Multiple sequence alignment - TraesCS6B01G295800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G295800 chr6B 100.000 8938 0 0 1 8938 531531035 531522098 0.000000e+00 16506.0
1 TraesCS6B01G295800 chr6B 93.750 176 11 0 4913 5088 225525372 225525547 1.910000e-66 265.0
2 TraesCS6B01G295800 chr6B 95.652 92 2 2 5431 5521 531525515 531525605 7.230000e-31 147.0
3 TraesCS6B01G295800 chr6B 100.000 30 0 0 4875 4904 531525944 531525915 1.000000e-03 56.5
4 TraesCS6B01G295800 chr6B 100.000 30 0 0 5092 5121 531526161 531526132 1.000000e-03 56.5
5 TraesCS6B01G295800 chr6A 93.965 3778 158 31 4 3735 495434338 495430585 0.000000e+00 5650.0
6 TraesCS6B01G295800 chr6A 95.200 2500 77 15 5523 8007 495428982 495426511 0.000000e+00 3912.0
7 TraesCS6B01G295800 chr6A 90.859 1619 92 15 3857 5430 495430588 495428981 0.000000e+00 2119.0
8 TraesCS6B01G295800 chr6A 88.179 626 41 8 8276 8901 495418249 495417657 0.000000e+00 715.0
9 TraesCS6B01G295800 chr6A 90.625 288 20 3 8005 8289 495423690 495423407 8.470000e-100 375.0
10 TraesCS6B01G295800 chr6A 95.556 135 6 0 3727 3861 554386123 554386257 5.430000e-52 217.0
11 TraesCS6B01G295800 chr6A 100.000 30 0 0 4875 4904 495429335 495429306 1.000000e-03 56.5
12 TraesCS6B01G295800 chr6D 95.160 3430 128 16 5523 8938 348280805 348284210 0.000000e+00 5380.0
13 TraesCS6B01G295800 chr6D 94.289 3467 121 33 322 3735 348275726 348279168 0.000000e+00 5234.0
14 TraesCS6B01G295800 chr6D 95.488 820 34 2 4611 5427 348279984 348280803 0.000000e+00 1306.0
15 TraesCS6B01G295800 chr6D 93.590 702 34 5 3857 4548 348279165 348279865 0.000000e+00 1037.0
16 TraesCS6B01G295800 chr6D 71.805 266 58 13 8358 8614 389978462 389978719 9.690000e-05 60.2
17 TraesCS6B01G295800 chr6D 100.000 30 0 0 5092 5121 348280249 348280278 1.000000e-03 56.5
18 TraesCS6B01G295800 chr6D 96.970 33 0 1 4876 4907 348280469 348280501 5.000000e-03 54.7
19 TraesCS6B01G295800 chr7A 94.253 174 10 0 4919 5092 83785005 83784832 5.320000e-67 267.0
20 TraesCS6B01G295800 chr7A 94.326 141 7 1 3720 3860 495545860 495545721 1.950000e-51 215.0
21 TraesCS6B01G295800 chr5B 94.253 174 9 1 4919 5092 574956616 574956444 1.910000e-66 265.0
22 TraesCS6B01G295800 chr5B 93.706 143 8 1 3733 3875 553351927 553352068 7.030000e-51 213.0
23 TraesCS6B01G295800 chr4D 94.706 170 9 0 4919 5088 65536121 65536290 1.910000e-66 265.0
24 TraesCS6B01G295800 chr4D 93.182 176 12 0 4913 5088 482703448 482703623 8.900000e-65 259.0
25 TraesCS6B01G295800 chr3D 93.750 176 11 0 4913 5088 422517617 422517792 1.910000e-66 265.0
26 TraesCS6B01G295800 chr2B 93.220 177 10 2 4913 5088 399342340 399342515 8.900000e-65 259.0
27 TraesCS6B01G295800 chr2B 96.241 133 5 0 3728 3860 77137379 77137511 1.510000e-52 219.0
28 TraesCS6B01G295800 chr1B 95.000 140 7 0 3723 3862 560493076 560493215 4.200000e-53 220.0
29 TraesCS6B01G295800 chr1B 94.928 138 7 0 3724 3861 626227015 626226878 5.430000e-52 217.0
30 TraesCS6B01G295800 chrUn 92.667 150 11 0 3726 3875 103517781 103517632 5.430000e-52 217.0
31 TraesCS6B01G295800 chrUn 93.706 143 9 0 3719 3861 150797776 150797918 1.950000e-51 215.0
32 TraesCS6B01G295800 chr4B 94.891 137 7 0 3725 3861 55925896 55926032 1.950000e-51 215.0
33 TraesCS6B01G295800 chr2D 86.364 88 8 4 5433 5516 621874626 621874539 9.550000e-15 93.5
34 TraesCS6B01G295800 chr2D 84.091 88 10 4 5436 5519 621874539 621874626 2.070000e-11 82.4
35 TraesCS6B01G295800 chr1A 94.915 59 2 1 5429 5486 534269912 534269854 3.440000e-14 91.6
36 TraesCS6B01G295800 chr1A 91.935 62 3 2 5465 5525 534269853 534269913 1.600000e-12 86.1
37 TraesCS6B01G295800 chr1D 93.103 58 3 1 5430 5486 326980928 326980985 5.750000e-12 84.2
38 TraesCS6B01G295800 chr1D 90.164 61 5 1 5465 5524 326980986 326980926 2.680000e-10 78.7
39 TraesCS6B01G295800 chr2A 95.122 41 2 0 5429 5469 343794813 343794773 2.080000e-06 65.8
40 TraesCS6B01G295800 chr2A 97.143 35 0 1 5491 5525 343794781 343794814 3.490000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G295800 chr6B 531522098 531531035 8937 True 16506.000000 16506 100.000000 1 8938 1 chr6B.!!$R1 8937
1 TraesCS6B01G295800 chr6A 495423407 495434338 10931 True 2422.500000 5650 94.129800 4 8289 5 chr6A.!!$R2 8285
2 TraesCS6B01G295800 chr6A 495417657 495418249 592 True 715.000000 715 88.179000 8276 8901 1 chr6A.!!$R1 625
3 TraesCS6B01G295800 chr6D 348275726 348284210 8484 False 2178.033333 5380 95.916167 322 8938 6 chr6D.!!$F2 8616

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 291 0.042131 AGGGGTCCGGTTGTAGATGA 59.958 55.000 0.00 0.00 0.00 2.92 F
336 349 0.317799 ATAACGTGCGTGTACCACCA 59.682 50.000 0.00 0.00 0.00 4.17 F
1599 1650 0.532862 ATTAGGCCATCTCCAACGCG 60.533 55.000 5.01 3.53 0.00 6.01 F
2076 2144 0.250467 CCCTTACATAGCTGCCGCAT 60.250 55.000 2.05 0.00 39.10 4.73 F
3750 3834 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46 F
3856 3940 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 F
3858 3942 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85 F
4970 5166 0.037697 CATGAGGTCACGGGTTCGAA 60.038 55.000 0.00 0.00 40.11 3.71 F
5502 5718 0.108585 AAGTCGAAAGCTGGCAGGAA 59.891 50.000 17.64 0.00 0.00 3.36 F
5508 5724 0.114954 AAAGCTGGCAGGAATCCCAA 59.885 50.000 17.64 0.00 33.88 4.12 F
5513 5729 0.189574 TGGCAGGAATCCCAACCAAA 59.810 50.000 3.36 0.00 36.93 3.28 F
5605 5821 0.393077 AGCTTCACCGTTACTGCACT 59.607 50.000 0.00 0.00 0.00 4.40 F
5606 5822 0.512952 GCTTCACCGTTACTGCACTG 59.487 55.000 0.00 0.00 0.00 3.66 F
5728 5946 1.211703 ACATCACATCGTGCCCCATTA 59.788 47.619 0.00 0.00 32.98 1.90 F
6310 6534 1.372582 GCAGACATCCGATCAGCAAA 58.627 50.000 0.00 0.00 0.00 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1263 1312 0.034896 AATCGAACTTGACAGGGCGT 59.965 50.000 0.00 0.0 0.00 5.68 R
1808 1864 0.385098 GCGCTGGGAAAACGTACAAC 60.385 55.000 0.00 0.0 0.00 3.32 R
3274 3358 0.529773 TCGAAATCGCTTCCATCCGG 60.530 55.000 0.00 0.0 39.60 5.14 R
3837 3921 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 R
5483 5699 0.108585 TTCCTGCCAGCTTTCGACTT 59.891 50.000 0.00 0.0 0.00 3.01 R
5513 5729 0.110486 CAGCTGTGTTAGGGGGTTGT 59.890 55.000 5.25 0.0 0.00 3.32 R
5605 5821 0.836606 TGGGAAGAGAAGTGCACACA 59.163 50.000 21.04 0.0 0.00 3.72 R
6633 6857 0.185901 AGCTGGCTTGGACCTTCAAA 59.814 50.000 0.00 0.0 0.00 2.69 R
7114 7347 2.677003 TACGCGGCTTTGCTTGAGC 61.677 57.895 12.47 0.0 42.50 4.26 R
7436 7669 7.800155 TGATGTTGTCATTACTGTTGAAGAA 57.200 32.000 0.00 0.0 34.06 2.52 R
7697 7930 7.448469 GGAAACATATGGCCTATTGACTACATT 59.552 37.037 3.32 0.0 0.00 2.71 R
7780 8013 3.006644 GGAGGACCTATTAACCATCGACC 59.993 52.174 0.00 0.0 0.00 4.79 R
7807 8042 9.216117 ACTTACTACACATTCTTCCAAACATAC 57.784 33.333 0.00 0.0 0.00 2.39 R
7911 8148 6.590292 AGAGTGAATACATGAACTAAACACGG 59.410 38.462 0.00 0.0 0.00 4.94 R
8333 11397 0.321653 GAGTGCTTCGGATTGGTGGT 60.322 55.000 0.00 0.0 0.00 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 0.468214 CGCTATCACTCTCCCTCCCA 60.468 60.000 0.00 0.00 0.00 4.37
45 46 1.688884 TGCGATGATGTGAGGGGGA 60.689 57.895 0.00 0.00 0.00 4.81
49 50 1.511613 GATGATGTGAGGGGGAAGGA 58.488 55.000 0.00 0.00 0.00 3.36
51 52 0.621571 TGATGTGAGGGGGAAGGAGG 60.622 60.000 0.00 0.00 0.00 4.30
57 58 2.040359 GGGGGAAGGAGGAGGGAG 60.040 72.222 0.00 0.00 0.00 4.30
60 61 2.770475 GGAAGGAGGAGGGAGGGC 60.770 72.222 0.00 0.00 0.00 5.19
118 120 2.162319 TGAGAGCAACGCAACATACA 57.838 45.000 0.00 0.00 0.00 2.29
123 125 0.179225 GCAACGCAACATACACTCGG 60.179 55.000 0.00 0.00 0.00 4.63
165 168 1.206610 ACGCTAGTCGACTGACCTCTA 59.793 52.381 28.12 4.99 46.74 2.43
170 173 1.003812 AGTCGACTGACCTCTAGTGCT 59.996 52.381 19.30 0.00 46.74 4.40
183 186 3.879892 CTCTAGTGCTGCCCTTTTTATCC 59.120 47.826 0.00 0.00 0.00 2.59
196 199 4.634443 CCTTTTTATCCGAACCCTGTGTAG 59.366 45.833 0.00 0.00 0.00 2.74
216 219 0.387750 GTTTTCGACCGGCGTCTAGT 60.388 55.000 16.00 0.00 41.80 2.57
219 222 3.812019 CGACCGGCGTCTAGTGCT 61.812 66.667 6.01 0.00 36.82 4.40
222 225 2.202623 CCGGCGTCTAGTGCTGTC 60.203 66.667 6.01 0.00 36.99 3.51
229 232 3.323243 GCGTCTAGTGCTGTCCTTTTTA 58.677 45.455 3.02 0.00 0.00 1.52
232 235 5.411781 CGTCTAGTGCTGTCCTTTTTATCT 58.588 41.667 0.00 0.00 0.00 1.98
236 239 7.064016 GTCTAGTGCTGTCCTTTTTATCTGAAG 59.936 40.741 0.00 0.00 0.00 3.02
252 255 3.135712 TCTGAAGCCTGTGTAGGTTTTCA 59.864 43.478 11.87 11.87 46.15 2.69
254 257 3.118038 TGAAGCCTGTGTAGGTTTTCAGT 60.118 43.478 9.69 0.00 46.15 3.41
256 259 3.477530 AGCCTGTGTAGGTTTTCAGTTC 58.522 45.455 0.00 0.00 46.41 3.01
258 261 3.630312 GCCTGTGTAGGTTTTCAGTTCAA 59.370 43.478 0.00 0.00 46.41 2.69
263 266 3.634910 TGTAGGTTTTCAGTTCAAAGGGC 59.365 43.478 0.00 0.00 0.00 5.19
264 267 2.745968 AGGTTTTCAGTTCAAAGGGCA 58.254 42.857 0.00 0.00 0.00 5.36
266 269 3.132824 AGGTTTTCAGTTCAAAGGGCAAG 59.867 43.478 0.00 0.00 0.00 4.01
267 270 3.118775 GGTTTTCAGTTCAAAGGGCAAGT 60.119 43.478 0.00 0.00 0.00 3.16
270 273 2.575532 TCAGTTCAAAGGGCAAGTGAG 58.424 47.619 0.00 0.00 30.15 3.51
278 281 4.410400 GGCAAGTGAGGGGTCCGG 62.410 72.222 0.00 0.00 0.00 5.14
288 291 0.042131 AGGGGTCCGGTTGTAGATGA 59.958 55.000 0.00 0.00 0.00 2.92
294 297 4.100498 GGGTCCGGTTGTAGATGATCTTTA 59.900 45.833 0.00 0.00 0.00 1.85
295 298 5.221661 GGGTCCGGTTGTAGATGATCTTTAT 60.222 44.000 0.00 0.00 0.00 1.40
336 349 0.317799 ATAACGTGCGTGTACCACCA 59.682 50.000 0.00 0.00 0.00 4.17
417 436 2.125633 GACCCTTCGCGGTTCCTC 60.126 66.667 6.13 0.00 35.79 3.71
592 631 7.523415 ACACCTTTCTATTTCCCACTTTCTTA 58.477 34.615 0.00 0.00 0.00 2.10
594 633 9.025041 CACCTTTCTATTTCCCACTTTCTTAAT 57.975 33.333 0.00 0.00 0.00 1.40
595 634 9.601810 ACCTTTCTATTTCCCACTTTCTTAATT 57.398 29.630 0.00 0.00 0.00 1.40
729 777 1.075600 GAGGACAGGAGAGGGAGGG 60.076 68.421 0.00 0.00 0.00 4.30
732 780 3.663815 GACAGGAGAGGGAGGGCGA 62.664 68.421 0.00 0.00 0.00 5.54
733 781 3.151022 CAGGAGAGGGAGGGCGAC 61.151 72.222 0.00 0.00 0.00 5.19
734 782 4.824515 AGGAGAGGGAGGGCGACG 62.825 72.222 0.00 0.00 0.00 5.12
939 987 1.478916 GCGAGGGAAGCTTCTAGAAGT 59.521 52.381 28.72 13.88 40.45 3.01
1247 1296 3.181472 CCTGCCTTTTTGCTTGTCTTCTT 60.181 43.478 0.00 0.00 0.00 2.52
1376 1427 7.282224 AGACTCTAACTGCTATCACTTAGAGTG 59.718 40.741 22.51 1.45 46.69 3.51
1383 1434 5.118990 TGCTATCACTTAGAGTGGCATTTC 58.881 41.667 8.11 0.00 45.94 2.17
1502 1553 5.360144 CCAGGAAATCTGATTTTCATGCTCT 59.640 40.000 20.55 0.00 46.18 4.09
1515 1566 2.159184 TCATGCTCTCTGTTAAGCTCGG 60.159 50.000 0.00 0.00 39.31 4.63
1564 1615 9.042008 GCATGCATTTTGAGATGAAATTTAGAT 57.958 29.630 14.21 0.00 0.00 1.98
1575 1626 9.932699 GAGATGAAATTTAGATCTGTTCACATG 57.067 33.333 14.19 0.00 31.45 3.21
1599 1650 0.532862 ATTAGGCCATCTCCAACGCG 60.533 55.000 5.01 3.53 0.00 6.01
1667 1718 2.146920 TGCATCATCAATTCCTGGCA 57.853 45.000 0.00 0.00 0.00 4.92
1751 1803 8.079809 AGAAGAGATAAGAAGCGCTATTTCTAC 58.920 37.037 12.05 5.86 33.92 2.59
1760 1816 5.532025 AGCGCTATTTCTACTTGTGTTTC 57.468 39.130 8.99 0.00 0.00 2.78
1763 1819 6.204882 AGCGCTATTTCTACTTGTGTTTCTTT 59.795 34.615 8.99 0.00 0.00 2.52
1764 1820 6.856426 GCGCTATTTCTACTTGTGTTTCTTTT 59.144 34.615 0.00 0.00 0.00 2.27
1848 1904 4.272504 CGCCTTGTGTTCTTCTGACTAAAA 59.727 41.667 0.00 0.00 0.00 1.52
1850 1906 5.065988 GCCTTGTGTTCTTCTGACTAAAACA 59.934 40.000 0.00 0.00 0.00 2.83
1854 1910 6.417191 GTGTTCTTCTGACTAAAACACACA 57.583 37.500 10.78 0.00 45.56 3.72
1861 1925 9.391006 TCTTCTGACTAAAACACACACTTAAAT 57.609 29.630 0.00 0.00 0.00 1.40
1905 1973 1.007580 GGCGTTTTGCTAGAGCCTAC 58.992 55.000 0.00 0.00 45.43 3.18
1909 1977 0.528924 TTTTGCTAGAGCCTACGCGA 59.471 50.000 15.93 0.00 41.18 5.87
1960 2028 9.329913 CTTTTTGAACTATGTTTCTAATCGTGG 57.670 33.333 0.00 0.00 0.00 4.94
2068 2136 4.627467 CGATTGTAGATGCCCTTACATAGC 59.373 45.833 0.00 0.00 0.00 2.97
2071 2139 2.557920 AGATGCCCTTACATAGCTGC 57.442 50.000 0.00 0.00 0.00 5.25
2072 2140 1.072965 AGATGCCCTTACATAGCTGCC 59.927 52.381 0.00 0.00 0.00 4.85
2076 2144 0.250467 CCCTTACATAGCTGCCGCAT 60.250 55.000 2.05 0.00 39.10 4.73
2219 2297 7.931407 GTCAATTTGTTTCACCCCTTATTTCTT 59.069 33.333 0.00 0.00 0.00 2.52
2232 2310 6.381133 CCCCTTATTTCTTAAGCACCTGAATT 59.619 38.462 0.00 0.00 36.71 2.17
2286 2364 8.785329 ATATTGTTTCTGTGTTTGGTTTGTTT 57.215 26.923 0.00 0.00 0.00 2.83
2287 2365 6.532365 TTGTTTCTGTGTTTGGTTTGTTTC 57.468 33.333 0.00 0.00 0.00 2.78
2295 2373 8.091449 TCTGTGTTTGGTTTGTTTCTTTTGTAT 58.909 29.630 0.00 0.00 0.00 2.29
2378 2456 1.425448 CAAACAGGAGGGAGGGAAACT 59.575 52.381 0.00 0.00 0.00 2.66
2493 2571 9.778741 ATTTTGCTAATCCGTATTCTGAATAGA 57.221 29.630 10.26 6.16 0.00 1.98
2529 2607 6.899393 ATTACAATTTGAGCTCAGTTTCCA 57.101 33.333 17.43 0.00 0.00 3.53
3155 3239 6.223852 TGAAGATAAACTTTTCAGAGTCGCT 58.776 36.000 0.00 0.00 39.13 4.93
3158 3242 2.910688 AACTTTTCAGAGTCGCTGGA 57.089 45.000 3.58 0.00 44.98 3.86
3172 3256 1.751351 CGCTGGACACCTCAGAGAATA 59.249 52.381 0.00 0.00 34.67 1.75
3222 3306 3.392285 CCCATGTGAGACATATTCAGGGA 59.608 47.826 3.90 0.00 38.44 4.20
3247 3331 3.006247 GCAAGTTTAGAGAGCAAGGAGG 58.994 50.000 0.00 0.00 0.00 4.30
3248 3332 3.558109 GCAAGTTTAGAGAGCAAGGAGGT 60.558 47.826 0.00 0.00 0.00 3.85
3285 3369 3.477210 AAGAATAGACCGGATGGAAGC 57.523 47.619 9.46 0.00 39.21 3.86
3495 3579 5.181748 AGTGATTCTGGTGAAACTCATAGC 58.818 41.667 0.00 0.00 36.74 2.97
3735 3819 9.498176 TTCCCTCTTTTCATTGTTAAGTAGTAC 57.502 33.333 0.00 0.00 0.00 2.73
3736 3820 8.877195 TCCCTCTTTTCATTGTTAAGTAGTACT 58.123 33.333 0.00 0.00 0.00 2.73
3737 3821 9.152595 CCCTCTTTTCATTGTTAAGTAGTACTC 57.847 37.037 2.58 0.00 0.00 2.59
3738 3822 9.152595 CCTCTTTTCATTGTTAAGTAGTACTCC 57.847 37.037 2.58 0.00 0.00 3.85
3739 3823 9.152595 CTCTTTTCATTGTTAAGTAGTACTCCC 57.847 37.037 2.58 0.00 0.00 4.30
3740 3824 8.877195 TCTTTTCATTGTTAAGTAGTACTCCCT 58.123 33.333 2.58 0.00 0.00 4.20
3741 3825 9.152595 CTTTTCATTGTTAAGTAGTACTCCCTC 57.847 37.037 2.58 0.00 0.00 4.30
3742 3826 6.786967 TCATTGTTAAGTAGTACTCCCTCC 57.213 41.667 2.58 0.00 0.00 4.30
3743 3827 5.359009 TCATTGTTAAGTAGTACTCCCTCCG 59.641 44.000 2.58 0.00 0.00 4.63
3744 3828 4.307032 TGTTAAGTAGTACTCCCTCCGT 57.693 45.455 2.58 0.00 0.00 4.69
3745 3829 4.265073 TGTTAAGTAGTACTCCCTCCGTC 58.735 47.826 2.58 0.00 0.00 4.79
3746 3830 2.433662 AAGTAGTACTCCCTCCGTCC 57.566 55.000 2.58 0.00 0.00 4.79
3747 3831 0.179936 AGTAGTACTCCCTCCGTCCG 59.820 60.000 0.00 0.00 0.00 4.79
3748 3832 0.179000 GTAGTACTCCCTCCGTCCGA 59.821 60.000 0.00 0.00 0.00 4.55
3749 3833 0.911769 TAGTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
3750 3834 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
3751 3835 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
3752 3836 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
3753 3837 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
3754 3838 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
3755 3839 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
3756 3840 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
3757 3841 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3758 3842 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3759 3843 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3760 3844 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
3761 3845 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
3762 3846 4.571919 TCCGTCCGAAAATACTTGTCATT 58.428 39.130 0.00 0.00 0.00 2.57
3763 3847 5.722263 TCCGTCCGAAAATACTTGTCATTA 58.278 37.500 0.00 0.00 0.00 1.90
3764 3848 6.164876 TCCGTCCGAAAATACTTGTCATTAA 58.835 36.000 0.00 0.00 0.00 1.40
3765 3849 6.649973 TCCGTCCGAAAATACTTGTCATTAAA 59.350 34.615 0.00 0.00 0.00 1.52
3766 3850 7.172875 TCCGTCCGAAAATACTTGTCATTAAAA 59.827 33.333 0.00 0.00 0.00 1.52
3767 3851 7.966204 CCGTCCGAAAATACTTGTCATTAAAAT 59.034 33.333 0.00 0.00 0.00 1.82
3768 3852 8.785101 CGTCCGAAAATACTTGTCATTAAAATG 58.215 33.333 0.00 0.00 37.75 2.32
3769 3853 9.072294 GTCCGAAAATACTTGTCATTAAAATGG 57.928 33.333 3.00 0.00 37.03 3.16
3770 3854 9.015367 TCCGAAAATACTTGTCATTAAAATGGA 57.985 29.630 3.00 0.00 37.03 3.41
3771 3855 9.801873 CCGAAAATACTTGTCATTAAAATGGAT 57.198 29.630 3.00 0.00 37.03 3.41
3815 3899 8.854614 AACTAAAATATGTCTAGATGCATCCC 57.145 34.615 23.06 9.38 0.00 3.85
3816 3900 7.398024 ACTAAAATATGTCTAGATGCATCCCC 58.602 38.462 23.06 9.04 0.00 4.81
3817 3901 6.460103 AAAATATGTCTAGATGCATCCCCT 57.540 37.500 23.06 7.62 0.00 4.79
3818 3902 6.460103 AAATATGTCTAGATGCATCCCCTT 57.540 37.500 23.06 7.24 0.00 3.95
3819 3903 6.460103 AATATGTCTAGATGCATCCCCTTT 57.540 37.500 23.06 6.85 0.00 3.11
3820 3904 4.803329 ATGTCTAGATGCATCCCCTTTT 57.197 40.909 23.06 6.10 0.00 2.27
3821 3905 5.912149 ATGTCTAGATGCATCCCCTTTTA 57.088 39.130 23.06 6.97 0.00 1.52
3822 3906 5.912149 TGTCTAGATGCATCCCCTTTTAT 57.088 39.130 23.06 4.58 0.00 1.40
3823 3907 5.869579 TGTCTAGATGCATCCCCTTTTATC 58.130 41.667 23.06 5.36 0.00 1.75
3824 3908 5.221925 TGTCTAGATGCATCCCCTTTTATCC 60.222 44.000 23.06 2.63 0.00 2.59
3825 3909 4.913355 TCTAGATGCATCCCCTTTTATCCA 59.087 41.667 23.06 0.00 0.00 3.41
3826 3910 4.754411 AGATGCATCCCCTTTTATCCAT 57.246 40.909 23.06 0.00 0.00 3.41
3827 3911 5.083953 AGATGCATCCCCTTTTATCCATT 57.916 39.130 23.06 0.00 0.00 3.16
3828 3912 5.470501 AGATGCATCCCCTTTTATCCATTT 58.529 37.500 23.06 0.00 0.00 2.32
3829 3913 5.907079 AGATGCATCCCCTTTTATCCATTTT 59.093 36.000 23.06 0.00 0.00 1.82
3830 3914 5.356291 TGCATCCCCTTTTATCCATTTTG 57.644 39.130 0.00 0.00 0.00 2.44
3831 3915 5.028802 TGCATCCCCTTTTATCCATTTTGA 58.971 37.500 0.00 0.00 0.00 2.69
3832 3916 5.666718 TGCATCCCCTTTTATCCATTTTGAT 59.333 36.000 0.00 0.00 0.00 2.57
3833 3917 5.993441 GCATCCCCTTTTATCCATTTTGATG 59.007 40.000 0.00 0.00 0.00 3.07
3834 3918 6.183360 GCATCCCCTTTTATCCATTTTGATGA 60.183 38.462 0.00 0.00 0.00 2.92
3835 3919 6.790232 TCCCCTTTTATCCATTTTGATGAC 57.210 37.500 0.00 0.00 0.00 3.06
3836 3920 6.259893 TCCCCTTTTATCCATTTTGATGACA 58.740 36.000 0.00 0.00 0.00 3.58
3837 3921 6.728164 TCCCCTTTTATCCATTTTGATGACAA 59.272 34.615 0.00 0.00 0.00 3.18
3838 3922 7.043565 CCCCTTTTATCCATTTTGATGACAAG 58.956 38.462 0.00 0.00 37.32 3.16
3839 3923 7.310609 CCCCTTTTATCCATTTTGATGACAAGT 60.311 37.037 0.00 0.00 37.32 3.16
3840 3924 8.748412 CCCTTTTATCCATTTTGATGACAAGTA 58.252 33.333 0.00 0.00 37.32 2.24
3846 3930 6.851609 TCCATTTTGATGACAAGTATTTCCG 58.148 36.000 0.00 0.00 37.32 4.30
3847 3931 6.035843 CCATTTTGATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 37.32 5.14
3848 3932 6.127758 CCATTTTGATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
3849 3933 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
3850 3934 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
3851 3935 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
3852 3936 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
3853 3937 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
3854 3938 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3855 3939 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3856 3940 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3857 3941 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3858 3942 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3859 3943 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3892 3976 6.381481 GTGAATTCACATTGCCAGATATGA 57.619 37.500 29.43 0.00 45.75 2.15
3898 3982 7.878547 TTCACATTGCCAGATATGATAACAA 57.121 32.000 0.00 0.00 0.00 2.83
3919 4003 8.891671 AACAAATAATTTTTGCATCACTCAGT 57.108 26.923 10.89 0.00 32.93 3.41
3935 4019 0.523072 CAGTGTACATGCTGCCAACC 59.477 55.000 0.00 0.00 0.00 3.77
3941 4025 3.891977 TGTACATGCTGCCAACCTTTTAA 59.108 39.130 0.00 0.00 0.00 1.52
4048 4133 3.917300 ACCCACCTGAACAATAAAACCA 58.083 40.909 0.00 0.00 0.00 3.67
4146 4231 5.685520 TCAATGTGGTACTAGGCAACATA 57.314 39.130 9.19 0.00 41.41 2.29
4155 4240 3.319904 GGCAACATAGCGCCTACG 58.680 61.111 2.29 0.00 45.29 3.51
4196 4281 6.874134 GCTTCCTGTCTAATAAAAGTCACTGA 59.126 38.462 0.00 0.00 0.00 3.41
4237 4322 5.609423 AGAACTAGATAGCCTTTCATGCTG 58.391 41.667 0.00 0.00 39.91 4.41
4249 4334 4.630505 CCTTTCATGCTGATATCATCCTCG 59.369 45.833 5.72 0.00 0.00 4.63
4251 4336 4.446994 TCATGCTGATATCATCCTCGTC 57.553 45.455 5.72 0.00 0.00 4.20
4271 4359 8.021396 CCTCGTCGTGTCATTATAGATCATTAA 58.979 37.037 0.00 0.00 0.00 1.40
4310 4398 6.565234 GCTAACAGCTGAAGTCTACTCAATA 58.435 40.000 23.35 0.00 38.45 1.90
4312 4400 7.381139 GCTAACAGCTGAAGTCTACTCAATATC 59.619 40.741 23.35 0.00 38.45 1.63
4314 4402 8.526667 AACAGCTGAAGTCTACTCAATATCTA 57.473 34.615 23.35 0.00 0.00 1.98
4402 4514 8.981659 TGGTATCTAATCACATAGTCCCATATG 58.018 37.037 0.00 0.00 38.79 1.78
4419 4531 8.021396 GTCCCATATGTCTTCTTTAAAACACAC 58.979 37.037 1.24 0.00 0.00 3.82
4430 4542 7.455641 TCTTTAAAACACACTCCAAACTTGA 57.544 32.000 0.00 0.00 0.00 3.02
4504 4616 5.071250 TGATCCACCTAAATACCGCATAGTT 59.929 40.000 0.00 0.00 0.00 2.24
4521 4633 3.560636 AGTTGACCCACCTGTATATGC 57.439 47.619 0.00 0.00 0.00 3.14
4561 4673 4.993705 TTCATGAAGTGTAGGGGTTTCT 57.006 40.909 3.38 0.00 0.00 2.52
4567 4679 8.607713 TCATGAAGTGTAGGGGTTTCTATTTAA 58.392 33.333 0.00 0.00 0.00 1.52
4607 4719 7.088589 ACACAATTAAGTGCACTGGATAATC 57.911 36.000 22.49 0.00 43.23 1.75
4609 4721 5.207768 CAATTAAGTGCACTGGATAATCGC 58.792 41.667 22.49 0.00 0.00 4.58
4622 4817 6.207810 ACTGGATAATCGCTAAGTAAGAGGAG 59.792 42.308 0.00 0.00 0.00 3.69
4655 4850 3.057596 ACAACATGCCTATGTCCAAAACG 60.058 43.478 0.00 0.00 46.54 3.60
4664 4859 5.065988 GCCTATGTCCAAAACGTCATATGTT 59.934 40.000 1.90 0.00 0.00 2.71
4861 5057 0.400213 TGGACACTAGCACCTTTGGG 59.600 55.000 0.00 0.00 38.88 4.12
4870 5066 5.016831 ACTAGCACCTTTGGGATTTTTAGG 58.983 41.667 0.00 0.00 36.25 2.69
4970 5166 0.037697 CATGAGGTCACGGGTTCGAA 60.038 55.000 0.00 0.00 40.11 3.71
5012 5208 2.041620 AGAAATGTAGGGAAAGGCTGCA 59.958 45.455 0.50 0.00 0.00 4.41
5017 5215 1.138266 GTAGGGAAAGGCTGCATACGA 59.862 52.381 0.50 0.00 0.00 3.43
5045 5243 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
5131 5329 2.922503 TGCGGAGTCCAAGCCTCA 60.923 61.111 10.49 0.00 0.00 3.86
5222 5434 5.175859 TGACTTGATCGGATGGTTAGAAAC 58.824 41.667 0.00 0.00 0.00 2.78
5358 5574 9.645128 ATGAATCCTGTCAAACATGGAATATTA 57.355 29.630 0.00 0.00 32.17 0.98
5427 5643 4.823790 TTACGCACCTTTCTTCCTTTTC 57.176 40.909 0.00 0.00 0.00 2.29
5428 5644 2.932261 ACGCACCTTTCTTCCTTTTCT 58.068 42.857 0.00 0.00 0.00 2.52
5429 5645 4.081322 ACGCACCTTTCTTCCTTTTCTA 57.919 40.909 0.00 0.00 0.00 2.10
5430 5646 4.065789 ACGCACCTTTCTTCCTTTTCTAG 58.934 43.478 0.00 0.00 0.00 2.43
5431 5647 3.437049 CGCACCTTTCTTCCTTTTCTAGG 59.563 47.826 0.00 0.00 46.27 3.02
5432 5648 3.759086 GCACCTTTCTTCCTTTTCTAGGG 59.241 47.826 0.00 0.00 44.86 3.53
5433 5649 4.336280 CACCTTTCTTCCTTTTCTAGGGG 58.664 47.826 0.00 0.00 44.86 4.79
5434 5650 3.988186 ACCTTTCTTCCTTTTCTAGGGGT 59.012 43.478 0.00 0.00 44.86 4.95
5435 5651 4.419200 ACCTTTCTTCCTTTTCTAGGGGTT 59.581 41.667 0.00 0.00 44.86 4.11
5436 5652 4.767409 CCTTTCTTCCTTTTCTAGGGGTTG 59.233 45.833 0.00 0.00 44.86 3.77
5437 5653 5.386060 CTTTCTTCCTTTTCTAGGGGTTGT 58.614 41.667 0.00 0.00 44.86 3.32
5438 5654 5.397553 TTCTTCCTTTTCTAGGGGTTGTT 57.602 39.130 0.00 0.00 44.86 2.83
5439 5655 5.397553 TCTTCCTTTTCTAGGGGTTGTTT 57.602 39.130 0.00 0.00 44.86 2.83
5440 5656 5.137551 TCTTCCTTTTCTAGGGGTTGTTTG 58.862 41.667 0.00 0.00 44.86 2.93
5441 5657 3.839778 TCCTTTTCTAGGGGTTGTTTGG 58.160 45.455 0.00 0.00 44.86 3.28
5442 5658 3.205733 TCCTTTTCTAGGGGTTGTTTGGT 59.794 43.478 0.00 0.00 44.86 3.67
5443 5659 3.964688 CCTTTTCTAGGGGTTGTTTGGTT 59.035 43.478 0.00 0.00 40.67 3.67
5444 5660 4.202212 CCTTTTCTAGGGGTTGTTTGGTTG 60.202 45.833 0.00 0.00 40.67 3.77
5445 5661 2.668144 TCTAGGGGTTGTTTGGTTGG 57.332 50.000 0.00 0.00 0.00 3.77
5446 5662 1.146152 TCTAGGGGTTGTTTGGTTGGG 59.854 52.381 0.00 0.00 0.00 4.12
5447 5663 1.146152 CTAGGGGTTGTTTGGTTGGGA 59.854 52.381 0.00 0.00 0.00 4.37
5448 5664 0.565674 AGGGGTTGTTTGGTTGGGAT 59.434 50.000 0.00 0.00 0.00 3.85
5449 5665 1.061735 AGGGGTTGTTTGGTTGGGATT 60.062 47.619 0.00 0.00 0.00 3.01
5450 5666 1.346395 GGGGTTGTTTGGTTGGGATTC 59.654 52.381 0.00 0.00 0.00 2.52
5451 5667 1.346395 GGGTTGTTTGGTTGGGATTCC 59.654 52.381 0.00 0.00 0.00 3.01
5452 5668 2.325484 GGTTGTTTGGTTGGGATTCCT 58.675 47.619 2.01 0.00 0.00 3.36
5453 5669 2.037121 GGTTGTTTGGTTGGGATTCCTG 59.963 50.000 2.01 0.00 0.00 3.86
5454 5670 1.337118 TGTTTGGTTGGGATTCCTGC 58.663 50.000 2.01 0.00 0.00 4.85
5455 5671 0.608130 GTTTGGTTGGGATTCCTGCC 59.392 55.000 2.01 3.54 0.00 4.85
5456 5672 0.189574 TTTGGTTGGGATTCCTGCCA 59.810 50.000 2.01 6.06 41.80 4.92
5457 5673 0.251742 TTGGTTGGGATTCCTGCCAG 60.252 55.000 2.01 0.00 44.53 4.85
5458 5674 2.054453 GGTTGGGATTCCTGCCAGC 61.054 63.158 2.01 0.00 44.53 4.85
5459 5675 1.000396 GTTGGGATTCCTGCCAGCT 60.000 57.895 2.01 0.00 44.53 4.24
5460 5676 0.613012 GTTGGGATTCCTGCCAGCTT 60.613 55.000 2.01 0.00 44.53 3.74
5461 5677 0.114954 TTGGGATTCCTGCCAGCTTT 59.885 50.000 2.01 0.00 44.53 3.51
5462 5678 0.323725 TGGGATTCCTGCCAGCTTTC 60.324 55.000 2.01 0.00 38.07 2.62
5463 5679 1.379642 GGGATTCCTGCCAGCTTTCG 61.380 60.000 2.01 0.00 31.98 3.46
5464 5680 1.379642 GGATTCCTGCCAGCTTTCGG 61.380 60.000 0.00 0.00 0.00 4.30
5488 5704 2.881352 GCTTCGAGCCGGAAGTCG 60.881 66.667 5.05 10.61 44.17 4.18
5489 5705 2.875485 CTTCGAGCCGGAAGTCGA 59.125 61.111 17.10 17.10 43.25 4.20
5491 5707 3.357919 TCGAGCCGGAAGTCGAAA 58.642 55.556 18.30 1.10 42.05 3.46
5492 5708 1.211969 TCGAGCCGGAAGTCGAAAG 59.788 57.895 18.30 0.00 42.05 2.62
5493 5709 2.445438 CGAGCCGGAAGTCGAAAGC 61.445 63.158 5.05 0.00 42.43 3.51
5494 5710 1.079750 GAGCCGGAAGTCGAAAGCT 60.080 57.895 5.05 0.00 42.43 3.74
5495 5711 1.355066 GAGCCGGAAGTCGAAAGCTG 61.355 60.000 5.05 0.00 42.43 4.24
5496 5712 2.391389 GCCGGAAGTCGAAAGCTGG 61.391 63.158 5.05 0.00 42.43 4.85
5497 5713 2.391389 CCGGAAGTCGAAAGCTGGC 61.391 63.158 0.00 0.00 42.43 4.85
5498 5714 1.667830 CGGAAGTCGAAAGCTGGCA 60.668 57.895 0.00 0.00 42.43 4.92
5499 5715 1.630244 CGGAAGTCGAAAGCTGGCAG 61.630 60.000 10.94 10.94 42.43 4.85
5500 5716 1.301677 GGAAGTCGAAAGCTGGCAGG 61.302 60.000 17.64 0.00 0.00 4.85
5501 5717 0.320771 GAAGTCGAAAGCTGGCAGGA 60.321 55.000 17.64 1.01 0.00 3.86
5502 5718 0.108585 AAGTCGAAAGCTGGCAGGAA 59.891 50.000 17.64 0.00 0.00 3.36
5503 5719 0.326264 AGTCGAAAGCTGGCAGGAAT 59.674 50.000 17.64 0.36 0.00 3.01
5504 5720 0.729690 GTCGAAAGCTGGCAGGAATC 59.270 55.000 17.64 0.00 0.00 2.52
5505 5721 0.392998 TCGAAAGCTGGCAGGAATCC 60.393 55.000 17.64 0.00 0.00 3.01
5506 5722 1.379642 CGAAAGCTGGCAGGAATCCC 61.380 60.000 17.64 0.00 0.00 3.85
5507 5723 0.323725 GAAAGCTGGCAGGAATCCCA 60.324 55.000 17.64 0.00 33.88 4.37
5508 5724 0.114954 AAAGCTGGCAGGAATCCCAA 59.885 50.000 17.64 0.00 33.88 4.12
5509 5725 0.613012 AAGCTGGCAGGAATCCCAAC 60.613 55.000 17.64 0.00 33.88 3.77
5510 5726 2.054453 GCTGGCAGGAATCCCAACC 61.054 63.158 17.64 0.00 33.88 3.77
5511 5727 1.383799 CTGGCAGGAATCCCAACCA 59.616 57.895 6.61 0.10 37.35 3.67
5512 5728 0.251742 CTGGCAGGAATCCCAACCAA 60.252 55.000 6.61 0.00 38.65 3.67
5513 5729 0.189574 TGGCAGGAATCCCAACCAAA 59.810 50.000 3.36 0.00 36.93 3.28
5514 5730 0.608130 GGCAGGAATCCCAACCAAAC 59.392 55.000 0.00 0.00 33.88 2.93
5515 5731 1.337118 GCAGGAATCCCAACCAAACA 58.663 50.000 0.00 0.00 33.88 2.83
5516 5732 1.691434 GCAGGAATCCCAACCAAACAA 59.309 47.619 0.00 0.00 33.88 2.83
5517 5733 2.547855 GCAGGAATCCCAACCAAACAAC 60.548 50.000 0.00 0.00 33.88 3.32
5518 5734 2.037121 CAGGAATCCCAACCAAACAACC 59.963 50.000 0.00 0.00 33.88 3.77
5519 5735 1.346395 GGAATCCCAACCAAACAACCC 59.654 52.381 0.00 0.00 0.00 4.11
5520 5736 1.346395 GAATCCCAACCAAACAACCCC 59.654 52.381 0.00 0.00 0.00 4.95
5521 5737 0.472925 ATCCCAACCAAACAACCCCC 60.473 55.000 0.00 0.00 0.00 5.40
5562 5778 0.719015 TCTCCCCTTCTCTCCACCAT 59.281 55.000 0.00 0.00 0.00 3.55
5576 5792 5.139727 TCTCCACCATGATTTCAAAACACT 58.860 37.500 0.00 0.00 0.00 3.55
5605 5821 0.393077 AGCTTCACCGTTACTGCACT 59.607 50.000 0.00 0.00 0.00 4.40
5606 5822 0.512952 GCTTCACCGTTACTGCACTG 59.487 55.000 0.00 0.00 0.00 3.66
5630 5846 4.263462 TGTGCACTTCTCTTCCCAATATGT 60.263 41.667 19.41 0.00 0.00 2.29
5653 5869 8.287439 TGTCACCTTAATTTTGAGAAACAAGA 57.713 30.769 0.00 0.00 39.77 3.02
5658 5874 8.414003 ACCTTAATTTTGAGAAACAAGAGAACC 58.586 33.333 0.00 0.00 39.77 3.62
5728 5946 1.211703 ACATCACATCGTGCCCCATTA 59.788 47.619 0.00 0.00 32.98 1.90
5740 5962 4.270008 GTGCCCCATTAGTGTTTCACTAT 58.730 43.478 9.86 0.15 44.85 2.12
5746 5968 6.761714 CCCCATTAGTGTTTCACTATACAGAC 59.238 42.308 9.86 0.00 44.85 3.51
5750 5972 9.639601 CATTAGTGTTTCACTATACAGACAGAA 57.360 33.333 9.86 0.00 44.85 3.02
5752 5974 9.692749 TTAGTGTTTCACTATACAGACAGAAAG 57.307 33.333 9.86 0.00 44.85 2.62
5753 5975 7.952671 AGTGTTTCACTATACAGACAGAAAGA 58.047 34.615 0.27 0.00 43.46 2.52
5754 5976 8.589338 AGTGTTTCACTATACAGACAGAAAGAT 58.411 33.333 0.27 0.00 43.46 2.40
5755 5977 9.209175 GTGTTTCACTATACAGACAGAAAGATT 57.791 33.333 0.00 0.00 0.00 2.40
5756 5978 9.424319 TGTTTCACTATACAGACAGAAAGATTC 57.576 33.333 0.00 0.00 0.00 2.52
5757 5979 9.646427 GTTTCACTATACAGACAGAAAGATTCT 57.354 33.333 0.00 0.00 41.70 2.40
5837 6060 4.750098 GCTAAGCCTTCATTATTACTGCGA 59.250 41.667 0.00 0.00 0.00 5.10
5888 6111 6.693315 TTTTGTTCTAGTTTTCTGTGGAGG 57.307 37.500 0.00 0.00 0.00 4.30
5892 6115 6.891388 TGTTCTAGTTTTCTGTGGAGGTTTA 58.109 36.000 0.00 0.00 0.00 2.01
6054 6278 7.849804 TGATGATGATGATGATGATGATGAC 57.150 36.000 0.00 0.00 0.00 3.06
6063 6287 6.228258 TGATGATGATGATGACGACAATGAT 58.772 36.000 0.00 0.00 0.00 2.45
6087 6311 4.154918 GTGGCCTATTCTGCTTATATGCAC 59.845 45.833 9.11 0.00 38.12 4.57
6093 6317 7.121168 GCCTATTCTGCTTATATGCACCAATTA 59.879 37.037 9.11 0.52 38.12 1.40
6259 6483 6.014242 TCTCATGAAAGGATCTGTGTACAACT 60.014 38.462 0.00 0.00 0.00 3.16
6310 6534 1.372582 GCAGACATCCGATCAGCAAA 58.627 50.000 0.00 0.00 0.00 3.68
6633 6857 5.396660 GGGCCCAATGTTGTTTGATATTGAT 60.397 40.000 19.95 0.00 31.96 2.57
6720 6944 2.104451 TGGCAAAGCAATTGTTGGACAT 59.896 40.909 7.40 0.00 41.32 3.06
6759 6983 6.814954 ATACTTGTAGATGGTTCCACTGAT 57.185 37.500 0.00 0.00 0.00 2.90
6813 7037 2.345244 AGCACAGGAGCTCCAACG 59.655 61.111 33.90 22.96 42.18 4.10
6886 7110 2.874701 CCTTTAGGAGCATCAATGGACG 59.125 50.000 0.00 0.00 36.25 4.79
6946 7170 7.139392 GGAAATGAAACCAGTCTTCAGTAAAC 58.861 38.462 0.00 0.00 36.30 2.01
6952 7176 4.950050 ACCAGTCTTCAGTAAACACTCAG 58.050 43.478 0.00 0.00 0.00 3.35
7080 7313 4.377098 AGAAGGTCAGAACCCTCTCTTCG 61.377 52.174 0.00 0.00 41.70 3.79
7114 7347 2.898920 AAGGCATCATGGAGGTGGCG 62.899 60.000 0.00 0.00 42.54 5.69
7169 7402 1.806542 CGGTGACTTGATCAAACCAGG 59.193 52.381 21.93 8.83 39.72 4.45
7436 7669 1.776662 TAACTCAGGGATAGCTGCGT 58.223 50.000 0.00 0.00 0.00 5.24
7520 7753 4.133078 GGAGGTTGAGATCAATTAGGCTG 58.867 47.826 0.00 0.00 38.24 4.85
7718 7951 7.320399 TCGTAATGTAGTCAATAGGCCATATG 58.680 38.462 5.01 0.00 0.00 1.78
7768 8001 9.381033 CTCAATTGTATTCTCACAAAGATCTCT 57.619 33.333 5.13 0.00 41.50 3.10
7807 8042 3.028850 TGGTTAATAGGTCCTCCGACTG 58.971 50.000 0.00 0.00 39.15 3.51
7808 8043 3.029570 GGTTAATAGGTCCTCCGACTGT 58.970 50.000 0.00 0.00 39.15 3.55
7940 8177 9.725019 TGTTTAGTTCATGTATTCACTCTGATT 57.275 29.630 0.00 0.00 0.00 2.57
7942 8179 9.942850 TTTAGTTCATGTATTCACTCTGATTGA 57.057 29.630 0.00 0.00 0.00 2.57
7966 8203 3.360249 ACATTTCAAGCTGCAGTGTTC 57.640 42.857 16.64 0.00 0.00 3.18
7984 8222 6.016777 CAGTGTTCTGCTCTTTATCAAACCTT 60.017 38.462 0.00 0.00 34.79 3.50
7985 8223 6.547510 AGTGTTCTGCTCTTTATCAAACCTTT 59.452 34.615 0.00 0.00 0.00 3.11
8058 11119 1.908066 GCCGCTACAAACTCCAACCG 61.908 60.000 0.00 0.00 0.00 4.44
8121 11182 5.189934 ACCCAAATTTACAAAACTGGGACAA 59.810 36.000 22.19 0.00 42.32 3.18
8190 11251 2.045926 CCAGGCTGGAAACCCTCG 60.046 66.667 29.96 0.00 40.96 4.63
8226 11290 6.442952 CAAAATAGAAACATGACCGGTTCAA 58.557 36.000 9.42 0.00 37.92 2.69
8229 11293 3.551846 AGAAACATGACCGGTTCAAACT 58.448 40.909 9.42 0.00 37.92 2.66
8236 11300 5.125739 ACATGACCGGTTCAAACTAACAAAA 59.874 36.000 9.42 0.00 37.92 2.44
8237 11301 5.640189 TGACCGGTTCAAACTAACAAAAA 57.360 34.783 9.42 0.00 0.00 1.94
8238 11302 5.642686 TGACCGGTTCAAACTAACAAAAAG 58.357 37.500 9.42 0.00 0.00 2.27
8239 11303 5.183522 TGACCGGTTCAAACTAACAAAAAGT 59.816 36.000 9.42 0.00 0.00 2.66
8258 11322 8.499162 CAAAAAGTCTAGAACTACCATGACAAG 58.501 37.037 0.00 0.00 37.17 3.16
8270 11334 2.156917 CATGACAAGAAGGAAGCAGCA 58.843 47.619 0.00 0.00 0.00 4.41
8289 11353 0.964700 AGGGCAAAAGAAGCTTCAGC 59.035 50.000 27.57 22.50 42.49 4.26
8290 11354 0.037882 GGGCAAAAGAAGCTTCAGCC 60.038 55.000 29.03 29.03 43.38 4.85
8333 11397 6.678164 GCACTAGTCACGAGATCTACAATCAA 60.678 42.308 0.00 0.00 0.00 2.57
8356 11420 1.424493 CCAATCCGAAGCACTCTCGC 61.424 60.000 0.00 0.00 0.00 5.03
8383 11447 2.573462 AGCCTTGTGATGCCCGATATAT 59.427 45.455 0.00 0.00 0.00 0.86
8384 11448 3.774766 AGCCTTGTGATGCCCGATATATA 59.225 43.478 0.00 0.00 0.00 0.86
8385 11449 4.410228 AGCCTTGTGATGCCCGATATATAT 59.590 41.667 0.00 0.00 0.00 0.86
8386 11450 5.602561 AGCCTTGTGATGCCCGATATATATA 59.397 40.000 0.00 0.00 0.00 0.86
8401 11465 7.255520 CCGATATATATACCTCACTTGCTACCC 60.256 44.444 0.00 0.00 0.00 3.69
8413 11477 0.464916 TGCTACCCGCTCGATGAGTA 60.465 55.000 0.00 0.00 40.11 2.59
8420 11484 0.946221 CGCTCGATGAGTATTGCCCC 60.946 60.000 0.00 0.00 31.39 5.80
8441 11505 2.229792 CAGCTTTAGCACCCTTTGTCA 58.770 47.619 4.33 0.00 45.16 3.58
8481 11551 4.327680 AGATAGACCAGTTCCAAAAGCAC 58.672 43.478 0.00 0.00 0.00 4.40
8505 11575 5.039920 TCAGTTTGATCATAGTCATGGGG 57.960 43.478 0.00 0.00 32.61 4.96
8511 11581 5.808366 TGATCATAGTCATGGGGTTAGAC 57.192 43.478 0.00 0.00 32.61 2.59
8522 11592 6.493166 TCATGGGGTTAGACATGATTTTTCT 58.507 36.000 0.00 0.00 46.05 2.52
8563 11633 2.511659 CGGCATCTCCAAATCATCCAT 58.488 47.619 0.00 0.00 34.01 3.41
8573 11643 6.380560 TCTCCAAATCATCCATAACATTGCAA 59.619 34.615 0.00 0.00 0.00 4.08
8584 11654 0.398381 ACATTGCAACAACCCCCACT 60.398 50.000 0.00 0.00 0.00 4.00
8609 11679 5.183904 AGCACCAATTGTCTATCAAGTTTCC 59.816 40.000 4.43 0.00 39.55 3.13
8614 11684 7.013846 ACCAATTGTCTATCAAGTTTCCGAAAA 59.986 33.333 4.43 0.00 39.55 2.29
8618 11688 6.761312 TGTCTATCAAGTTTCCGAAAACCTA 58.239 36.000 0.00 0.00 44.87 3.08
8626 11696 7.335924 TCAAGTTTCCGAAAACCTATAATCCAG 59.664 37.037 0.00 0.00 44.87 3.86
8627 11697 5.589050 AGTTTCCGAAAACCTATAATCCAGC 59.411 40.000 0.00 0.00 44.87 4.85
8641 11711 8.160106 CCTATAATCCAGCTTCCAAAATACTCT 58.840 37.037 0.00 0.00 0.00 3.24
8682 11752 5.014202 TGGAATTAAGGGCAAAAGTACCTC 58.986 41.667 0.00 0.00 32.29 3.85
8721 11791 3.773418 ATCTAGCAGCAGAGCATTGAT 57.227 42.857 0.00 0.00 36.85 2.57
8771 11841 4.634004 TGTCCACAGAAAACACAACACTAG 59.366 41.667 0.00 0.00 0.00 2.57
8791 11861 5.845065 ACTAGTACCTTTCCAACCTCTTCTT 59.155 40.000 0.00 0.00 0.00 2.52
8867 11937 5.809719 TTGAAGGGATTTTTGTTTTGCAC 57.190 34.783 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.371145 GGAGAGTGATAGCGAGCGC 60.371 63.158 6.78 6.78 42.33 5.92
1 2 1.169661 AGGGAGAGTGATAGCGAGCG 61.170 60.000 0.00 0.00 0.00 5.03
2 3 0.596082 GAGGGAGAGTGATAGCGAGC 59.404 60.000 0.00 0.00 0.00 5.03
3 4 1.243902 GGAGGGAGAGTGATAGCGAG 58.756 60.000 0.00 0.00 0.00 5.03
4 5 0.178987 GGGAGGGAGAGTGATAGCGA 60.179 60.000 0.00 0.00 0.00 4.93
5 6 0.468214 TGGGAGGGAGAGTGATAGCG 60.468 60.000 0.00 0.00 0.00 4.26
6 7 1.622811 CATGGGAGGGAGAGTGATAGC 59.377 57.143 0.00 0.00 0.00 2.97
24 25 0.179037 CCCCTCACATCATCGCACAT 60.179 55.000 0.00 0.00 0.00 3.21
45 46 2.370633 GAGCCCTCCCTCCTCCTT 59.629 66.667 0.00 0.00 0.00 3.36
60 61 0.249238 CTTTGATCCCTCCTCGCGAG 60.249 60.000 29.06 29.06 38.46 5.03
68 69 2.517166 GCCCCGCTTTGATCCCTC 60.517 66.667 0.00 0.00 0.00 4.30
136 138 4.208686 GACTAGCGTCAGCCCCCG 62.209 72.222 0.00 0.00 46.67 5.73
142 144 0.097325 GGTCAGTCGACTAGCGTCAG 59.903 60.000 19.57 3.94 42.21 3.51
145 148 0.036199 AGAGGTCAGTCGACTAGCGT 60.036 55.000 19.57 14.83 42.21 5.07
149 152 2.236644 AGCACTAGAGGTCAGTCGACTA 59.763 50.000 19.57 4.15 42.21 2.59
157 160 0.545309 AAGGGCAGCACTAGAGGTCA 60.545 55.000 0.00 0.00 0.00 4.02
159 162 1.068121 AAAAGGGCAGCACTAGAGGT 58.932 50.000 0.00 0.00 0.00 3.85
160 163 2.206576 AAAAAGGGCAGCACTAGAGG 57.793 50.000 0.00 0.00 0.00 3.69
161 164 3.879892 GGATAAAAAGGGCAGCACTAGAG 59.120 47.826 0.00 0.00 0.00 2.43
165 168 1.004277 TCGGATAAAAAGGGCAGCACT 59.996 47.619 0.00 0.00 0.00 4.40
170 173 1.356398 AGGGTTCGGATAAAAAGGGCA 59.644 47.619 0.00 0.00 0.00 5.36
210 213 6.398918 TCAGATAAAAAGGACAGCACTAGAC 58.601 40.000 0.00 0.00 0.00 2.59
216 219 3.758554 GGCTTCAGATAAAAAGGACAGCA 59.241 43.478 0.00 0.00 0.00 4.41
219 222 4.761739 CACAGGCTTCAGATAAAAAGGACA 59.238 41.667 0.00 0.00 0.00 4.02
222 225 5.355350 CCTACACAGGCTTCAGATAAAAAGG 59.645 44.000 0.00 0.00 34.35 3.11
252 255 1.479389 CCCTCACTTGCCCTTTGAACT 60.479 52.381 0.00 0.00 0.00 3.01
254 257 0.178964 CCCCTCACTTGCCCTTTGAA 60.179 55.000 0.00 0.00 0.00 2.69
256 259 0.895559 GACCCCTCACTTGCCCTTTG 60.896 60.000 0.00 0.00 0.00 2.77
258 261 2.539081 GGACCCCTCACTTGCCCTT 61.539 63.158 0.00 0.00 0.00 3.95
263 266 1.302511 CAACCGGACCCCTCACTTG 60.303 63.158 9.46 0.00 0.00 3.16
264 267 0.472352 TACAACCGGACCCCTCACTT 60.472 55.000 9.46 0.00 0.00 3.16
266 269 0.901580 TCTACAACCGGACCCCTCAC 60.902 60.000 9.46 0.00 0.00 3.51
267 270 0.042131 ATCTACAACCGGACCCCTCA 59.958 55.000 9.46 0.00 0.00 3.86
270 273 1.070289 GATCATCTACAACCGGACCCC 59.930 57.143 9.46 0.00 0.00 4.95
295 298 9.866936 GTTATGACACGAACAATTACAAGTAAA 57.133 29.630 0.00 0.00 0.00 2.01
312 325 1.387756 GGTACACGCACGTTATGACAC 59.612 52.381 0.00 0.00 0.00 3.67
336 349 0.701731 TCCGGGTTTCCACATGGATT 59.298 50.000 0.00 0.00 44.98 3.01
701 749 3.775654 CTGTCCTCCACCCTCGGC 61.776 72.222 0.00 0.00 0.00 5.54
703 751 2.037367 TCCTGTCCTCCACCCTCG 59.963 66.667 0.00 0.00 0.00 4.63
716 764 3.151022 GTCGCCCTCCCTCTCCTG 61.151 72.222 0.00 0.00 0.00 3.86
734 782 4.517703 CTCGTCGTCCTCGTCGCC 62.518 72.222 0.00 0.00 44.86 5.54
735 783 4.517703 CCTCGTCGTCCTCGTCGC 62.518 72.222 0.00 0.00 44.86 5.19
736 784 2.800581 CTCCTCGTCGTCCTCGTCG 61.801 68.421 0.00 1.62 46.06 5.12
737 785 2.462782 CCTCCTCGTCGTCCTCGTC 61.463 68.421 0.00 0.00 38.33 4.20
738 786 2.436292 CCTCCTCGTCGTCCTCGT 60.436 66.667 0.00 0.00 38.33 4.18
739 787 3.878519 GCCTCCTCGTCGTCCTCG 61.879 72.222 0.00 0.00 38.55 4.63
740 788 3.519930 GGCCTCCTCGTCGTCCTC 61.520 72.222 0.00 0.00 0.00 3.71
760 808 2.284405 TTCTCCCACGGGACTCCC 60.284 66.667 3.63 3.63 39.76 4.30
887 935 1.610624 GCCTTCCATTCAAGTCACGGA 60.611 52.381 0.00 0.00 0.00 4.69
1247 1296 3.833070 AGGGCGTCTTCTTCTTCTTCTTA 59.167 43.478 0.00 0.00 0.00 2.10
1260 1309 0.600255 CGAACTTGACAGGGCGTCTT 60.600 55.000 0.00 0.00 45.60 3.01
1261 1310 1.006102 CGAACTTGACAGGGCGTCT 60.006 57.895 0.00 0.00 45.60 4.18
1262 1311 0.389948 ATCGAACTTGACAGGGCGTC 60.390 55.000 0.00 0.00 45.61 5.19
1263 1312 0.034896 AATCGAACTTGACAGGGCGT 59.965 50.000 0.00 0.00 0.00 5.68
1370 1421 4.842531 TTCATGGAGAAATGCCACTCTA 57.157 40.909 0.00 0.00 38.44 2.43
1383 1434 3.349927 TCAACTGGCTGATTTCATGGAG 58.650 45.455 0.00 0.00 0.00 3.86
1502 1553 2.522185 ACTGGTACCGAGCTTAACAGA 58.478 47.619 14.51 0.00 36.50 3.41
1515 1566 5.629435 GCACAGAAAGCAAATAAACTGGTAC 59.371 40.000 0.00 0.00 0.00 3.34
1564 1615 3.628942 GCCTAATGCATCATGTGAACAGA 59.371 43.478 0.00 0.00 40.77 3.41
1575 1626 2.555757 GTTGGAGATGGCCTAATGCATC 59.444 50.000 3.32 0.00 43.89 3.91
1578 1629 0.947244 CGTTGGAGATGGCCTAATGC 59.053 55.000 3.32 0.00 40.16 3.56
1609 1660 1.772819 ATATTCCCTGGCGCCCTCTG 61.773 60.000 26.77 11.42 0.00 3.35
1667 1718 3.028130 CGCAATGCCGCATCAGAT 58.972 55.556 6.27 0.00 0.00 2.90
1733 1785 6.395629 ACACAAGTAGAAATAGCGCTTCTTA 58.604 36.000 18.68 0.00 34.90 2.10
1808 1864 0.385098 GCGCTGGGAAAACGTACAAC 60.385 55.000 0.00 0.00 0.00 3.32
1848 1904 8.026607 GTGCCATAATTGTATTTAAGTGTGTGT 58.973 33.333 0.00 0.00 0.00 3.72
1850 1906 8.116651 TGTGCCATAATTGTATTTAAGTGTGT 57.883 30.769 0.00 0.00 0.00 3.72
1861 1925 4.854399 GCGCTTAATGTGCCATAATTGTA 58.146 39.130 0.00 0.00 45.73 2.41
1882 1947 0.653114 GCTCTAGCAAAACGCCTAGC 59.347 55.000 0.00 0.00 44.04 3.42
1909 1977 1.522569 CTAGGCGGGCACTTAAGCT 59.477 57.895 1.29 0.00 34.17 3.74
1960 2028 0.867329 CGCTAACCGCCGGTACTAAC 60.867 60.000 10.30 0.00 33.12 2.34
2068 2136 2.068837 ACAATTTGAACATGCGGCAG 57.931 45.000 9.25 3.35 0.00 4.85
2108 2184 6.909550 ACAGGATACAATTAAAAACAGCCA 57.090 33.333 0.00 0.00 41.41 4.75
2187 2263 4.990426 GGGGTGAAACAAATTGACATCAAG 59.010 41.667 0.00 0.00 39.98 3.02
2194 2271 7.610580 AGAAATAAGGGGTGAAACAAATTGA 57.389 32.000 0.00 0.00 39.98 2.57
2255 2333 9.912634 AACCAAACACAGAAACAATATATGAAG 57.087 29.630 0.00 0.00 0.00 3.02
2311 2389 9.982291 TTCTATGAGATACGCAAACAAATAAAC 57.018 29.630 0.00 0.00 0.00 2.01
2437 2515 7.648142 AGTTTGCGACTTTTCAAGAAATATGA 58.352 30.769 0.00 0.00 33.92 2.15
2493 2571 9.533253 GCTCAAATTGTAATAAATATGTGGCTT 57.467 29.630 0.00 0.00 0.00 4.35
2512 2590 4.723309 AGAACTGGAAACTGAGCTCAAAT 58.277 39.130 18.85 6.07 0.00 2.32
2529 2607 2.567615 ACAGTCCCAGCGAAATAGAACT 59.432 45.455 0.00 0.00 0.00 3.01
2583 2661 5.726793 AGTACATGGGGAAAGAACATAGAGT 59.273 40.000 0.00 0.00 0.00 3.24
2584 2662 6.127054 TGAGTACATGGGGAAAGAACATAGAG 60.127 42.308 0.00 0.00 0.00 2.43
2585 2663 5.724370 TGAGTACATGGGGAAAGAACATAGA 59.276 40.000 0.00 0.00 0.00 1.98
2586 2664 5.989477 TGAGTACATGGGGAAAGAACATAG 58.011 41.667 0.00 0.00 0.00 2.23
2950 3034 8.052748 ACATCCCATTTAAGTAACTGAAGCATA 58.947 33.333 0.00 0.00 0.00 3.14
2953 3037 6.759497 ACATCCCATTTAAGTAACTGAAGC 57.241 37.500 0.00 0.00 0.00 3.86
2957 3041 8.924511 ATCCATACATCCCATTTAAGTAACTG 57.075 34.615 0.00 0.00 0.00 3.16
2970 3054 7.497249 GTCAGCTTTATCATATCCATACATCCC 59.503 40.741 0.00 0.00 0.00 3.85
3155 3239 6.841229 ACTGATAATATTCTCTGAGGTGTCCA 59.159 38.462 12.67 0.00 0.00 4.02
3158 3242 8.643324 GGTTACTGATAATATTCTCTGAGGTGT 58.357 37.037 12.67 0.00 0.00 4.16
3172 3256 7.200434 AGTCTCCAATGTGGTTACTGATAAT 57.800 36.000 0.00 0.00 39.03 1.28
3222 3306 3.307339 CCTTGCTCTCTAAACTTGCTCCT 60.307 47.826 0.00 0.00 0.00 3.69
3274 3358 0.529773 TCGAAATCGCTTCCATCCGG 60.530 55.000 0.00 0.00 39.60 5.14
3357 3441 3.121030 GGCGAGTGCTGCGTCAAT 61.121 61.111 0.00 0.00 42.25 2.57
3495 3579 5.674525 TGAGCAGAAGGTAAATCACTATGG 58.325 41.667 0.00 0.00 0.00 2.74
3735 3819 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
3736 3820 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
3737 3821 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3738 3822 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3739 3823 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
3740 3824 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
3741 3825 4.939509 AATGACAAGTATTTTCGGACGG 57.060 40.909 0.00 0.00 0.00 4.79
3742 3826 8.785101 CATTTTAATGACAAGTATTTTCGGACG 58.215 33.333 0.00 0.00 38.70 4.79
3743 3827 9.072294 CCATTTTAATGACAAGTATTTTCGGAC 57.928 33.333 4.07 0.00 38.70 4.79
3744 3828 9.015367 TCCATTTTAATGACAAGTATTTTCGGA 57.985 29.630 4.07 0.00 38.70 4.55
3745 3829 9.801873 ATCCATTTTAATGACAAGTATTTTCGG 57.198 29.630 4.07 0.00 38.70 4.30
3789 3873 9.289782 GGGATGCATCTAGACATATTTTAGTTT 57.710 33.333 25.28 0.00 0.00 2.66
3790 3874 7.885399 GGGGATGCATCTAGACATATTTTAGTT 59.115 37.037 25.28 0.00 0.00 2.24
3791 3875 7.238514 AGGGGATGCATCTAGACATATTTTAGT 59.761 37.037 25.28 0.00 0.00 2.24
3792 3876 7.628234 AGGGGATGCATCTAGACATATTTTAG 58.372 38.462 25.28 0.00 0.00 1.85
3793 3877 7.574021 AGGGGATGCATCTAGACATATTTTA 57.426 36.000 25.28 0.00 0.00 1.52
3794 3878 6.460103 AGGGGATGCATCTAGACATATTTT 57.540 37.500 25.28 0.00 0.00 1.82
3795 3879 6.460103 AAGGGGATGCATCTAGACATATTT 57.540 37.500 25.28 5.75 0.00 1.40
3796 3880 6.460103 AAAGGGGATGCATCTAGACATATT 57.540 37.500 25.28 8.12 0.00 1.28
3797 3881 6.460103 AAAAGGGGATGCATCTAGACATAT 57.540 37.500 25.28 3.97 0.00 1.78
3798 3882 5.912149 AAAAGGGGATGCATCTAGACATA 57.088 39.130 25.28 0.00 0.00 2.29
3799 3883 4.803329 AAAAGGGGATGCATCTAGACAT 57.197 40.909 25.28 9.21 0.00 3.06
3800 3884 5.221925 GGATAAAAGGGGATGCATCTAGACA 60.222 44.000 25.28 6.55 0.00 3.41
3801 3885 5.221925 TGGATAAAAGGGGATGCATCTAGAC 60.222 44.000 25.28 13.29 0.00 2.59
3802 3886 4.913355 TGGATAAAAGGGGATGCATCTAGA 59.087 41.667 25.28 0.00 0.00 2.43
3803 3887 5.246981 TGGATAAAAGGGGATGCATCTAG 57.753 43.478 25.28 0.00 0.00 2.43
3804 3888 5.865977 ATGGATAAAAGGGGATGCATCTA 57.134 39.130 25.28 9.84 29.02 1.98
3805 3889 4.754411 ATGGATAAAAGGGGATGCATCT 57.246 40.909 25.28 7.83 29.02 2.90
3806 3890 5.813513 AAATGGATAAAAGGGGATGCATC 57.186 39.130 18.81 18.81 33.50 3.91
3807 3891 5.666718 TCAAAATGGATAAAAGGGGATGCAT 59.333 36.000 0.00 0.00 35.84 3.96
3808 3892 5.028802 TCAAAATGGATAAAAGGGGATGCA 58.971 37.500 0.00 0.00 0.00 3.96
3809 3893 5.612725 TCAAAATGGATAAAAGGGGATGC 57.387 39.130 0.00 0.00 0.00 3.91
3810 3894 7.147689 TGTCATCAAAATGGATAAAAGGGGATG 60.148 37.037 0.00 0.00 33.42 3.51
3811 3895 6.902416 TGTCATCAAAATGGATAAAAGGGGAT 59.098 34.615 0.00 0.00 33.42 3.85
3812 3896 6.259893 TGTCATCAAAATGGATAAAAGGGGA 58.740 36.000 0.00 0.00 33.42 4.81
3813 3897 6.543430 TGTCATCAAAATGGATAAAAGGGG 57.457 37.500 0.00 0.00 33.42 4.79
3814 3898 7.614494 ACTTGTCATCAAAATGGATAAAAGGG 58.386 34.615 0.00 0.00 33.42 3.95
3820 3904 8.620416 CGGAAATACTTGTCATCAAAATGGATA 58.380 33.333 0.00 0.00 33.42 2.59
3821 3905 7.416664 CCGGAAATACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
3822 3906 6.127758 CCGGAAATACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
3823 3907 6.035843 CCGGAAATACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
3824 3908 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
3825 3909 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
3826 3910 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
3827 3911 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
3828 3912 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
3829 3913 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
3830 3914 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
3831 3915 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
3832 3916 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
3833 3917 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3834 3918 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3835 3919 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3836 3920 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3837 3921 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3838 3922 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3839 3923 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3840 3924 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3841 3925 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
3842 3926 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
3843 3927 2.593978 CTACTCCCTCCGTCCGGA 59.406 66.667 0.00 0.00 42.90 5.14
3844 3928 2.518825 CCTACTCCCTCCGTCCGG 60.519 72.222 0.00 0.00 0.00 5.14
3845 3929 1.823041 GTCCTACTCCCTCCGTCCG 60.823 68.421 0.00 0.00 0.00 4.79
3846 3930 0.752376 CAGTCCTACTCCCTCCGTCC 60.752 65.000 0.00 0.00 0.00 4.79
3847 3931 0.034283 ACAGTCCTACTCCCTCCGTC 60.034 60.000 0.00 0.00 0.00 4.79
3848 3932 1.293062 TACAGTCCTACTCCCTCCGT 58.707 55.000 0.00 0.00 0.00 4.69
3849 3933 2.231529 CATACAGTCCTACTCCCTCCG 58.768 57.143 0.00 0.00 0.00 4.63
3850 3934 2.959707 CACATACAGTCCTACTCCCTCC 59.040 54.545 0.00 0.00 0.00 4.30
3851 3935 3.899726 TCACATACAGTCCTACTCCCTC 58.100 50.000 0.00 0.00 0.00 4.30
3852 3936 4.332683 TTCACATACAGTCCTACTCCCT 57.667 45.455 0.00 0.00 0.00 4.20
3853 3937 5.128827 TGAATTCACATACAGTCCTACTCCC 59.871 44.000 3.38 0.00 0.00 4.30
3854 3938 6.043411 GTGAATTCACATACAGTCCTACTCC 58.957 44.000 29.43 0.00 45.75 3.85
3898 3982 8.575589 TGTACACTGAGTGATGCAAAAATTATT 58.424 29.630 20.97 0.00 36.96 1.40
3919 4003 1.993956 AAAGGTTGGCAGCATGTACA 58.006 45.000 3.14 0.00 39.31 2.90
3941 4025 7.759489 TTTGGATACTTCAATGCTACAACTT 57.241 32.000 0.00 0.00 37.61 2.66
4094 4179 6.147328 GTCAAAACCGCTTTAGAATAGTCTGT 59.853 38.462 2.23 0.00 35.12 3.41
4146 4231 4.436998 GGCAGACACGTAGGCGCT 62.437 66.667 7.64 0.00 42.83 5.92
4237 4322 3.898517 TGACACGACGAGGATGATATC 57.101 47.619 0.00 0.00 0.00 1.63
4271 4359 3.221771 TGTTAGCTGCACCTTTTGACAT 58.778 40.909 1.02 0.00 0.00 3.06
4402 4514 7.535997 AGTTTGGAGTGTGTTTTAAAGAAGAC 58.464 34.615 0.00 0.00 0.00 3.01
4419 4531 6.049955 TGGTCTAACCTATCAAGTTTGGAG 57.950 41.667 0.00 0.00 39.58 3.86
4430 4542 2.557869 TGGGCACTTGGTCTAACCTAT 58.442 47.619 0.00 0.00 39.58 2.57
4468 4580 4.437682 AGGTGGATCACAGAAACAGAAA 57.562 40.909 0.00 0.00 35.86 2.52
4504 4616 1.136828 GGGCATATACAGGTGGGTCA 58.863 55.000 0.00 0.00 0.00 4.02
4521 4633 3.760151 TGAATGATTCAAGTGCTCAAGGG 59.240 43.478 5.21 0.00 36.59 3.95
4579 4691 5.126779 TCCAGTGCACTTAATTGTGTTGTA 58.873 37.500 18.94 0.00 39.89 2.41
4588 4700 4.708177 AGCGATTATCCAGTGCACTTAAT 58.292 39.130 18.94 18.37 0.00 1.40
4607 4719 5.502153 ACATGTACTCCTCTTACTTAGCG 57.498 43.478 0.00 0.00 0.00 4.26
4609 4721 7.093902 TGTCCAACATGTACTCCTCTTACTTAG 60.094 40.741 0.00 0.00 0.00 2.18
4655 4850 3.290710 ACTGCCCCATCAAACATATGAC 58.709 45.455 10.38 0.00 30.82 3.06
4695 4890 6.309494 CCATTCGAAACGAGTAATTAGTCACA 59.691 38.462 18.24 0.00 37.14 3.58
4870 5066 5.859648 GTGAGCTCACACTAGTTTCTTCTAC 59.140 44.000 36.23 7.56 45.75 2.59
4970 5166 1.615384 GCAAGAGGCTGTTTCCAGGAT 60.615 52.381 0.00 0.00 39.22 3.24
5012 5208 3.782656 ACCACTTTGGGTCTTTCGTAT 57.217 42.857 0.00 0.00 43.37 3.06
5070 5268 2.033757 AAGGGCAGCTCAGTGCAG 59.966 61.111 0.00 0.00 45.93 4.41
5076 5274 2.884639 GTTTCTTAACAAGGGCAGCTCA 59.115 45.455 0.00 0.00 34.31 4.26
5268 5480 2.168936 TGGTTACACAAGGTGACTCGTT 59.831 45.455 2.98 0.00 42.68 3.85
5270 5482 2.519377 TGGTTACACAAGGTGACTCG 57.481 50.000 2.98 0.00 42.68 4.18
5358 5574 1.001378 GTTCTTGAACCACGCAATGCT 60.001 47.619 2.94 0.00 0.00 3.79
5427 5643 1.146152 TCCCAACCAAACAACCCCTAG 59.854 52.381 0.00 0.00 0.00 3.02
5428 5644 1.232909 TCCCAACCAAACAACCCCTA 58.767 50.000 0.00 0.00 0.00 3.53
5429 5645 0.565674 ATCCCAACCAAACAACCCCT 59.434 50.000 0.00 0.00 0.00 4.79
5430 5646 1.346395 GAATCCCAACCAAACAACCCC 59.654 52.381 0.00 0.00 0.00 4.95
5431 5647 1.346395 GGAATCCCAACCAAACAACCC 59.654 52.381 0.00 0.00 0.00 4.11
5432 5648 2.037121 CAGGAATCCCAACCAAACAACC 59.963 50.000 0.00 0.00 33.88 3.77
5433 5649 2.547855 GCAGGAATCCCAACCAAACAAC 60.548 50.000 0.00 0.00 33.88 3.32
5434 5650 1.691434 GCAGGAATCCCAACCAAACAA 59.309 47.619 0.00 0.00 33.88 2.83
5435 5651 1.337118 GCAGGAATCCCAACCAAACA 58.663 50.000 0.00 0.00 33.88 2.83
5436 5652 0.608130 GGCAGGAATCCCAACCAAAC 59.392 55.000 0.00 0.00 33.88 2.93
5437 5653 0.189574 TGGCAGGAATCCCAACCAAA 59.810 50.000 3.36 0.00 36.93 3.28
5438 5654 0.251742 CTGGCAGGAATCCCAACCAA 60.252 55.000 6.61 0.00 38.65 3.67
5439 5655 1.383799 CTGGCAGGAATCCCAACCA 59.616 57.895 6.61 0.10 37.35 3.67
5440 5656 2.054453 GCTGGCAGGAATCCCAACC 61.054 63.158 17.64 0.00 33.88 3.77
5441 5657 0.613012 AAGCTGGCAGGAATCCCAAC 60.613 55.000 17.64 0.00 33.88 3.77
5442 5658 0.114954 AAAGCTGGCAGGAATCCCAA 59.885 50.000 17.64 0.00 33.88 4.12
5443 5659 0.323725 GAAAGCTGGCAGGAATCCCA 60.324 55.000 17.64 0.00 33.88 4.37
5444 5660 1.379642 CGAAAGCTGGCAGGAATCCC 61.380 60.000 17.64 0.00 0.00 3.85
5445 5661 1.379642 CCGAAAGCTGGCAGGAATCC 61.380 60.000 17.64 0.00 0.00 3.01
5446 5662 2.101700 CCGAAAGCTGGCAGGAATC 58.898 57.895 17.64 0.00 0.00 2.52
5447 5663 4.326255 CCGAAAGCTGGCAGGAAT 57.674 55.556 17.64 0.00 0.00 3.01
5471 5687 2.814183 TTCGACTTCCGGCTCGAAGC 62.814 60.000 20.74 6.29 42.47 3.86
5472 5688 0.388134 TTTCGACTTCCGGCTCGAAG 60.388 55.000 22.37 13.28 46.50 3.79
5473 5689 0.388134 CTTTCGACTTCCGGCTCGAA 60.388 55.000 20.74 20.74 44.90 3.71
5474 5690 1.211969 CTTTCGACTTCCGGCTCGA 59.788 57.895 12.89 12.89 37.14 4.04
5475 5691 2.445438 GCTTTCGACTTCCGGCTCG 61.445 63.158 0.00 2.77 39.14 5.03
5476 5692 1.079750 AGCTTTCGACTTCCGGCTC 60.080 57.895 0.00 0.00 39.14 4.70
5477 5693 1.374758 CAGCTTTCGACTTCCGGCT 60.375 57.895 0.00 0.00 39.14 5.52
5478 5694 2.391389 CCAGCTTTCGACTTCCGGC 61.391 63.158 0.00 0.00 39.14 6.13
5479 5695 2.391389 GCCAGCTTTCGACTTCCGG 61.391 63.158 0.00 0.00 39.14 5.14
5480 5696 1.630244 CTGCCAGCTTTCGACTTCCG 61.630 60.000 0.00 0.00 40.25 4.30
5481 5697 1.301677 CCTGCCAGCTTTCGACTTCC 61.302 60.000 0.00 0.00 0.00 3.46
5482 5698 0.320771 TCCTGCCAGCTTTCGACTTC 60.321 55.000 0.00 0.00 0.00 3.01
5483 5699 0.108585 TTCCTGCCAGCTTTCGACTT 59.891 50.000 0.00 0.00 0.00 3.01
5484 5700 0.326264 ATTCCTGCCAGCTTTCGACT 59.674 50.000 0.00 0.00 0.00 4.18
5485 5701 0.729690 GATTCCTGCCAGCTTTCGAC 59.270 55.000 0.00 0.00 0.00 4.20
5486 5702 0.392998 GGATTCCTGCCAGCTTTCGA 60.393 55.000 0.00 0.00 0.00 3.71
5487 5703 1.379642 GGGATTCCTGCCAGCTTTCG 61.380 60.000 2.01 0.00 31.98 3.46
5488 5704 0.323725 TGGGATTCCTGCCAGCTTTC 60.324 55.000 2.01 0.00 38.07 2.62
5489 5705 0.114954 TTGGGATTCCTGCCAGCTTT 59.885 50.000 2.01 0.00 44.53 3.51
5490 5706 0.613012 GTTGGGATTCCTGCCAGCTT 60.613 55.000 2.01 0.00 44.53 3.74
5491 5707 1.000396 GTTGGGATTCCTGCCAGCT 60.000 57.895 2.01 0.00 44.53 4.24
5492 5708 2.054453 GGTTGGGATTCCTGCCAGC 61.054 63.158 2.01 0.00 44.53 4.85
5493 5709 0.251742 TTGGTTGGGATTCCTGCCAG 60.252 55.000 2.01 0.00 44.53 4.85
5494 5710 0.189574 TTTGGTTGGGATTCCTGCCA 59.810 50.000 2.01 6.06 41.80 4.92
5495 5711 0.608130 GTTTGGTTGGGATTCCTGCC 59.392 55.000 2.01 3.54 0.00 4.85
5496 5712 1.337118 TGTTTGGTTGGGATTCCTGC 58.663 50.000 2.01 0.00 0.00 4.85
5497 5713 2.037121 GGTTGTTTGGTTGGGATTCCTG 59.963 50.000 2.01 0.00 0.00 3.86
5498 5714 2.325484 GGTTGTTTGGTTGGGATTCCT 58.675 47.619 2.01 0.00 0.00 3.36
5499 5715 1.346395 GGGTTGTTTGGTTGGGATTCC 59.654 52.381 0.00 0.00 0.00 3.01
5500 5716 1.346395 GGGGTTGTTTGGTTGGGATTC 59.654 52.381 0.00 0.00 0.00 2.52
5501 5717 1.429930 GGGGTTGTTTGGTTGGGATT 58.570 50.000 0.00 0.00 0.00 3.01
5502 5718 0.472925 GGGGGTTGTTTGGTTGGGAT 60.473 55.000 0.00 0.00 0.00 3.85
5503 5719 1.075151 GGGGGTTGTTTGGTTGGGA 60.075 57.895 0.00 0.00 0.00 4.37
5504 5720 0.188834 TAGGGGGTTGTTTGGTTGGG 59.811 55.000 0.00 0.00 0.00 4.12
5505 5721 1.689813 GTTAGGGGGTTGTTTGGTTGG 59.310 52.381 0.00 0.00 0.00 3.77
5506 5722 2.101750 GTGTTAGGGGGTTGTTTGGTTG 59.898 50.000 0.00 0.00 0.00 3.77
5507 5723 2.292323 TGTGTTAGGGGGTTGTTTGGTT 60.292 45.455 0.00 0.00 0.00 3.67
5508 5724 1.288335 TGTGTTAGGGGGTTGTTTGGT 59.712 47.619 0.00 0.00 0.00 3.67
5509 5725 1.960689 CTGTGTTAGGGGGTTGTTTGG 59.039 52.381 0.00 0.00 0.00 3.28
5510 5726 1.339929 GCTGTGTTAGGGGGTTGTTTG 59.660 52.381 0.00 0.00 0.00 2.93
5511 5727 1.216930 AGCTGTGTTAGGGGGTTGTTT 59.783 47.619 0.00 0.00 0.00 2.83
5512 5728 0.850784 AGCTGTGTTAGGGGGTTGTT 59.149 50.000 0.00 0.00 0.00 2.83
5513 5729 0.110486 CAGCTGTGTTAGGGGGTTGT 59.890 55.000 5.25 0.00 0.00 3.32
5514 5730 0.110486 ACAGCTGTGTTAGGGGGTTG 59.890 55.000 20.97 0.00 30.30 3.77
5515 5731 0.850784 AACAGCTGTGTTAGGGGGTT 59.149 50.000 22.49 0.00 45.48 4.11
5516 5732 2.551996 AACAGCTGTGTTAGGGGGT 58.448 52.632 22.49 0.00 45.48 4.95
5562 5778 7.048629 TGAAGGCAATAGTGTTTTGAAATCA 57.951 32.000 0.00 0.00 0.00 2.57
5576 5792 1.003118 ACGGTGAAGCTGAAGGCAATA 59.997 47.619 0.00 0.00 44.79 1.90
5605 5821 0.836606 TGGGAAGAGAAGTGCACACA 59.163 50.000 21.04 0.00 0.00 3.72
5606 5822 1.967319 TTGGGAAGAGAAGTGCACAC 58.033 50.000 21.04 12.64 0.00 3.82
5630 5846 8.746052 TCTCTTGTTTCTCAAAATTAAGGTGA 57.254 30.769 0.00 0.00 35.48 4.02
6054 6278 3.249320 CAGAATAGGCCACATCATTGTCG 59.751 47.826 5.01 0.00 32.34 4.35
6063 6287 4.202451 TGCATATAAGCAGAATAGGCCACA 60.202 41.667 5.01 0.00 40.11 4.17
6087 6311 7.776969 TCCTCTTCCTCTGATTGATTTAATTGG 59.223 37.037 0.00 0.00 0.00 3.16
6093 6317 5.193325 ACCATCCTCTTCCTCTGATTGATTT 59.807 40.000 0.00 0.00 0.00 2.17
6279 6503 2.948315 GGATGTCTGCCCATTCTCTTTC 59.052 50.000 0.00 0.00 0.00 2.62
6287 6511 0.395686 CTGATCGGATGTCTGCCCAT 59.604 55.000 0.00 0.00 0.00 4.00
6290 6514 0.462581 TTGCTGATCGGATGTCTGCC 60.463 55.000 5.48 0.00 39.08 4.85
6310 6534 5.420104 CCTCTTTGATTTGGTTCCTAAGCAT 59.580 40.000 5.05 0.00 38.87 3.79
6633 6857 0.185901 AGCTGGCTTGGACCTTCAAA 59.814 50.000 0.00 0.00 0.00 2.69
6813 7037 3.127533 CTGCCTGTACGCCAAGCC 61.128 66.667 0.00 0.00 28.79 4.35
6886 7110 3.010413 GCCTGCCTTCATTGCCACC 62.010 63.158 0.00 0.00 0.00 4.61
7114 7347 2.677003 TACGCGGCTTTGCTTGAGC 61.677 57.895 12.47 0.00 42.50 4.26
7436 7669 7.800155 TGATGTTGTCATTACTGTTGAAGAA 57.200 32.000 0.00 0.00 34.06 2.52
7697 7930 7.448469 GGAAACATATGGCCTATTGACTACATT 59.552 37.037 3.32 0.00 0.00 2.71
7718 7951 8.682936 AGGAATTATACATGACATCAGGAAAC 57.317 34.615 0.00 0.00 0.00 2.78
7739 7972 8.868522 ATCTTTGTGAGAATACAATTGAGGAA 57.131 30.769 13.59 0.00 40.00 3.36
7759 7992 8.258007 TCGACCATAAATAACACAGAGATCTTT 58.742 33.333 0.00 0.00 0.00 2.52
7760 7993 7.782049 TCGACCATAAATAACACAGAGATCTT 58.218 34.615 0.00 0.00 0.00 2.40
7768 8001 8.740123 ATTAACCATCGACCATAAATAACACA 57.260 30.769 0.00 0.00 0.00 3.72
7780 8013 3.006644 GGAGGACCTATTAACCATCGACC 59.993 52.174 0.00 0.00 0.00 4.79
7807 8042 9.216117 ACTTACTACACATTCTTCCAAACATAC 57.784 33.333 0.00 0.00 0.00 2.39
7808 8043 9.787435 AACTTACTACACATTCTTCCAAACATA 57.213 29.630 0.00 0.00 0.00 2.29
7911 8148 6.590292 AGAGTGAATACATGAACTAAACACGG 59.410 38.462 0.00 0.00 0.00 4.94
7940 8177 4.074259 ACTGCAGCTTGAAATGTACATCA 58.926 39.130 15.27 1.45 0.00 3.07
7942 8179 3.822735 ACACTGCAGCTTGAAATGTACAT 59.177 39.130 15.27 1.41 0.00 2.29
7943 8180 3.213506 ACACTGCAGCTTGAAATGTACA 58.786 40.909 15.27 0.00 0.00 2.90
7966 8203 8.180267 CAGATGTAAAGGTTTGATAAAGAGCAG 58.820 37.037 0.00 0.00 0.00 4.24
8008 11069 6.421485 AGACCATAAAAAGAGCATCATCAGT 58.579 36.000 0.00 0.00 37.82 3.41
8058 11119 2.586357 GCCTGGTAGCGCTAGTGC 60.586 66.667 19.48 20.73 0.00 4.40
8066 11127 1.177401 CTTCTTTTGGGCCTGGTAGC 58.823 55.000 4.53 0.00 0.00 3.58
8229 11293 9.485206 GTCATGGTAGTTCTAGACTTTTTGTTA 57.515 33.333 0.00 0.00 39.86 2.41
8236 11300 7.310113 CCTTCTTGTCATGGTAGTTCTAGACTT 60.310 40.741 0.00 0.00 39.86 3.01
8237 11301 6.153680 CCTTCTTGTCATGGTAGTTCTAGACT 59.846 42.308 0.00 0.00 42.55 3.24
8238 11302 6.153000 TCCTTCTTGTCATGGTAGTTCTAGAC 59.847 42.308 0.00 0.00 0.00 2.59
8239 11303 6.253758 TCCTTCTTGTCATGGTAGTTCTAGA 58.746 40.000 0.00 0.00 0.00 2.43
8258 11322 1.181098 TTTGCCCTGCTGCTTCCTTC 61.181 55.000 0.00 0.00 0.00 3.46
8270 11334 0.964700 GCTGAAGCTTCTTTTGCCCT 59.035 50.000 26.09 0.00 38.21 5.19
8289 11353 2.938451 TGCTTTGCTACATCATCTTCGG 59.062 45.455 0.00 0.00 0.00 4.30
8290 11354 3.620374 AGTGCTTTGCTACATCATCTTCG 59.380 43.478 0.00 0.00 0.00 3.79
8333 11397 0.321653 GAGTGCTTCGGATTGGTGGT 60.322 55.000 0.00 0.00 0.00 4.16
8356 11420 0.747283 GGCATCACAAGGCTGGAGAG 60.747 60.000 0.00 0.00 31.41 3.20
8401 11465 0.946221 GGGGCAATACTCATCGAGCG 60.946 60.000 0.00 0.00 32.04 5.03
8413 11477 0.972471 GTGCTAAAGCTGGGGGCAAT 60.972 55.000 3.26 0.00 44.79 3.56
8420 11484 1.541588 GACAAAGGGTGCTAAAGCTGG 59.458 52.381 3.26 0.00 42.66 4.85
8441 11505 3.939740 TCTTGCAGATAAAGGAGCCAT 57.060 42.857 0.00 0.00 0.00 4.40
8481 11551 5.472478 CCCCATGACTATGATCAAACTGATG 59.528 44.000 0.00 0.09 37.20 3.07
8537 11607 1.677576 GATTTGGAGATGCCGCAATGA 59.322 47.619 0.00 0.00 40.66 2.57
8544 11614 4.828939 TGTTATGGATGATTTGGAGATGCC 59.171 41.667 0.00 0.00 37.10 4.40
8563 11633 1.689273 GTGGGGGTTGTTGCAATGTTA 59.311 47.619 0.59 0.00 0.00 2.41
8573 11643 1.357272 TTGGTGCTAGTGGGGGTTGT 61.357 55.000 0.00 0.00 0.00 3.32
8584 11654 6.374333 GGAAACTTGATAGACAATTGGTGCTA 59.626 38.462 10.83 8.66 37.88 3.49
8609 11679 5.123227 TGGAAGCTGGATTATAGGTTTTCG 58.877 41.667 0.00 0.00 36.14 3.46
8614 11684 7.816411 AGTATTTTGGAAGCTGGATTATAGGT 58.184 34.615 0.00 0.00 0.00 3.08
8618 11688 8.938883 TCTAGAGTATTTTGGAAGCTGGATTAT 58.061 33.333 0.00 0.00 0.00 1.28
8626 11696 9.601217 TTAATCTGTCTAGAGTATTTTGGAAGC 57.399 33.333 0.00 0.00 33.91 3.86
8641 11711 7.496346 AATTCCACCTCTGTTAATCTGTCTA 57.504 36.000 0.00 0.00 0.00 2.59
8655 11725 3.832490 ACTTTTGCCCTTAATTCCACCTC 59.168 43.478 0.00 0.00 0.00 3.85
8682 11752 7.930325 TGCTAGATTGATTTGGAGTCTTATGAG 59.070 37.037 0.00 0.00 0.00 2.90
8736 11806 7.502226 TGTTTTCTGTGGACAAGTTGAATCTAT 59.498 33.333 10.54 0.00 0.00 1.98
8745 11815 3.823873 TGTTGTGTTTTCTGTGGACAAGT 59.176 39.130 0.00 0.00 0.00 3.16
8771 11841 7.718314 TCTTTTAAGAAGAGGTTGGAAAGGTAC 59.282 37.037 0.00 0.00 30.73 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.