG 57.845 33.333 0.00 0.00 0.00 2.90
5418 8823 4.819769 TGAGCAATCCAACAAAATAAGGC 58.180 39.130 0.00 0.00 0.00 4.35
5422 8827 1.551452 TCCAACAAAATAAGGCGGGG 58.449 50.000 0.00 0.00 0.00 5.73
5436 8846 8.771521 AATAAGGCGGGGTAAATTTTTATACT 57.228 30.769 0.00 0.00 0.00 2.12
5456 8866 4.978099 ACTTCACATTTGATGGAGACTGT 58.022 39.130 0.48 0.00 32.34 3.55
5458 8868 5.471456 ACTTCACATTTGATGGAGACTGTTC 59.529 40.000 0.48 0.00 32.34 3.18
5462 8872 5.240183 CACATTTGATGGAGACTGTTCACTT 59.760 40.000 0.00 0.00 33.60 3.16
5463 8873 5.240183 ACATTTGATGGAGACTGTTCACTTG 59.760 40.000 0.00 0.00 33.60 3.16
5464 8874 2.771089 TGATGGAGACTGTTCACTTGC 58.229 47.619 0.00 0.00 0.00 4.01
5473 8889 2.607635 ACTGTTCACTTGCAGTGTTACG 59.392 45.455 13.59 11.52 46.03 3.18
5479 8895 0.586319 CTTGCAGTGTTACGTGTGGG 59.414 55.000 0.00 0.00 0.00 4.61
5484 8900 2.066262 CAGTGTTACGTGTGGGACATC 58.934 52.381 0.00 0.00 44.52 3.06
5492 8908 1.067212 CGTGTGGGACATCTAGTAGGC 59.933 57.143 0.00 0.00 44.52 3.93
5496 8912 1.291033 TGGGACATCTAGTAGGCCTGT 59.709 52.381 17.99 2.67 0.00 4.00
5501 8917 4.278919 GGACATCTAGTAGGCCTGTAACTC 59.721 50.000 17.99 0.00 0.00 3.01
5509 8925 0.253327 GGCCTGTAACTCCTTCTGGG 59.747 60.000 0.00 0.00 0.00 4.45
5524 8940 3.662290 TGGGACCAACCAGTAATGC 57.338 52.632 0.00 0.00 41.20 3.56
5530 8946 0.171007 CCAACCAGTAATGCCTTGCG 59.829 55.000 0.00 0.00 0.00 4.85
5543 8963 1.661112 GCCTTGCGTCTATTGTGTCTC 59.339 52.381 0.00 0.00 0.00 3.36
5556 8976 8.394121 GTCTATTGTGTCTCCTCATTTGAAATC 58.606 37.037 0.00 0.00 0.00 2.17
5566 8986 5.713389 TCCTCATTTGAAATCTGTGCATTCT 59.287 36.000 0.00 0.00 0.00 2.40
5575 8995 7.475015 TGAAATCTGTGCATTCTATGTTTAGC 58.525 34.615 0.00 0.00 0.00 3.09
5582 9005 8.242085 TGTGCATTCTATGTTTAGCATTTTTG 57.758 30.769 0.00 0.00 38.94 2.44
5596 9019 4.974368 CATTTTTGGCCATGAATGCAAT 57.026 36.364 21.62 4.74 0.00 3.56
5597 9020 4.667262 CATTTTTGGCCATGAATGCAATG 58.333 39.130 21.62 11.59 0.00 2.82
5598 9021 1.740297 TTTGGCCATGAATGCAATGC 58.260 45.000 6.09 0.00 0.00 3.56
5599 9022 0.613777 TTGGCCATGAATGCAATGCA 59.386 45.000 11.44 11.44 44.86 3.96
5600 9023 0.108089 TGGCCATGAATGCAATGCAC 60.108 50.000 11.23 0.00 43.04 4.57
5602 9025 1.567504 GCCATGAATGCAATGCACTC 58.432 50.000 11.23 10.54 43.04 3.51
5605 9030 2.167693 CCATGAATGCAATGCACTCCTT 59.832 45.455 14.29 2.64 43.04 3.36
5613 9038 3.441222 TGCAATGCACTCCTTCTGTATTG 59.559 43.478 2.72 5.23 41.84 1.90
5614 9039 4.025015 CAATGCACTCCTTCTGTATTGC 57.975 45.455 0.00 0.00 35.72 3.56
5757 9182 0.034089 ATTTAGACCCTGCTGGCACC 60.034 55.000 3.63 0.00 37.83 5.01
5787 9212 7.768582 TCATTTTATAATGACGGAGAAGCAGAA 59.231 33.333 4.67 0.00 43.93 3.02
5799 9224 5.637810 CGGAGAAGCAGAAATAGTTACACAA 59.362 40.000 0.00 0.00 0.00 3.33
5989 9414 1.877443 GCCCTAACTTTTCACGCTCAA 59.123 47.619 0.00 0.00 0.00 3.02
6000 9425 6.367422 ACTTTTCACGCTCAAATTTTTGAACA 59.633 30.769 7.13 0.00 45.61 3.18
6113 9538 7.291566 AGAGAGAAGTTAGAAGAATATCCGGA 58.708 38.462 6.61 6.61 0.00 5.14
6202 9627 0.036164 AATGGTAAGCACTGCACGGA 59.964 50.000 3.30 0.00 0.00 4.69
6249 9674 4.950475 TGTCACCCAAATACAACACTGAAA 59.050 37.500 0.00 0.00 0.00 2.69
6263 9688 5.779529 ACACTGAAAGAAGCAATTGACAT 57.220 34.783 10.34 0.00 37.43 3.06
6487 9914 2.926250 TGCCACAGCACCTTCCTT 59.074 55.556 0.00 0.00 46.52 3.36
6610 10037 0.109964 CGTCTATCAGCTAGCGCTCC 60.110 60.000 16.34 6.52 45.15 4.70
6636 10063 4.256110 CAGTTCACTGTCTTGATGGCATA 58.744 43.478 0.00 0.00 39.09 3.14
6700 10127 8.941995 AGAGCTAAAGGATGTATATACAGTCA 57.058 34.615 19.80 0.00 39.92 3.41
6778 10205 5.410924 TGGTATCAATCTGTGAAGAAGACG 58.589 41.667 0.00 0.00 40.50 4.18
6867 10294 2.839486 TCTTGAGATGACCACACACC 57.161 50.000 0.00 0.00 0.00 4.16
7001 10428 2.829120 AGCAGAAGGAAGACTACCTCAC 59.171 50.000 0.00 0.00 36.67 3.51
7117 10544 7.376435 TGCATTTCATCTCGAAGTTAAATGA 57.624 32.000 19.21 6.64 36.77 2.57
7125 10552 9.599866 TCATCTCGAAGTTAAATGACACAATAT 57.400 29.630 0.00 0.00 0.00 1.28
7137 10564 6.683974 ATGACACAATATCAAGTTACAGGC 57.316 37.500 0.00 0.00 0.00 4.85
7285 10715 3.575256 TGTCCTACTCCTTTTCGTAGCAA 59.425 43.478 0.00 0.00 33.46 3.91
7344 10778 5.642919 AGACTACTCTTGTACTAGTGTTCCG 59.357 44.000 15.33 8.61 0.00 4.30
7508 10942 7.226325 ACCAAACACATAAAACATGAAACATGG 59.774 33.333 14.70 0.00 0.00 3.66
7512 10946 6.700960 ACACATAAAACATGAAACATGGTGTG 59.299 34.615 14.70 18.17 38.32 3.82
7516 10950 3.988379 ACATGAAACATGGTGTGTGTC 57.012 42.857 14.70 0.00 44.08 3.67
7520 10954 2.948979 TGAAACATGGTGTGTGTCCTTC 59.051 45.455 0.00 0.00 43.31 3.46
7591 11034 5.576384 CACACATGCCATGTTTATTACAACC 59.424 40.000 7.80 0.00 42.70 3.77
7598 11041 6.373216 TGCCATGTTTATTACAACCTCTGTAC 59.627 38.462 0.00 0.00 40.33 2.90
7599 11042 6.456449 GCCATGTTTATTACAACCTCTGTACG 60.456 42.308 0.00 0.00 40.33 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 9.030301 GCCGCATTAGAACAAAATATATGTTTT 57.970 29.630 4.49 4.49 40.90 2.43
16 17 8.413229 AGCCGCATTAGAACAAAATATATGTTT 58.587 29.630 7.90 0.00 40.90 2.83
17 18 7.940850 AGCCGCATTAGAACAAAATATATGTT 58.059 30.769 6.53 6.53 43.37 2.71
18 19 7.510549 AGCCGCATTAGAACAAAATATATGT 57.489 32.000 0.00 0.00 0.00 2.29
19 20 8.693504 CAAAGCCGCATTAGAACAAAATATATG 58.306 33.333 0.00 0.00 0.00 1.78
20 21 8.413229 ACAAAGCCGCATTAGAACAAAATATAT 58.587 29.630 0.00 0.00 0.00 0.86
21 22 7.767261 ACAAAGCCGCATTAGAACAAAATATA 58.233 30.769 0.00 0.00 0.00 0.86
22 23 6.630071 ACAAAGCCGCATTAGAACAAAATAT 58.370 32.000 0.00 0.00 0.00 1.28
23 24 6.019779 ACAAAGCCGCATTAGAACAAAATA 57.980 33.333 0.00 0.00 0.00 1.40
24 25 4.881920 ACAAAGCCGCATTAGAACAAAAT 58.118 34.783 0.00 0.00 0.00 1.82
25 26 4.314740 ACAAAGCCGCATTAGAACAAAA 57.685 36.364 0.00 0.00 0.00 2.44
26 27 4.517453 AGTACAAAGCCGCATTAGAACAAA 59.483 37.500 0.00 0.00 0.00 2.83
27 28 4.069304 AGTACAAAGCCGCATTAGAACAA 58.931 39.130 0.00 0.00 0.00 2.83
28 29 3.670625 AGTACAAAGCCGCATTAGAACA 58.329 40.909 0.00 0.00 0.00 3.18
29 30 5.522460 TGATAGTACAAAGCCGCATTAGAAC 59.478 40.000 0.00 0.00 0.00 3.01
30 31 5.666462 TGATAGTACAAAGCCGCATTAGAA 58.334 37.500 0.00 0.00 0.00 2.10
31 32 5.270893 TGATAGTACAAAGCCGCATTAGA 57.729 39.130 0.00 0.00 0.00 2.10
32 33 5.984233 TTGATAGTACAAAGCCGCATTAG 57.016 39.130 0.00 0.00 0.00 1.73
33 34 6.935741 ATTTGATAGTACAAAGCCGCATTA 57.064 33.333 0.00 0.00 41.87 1.90
34 35 5.835113 ATTTGATAGTACAAAGCCGCATT 57.165 34.783 0.00 0.00 41.87 3.56
35 36 5.835113 AATTTGATAGTACAAAGCCGCAT 57.165 34.783 0.00 0.00 41.87 4.73
36 37 6.745159 TTAATTTGATAGTACAAAGCCGCA 57.255 33.333 0.00 0.00 41.87 5.69
37 38 8.531530 CATTTTAATTTGATAGTACAAAGCCGC 58.468 33.333 0.00 0.00 41.87 6.53
38 39 9.567848 ACATTTTAATTTGATAGTACAAAGCCG 57.432 29.630 0.00 0.00 41.87 5.52
69 70 8.787818 TCAAGGGTTCAGGGTTTAGAAATATAT 58.212 33.333 0.00 0.00 0.00 0.86
70 71 8.165267 TCAAGGGTTCAGGGTTTAGAAATATA 57.835 34.615 0.00 0.00 0.00 0.86
71 72 7.039722 TCAAGGGTTCAGGGTTTAGAAATAT 57.960 36.000 0.00 0.00 0.00 1.28
72 73 6.457159 TCAAGGGTTCAGGGTTTAGAAATA 57.543 37.500 0.00 0.00 0.00 1.40
73 74 5.333566 TCAAGGGTTCAGGGTTTAGAAAT 57.666 39.130 0.00 0.00 0.00 2.17
74 75 4.799715 TCAAGGGTTCAGGGTTTAGAAA 57.200 40.909 0.00 0.00 0.00 2.52
75 76 4.799715 TTCAAGGGTTCAGGGTTTAGAA 57.200 40.909 0.00 0.00 0.00 2.10
76 77 4.352595 TGATTCAAGGGTTCAGGGTTTAGA 59.647 41.667 0.00 0.00 0.00 2.10
77 78 4.662278 TGATTCAAGGGTTCAGGGTTTAG 58.338 43.478 0.00 0.00 0.00 1.85
78 79 4.733077 TGATTCAAGGGTTCAGGGTTTA 57.267 40.909 0.00 0.00 0.00 2.01
79 80 3.611025 TGATTCAAGGGTTCAGGGTTT 57.389 42.857 0.00 0.00 0.00 3.27
80 81 3.833559 ATGATTCAAGGGTTCAGGGTT 57.166 42.857 0.00 0.00 0.00 4.11
81 82 4.111577 TCTATGATTCAAGGGTTCAGGGT 58.888 43.478 0.00 0.00 0.00 4.34
82 83 4.778213 TCTATGATTCAAGGGTTCAGGG 57.222 45.455 0.00 0.00 0.00 4.45
83 84 8.790718 CAAATATCTATGATTCAAGGGTTCAGG 58.209 37.037 0.00 0.00 0.00 3.86
84 85 9.347240 ACAAATATCTATGATTCAAGGGTTCAG 57.653 33.333 0.00 0.00 0.00 3.02
85 86 9.699410 AACAAATATCTATGATTCAAGGGTTCA 57.301 29.630 0.00 0.00 0.00 3.18
93 94 9.882996 GCGATGAAAACAAATATCTATGATTCA 57.117 29.630 0.00 0.00 33.76 2.57
94 95 9.044724 CGCGATGAAAACAAATATCTATGATTC 57.955 33.333 0.00 0.00 0.00 2.52
95 96 8.773645 TCGCGATGAAAACAAATATCTATGATT 58.226 29.630 3.71 0.00 0.00 2.57
96 97 8.310406 TCGCGATGAAAACAAATATCTATGAT 57.690 30.769 3.71 0.00 0.00 2.45
97 98 7.569408 GCTCGCGATGAAAACAAATATCTATGA 60.569 37.037 10.36 0.00 0.00 2.15
98 99 6.517714 GCTCGCGATGAAAACAAATATCTATG 59.482 38.462 10.36 0.00 0.00 2.23
99 100 6.202762 TGCTCGCGATGAAAACAAATATCTAT 59.797 34.615 10.36 0.00 0.00 1.98
100 101 5.522097 TGCTCGCGATGAAAACAAATATCTA 59.478 36.000 10.36 0.00 0.00 1.98
101 102 4.332543 TGCTCGCGATGAAAACAAATATCT 59.667 37.500 10.36 0.00 0.00 1.98
102 103 4.587306 TGCTCGCGATGAAAACAAATATC 58.413 39.130 10.36 0.00 0.00 1.63
103 104 4.614555 TGCTCGCGATGAAAACAAATAT 57.385 36.364 10.36 0.00 0.00 1.28
104 105 4.341935 CATGCTCGCGATGAAAACAAATA 58.658 39.130 10.36 0.00 0.00 1.40
105 106 2.987413 TGCTCGCGATGAAAACAAAT 57.013 40.000 10.36 0.00 0.00 2.32
106 107 2.583739 CATGCTCGCGATGAAAACAAA 58.416 42.857 10.36 0.00 0.00 2.83
107 108 1.135717 CCATGCTCGCGATGAAAACAA 60.136 47.619 10.36 0.00 0.00 2.83
108 109 0.447406 CCATGCTCGCGATGAAAACA 59.553 50.000 10.36 1.69 0.00 2.83
109 110 0.726827 TCCATGCTCGCGATGAAAAC 59.273 50.000 10.36 0.00 0.00 2.43
110 111 1.667236 ATCCATGCTCGCGATGAAAA 58.333 45.000 10.36 0.00 0.00 2.29
111 112 1.667236 AATCCATGCTCGCGATGAAA 58.333 45.000 10.36 0.00 0.00 2.69
112 113 1.667236 AAATCCATGCTCGCGATGAA 58.333 45.000 10.36 0.00 0.00 2.57
113 114 2.407090 CTAAATCCATGCTCGCGATGA 58.593 47.619 10.36 0.00 0.00 2.92
114 115 1.136141 GCTAAATCCATGCTCGCGATG 60.136 52.381 10.36 5.00 0.00 3.84
115 116 1.151668 GCTAAATCCATGCTCGCGAT 58.848 50.000 10.36 0.00 0.00 4.58
116 117 1.215014 CGCTAAATCCATGCTCGCGA 61.215 55.000 9.26 9.26 41.39 5.87
117 118 1.202568 CGCTAAATCCATGCTCGCG 59.797 57.895 0.00 0.00 0.00 5.87
118 119 1.192534 GTACGCTAAATCCATGCTCGC 59.807 52.381 0.00 0.00 0.00 5.03
119 120 1.792949 GGTACGCTAAATCCATGCTCG 59.207 52.381 0.00 0.00 0.00 5.03
120 121 3.060602 GAGGTACGCTAAATCCATGCTC 58.939 50.000 0.00 0.00 0.00 4.26
121 122 2.700897 AGAGGTACGCTAAATCCATGCT 59.299 45.455 0.00 0.00 36.12 3.79
122 123 2.802816 CAGAGGTACGCTAAATCCATGC 59.197 50.000 0.00 0.00 35.27 4.06
123 124 2.802816 GCAGAGGTACGCTAAATCCATG 59.197 50.000 0.00 0.00 35.27 3.66
124 125 2.434336 TGCAGAGGTACGCTAAATCCAT 59.566 45.455 0.00 0.00 35.27 3.41
125 126 1.828595 TGCAGAGGTACGCTAAATCCA 59.171 47.619 0.00 0.00 35.27 3.41
126 127 2.202566 GTGCAGAGGTACGCTAAATCC 58.797 52.381 0.00 0.00 35.27 3.01
127 128 2.202566 GGTGCAGAGGTACGCTAAATC 58.797 52.381 0.00 0.00 35.27 2.17
128 129 1.553248 TGGTGCAGAGGTACGCTAAAT 59.447 47.619 0.00 0.00 35.27 1.40
129 130 0.970640 TGGTGCAGAGGTACGCTAAA 59.029 50.000 0.00 0.00 35.27 1.85
130 131 1.191535 ATGGTGCAGAGGTACGCTAA 58.808 50.000 0.00 0.00 35.27 3.09
131 132 1.191535 AATGGTGCAGAGGTACGCTA 58.808 50.000 0.00 0.00 35.27 4.26
132 133 0.324943 AAATGGTGCAGAGGTACGCT 59.675 50.000 0.00 0.00 40.82 5.07
133 134 0.447801 CAAATGGTGCAGAGGTACGC 59.552 55.000 0.00 0.00 0.00 4.42
134 135 1.086696 CCAAATGGTGCAGAGGTACG 58.913 55.000 0.00 0.00 0.00 3.67
135 136 0.811281 GCCAAATGGTGCAGAGGTAC 59.189 55.000 0.71 0.00 37.57 3.34
136 137 0.676466 CGCCAAATGGTGCAGAGGTA 60.676 55.000 0.00 0.00 39.04 3.08
137 138 1.973281 CGCCAAATGGTGCAGAGGT 60.973 57.895 0.00 0.00 39.04 3.85
138 139 2.879907 CGCCAAATGGTGCAGAGG 59.120 61.111 0.00 0.00 39.04 3.69
145 146 3.679738 CCCGTTGCGCCAAATGGT 61.680 61.111 15.38 0.00 34.84 3.55
146 147 3.625082 GACCCGTTGCGCCAAATGG 62.625 63.158 4.18 8.46 36.18 3.16
147 148 1.302383 TAGACCCGTTGCGCCAAATG 61.302 55.000 4.18 0.00 0.00 2.32
148 149 1.003112 TAGACCCGTTGCGCCAAAT 60.003 52.632 4.18 0.00 0.00 2.32
149 150 1.962306 GTAGACCCGTTGCGCCAAA 60.962 57.895 4.18 0.00 0.00 3.28
150 151 1.534336 TAGTAGACCCGTTGCGCCAA 61.534 55.000 4.18 0.00 0.00 4.52
151 152 1.940883 CTAGTAGACCCGTTGCGCCA 61.941 60.000 4.18 0.00 0.00 5.69
152 153 1.226888 CTAGTAGACCCGTTGCGCC 60.227 63.158 4.18 0.00 0.00 6.53
153 154 0.525029 GTCTAGTAGACCCGTTGCGC 60.525 60.000 18.10 0.00 39.28 6.09
154 155 0.806868 TGTCTAGTAGACCCGTTGCG 59.193 55.000 24.32 0.00 44.44 4.85
155 156 2.089980 TCTGTCTAGTAGACCCGTTGC 58.910 52.381 24.32 1.75 44.44 4.17
156 157 4.398358 TCATTCTGTCTAGTAGACCCGTTG 59.602 45.833 24.32 16.98 44.44 4.10
157 158 4.398673 GTCATTCTGTCTAGTAGACCCGTT 59.601 45.833 24.32 7.32 44.44 4.44
158 159 3.946558 GTCATTCTGTCTAGTAGACCCGT 59.053 47.826 24.32 8.00 44.44 5.28
159 160 3.002451 CGTCATTCTGTCTAGTAGACCCG 59.998 52.174 24.32 16.34 44.44 5.28
160 161 4.197750 TCGTCATTCTGTCTAGTAGACCC 58.802 47.826 24.32 4.52 44.44 4.46
161 162 5.571277 GTTCGTCATTCTGTCTAGTAGACC 58.429 45.833 24.32 9.65 44.44 3.85
162 163 5.257108 CGTTCGTCATTCTGTCTAGTAGAC 58.743 45.833 21.35 21.35 45.26 2.59
163 164 4.331992 CCGTTCGTCATTCTGTCTAGTAGA 59.668 45.833 0.00 0.00 0.00 2.59
164 165 4.496010 CCCGTTCGTCATTCTGTCTAGTAG 60.496 50.000 0.00 0.00 0.00 2.57
165 166 3.376234 CCCGTTCGTCATTCTGTCTAGTA 59.624 47.826 0.00 0.00 0.00 1.82
166 167 2.163815 CCCGTTCGTCATTCTGTCTAGT 59.836 50.000 0.00 0.00 0.00 2.57
167 168 2.798680 CCCGTTCGTCATTCTGTCTAG 58.201 52.381 0.00 0.00 0.00 2.43
168 169 1.135199 GCCCGTTCGTCATTCTGTCTA 60.135 52.381 0.00 0.00 0.00 2.59
169 170 0.389948 GCCCGTTCGTCATTCTGTCT 60.390 55.000 0.00 0.00 0.00 3.41
170 171 1.683790 CGCCCGTTCGTCATTCTGTC 61.684 60.000 0.00 0.00 0.00 3.51
171 172 1.736645 CGCCCGTTCGTCATTCTGT 60.737 57.895 0.00 0.00 0.00 3.41
172 173 3.081133 CGCCCGTTCGTCATTCTG 58.919 61.111 0.00 0.00 0.00 3.02
173 174 2.813908 GCGCCCGTTCGTCATTCT 60.814 61.111 0.00 0.00 0.00 2.40
174 175 4.204891 CGCGCCCGTTCGTCATTC 62.205 66.667 0.00 0.00 0.00 2.67
184 185 4.383602 CCAACTTCAACGCGCCCG 62.384 66.667 5.73 0.00 41.14 6.13
185 186 4.700365 GCCAACTTCAACGCGCCC 62.700 66.667 5.73 0.00 0.00 6.13
186 187 4.700365 GGCCAACTTCAACGCGCC 62.700 66.667 5.73 0.00 0.00 6.53
187 188 1.847890 TTAGGCCAACTTCAACGCGC 61.848 55.000 5.73 0.00 0.00 6.86
188 189 0.165944 CTTAGGCCAACTTCAACGCG 59.834 55.000 5.01 3.53 0.00 6.01
189 190 0.109735 GCTTAGGCCAACTTCAACGC 60.110 55.000 5.01 0.00 0.00 4.84
190 191 1.464997 GAGCTTAGGCCAACTTCAACG 59.535 52.381 5.01 0.00 39.73 4.10
191 192 1.813178 GGAGCTTAGGCCAACTTCAAC 59.187 52.381 5.01 0.00 39.73 3.18
192 193 1.705186 AGGAGCTTAGGCCAACTTCAA 59.295 47.619 5.01 0.00 39.73 2.69
193 194 1.003580 CAGGAGCTTAGGCCAACTTCA 59.996 52.381 5.01 0.00 39.73 3.02
194 195 1.743996 CAGGAGCTTAGGCCAACTTC 58.256 55.000 5.01 0.00 39.73 3.01
195 196 0.322906 GCAGGAGCTTAGGCCAACTT 60.323 55.000 5.01 0.00 39.73 2.66
196 197 1.301293 GCAGGAGCTTAGGCCAACT 59.699 57.895 5.01 0.00 39.73 3.16
197 198 1.750780 GGCAGGAGCTTAGGCCAAC 60.751 63.158 15.95 0.00 45.70 3.77
198 199 2.677228 GGCAGGAGCTTAGGCCAA 59.323 61.111 15.95 0.00 45.70 4.52
200 201 2.508436 GAGGCAGGAGCTTAGGCC 59.492 66.667 13.73 13.73 46.77 5.19
201 202 2.107953 CGAGGCAGGAGCTTAGGC 59.892 66.667 0.00 0.00 41.70 3.93
202 203 2.107953 GCGAGGCAGGAGCTTAGG 59.892 66.667 0.00 0.00 41.70 2.69
203 204 2.279120 CGCGAGGCAGGAGCTTAG 60.279 66.667 0.00 0.00 41.70 2.18
204 205 4.514577 GCGCGAGGCAGGAGCTTA 62.515 66.667 12.10 0.00 42.87 3.09
346 355 2.364324 GGACTATGGACTTGTGGCGATA 59.636 50.000 0.00 0.00 0.00 2.92
362 371 3.826754 CCGCGCTGCTCTGGACTA 61.827 66.667 5.56 0.00 0.00 2.59
367 376 3.729965 AATCTCCCGCGCTGCTCTG 62.730 63.158 5.56 0.00 0.00 3.35
379 388 0.536915 GGATGGCAGGCAGAATCTCC 60.537 60.000 1.89 0.00 0.00 3.71
383 392 2.318966 TGGGGATGGCAGGCAGAAT 61.319 57.895 1.89 0.00 0.00 2.40
457 467 3.191539 GCCAGCTTTCTCTCCGCG 61.192 66.667 0.00 0.00 0.00 6.46
485 495 7.008628 CACAATAAAATGAGACAAAGAATCGCC 59.991 37.037 0.00 0.00 0.00 5.54
487 497 8.023128 ACCACAATAAAATGAGACAAAGAATCG 58.977 33.333 0.00 0.00 0.00 3.34
1190 4239 1.300697 GGTCGAGACGCACCTTTGT 60.301 57.895 0.00 0.00 0.00 2.83
1266 4315 1.789078 CGCAGCTGCCTTGTTCTTGT 61.789 55.000 32.07 0.00 37.91 3.16
1527 4576 3.118334 GCATGGGGATGGATGAGAGATAG 60.118 52.174 0.00 0.00 0.00 2.08
1605 4654 0.955428 GCTCACGCTGGAAATGGTCA 60.955 55.000 0.00 0.00 0.00 4.02
2146 5195 6.893020 AATAGAACCAAATGTAGACCTCCT 57.107 37.500 0.00 0.00 0.00 3.69
2170 5219 5.239306 CAGCTTGTGTTCACCTTCAATTCTA 59.761 40.000 0.37 0.00 0.00 2.10
2451 5500 6.012508 AGACCCTTAATTCCTGACAAGATTCA 60.013 38.462 0.00 0.00 0.00 2.57
2452 5501 6.317391 CAGACCCTTAATTCCTGACAAGATTC 59.683 42.308 0.00 0.00 0.00 2.52
2453 5502 6.012508 TCAGACCCTTAATTCCTGACAAGATT 60.013 38.462 0.00 0.00 0.00 2.40
2454 5503 5.488919 TCAGACCCTTAATTCCTGACAAGAT 59.511 40.000 0.00 0.00 0.00 2.40
2455 5504 4.844085 TCAGACCCTTAATTCCTGACAAGA 59.156 41.667 0.00 0.00 0.00 3.02
2456 5505 5.165961 TCAGACCCTTAATTCCTGACAAG 57.834 43.478 0.00 0.00 0.00 3.16
2457 5506 5.576563 TTCAGACCCTTAATTCCTGACAA 57.423 39.130 0.00 0.00 34.08 3.18
2458 5507 5.576563 TTTCAGACCCTTAATTCCTGACA 57.423 39.130 0.00 0.00 34.08 3.58
2459 5508 6.887002 AGAATTTCAGACCCTTAATTCCTGAC 59.113 38.462 0.00 0.00 37.59 3.51
2460 5509 6.886459 CAGAATTTCAGACCCTTAATTCCTGA 59.114 38.462 0.00 0.00 37.59 3.86
2461 5510 6.886459 TCAGAATTTCAGACCCTTAATTCCTG 59.114 38.462 0.00 0.00 37.59 3.86
2462 5511 6.887002 GTCAGAATTTCAGACCCTTAATTCCT 59.113 38.462 10.03 0.00 37.59 3.36
2463 5512 6.887002 AGTCAGAATTTCAGACCCTTAATTCC 59.113 38.462 15.81 0.00 37.59 3.01
2464 5513 7.148171 CCAGTCAGAATTTCAGACCCTTAATTC 60.148 40.741 15.81 0.00 33.96 2.17
2465 5514 6.660949 CCAGTCAGAATTTCAGACCCTTAATT 59.339 38.462 15.81 0.00 33.96 1.40
2466 5515 6.183347 CCAGTCAGAATTTCAGACCCTTAAT 58.817 40.000 15.81 0.00 33.96 1.40
2467 5516 5.073144 ACCAGTCAGAATTTCAGACCCTTAA 59.927 40.000 15.81 0.00 33.96 1.85
2468 5517 4.597507 ACCAGTCAGAATTTCAGACCCTTA 59.402 41.667 15.81 0.00 33.96 2.69
2469 5518 3.395941 ACCAGTCAGAATTTCAGACCCTT 59.604 43.478 15.81 0.00 33.96 3.95
2470 5519 2.982488 ACCAGTCAGAATTTCAGACCCT 59.018 45.455 15.81 0.00 33.96 4.34
2471 5520 3.425162 ACCAGTCAGAATTTCAGACCC 57.575 47.619 15.81 0.00 33.96 4.46
2472 5521 3.503748 CCAACCAGTCAGAATTTCAGACC 59.496 47.826 15.81 2.13 33.96 3.85
2473 5522 3.057946 GCCAACCAGTCAGAATTTCAGAC 60.058 47.826 12.58 12.58 33.70 3.51
2474 5523 3.149196 GCCAACCAGTCAGAATTTCAGA 58.851 45.455 0.00 0.00 0.00 3.27
2475 5524 3.152341 AGCCAACCAGTCAGAATTTCAG 58.848 45.455 0.00 0.00 0.00 3.02
2476 5525 3.228188 AGCCAACCAGTCAGAATTTCA 57.772 42.857 0.00 0.00 0.00 2.69
2477 5526 3.823304 AGAAGCCAACCAGTCAGAATTTC 59.177 43.478 0.00 0.00 0.00 2.17
2478 5527 3.837355 AGAAGCCAACCAGTCAGAATTT 58.163 40.909 0.00 0.00 0.00 1.82
2479 5528 3.515602 AGAAGCCAACCAGTCAGAATT 57.484 42.857 0.00 0.00 0.00 2.17
2480 5529 3.515602 AAGAAGCCAACCAGTCAGAAT 57.484 42.857 0.00 0.00 0.00 2.40
2481 5530 3.214328 GAAAGAAGCCAACCAGTCAGAA 58.786 45.455 0.00 0.00 0.00 3.02
2482 5531 2.172505 TGAAAGAAGCCAACCAGTCAGA 59.827 45.455 0.00 0.00 0.00 3.27
2483 5532 2.551459 CTGAAAGAAGCCAACCAGTCAG 59.449 50.000 0.00 0.00 34.07 3.51
2487 5536 1.321474 TGCTGAAAGAAGCCAACCAG 58.679 50.000 0.00 0.00 42.83 4.00
2501 5550 6.136857 ACAGAGGGAGTAGTAAATATGCTGA 58.863 40.000 0.00 0.00 0.00 4.26
2511 5560 3.839323 TTTGGGACAGAGGGAGTAGTA 57.161 47.619 0.00 0.00 42.39 1.82
2512 5561 2.715763 TTTGGGACAGAGGGAGTAGT 57.284 50.000 0.00 0.00 42.39 2.73
2513 5562 5.189934 AGTTATTTTGGGACAGAGGGAGTAG 59.810 44.000 0.00 0.00 42.39 2.57
2514 5563 5.045869 CAGTTATTTTGGGACAGAGGGAGTA 60.046 44.000 0.00 0.00 42.39 2.59
2515 5564 3.916989 AGTTATTTTGGGACAGAGGGAGT 59.083 43.478 0.00 0.00 42.39 3.85
2516 5565 4.263506 ACAGTTATTTTGGGACAGAGGGAG 60.264 45.833 0.00 0.00 42.39 4.30
2517 5566 3.655777 ACAGTTATTTTGGGACAGAGGGA 59.344 43.478 0.00 0.00 42.39 4.20
2518 5567 4.010349 GACAGTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
2519 5568 4.911390 AGACAGTTATTTTGGGACAGAGG 58.089 43.478 0.00 0.00 42.39 3.69
2520 5569 5.551233 TGAGACAGTTATTTTGGGACAGAG 58.449 41.667 0.00 0.00 42.39 3.35
2521 5570 5.560722 TGAGACAGTTATTTTGGGACAGA 57.439 39.130 0.00 0.00 42.39 3.41
2522 5571 5.765182 AGTTGAGACAGTTATTTTGGGACAG 59.235 40.000 0.00 0.00 42.39 3.51
2523 5572 5.690865 AGTTGAGACAGTTATTTTGGGACA 58.309 37.500 0.00 0.00 0.00 4.02
2524 5573 6.635030 AAGTTGAGACAGTTATTTTGGGAC 57.365 37.500 0.00 0.00 0.00 4.46
2525 5574 7.996644 ACTAAAGTTGAGACAGTTATTTTGGGA 59.003 33.333 0.00 0.00 0.00 4.37
2526 5575 8.166422 ACTAAAGTTGAGACAGTTATTTTGGG 57.834 34.615 0.00 0.00 0.00 4.12
2540 5589 9.893305 CCCAAAATAAGTTGTACTAAAGTTGAG 57.107 33.333 0.00 0.00 0.00 3.02
2541 5590 9.629878 TCCCAAAATAAGTTGTACTAAAGTTGA 57.370 29.630 0.00 0.00 0.00 3.18
2554 5603 8.528044 TCAGTACAACTTTCCCAAAATAAGTT 57.472 30.769 0.00 0.00 41.42 2.66
2555 5604 8.528044 TTCAGTACAACTTTCCCAAAATAAGT 57.472 30.769 0.00 0.00 33.76 2.24
2556 5605 8.630037 ACTTCAGTACAACTTTCCCAAAATAAG 58.370 33.333 0.00 0.00 0.00 1.73
2557 5606 8.528044 ACTTCAGTACAACTTTCCCAAAATAA 57.472 30.769 0.00 0.00 0.00 1.40
2558 5607 8.410141 CAACTTCAGTACAACTTTCCCAAAATA 58.590 33.333 0.00 0.00 0.00 1.40
2559 5608 7.123547 TCAACTTCAGTACAACTTTCCCAAAAT 59.876 33.333 0.00 0.00 0.00 1.82
2560 5609 6.434652 TCAACTTCAGTACAACTTTCCCAAAA 59.565 34.615 0.00 0.00 0.00 2.44
2561 5610 5.946972 TCAACTTCAGTACAACTTTCCCAAA 59.053 36.000 0.00 0.00 0.00 3.28
2562 5611 5.502079 TCAACTTCAGTACAACTTTCCCAA 58.498 37.500 0.00 0.00 0.00 4.12
2563 5612 5.105567 TCAACTTCAGTACAACTTTCCCA 57.894 39.130 0.00 0.00 0.00 4.37
2564 5613 6.127842 TGTTTCAACTTCAGTACAACTTTCCC 60.128 38.462 0.00 0.00 0.00 3.97
2565 5614 6.745907 GTGTTTCAACTTCAGTACAACTTTCC 59.254 38.462 0.00 0.00 0.00 3.13
2566 5615 7.527457 AGTGTTTCAACTTCAGTACAACTTTC 58.473 34.615 0.00 0.00 0.00 2.62
2567 5616 7.448748 AGTGTTTCAACTTCAGTACAACTTT 57.551 32.000 0.00 0.00 0.00 2.66
2568 5617 7.448748 AAGTGTTTCAACTTCAGTACAACTT 57.551 32.000 0.00 0.00 35.44 2.66
2569 5618 8.732746 ATAAGTGTTTCAACTTCAGTACAACT 57.267 30.769 0.00 0.00 40.77 3.16
2570 5619 9.783256 AAATAAGTGTTTCAACTTCAGTACAAC 57.217 29.630 0.00 0.00 40.77 3.32
2572 5621 9.781834 CAAAATAAGTGTTTCAACTTCAGTACA 57.218 29.630 0.00 0.00 40.77 2.90
2573 5622 9.233232 CCAAAATAAGTGTTTCAACTTCAGTAC 57.767 33.333 0.00 0.00 40.77 2.73
2574 5623 8.410141 CCCAAAATAAGTGTTTCAACTTCAGTA 58.590 33.333 0.00 0.00 40.77 2.74
2575 5624 7.123547 TCCCAAAATAAGTGTTTCAACTTCAGT 59.876 33.333 0.00 0.00 40.77 3.41
2576 5625 7.435192 GTCCCAAAATAAGTGTTTCAACTTCAG 59.565 37.037 0.00 0.00 40.77 3.02
2577 5626 7.262048 GTCCCAAAATAAGTGTTTCAACTTCA 58.738 34.615 0.00 0.00 40.77 3.02
2578 5627 6.416750 CGTCCCAAAATAAGTGTTTCAACTTC 59.583 38.462 0.00 0.00 40.77 3.01
2579 5628 6.270064 CGTCCCAAAATAAGTGTTTCAACTT 58.730 36.000 0.00 0.00 42.89 2.66
2580 5629 5.221165 CCGTCCCAAAATAAGTGTTTCAACT 60.221 40.000 0.00 0.00 0.00 3.16
2581 5630 4.979815 CCGTCCCAAAATAAGTGTTTCAAC 59.020 41.667 0.00 0.00 0.00 3.18
2582 5631 4.888239 TCCGTCCCAAAATAAGTGTTTCAA 59.112 37.500 0.00 0.00 0.00 2.69
2583 5632 4.462133 TCCGTCCCAAAATAAGTGTTTCA 58.538 39.130 0.00 0.00 0.00 2.69
2584 5633 4.082949 CCTCCGTCCCAAAATAAGTGTTTC 60.083 45.833 0.00 0.00 0.00 2.78
2585 5634 3.824443 CCTCCGTCCCAAAATAAGTGTTT 59.176 43.478 0.00 0.00 0.00 2.83
2586 5635 3.418047 CCTCCGTCCCAAAATAAGTGTT 58.582 45.455 0.00 0.00 0.00 3.32
2587 5636 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
2588 5637 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
2589 5638 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2590 5639 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
2591 5640 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2592 5641 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2593 5642 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2594 5643 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
2595 5644 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
2596 5645 2.852714 TAATACTCCCTCCGTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
2597 5646 2.674420 CTTAATACTCCCTCCGTCCCA 58.326 52.381 0.00 0.00 0.00 4.37
2598 5647 1.343789 GCTTAATACTCCCTCCGTCCC 59.656 57.143 0.00 0.00 0.00 4.46
2599 5648 2.317973 AGCTTAATACTCCCTCCGTCC 58.682 52.381 0.00 0.00 0.00 4.79
2600 5649 4.099727 AGAAAGCTTAATACTCCCTCCGTC 59.900 45.833 0.00 0.00 0.00 4.79
2601 5650 4.031611 AGAAAGCTTAATACTCCCTCCGT 58.968 43.478 0.00 0.00 0.00 4.69
2602 5651 4.099573 TCAGAAAGCTTAATACTCCCTCCG 59.900 45.833 0.00 0.00 0.00 4.63
2603 5652 5.615925 TCAGAAAGCTTAATACTCCCTCC 57.384 43.478 0.00 0.00 0.00 4.30
2604 5653 7.106890 AGTTTCAGAAAGCTTAATACTCCCTC 58.893 38.462 0.00 0.00 0.00 4.30
2605 5654 7.021998 AGTTTCAGAAAGCTTAATACTCCCT 57.978 36.000 0.00 0.00 0.00 4.20
2606 5655 7.148222 GGAAGTTTCAGAAAGCTTAATACTCCC 60.148 40.741 0.00 0.00 36.23 4.30
2607 5656 7.608376 AGGAAGTTTCAGAAAGCTTAATACTCC 59.392 37.037 0.00 0.00 36.23 3.85
2608 5657 8.554835 AGGAAGTTTCAGAAAGCTTAATACTC 57.445 34.615 0.00 0.00 36.23 2.59
2609 5658 8.787852 CAAGGAAGTTTCAGAAAGCTTAATACT 58.212 33.333 0.00 0.00 36.23 2.12
2610 5659 7.539022 GCAAGGAAGTTTCAGAAAGCTTAATAC 59.461 37.037 0.00 0.00 36.23 1.89
2639 5688 1.691434 GAGCCAGCCTATAGTTGCTCT 59.309 52.381 16.54 7.12 41.43 4.09
2689 5738 8.234136 ACAGAACATGATGCAGATCATAAAAT 57.766 30.769 0.00 0.00 45.92 1.82
2717 5767 9.421399 TCCGATATGGAGTACAATATATGACAT 57.579 33.333 0.00 0.00 43.74 3.06
2734 5784 0.104120 TTCACGCCACTCCGATATGG 59.896 55.000 0.00 0.00 39.16 2.74
2737 5787 1.472552 CCATTTCACGCCACTCCGATA 60.473 52.381 0.00 0.00 0.00 2.92
2739 5789 1.375396 CCATTTCACGCCACTCCGA 60.375 57.895 0.00 0.00 0.00 4.55
2740 5790 2.398554 CCCATTTCACGCCACTCCG 61.399 63.158 0.00 0.00 0.00 4.63
2749 5799 3.386402 TGTTCTGGTTTTCCCCATTTCAC 59.614 43.478 0.00 0.00 39.73 3.18
2830 5880 9.855021 ATGTTGTTAAGCCAAGAATAATACAAC 57.145 29.630 0.00 0.00 41.72 3.32
3049 6099 3.898123 TCTGATAGCCTTGGATCAGGTAC 59.102 47.826 14.47 0.00 46.08 3.34
3276 6326 6.421801 GCACAATGTTTAAGCAAGTTCTTGAT 59.578 34.615 15.52 7.09 0.00 2.57
3286 6336 3.549827 CCAACTCGCACAATGTTTAAGCA 60.550 43.478 0.00 0.00 0.00 3.91
3949 6999 6.861065 TGACCTAACATCTGAAACAGAAAC 57.139 37.500 5.57 0.00 44.04 2.78
3962 7012 5.893255 ACATACCATGCAATTGACCTAACAT 59.107 36.000 10.34 0.00 0.00 2.71
3966 7016 5.372343 AGACATACCATGCAATTGACCTA 57.628 39.130 10.34 0.00 0.00 3.08
3997 7047 1.068588 TCAGTCTTGAACACTGACCCG 59.931 52.381 0.00 0.00 44.33 5.28
4011 7061 4.161189 CCCACATGATAGTCAGTTCAGTCT 59.839 45.833 0.00 0.00 0.00 3.24
4052 7103 6.604795 CCAATCCTCAGTTAAGTCCATGATTT 59.395 38.462 0.00 0.00 0.00 2.17
4065 7119 4.263905 TGCAATTAGACCCAATCCTCAGTT 60.264 41.667 0.00 0.00 0.00 3.16
4069 7123 4.706962 ACTTTGCAATTAGACCCAATCCTC 59.293 41.667 0.00 0.00 0.00 3.71
4104 7158 9.936759 GAACAAGGGGTAAATTTATTCAATGAA 57.063 29.630 0.00 0.00 0.00 2.57
4125 7179 7.254556 GCATATGATTCAGATTCACTCGAACAA 60.255 37.037 6.97 0.00 32.81 2.83
4132 7186 7.201794 CCAAACAGCATATGATTCAGATTCACT 60.202 37.037 6.97 0.00 0.00 3.41
4168 7222 4.985538 AGTGAACCAATGAGCTAGGAAAA 58.014 39.130 0.00 0.00 0.00 2.29
4171 7225 4.737855 GTAGTGAACCAATGAGCTAGGA 57.262 45.455 0.00 0.00 0.00 2.94
4206 7260 3.063452 ACAACTACAGTGCGACAAAGTTG 59.937 43.478 15.40 15.40 45.76 3.16
4214 7268 3.063588 CGAGATCTACAACTACAGTGCGA 59.936 47.826 0.00 0.00 0.00 5.10
4215 7269 3.063588 TCGAGATCTACAACTACAGTGCG 59.936 47.826 0.00 0.00 0.00 5.34
4216 7270 4.333095 TCTCGAGATCTACAACTACAGTGC 59.667 45.833 12.08 0.00 0.00 4.40
4225 7281 8.397575 ACTTGCTATAATCTCGAGATCTACAA 57.602 34.615 27.43 22.39 32.75 2.41
4236 7292 6.508777 ACTTTCCGAGACTTGCTATAATCTC 58.491 40.000 0.00 0.00 35.30 2.75
4330 7391 9.092876 GTTGGAATGAACATGTTTAAAAACTGA 57.907 29.630 13.36 0.00 39.59 3.41
4337 7398 6.922957 GCTTCAGTTGGAATGAACATGTTTAA 59.077 34.615 13.36 4.93 34.32 1.52
4348 7422 6.680810 TCTAAAATGTGCTTCAGTTGGAATG 58.319 36.000 0.00 0.00 34.50 2.67
4352 7426 5.183713 TGGATCTAAAATGTGCTTCAGTTGG 59.816 40.000 0.00 0.00 34.50 3.77
4382 7456 7.655732 ACCTTAAGACAACAACATTAAAATGCC 59.344 33.333 3.36 0.00 40.04 4.40
4479 7564 8.918202 AAACACTTGAATAGGTCTAATCAACA 57.082 30.769 4.82 0.00 33.07 3.33
4560 7709 9.096823 TCTTATCCTCCAAGTTGAGTAAAAGTA 57.903 33.333 3.87 0.00 0.00 2.24
4561 7710 7.974504 TCTTATCCTCCAAGTTGAGTAAAAGT 58.025 34.615 3.87 0.00 0.00 2.66
4562 7711 8.722394 GTTCTTATCCTCCAAGTTGAGTAAAAG 58.278 37.037 3.87 1.56 0.00 2.27
4617 7766 9.537192 CGTAGGGTGAAATTTAATACTGTATCA 57.463 33.333 0.00 0.00 0.00 2.15
4619 7768 9.895138 AACGTAGGGTGAAATTTAATACTGTAT 57.105 29.630 0.00 0.00 0.00 2.29
4620 7769 9.723601 AAACGTAGGGTGAAATTTAATACTGTA 57.276 29.630 0.00 0.00 0.00 2.74
4621 7770 8.625786 AAACGTAGGGTGAAATTTAATACTGT 57.374 30.769 0.00 0.00 0.00 3.55
4622 7771 8.943002 AGAAACGTAGGGTGAAATTTAATACTG 58.057 33.333 0.00 0.00 0.00 2.74
4637 7786 6.090783 GCCAAATTTTCTTAGAAACGTAGGG 58.909 40.000 6.93 6.99 0.00 3.53
4643 7792 7.545615 CAGGTATGGCCAAATTTTCTTAGAAAC 59.454 37.037 10.96 0.00 40.61 2.78
4668 7817 1.377690 TTCAATAAGGGGGCTGGACA 58.622 50.000 0.00 0.00 0.00 4.02
4701 7850 7.448777 TCCCATCTGTAATATCTAGTGACTGAC 59.551 40.741 0.00 0.00 0.00 3.51
4710 7859 4.222145 GGCGGTTCCCATCTGTAATATCTA 59.778 45.833 0.00 0.00 0.00 1.98
4712 7861 3.244422 TGGCGGTTCCCATCTGTAATATC 60.244 47.826 0.00 0.00 0.00 1.63
4732 7881 8.044060 TCAAAGAAATAATAAGTCAGTGCTGG 57.956 34.615 0.00 0.00 0.00 4.85
4745 7894 9.712305 CTGAGGGTCGTATATCAAAGAAATAAT 57.288 33.333 0.00 0.00 0.00 1.28
4747 7896 7.667557 CCTGAGGGTCGTATATCAAAGAAATA 58.332 38.462 0.00 0.00 0.00 1.40
4756 7905 1.819903 GAGGCCTGAGGGTCGTATATC 59.180 57.143 12.00 0.00 43.12 1.63
4825 8099 6.910433 GTGTCACTTAGTGTTTGTATTGTTGG 59.090 38.462 12.41 0.00 34.79 3.77
4837 8111 4.700213 AGCAAAAACTGTGTCACTTAGTGT 59.300 37.500 12.41 0.00 34.79 3.55
4842 8116 2.417243 GGCAGCAAAAACTGTGTCACTT 60.417 45.455 4.27 0.00 39.96 3.16
4844 8118 1.134946 AGGCAGCAAAAACTGTGTCAC 59.865 47.619 0.00 0.00 39.96 3.67
4934 8208 3.265791 CTCTTGCCTTGATACTGTGGAC 58.734 50.000 0.00 0.00 0.00 4.02
4936 8210 3.340814 ACTCTTGCCTTGATACTGTGG 57.659 47.619 0.00 0.00 0.00 4.17
4939 8213 4.128925 TGCTACTCTTGCCTTGATACTG 57.871 45.455 0.00 0.00 0.00 2.74
4961 8235 2.687200 CATGGACCCCTCCCACGA 60.687 66.667 0.00 0.00 36.36 4.35
4971 8245 2.635427 GGATACTTCTCTCCCATGGACC 59.365 54.545 15.22 0.00 0.00 4.46
4975 8249 4.222336 ACTCTGGATACTTCTCTCCCATG 58.778 47.826 0.00 0.00 37.61 3.66
4979 8253 4.178956 AGGACTCTGGATACTTCTCTCC 57.821 50.000 0.00 0.00 37.61 3.71
5014 8290 7.918076 TGTACAATTGGACTCTTTCCTAATCT 58.082 34.615 21.32 0.00 46.10 2.40
5025 8301 6.881602 AGATCTTTCCTTGTACAATTGGACTC 59.118 38.462 21.32 7.48 0.00 3.36
5052 8347 6.839454 TGACCTCTCCTAATACGATTAGACT 58.161 40.000 13.08 0.00 0.00 3.24
5053 8348 7.308710 CCTTGACCTCTCCTAATACGATTAGAC 60.309 44.444 13.08 0.00 0.00 2.59
5054 8349 6.715718 CCTTGACCTCTCCTAATACGATTAGA 59.284 42.308 13.08 0.00 0.00 2.10
5055 8350 6.071840 CCCTTGACCTCTCCTAATACGATTAG 60.072 46.154 0.00 0.00 0.00 1.73
5056 8351 5.773680 CCCTTGACCTCTCCTAATACGATTA 59.226 44.000 0.00 0.00 0.00 1.75
5057 8352 4.589374 CCCTTGACCTCTCCTAATACGATT 59.411 45.833 0.00 0.00 0.00 3.34
5058 8353 4.153411 CCCTTGACCTCTCCTAATACGAT 58.847 47.826 0.00 0.00 0.00 3.73
5059 8354 3.053095 ACCCTTGACCTCTCCTAATACGA 60.053 47.826 0.00 0.00 0.00 3.43
5060 8355 3.297736 ACCCTTGACCTCTCCTAATACG 58.702 50.000 0.00 0.00 0.00 3.06
5061 8356 4.342665 CAGACCCTTGACCTCTCCTAATAC 59.657 50.000 0.00 0.00 0.00 1.89
5062 8357 4.232122 TCAGACCCTTGACCTCTCCTAATA 59.768 45.833 0.00 0.00 0.00 0.98
5063 8358 3.012959 TCAGACCCTTGACCTCTCCTAAT 59.987 47.826 0.00 0.00 0.00 1.73
5064 8359 2.382305 TCAGACCCTTGACCTCTCCTAA 59.618 50.000 0.00 0.00 0.00 2.69
5065 8360 2.000803 TCAGACCCTTGACCTCTCCTA 58.999 52.381 0.00 0.00 0.00 2.94
5066 8361 0.787084 TCAGACCCTTGACCTCTCCT 59.213 55.000 0.00 0.00 0.00 3.69
5067 8362 1.190643 CTCAGACCCTTGACCTCTCC 58.809 60.000 0.00 0.00 0.00 3.71
5068 8363 0.534873 GCTCAGACCCTTGACCTCTC 59.465 60.000 0.00 0.00 0.00 3.20
5069 8364 0.178921 TGCTCAGACCCTTGACCTCT 60.179 55.000 0.00 0.00 0.00 3.69
5070 8365 0.908198 ATGCTCAGACCCTTGACCTC 59.092 55.000 0.00 0.00 0.00 3.85
5071 8366 0.908198 GATGCTCAGACCCTTGACCT 59.092 55.000 0.00 0.00 0.00 3.85
5081 8376 8.526978 GTCATCCTTATATAACAGATGCTCAGA 58.473 37.037 18.15 5.87 35.41 3.27
5154 8449 3.502979 GGTGTAGACGAGAGAAGAACTGT 59.497 47.826 0.00 0.00 0.00 3.55
5159 8454 6.828788 ACATATAGGTGTAGACGAGAGAAGA 58.171 40.000 0.00 0.00 0.00 2.87
5160 8455 7.874016 AGTACATATAGGTGTAGACGAGAGAAG 59.126 40.741 0.00 0.00 35.40 2.85
5173 8468 4.081642 CGGGGGATTGAGTACATATAGGTG 60.082 50.000 0.00 0.00 0.00 4.00
5174 8469 4.094476 CGGGGGATTGAGTACATATAGGT 58.906 47.826 0.00 0.00 0.00 3.08
5176 8471 3.513912 TGCGGGGGATTGAGTACATATAG 59.486 47.826 0.00 0.00 0.00 1.31
5177 8472 3.512496 TGCGGGGGATTGAGTACATATA 58.488 45.455 0.00 0.00 0.00 0.86
5178 8473 2.303022 CTGCGGGGGATTGAGTACATAT 59.697 50.000 0.00 0.00 0.00 1.78
5179 8474 1.691976 CTGCGGGGGATTGAGTACATA 59.308 52.381 0.00 0.00 0.00 2.29
5180 8475 0.469917 CTGCGGGGGATTGAGTACAT 59.530 55.000 0.00 0.00 0.00 2.29
5181 8476 1.904771 CTGCGGGGGATTGAGTACA 59.095 57.895 0.00 0.00 0.00 2.90
5182 8477 1.523938 GCTGCGGGGGATTGAGTAC 60.524 63.158 0.00 0.00 0.00 2.73
5241 8536 2.032030 CGTGTTGTGAACCTTGATCCAC 60.032 50.000 0.00 0.00 0.00 4.02
5244 8539 4.527564 CTTTCGTGTTGTGAACCTTGATC 58.472 43.478 0.00 0.00 0.00 2.92
5258 8553 3.006940 TGAAAAGTGAGTGCTTTCGTGT 58.993 40.909 0.00 0.00 37.68 4.49
5311 8712 4.512944 GGCGAAAAGAGATTGATCATAGCA 59.487 41.667 0.00 0.00 0.00 3.49
5314 8715 7.420002 CATTTGGCGAAAAGAGATTGATCATA 58.580 34.615 0.00 0.00 0.00 2.15
5316 8717 5.643664 CATTTGGCGAAAAGAGATTGATCA 58.356 37.500 0.00 0.00 0.00 2.92
5334 8735 4.751098 AGCTTGTTTGTACCAATGCATTTG 59.249 37.500 9.83 9.30 34.93 2.32
5335 8736 4.751098 CAGCTTGTTTGTACCAATGCATTT 59.249 37.500 9.83 0.00 0.00 2.32
5336 8737 4.309099 CAGCTTGTTTGTACCAATGCATT 58.691 39.130 5.99 5.99 0.00 3.56
5337 8738 3.306225 CCAGCTTGTTTGTACCAATGCAT 60.306 43.478 0.00 0.00 0.00 3.96
5338 8739 2.035704 CCAGCTTGTTTGTACCAATGCA 59.964 45.455 0.00 0.00 0.00 3.96
5339 8740 2.610232 CCCAGCTTGTTTGTACCAATGC 60.610 50.000 0.00 0.00 0.00 3.56
5340 8741 2.890311 TCCCAGCTTGTTTGTACCAATG 59.110 45.455 0.00 0.00 0.00 2.82
5341 8742 3.237268 TCCCAGCTTGTTTGTACCAAT 57.763 42.857 0.00 0.00 0.00 3.16
5342 8743 2.738587 TCCCAGCTTGTTTGTACCAA 57.261 45.000 0.00 0.00 0.00 3.67
5344 8745 3.939592 GAGTATCCCAGCTTGTTTGTACC 59.060 47.826 0.00 0.00 0.00 3.34
5345 8746 4.833390 AGAGTATCCCAGCTTGTTTGTAC 58.167 43.478 0.00 0.00 33.66 2.90
5369 8773 7.602644 TCTTTTGTGACATACTACATTGAGGTC 59.397 37.037 0.00 0.00 0.00 3.85
5371 8775 7.905604 TCTTTTGTGACATACTACATTGAGG 57.094 36.000 0.00 0.00 0.00 3.86
5385 8789 4.771590 TGGATTGCTCATCTTTTGTGAC 57.228 40.909 0.00 0.00 31.67 3.67
5397 8802 3.859386 CGCCTTATTTTGTTGGATTGCTC 59.141 43.478 0.00 0.00 0.00 4.26
5399 8804 2.929398 CCGCCTTATTTTGTTGGATTGC 59.071 45.455 0.00 0.00 0.00 3.56
5418 8823 9.863845 AAATGTGAAGTATAAAAATTTACCCCG 57.136 29.630 0.00 0.00 0.00 5.73
5436 8846 5.239306 GTGAACAGTCTCCATCAAATGTGAA 59.761 40.000 0.00 0.00 37.30 3.18
5445 8855 2.740981 CTGCAAGTGAACAGTCTCCATC 59.259 50.000 0.00 0.00 0.00 3.51
5446 8856 2.775890 CTGCAAGTGAACAGTCTCCAT 58.224 47.619 0.00 0.00 0.00 3.41
5447 8857 2.245159 CTGCAAGTGAACAGTCTCCA 57.755 50.000 0.00 0.00 0.00 3.86
5462 8872 0.531090 GTCCCACACGTAACACTGCA 60.531 55.000 0.00 0.00 0.00 4.41
5463 8873 0.531090 TGTCCCACACGTAACACTGC 60.531 55.000 0.00 0.00 0.00 4.40
5464 8874 2.066262 GATGTCCCACACGTAACACTG 58.934 52.381 0.00 0.00 0.00 3.66
5473 8889 1.413077 GGCCTACTAGATGTCCCACAC 59.587 57.143 0.00 0.00 0.00 3.82
5479 8895 4.278919 GGAGTTACAGGCCTACTAGATGTC 59.721 50.000 3.98 0.00 0.00 3.06
5484 8900 4.339814 CAGAAGGAGTTACAGGCCTACTAG 59.660 50.000 3.98 0.00 0.00 2.57
5509 8925 1.202348 GCAAGGCATTACTGGTTGGTC 59.798 52.381 0.00 0.00 0.00 4.02
5524 8940 2.093973 AGGAGACACAATAGACGCAAGG 60.094 50.000 0.00 0.00 46.39 3.61
5530 8946 7.672983 TTTCAAATGAGGAGACACAATAGAC 57.327 36.000 0.00 0.00 33.61 2.59
5543 8963 5.962433 AGAATGCACAGATTTCAAATGAGG 58.038 37.500 0.00 0.00 0.00 3.86
5556 8976 8.377681 CAAAAATGCTAAACATAGAATGCACAG 58.622 33.333 0.00 0.00 38.34 3.66
5566 8986 6.291648 TCATGGCCAAAAATGCTAAACATA 57.708 33.333 10.96 0.00 38.34 2.29
5575 8995 4.667262 CATTGCATTCATGGCCAAAAATG 58.333 39.130 27.24 27.24 33.31 2.32
5582 9005 0.177141 AGTGCATTGCATTCATGGCC 59.823 50.000 15.49 0.00 41.91 5.36
5595 9018 3.641434 AGCAATACAGAAGGAGTGCAT 57.359 42.857 2.86 0.00 34.44 3.96
5596 9019 3.515502 AGTAGCAATACAGAAGGAGTGCA 59.484 43.478 2.86 0.00 34.44 4.57
5597 9020 3.868077 CAGTAGCAATACAGAAGGAGTGC 59.132 47.826 0.00 0.00 0.00 4.40
5598 9021 4.867047 CACAGTAGCAATACAGAAGGAGTG 59.133 45.833 0.00 0.00 0.00 3.51
5599 9022 4.528596 ACACAGTAGCAATACAGAAGGAGT 59.471 41.667 0.00 0.00 0.00 3.85
5600 9023 5.078411 ACACAGTAGCAATACAGAAGGAG 57.922 43.478 0.00 0.00 0.00 3.69
5602 9025 6.398918 ACTTACACAGTAGCAATACAGAAGG 58.601 40.000 0.00 0.00 31.97 3.46
5605 9030 6.014925 TCCAACTTACACAGTAGCAATACAGA 60.015 38.462 0.00 0.00 32.94 3.41
5613 9038 4.252971 TGAGTCCAACTTACACAGTAGC 57.747 45.455 0.00 0.00 32.94 3.58
5614 9039 5.844004 ACTTGAGTCCAACTTACACAGTAG 58.156 41.667 0.00 0.00 32.94 2.57
5775 9200 5.168569 TGTGTAACTATTTCTGCTTCTCCG 58.831 41.667 0.00 0.00 38.04 4.63
5787 9212 9.507329 AGATTGAGAACATGTTGTGTAACTATT 57.493 29.630 17.58 0.00 41.14 1.73
5799 9224 5.010314 ACAATGCACAAGATTGAGAACATGT 59.990 36.000 4.06 0.00 35.23 3.21
5842 9267 2.227865 TGCGGTGTTCAATTAAGGAAGC 59.772 45.455 0.00 0.00 0.00 3.86
6000 9425 8.712363 GCAGTCATGATTGTAATATGTTCGTAT 58.288 33.333 18.28 0.00 0.00 3.06
6111 9536 0.322906 CCTCAACCCCAGAAAGCTCC 60.323 60.000 0.00 0.00 0.00 4.70
6113 9538 0.853530 AACCTCAACCCCAGAAAGCT 59.146 50.000 0.00 0.00 0.00 3.74
6249 9674 6.380846 TGCCCTTATAAATGTCAATTGCTTCT 59.619 34.615 0.00 0.00 0.00 2.85
6284 9709 3.953612 GAGTATGAAATGATTGTGGCCCA 59.046 43.478 0.00 0.00 0.00 5.36
6778 10205 7.925993 TCTCTTCATATCTTCTCGAGTTCTTC 58.074 38.462 13.13 0.00 0.00 2.87
6867 10294 2.981560 GGCGAACCACATGGCACAG 61.982 63.158 0.00 0.00 37.69 3.66
7090 10517 8.740369 CATTTAACTTCGAGATGAAATGCATTC 58.260 33.333 13.38 7.13 37.34 2.67
7117 10544 3.374058 GCGCCTGTAACTTGATATTGTGT 59.626 43.478 0.00 0.00 0.00 3.72
7125 10552 0.863144 GAAACGCGCCTGTAACTTGA 59.137 50.000 5.73 0.00 0.00 3.02
7137 10564 1.933853 CCAGGGATTAAGAGAAACGCG 59.066 52.381 3.53 3.53 0.00 6.01
7181 10611 6.012508 ACCATGATAAGGGAAAGAAAGAGACA 60.013 38.462 0.00 0.00 0.00 3.41
7497 10931 2.886523 AGGACACACACCATGTTTCATG 59.113 45.455 3.11 3.11 40.64 3.07
7536 10978 4.019792 TGTACAGGCCAGGCAATATATG 57.980 45.455 15.19 4.21 0.00 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.