Multiple sequence alignment - TraesCS6B01G290100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G290100 chr6B 100.000 5395 0 0 1 5395 521987318 521992712 0.000000e+00 9963.0
1 TraesCS6B01G290100 chr6B 94.257 2699 133 5 721 3416 667084144 667086823 0.000000e+00 4106.0
2 TraesCS6B01G290100 chr6B 94.421 2402 126 8 724 3124 695470095 695472489 0.000000e+00 3687.0
3 TraesCS6B01G290100 chr6B 93.412 759 28 5 2660 3416 553047216 553047954 0.000000e+00 1105.0
4 TraesCS6B01G290100 chr6B 91.382 673 38 2 2745 3416 114121739 114122392 0.000000e+00 904.0
5 TraesCS6B01G290100 chr6B 90.406 271 25 1 3147 3416 165301055 165301325 6.650000e-94 355.0
6 TraesCS6B01G290100 chr6B 97.101 138 4 0 340 477 60632807 60632670 3.250000e-57 233.0
7 TraesCS6B01G290100 chr4A 93.815 2700 131 11 721 3416 655659008 655656341 0.000000e+00 4028.0
8 TraesCS6B01G290100 chr4A 97.122 139 4 0 337 475 709216559 709216421 9.030000e-58 235.0
9 TraesCS6B01G290100 chr4B 92.728 2709 145 13 721 3411 191192537 191195211 0.000000e+00 3864.0
10 TraesCS6B01G290100 chr4B 92.751 538 19 8 2880 3416 580774204 580774722 0.000000e+00 760.0
11 TraesCS6B01G290100 chr4B 97.619 42 1 0 3409 3450 37311637 37311596 7.500000e-09 73.1
12 TraesCS6B01G290100 chr2B 95.677 2406 92 3 721 3126 507803084 507805477 0.000000e+00 3856.0
13 TraesCS6B01G290100 chr2B 94.262 2405 130 5 724 3125 71377371 71374972 0.000000e+00 3670.0
14 TraesCS6B01G290100 chr2B 94.080 2365 113 15 969 3330 2544876 2547216 0.000000e+00 3567.0
15 TraesCS6B01G290100 chr2B 93.082 1113 56 12 2305 3416 71585666 71586758 0.000000e+00 1609.0
16 TraesCS6B01G290100 chr1B 93.894 2555 130 7 721 3271 572835125 572832593 0.000000e+00 3831.0
17 TraesCS6B01G290100 chr7B 94.944 2413 116 4 719 3126 700439097 700436686 0.000000e+00 3775.0
18 TraesCS6B01G290100 chr7B 91.781 657 31 6 2764 3416 327812288 327811651 0.000000e+00 893.0
19 TraesCS6B01G290100 chr7B 90.642 545 13 6 2888 3416 389009914 389010436 0.000000e+00 689.0
20 TraesCS6B01G290100 chr7B 97.080 137 4 0 340 476 7237636 7237500 1.170000e-56 231.0
21 TraesCS6B01G290100 chr7B 78.947 247 36 10 3171 3412 139098290 139098525 2.600000e-33 154.0
22 TraesCS6B01G290100 chr1D 91.966 2726 151 24 721 3416 19037876 19035189 0.000000e+00 3759.0
23 TraesCS6B01G290100 chr6A 83.251 1015 93 34 3598 4571 486277087 486278065 0.000000e+00 861.0
24 TraesCS6B01G290100 chr6A 83.745 486 47 12 4930 5395 486278339 486278812 1.070000e-116 431.0
25 TraesCS6B01G290100 chr6A 89.894 188 12 2 160 340 486276041 486276228 9.030000e-58 235.0
26 TraesCS6B01G290100 chr6A 97.059 136 4 0 340 475 106697649 106697784 4.200000e-56 230.0
27 TraesCS6B01G290100 chr6A 84.615 208 6 9 4690 4877 486278137 486278338 3.320000e-42 183.0
28 TraesCS6B01G290100 chr6A 87.387 111 8 4 472 581 486276216 486276321 7.340000e-24 122.0
29 TraesCS6B01G290100 chr6D 87.752 743 37 26 4158 4854 345788511 345789245 0.000000e+00 819.0
30 TraesCS6B01G290100 chr6D 87.234 470 27 12 3559 4024 345786037 345786477 6.240000e-139 505.0
31 TraesCS6B01G290100 chr6D 92.038 314 8 4 4852 5162 345789426 345789725 4.990000e-115 425.0
32 TraesCS6B01G290100 chr6D 90.845 284 12 5 19 295 345783373 345783649 8.540000e-98 368.0
33 TraesCS6B01G290100 chr6D 90.476 189 9 5 5210 5395 345789721 345789903 1.940000e-59 241.0
34 TraesCS6B01G290100 chr6D 92.969 128 8 1 4031 4157 345786516 345786643 9.230000e-43 185.0
35 TraesCS6B01G290100 chr6D 90.780 141 5 3 473 611 345783677 345783811 1.190000e-41 182.0
36 TraesCS6B01G290100 chr5D 81.087 460 45 17 2964 3416 421370041 421369617 4.030000e-86 329.0
37 TraesCS6B01G290100 chr3B 97.778 135 3 0 340 474 406551970 406552104 3.250000e-57 233.0
38 TraesCS6B01G290100 chr3B 97.037 135 4 0 340 474 489366384 489366250 1.510000e-55 228.0
39 TraesCS6B01G290100 chr5B 97.080 137 4 0 339 475 73827342 73827478 1.170000e-56 231.0
40 TraesCS6B01G290100 chr1A 94.156 154 5 4 340 493 551481909 551482058 1.170000e-56 231.0
41 TraesCS6B01G290100 chr1A 97.143 35 1 0 3414 3448 518091637 518091671 5.840000e-05 60.2
42 TraesCS6B01G290100 chr5A 97.059 136 4 0 340 475 582620743 582620878 4.200000e-56 230.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G290100 chr6B 521987318 521992712 5394 False 9963.000000 9963 100.000000 1 5395 1 chr6B.!!$F3 5394
1 TraesCS6B01G290100 chr6B 667084144 667086823 2679 False 4106.000000 4106 94.257000 721 3416 1 chr6B.!!$F5 2695
2 TraesCS6B01G290100 chr6B 695470095 695472489 2394 False 3687.000000 3687 94.421000 724 3124 1 chr6B.!!$F6 2400
3 TraesCS6B01G290100 chr6B 553047216 553047954 738 False 1105.000000 1105 93.412000 2660 3416 1 chr6B.!!$F4 756
4 TraesCS6B01G290100 chr6B 114121739 114122392 653 False 904.000000 904 91.382000 2745 3416 1 chr6B.!!$F1 671
5 TraesCS6B01G290100 chr4A 655656341 655659008 2667 True 4028.000000 4028 93.815000 721 3416 1 chr4A.!!$R1 2695
6 TraesCS6B01G290100 chr4B 191192537 191195211 2674 False 3864.000000 3864 92.728000 721 3411 1 chr4B.!!$F1 2690
7 TraesCS6B01G290100 chr4B 580774204 580774722 518 False 760.000000 760 92.751000 2880 3416 1 chr4B.!!$F2 536
8 TraesCS6B01G290100 chr2B 507803084 507805477 2393 False 3856.000000 3856 95.677000 721 3126 1 chr2B.!!$F3 2405
9 TraesCS6B01G290100 chr2B 71374972 71377371 2399 True 3670.000000 3670 94.262000 724 3125 1 chr2B.!!$R1 2401
10 TraesCS6B01G290100 chr2B 2544876 2547216 2340 False 3567.000000 3567 94.080000 969 3330 1 chr2B.!!$F1 2361
11 TraesCS6B01G290100 chr2B 71585666 71586758 1092 False 1609.000000 1609 93.082000 2305 3416 1 chr2B.!!$F2 1111
12 TraesCS6B01G290100 chr1B 572832593 572835125 2532 True 3831.000000 3831 93.894000 721 3271 1 chr1B.!!$R1 2550
13 TraesCS6B01G290100 chr7B 700436686 700439097 2411 True 3775.000000 3775 94.944000 719 3126 1 chr7B.!!$R3 2407
14 TraesCS6B01G290100 chr7B 327811651 327812288 637 True 893.000000 893 91.781000 2764 3416 1 chr7B.!!$R2 652
15 TraesCS6B01G290100 chr7B 389009914 389010436 522 False 689.000000 689 90.642000 2888 3416 1 chr7B.!!$F2 528
16 TraesCS6B01G290100 chr1D 19035189 19037876 2687 True 3759.000000 3759 91.966000 721 3416 1 chr1D.!!$R1 2695
17 TraesCS6B01G290100 chr6A 486276041 486278812 2771 False 366.400000 861 85.778400 160 5395 5 chr6A.!!$F2 5235
18 TraesCS6B01G290100 chr6D 345783373 345789903 6530 False 389.285714 819 90.299143 19 5395 7 chr6D.!!$F1 5376

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
388 396 0.034089 GCCATACCCTGCCTTTGAGT 60.034 55.0 0.00 0.00 0.00 3.41 F
703 711 0.103390 TGAAACTCAAGTGCGACGGA 59.897 50.0 0.00 0.00 0.00 4.69 F
704 712 0.507358 GAAACTCAAGTGCGACGGAC 59.493 55.0 11.99 11.99 0.00 4.79 F
2453 2546 0.173255 CGGTCATCAACAATTGCCCC 59.827 55.0 5.05 0.00 0.00 5.80 F
3416 3538 0.250424 AAACCCTACCCAAACGGACG 60.250 55.0 0.00 0.00 34.64 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1631 1708 0.179040 GTCAAACAAGACACGGGGGA 60.179 55.000 0.00 0.0 38.4 4.81 R
1945 2035 1.543429 CCTCTTCTTTTGTGCCTCGGT 60.543 52.381 0.00 0.0 0.0 4.69 R
2647 2740 1.816863 TTGCCGCTTCTTCTCGTCCT 61.817 55.000 0.00 0.0 0.0 3.85 R
3436 3558 0.331278 CCCACATTAGGCCAACTCCA 59.669 55.000 5.01 0.0 0.0 3.86 R
5174 9934 0.175760 GTTCAGCTGCCCGATCACTA 59.824 55.000 9.47 0.0 0.0 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.943822 GTAAGACCCAGAGCAGGC 57.056 61.111 0.00 0.00 0.00 4.85
46 47 1.225426 GCAGATCAGATGTGCCCCA 59.775 57.895 19.74 0.00 43.11 4.96
101 102 2.646719 CGTCGACCTTCCGTTCCA 59.353 61.111 10.58 0.00 0.00 3.53
110 111 1.680860 CCTTCCGTTCCATTACCACCC 60.681 57.143 0.00 0.00 0.00 4.61
172 180 0.178767 ACAGCAGGATGATTGCGCTA 59.821 50.000 9.73 0.00 45.98 4.26
294 302 1.958205 CTTCGCCCTCGCCATCATC 60.958 63.158 0.00 0.00 35.26 2.92
295 303 3.790334 TTCGCCCTCGCCATCATCG 62.790 63.158 0.00 0.00 35.26 3.84
328 336 4.773117 GTCGTCGCCGGTCTCACC 62.773 72.222 1.90 0.00 34.05 4.02
338 346 4.353437 GTCTCACCCGTCGCGGTT 62.353 66.667 6.13 0.35 46.80 4.44
339 347 4.351938 TCTCACCCGTCGCGGTTG 62.352 66.667 6.13 12.24 46.80 3.77
347 355 4.651008 GTCGCGGTTGGACGTGGA 62.651 66.667 6.13 0.00 43.93 4.02
348 356 3.687102 TCGCGGTTGGACGTGGAT 61.687 61.111 6.13 0.00 43.93 3.41
349 357 3.186047 CGCGGTTGGACGTGGATC 61.186 66.667 0.00 0.00 40.41 3.36
350 358 2.818274 GCGGTTGGACGTGGATCC 60.818 66.667 4.20 4.20 39.45 3.36
351 359 2.978824 CGGTTGGACGTGGATCCT 59.021 61.111 14.23 0.00 39.75 3.24
352 360 1.153628 CGGTTGGACGTGGATCCTC 60.154 63.158 14.23 8.71 39.75 3.71
353 361 1.605058 CGGTTGGACGTGGATCCTCT 61.605 60.000 14.23 0.00 39.75 3.69
354 362 1.481871 GGTTGGACGTGGATCCTCTA 58.518 55.000 14.23 0.00 39.75 2.43
355 363 1.829222 GGTTGGACGTGGATCCTCTAA 59.171 52.381 14.23 3.69 39.75 2.10
356 364 2.418334 GGTTGGACGTGGATCCTCTAAC 60.418 54.545 14.23 15.39 39.75 2.34
357 365 2.496470 GTTGGACGTGGATCCTCTAACT 59.504 50.000 14.23 0.00 39.75 2.24
358 366 2.816411 TGGACGTGGATCCTCTAACTT 58.184 47.619 14.23 0.00 39.75 2.66
359 367 3.170717 TGGACGTGGATCCTCTAACTTT 58.829 45.455 14.23 0.00 39.75 2.66
360 368 3.056107 TGGACGTGGATCCTCTAACTTTG 60.056 47.826 14.23 0.00 39.75 2.77
361 369 2.930682 GACGTGGATCCTCTAACTTTGC 59.069 50.000 14.23 0.00 0.00 3.68
362 370 2.301870 ACGTGGATCCTCTAACTTTGCA 59.698 45.455 14.23 0.00 0.00 4.08
363 371 3.244422 ACGTGGATCCTCTAACTTTGCAA 60.244 43.478 14.23 0.00 0.00 4.08
364 372 3.941483 CGTGGATCCTCTAACTTTGCAAT 59.059 43.478 14.23 0.00 0.00 3.56
365 373 4.034510 CGTGGATCCTCTAACTTTGCAATC 59.965 45.833 14.23 0.00 0.00 2.67
366 374 4.336713 GTGGATCCTCTAACTTTGCAATCC 59.663 45.833 14.23 0.19 33.56 3.01
367 375 3.885901 GGATCCTCTAACTTTGCAATCCC 59.114 47.826 3.84 0.00 0.00 3.85
368 376 4.385754 GGATCCTCTAACTTTGCAATCCCT 60.386 45.833 3.84 0.00 0.00 4.20
369 377 3.955471 TCCTCTAACTTTGCAATCCCTG 58.045 45.455 0.00 0.00 0.00 4.45
377 385 4.181051 GCAATCCCTGCCATACCC 57.819 61.111 0.00 0.00 46.13 3.69
378 386 1.538666 GCAATCCCTGCCATACCCT 59.461 57.895 0.00 0.00 46.13 4.34
379 387 0.825010 GCAATCCCTGCCATACCCTG 60.825 60.000 0.00 0.00 46.13 4.45
380 388 0.825010 CAATCCCTGCCATACCCTGC 60.825 60.000 0.00 0.00 0.00 4.85
381 389 2.011617 AATCCCTGCCATACCCTGCC 62.012 60.000 0.00 0.00 0.00 4.85
382 390 2.940421 ATCCCTGCCATACCCTGCCT 62.940 60.000 0.00 0.00 0.00 4.75
383 391 2.693871 CCCTGCCATACCCTGCCTT 61.694 63.158 0.00 0.00 0.00 4.35
384 392 1.307647 CCTGCCATACCCTGCCTTT 59.692 57.895 0.00 0.00 0.00 3.11
385 393 1.039233 CCTGCCATACCCTGCCTTTG 61.039 60.000 0.00 0.00 0.00 2.77
386 394 0.034186 CTGCCATACCCTGCCTTTGA 60.034 55.000 0.00 0.00 0.00 2.69
387 395 0.034186 TGCCATACCCTGCCTTTGAG 60.034 55.000 0.00 0.00 0.00 3.02
388 396 0.034089 GCCATACCCTGCCTTTGAGT 60.034 55.000 0.00 0.00 0.00 3.41
389 397 2.019156 GCCATACCCTGCCTTTGAGTC 61.019 57.143 0.00 0.00 0.00 3.36
390 398 1.281867 CCATACCCTGCCTTTGAGTCA 59.718 52.381 0.00 0.00 0.00 3.41
391 399 2.359900 CATACCCTGCCTTTGAGTCAC 58.640 52.381 0.00 0.00 0.00 3.67
392 400 1.729586 TACCCTGCCTTTGAGTCACT 58.270 50.000 0.00 0.00 0.00 3.41
393 401 0.109342 ACCCTGCCTTTGAGTCACTG 59.891 55.000 0.00 0.00 0.00 3.66
394 402 0.397941 CCCTGCCTTTGAGTCACTGA 59.602 55.000 0.00 0.00 0.00 3.41
395 403 1.517242 CCTGCCTTTGAGTCACTGAC 58.483 55.000 0.38 0.38 0.00 3.51
396 404 1.202687 CCTGCCTTTGAGTCACTGACA 60.203 52.381 11.80 0.00 34.60 3.58
397 405 2.141517 CTGCCTTTGAGTCACTGACAG 58.858 52.381 11.80 0.00 34.60 3.51
398 406 1.202687 TGCCTTTGAGTCACTGACAGG 60.203 52.381 11.80 9.87 34.60 4.00
399 407 1.202698 GCCTTTGAGTCACTGACAGGT 60.203 52.381 11.80 0.00 34.60 4.00
400 408 2.487934 CCTTTGAGTCACTGACAGGTG 58.512 52.381 11.80 3.26 38.44 4.00
401 409 2.487934 CTTTGAGTCACTGACAGGTGG 58.512 52.381 11.80 0.00 37.75 4.61
402 410 0.758734 TTGAGTCACTGACAGGTGGG 59.241 55.000 11.80 0.00 37.75 4.61
403 411 1.004440 GAGTCACTGACAGGTGGGC 60.004 63.158 11.80 0.00 37.75 5.36
404 412 2.032681 GTCACTGACAGGTGGGCC 59.967 66.667 7.51 0.00 37.75 5.80
406 414 2.217038 TCACTGACAGGTGGGCCTC 61.217 63.158 4.53 0.00 44.97 4.70
407 415 2.122413 ACTGACAGGTGGGCCTCA 60.122 61.111 4.53 0.00 44.97 3.86
408 416 1.539869 ACTGACAGGTGGGCCTCAT 60.540 57.895 4.53 0.00 44.97 2.90
409 417 1.077930 CTGACAGGTGGGCCTCATG 60.078 63.158 17.74 17.74 44.97 3.07
410 418 2.439156 GACAGGTGGGCCTCATGC 60.439 66.667 19.07 9.11 44.97 4.06
411 419 2.937689 ACAGGTGGGCCTCATGCT 60.938 61.111 19.07 5.05 44.97 3.79
412 420 2.357836 CAGGTGGGCCTCATGCTT 59.642 61.111 7.36 0.00 44.97 3.91
413 421 1.304713 CAGGTGGGCCTCATGCTTT 60.305 57.895 7.36 0.00 44.97 3.51
414 422 1.304713 AGGTGGGCCTCATGCTTTG 60.305 57.895 4.53 0.00 42.67 2.77
415 423 1.607467 GGTGGGCCTCATGCTTTGT 60.607 57.895 4.53 0.00 40.92 2.83
416 424 1.588082 GTGGGCCTCATGCTTTGTG 59.412 57.895 4.53 0.00 40.92 3.33
417 425 0.895100 GTGGGCCTCATGCTTTGTGA 60.895 55.000 4.53 0.00 40.92 3.58
418 426 0.609957 TGGGCCTCATGCTTTGTGAG 60.610 55.000 4.53 0.00 42.11 3.51
419 427 0.322816 GGGCCTCATGCTTTGTGAGA 60.323 55.000 0.84 0.00 44.57 3.27
420 428 0.807496 GGCCTCATGCTTTGTGAGAC 59.193 55.000 0.00 0.00 44.57 3.36
421 429 0.807496 GCCTCATGCTTTGTGAGACC 59.193 55.000 4.79 0.00 44.57 3.85
422 430 1.457346 CCTCATGCTTTGTGAGACCC 58.543 55.000 4.79 0.00 44.57 4.46
423 431 1.081892 CTCATGCTTTGTGAGACCCG 58.918 55.000 0.00 0.00 44.57 5.28
424 432 0.396435 TCATGCTTTGTGAGACCCGT 59.604 50.000 0.00 0.00 0.00 5.28
425 433 0.518636 CATGCTTTGTGAGACCCGTG 59.481 55.000 0.00 0.00 0.00 4.94
426 434 0.108585 ATGCTTTGTGAGACCCGTGT 59.891 50.000 0.00 0.00 0.00 4.49
427 435 0.813610 TGCTTTGTGAGACCCGTGTG 60.814 55.000 0.00 0.00 0.00 3.82
428 436 0.814010 GCTTTGTGAGACCCGTGTGT 60.814 55.000 0.00 0.00 0.00 3.72
429 437 1.217882 CTTTGTGAGACCCGTGTGTC 58.782 55.000 0.00 0.00 35.41 3.67
430 438 0.537653 TTTGTGAGACCCGTGTGTCA 59.462 50.000 0.00 0.00 42.00 3.58
431 439 0.104120 TTGTGAGACCCGTGTGTCAG 59.896 55.000 0.00 0.00 44.53 3.51
432 440 1.040893 TGTGAGACCCGTGTGTCAGT 61.041 55.000 0.00 0.00 44.53 3.41
433 441 0.597637 GTGAGACCCGTGTGTCAGTG 60.598 60.000 0.00 0.00 44.53 3.66
434 442 0.753848 TGAGACCCGTGTGTCAGTGA 60.754 55.000 0.00 0.00 39.62 3.41
435 443 0.318784 GAGACCCGTGTGTCAGTGAC 60.319 60.000 16.68 16.68 37.73 3.67
436 444 0.755698 AGACCCGTGTGTCAGTGACT 60.756 55.000 23.29 1.59 37.73 3.41
437 445 0.318784 GACCCGTGTGTCAGTGACTC 60.319 60.000 23.29 19.84 35.29 3.36
438 446 1.040893 ACCCGTGTGTCAGTGACTCA 61.041 55.000 23.29 22.13 34.38 3.41
439 447 0.104120 CCCGTGTGTCAGTGACTCAA 59.896 55.000 25.22 8.92 37.70 3.02
440 448 1.472552 CCCGTGTGTCAGTGACTCAAA 60.473 52.381 25.22 3.36 37.70 2.69
441 449 1.860950 CCGTGTGTCAGTGACTCAAAG 59.139 52.381 25.22 21.07 37.70 2.77
442 450 1.860950 CGTGTGTCAGTGACTCAAAGG 59.139 52.381 25.22 15.50 37.70 3.11
443 451 2.738643 CGTGTGTCAGTGACTCAAAGGT 60.739 50.000 25.22 0.00 37.70 3.50
444 452 3.490249 CGTGTGTCAGTGACTCAAAGGTA 60.490 47.826 25.22 3.57 37.70 3.08
445 453 4.051922 GTGTGTCAGTGACTCAAAGGTAG 58.948 47.826 25.22 0.00 37.70 3.18
446 454 3.069586 TGTGTCAGTGACTCAAAGGTAGG 59.930 47.826 22.30 0.00 33.95 3.18
447 455 2.037251 TGTCAGTGACTCAAAGGTAGGC 59.963 50.000 23.29 0.00 33.15 3.93
448 456 2.300437 GTCAGTGACTCAAAGGTAGGCT 59.700 50.000 16.26 0.00 0.00 4.58
449 457 2.972713 TCAGTGACTCAAAGGTAGGCTT 59.027 45.455 0.00 0.00 0.00 4.35
450 458 3.070018 CAGTGACTCAAAGGTAGGCTTG 58.930 50.000 0.00 0.00 0.00 4.01
451 459 2.039084 AGTGACTCAAAGGTAGGCTTGG 59.961 50.000 0.00 0.00 0.00 3.61
452 460 1.271379 TGACTCAAAGGTAGGCTTGGC 60.271 52.381 0.00 0.00 0.00 4.52
464 472 4.064768 CTTGGCCATGGCAGGGGA 62.065 66.667 36.56 16.32 44.11 4.81
465 473 3.357952 TTGGCCATGGCAGGGGAT 61.358 61.111 36.56 0.00 44.11 3.85
466 474 3.378472 TTGGCCATGGCAGGGGATC 62.378 63.158 36.56 18.56 44.11 3.36
467 475 4.610526 GGCCATGGCAGGGGATCC 62.611 72.222 36.56 14.15 44.11 3.36
468 476 3.505773 GCCATGGCAGGGGATCCT 61.506 66.667 32.08 0.00 46.26 3.24
469 477 2.842058 CCATGGCAGGGGATCCTC 59.158 66.667 11.07 7.90 42.67 3.71
470 478 2.429058 CATGGCAGGGGATCCTCG 59.571 66.667 12.58 5.37 42.67 4.63
471 479 2.040464 ATGGCAGGGGATCCTCGT 60.040 61.111 12.58 0.44 42.67 4.18
510 518 0.683973 CAGTGAGAGCCAGTGACCTT 59.316 55.000 0.00 0.00 46.68 3.50
545 553 2.294170 TACCGGCACTAGGCTAGGCT 62.294 60.000 23.67 23.67 44.01 4.58
613 621 4.803426 GCGAGTGGCGACCTCTGG 62.803 72.222 5.40 5.67 44.57 3.86
614 622 4.135153 CGAGTGGCGACCTCTGGG 62.135 72.222 5.40 0.00 44.57 4.45
615 623 4.459089 GAGTGGCGACCTCTGGGC 62.459 72.222 5.40 0.00 35.63 5.36
621 629 4.767255 CGACCTCTGGGCCAGTGC 62.767 72.222 31.60 16.60 35.63 4.40
622 630 3.325753 GACCTCTGGGCCAGTGCT 61.326 66.667 31.60 17.85 37.74 4.40
623 631 3.322318 GACCTCTGGGCCAGTGCTC 62.322 68.421 31.60 21.89 38.98 4.26
625 633 2.046507 CTCTGGGCCAGTGCTCAC 60.047 66.667 31.60 0.00 45.08 3.51
626 634 2.848679 TCTGGGCCAGTGCTCACA 60.849 61.111 31.60 9.17 45.08 3.58
627 635 2.359602 CTGGGCCAGTGCTCACAG 60.360 66.667 25.74 0.00 45.08 3.66
628 636 3.914579 CTGGGCCAGTGCTCACAGG 62.915 68.421 25.74 7.04 45.08 4.00
632 640 2.740055 CCAGTGCTCACAGGCGTC 60.740 66.667 2.63 0.00 31.18 5.19
633 641 2.341543 CAGTGCTCACAGGCGTCT 59.658 61.111 2.63 0.00 34.52 4.18
634 642 1.735920 CAGTGCTCACAGGCGTCTC 60.736 63.158 2.63 0.00 34.52 3.36
635 643 1.905843 AGTGCTCACAGGCGTCTCT 60.906 57.895 2.63 0.00 34.52 3.10
636 644 1.445238 GTGCTCACAGGCGTCTCTC 60.445 63.158 0.00 0.00 34.52 3.20
637 645 1.604879 TGCTCACAGGCGTCTCTCT 60.605 57.895 0.00 0.00 34.52 3.10
638 646 1.181741 TGCTCACAGGCGTCTCTCTT 61.182 55.000 0.00 0.00 34.52 2.85
639 647 0.457681 GCTCACAGGCGTCTCTCTTC 60.458 60.000 0.00 0.00 0.00 2.87
640 648 0.179176 CTCACAGGCGTCTCTCTTCG 60.179 60.000 0.00 0.00 0.00 3.79
641 649 1.153939 CACAGGCGTCTCTCTTCGG 60.154 63.158 0.00 0.00 0.00 4.30
642 650 2.344203 ACAGGCGTCTCTCTTCGGG 61.344 63.158 0.00 0.00 0.00 5.14
643 651 2.756283 AGGCGTCTCTCTTCGGGG 60.756 66.667 0.00 0.00 0.00 5.73
644 652 3.069318 GGCGTCTCTCTTCGGGGT 61.069 66.667 0.00 0.00 0.00 4.95
645 653 2.490685 GCGTCTCTCTTCGGGGTC 59.509 66.667 0.00 0.00 0.00 4.46
646 654 2.792599 CGTCTCTCTTCGGGGTCG 59.207 66.667 0.00 0.00 37.82 4.79
647 655 2.762234 CGTCTCTCTTCGGGGTCGG 61.762 68.421 0.00 0.00 36.95 4.79
648 656 2.044252 TCTCTCTTCGGGGTCGGG 60.044 66.667 0.00 0.00 36.95 5.14
649 657 2.362632 CTCTCTTCGGGGTCGGGT 60.363 66.667 0.00 0.00 36.95 5.28
650 658 2.362120 TCTCTTCGGGGTCGGGTC 60.362 66.667 0.00 0.00 36.95 4.46
651 659 3.823330 CTCTTCGGGGTCGGGTCG 61.823 72.222 0.00 0.00 36.95 4.79
660 668 3.756727 GTCGGGTCGGGTCAGGTC 61.757 72.222 0.00 0.00 0.00 3.85
661 669 4.289101 TCGGGTCGGGTCAGGTCA 62.289 66.667 0.00 0.00 0.00 4.02
662 670 3.760035 CGGGTCGGGTCAGGTCAG 61.760 72.222 0.00 0.00 0.00 3.51
663 671 3.391382 GGGTCGGGTCAGGTCAGG 61.391 72.222 0.00 0.00 0.00 3.86
664 672 2.603776 GGTCGGGTCAGGTCAGGT 60.604 66.667 0.00 0.00 0.00 4.00
665 673 2.657237 GTCGGGTCAGGTCAGGTG 59.343 66.667 0.00 0.00 0.00 4.00
666 674 3.311110 TCGGGTCAGGTCAGGTGC 61.311 66.667 0.00 0.00 0.00 5.01
667 675 4.394712 CGGGTCAGGTCAGGTGCC 62.395 72.222 0.00 0.00 0.00 5.01
668 676 4.035102 GGGTCAGGTCAGGTGCCC 62.035 72.222 0.00 0.00 0.00 5.36
669 677 3.249189 GGTCAGGTCAGGTGCCCA 61.249 66.667 0.00 0.00 0.00 5.36
670 678 2.032681 GTCAGGTCAGGTGCCCAC 59.967 66.667 0.00 0.00 0.00 4.61
671 679 2.447572 TCAGGTCAGGTGCCCACA 60.448 61.111 0.40 0.00 0.00 4.17
672 680 1.847506 TCAGGTCAGGTGCCCACAT 60.848 57.895 0.40 0.00 0.00 3.21
673 681 1.377725 CAGGTCAGGTGCCCACATC 60.378 63.158 0.40 0.00 0.00 3.06
674 682 1.847506 AGGTCAGGTGCCCACATCA 60.848 57.895 0.40 0.00 0.00 3.07
675 683 1.210204 AGGTCAGGTGCCCACATCAT 61.210 55.000 0.40 0.00 0.00 2.45
676 684 1.033746 GGTCAGGTGCCCACATCATG 61.034 60.000 0.40 0.00 0.00 3.07
677 685 1.378911 TCAGGTGCCCACATCATGC 60.379 57.895 0.40 0.00 0.00 4.06
678 686 2.438975 AGGTGCCCACATCATGCG 60.439 61.111 0.40 0.00 0.00 4.73
679 687 3.520862 GGTGCCCACATCATGCGG 61.521 66.667 0.40 0.00 0.00 5.69
680 688 2.751436 GTGCCCACATCATGCGGT 60.751 61.111 0.00 0.00 0.00 5.68
681 689 1.451207 GTGCCCACATCATGCGGTA 60.451 57.895 0.00 0.00 0.00 4.02
682 690 1.451207 TGCCCACATCATGCGGTAC 60.451 57.895 0.00 0.00 0.00 3.34
683 691 1.153168 GCCCACATCATGCGGTACT 60.153 57.895 0.00 0.00 0.00 2.73
684 692 0.748005 GCCCACATCATGCGGTACTT 60.748 55.000 0.00 0.00 0.00 2.24
685 693 1.016627 CCCACATCATGCGGTACTTG 58.983 55.000 0.00 0.00 0.00 3.16
686 694 1.406751 CCCACATCATGCGGTACTTGA 60.407 52.381 0.00 0.00 36.91 3.02
687 695 2.355197 CCACATCATGCGGTACTTGAA 58.645 47.619 0.00 0.00 36.17 2.69
688 696 2.746904 CCACATCATGCGGTACTTGAAA 59.253 45.455 0.00 0.00 36.17 2.69
689 697 3.426159 CCACATCATGCGGTACTTGAAAC 60.426 47.826 0.00 0.00 36.17 2.78
690 698 3.436704 CACATCATGCGGTACTTGAAACT 59.563 43.478 0.00 0.00 36.17 2.66
691 699 3.684788 ACATCATGCGGTACTTGAAACTC 59.315 43.478 0.00 0.00 36.17 3.01
692 700 3.394674 TCATGCGGTACTTGAAACTCA 57.605 42.857 0.00 0.00 30.00 3.41
693 701 3.734463 TCATGCGGTACTTGAAACTCAA 58.266 40.909 0.00 0.00 34.79 3.02
701 709 2.285319 CTTGAAACTCAAGTGCGACG 57.715 50.000 8.02 0.00 46.50 5.12
702 710 0.934496 TTGAAACTCAAGTGCGACGG 59.066 50.000 0.00 0.00 31.83 4.79
703 711 0.103390 TGAAACTCAAGTGCGACGGA 59.897 50.000 0.00 0.00 0.00 4.69
704 712 0.507358 GAAACTCAAGTGCGACGGAC 59.493 55.000 11.99 11.99 0.00 4.79
705 713 1.213094 AAACTCAAGTGCGACGGACG 61.213 55.000 14.02 2.25 45.66 4.79
706 714 2.805353 CTCAAGTGCGACGGACGG 60.805 66.667 14.02 10.50 42.83 4.79
707 715 3.263503 CTCAAGTGCGACGGACGGA 62.264 63.158 14.02 14.03 42.83 4.69
714 722 4.029186 CGACGGACGGACGGACAA 62.029 66.667 6.00 0.00 38.39 3.18
715 723 2.429739 GACGGACGGACGGACAAC 60.430 66.667 6.00 0.00 38.39 3.32
716 724 3.198236 GACGGACGGACGGACAACA 62.198 63.158 6.00 0.00 38.39 3.33
717 725 2.430244 CGGACGGACGGACAACAG 60.430 66.667 0.00 0.00 0.00 3.16
799 807 0.600255 CAAAAGAGACGGTCCAGCGT 60.600 55.000 2.96 2.96 0.00 5.07
995 1011 2.283532 CCATTTGCCCCGAACCCA 60.284 61.111 0.00 0.00 0.00 4.51
1099 1115 1.068954 CCGCAAAGGTGAAGAAGAAGC 60.069 52.381 0.00 0.00 34.51 3.86
1155 1171 2.031919 ATCGCCAAGTTGGACGCA 59.968 55.556 26.52 16.42 40.96 5.24
1229 1245 2.437180 CAAGAGAGCCGCCATGCA 60.437 61.111 0.00 0.00 0.00 3.96
1464 1541 3.041940 CCAAGGCACGACGGACAC 61.042 66.667 0.00 0.00 0.00 3.67
1794 1872 4.185059 GCCGAGTACGTCCCCGAC 62.185 72.222 0.00 0.00 37.88 4.79
1945 2035 0.319555 CGACGAGCTCACCCAAAGAA 60.320 55.000 15.40 0.00 0.00 2.52
2357 2450 5.820131 TGTTCACTTGTTGTTGATCATGTC 58.180 37.500 0.00 0.00 0.00 3.06
2436 2529 1.393539 CTCTTACGCATTGTTGGACGG 59.606 52.381 0.00 0.00 0.00 4.79
2453 2546 0.173255 CGGTCATCAACAATTGCCCC 59.827 55.000 5.05 0.00 0.00 5.80
2797 2890 0.898320 CAACTCGACATGGAGGAGGT 59.102 55.000 12.59 5.11 38.39 3.85
2843 2936 2.193536 GGCCAACAACGTCAAGGCT 61.194 57.895 17.15 0.00 44.60 4.58
3205 3307 2.281070 CTGGCTGTGTTGTCGGCT 60.281 61.111 0.00 0.00 39.41 5.52
3331 3451 4.552365 CGCGGACATGATGGGGCT 62.552 66.667 0.00 0.00 0.00 5.19
3416 3538 0.250424 AAACCCTACCCAAACGGACG 60.250 55.000 0.00 0.00 34.64 4.79
3417 3539 1.410050 AACCCTACCCAAACGGACGT 61.410 55.000 0.00 0.00 34.64 4.34
3418 3540 1.079612 CCCTACCCAAACGGACGTC 60.080 63.158 7.13 7.13 34.64 4.34
3430 3552 3.838468 GACGTCCGTTTGAGGTCG 58.162 61.111 3.51 1.55 45.71 4.79
3431 3553 2.355481 ACGTCCGTTTGAGGTCGC 60.355 61.111 2.89 0.00 44.45 5.19
3433 3555 3.774702 GTCCGTTTGAGGTCGCGC 61.775 66.667 0.00 0.00 0.00 6.86
3434 3556 4.287781 TCCGTTTGAGGTCGCGCA 62.288 61.111 8.75 0.00 0.00 6.09
3436 3558 3.036084 CGTTTGAGGTCGCGCAGT 61.036 61.111 8.75 0.00 0.00 4.40
3437 3559 2.551270 GTTTGAGGTCGCGCAGTG 59.449 61.111 8.75 0.00 40.84 3.66
3438 3560 2.664851 TTTGAGGTCGCGCAGTGG 60.665 61.111 8.75 0.00 39.32 4.00
3440 3562 3.573772 TTGAGGTCGCGCAGTGGAG 62.574 63.158 8.75 0.00 39.32 3.86
3441 3563 4.057428 GAGGTCGCGCAGTGGAGT 62.057 66.667 8.75 0.00 39.32 3.85
3442 3564 3.575351 GAGGTCGCGCAGTGGAGTT 62.575 63.158 8.75 0.00 39.32 3.01
3444 3566 3.414700 GTCGCGCAGTGGAGTTGG 61.415 66.667 8.75 0.00 39.32 3.77
3454 3576 1.004745 AGTGGAGTTGGCCTAATGTGG 59.995 52.381 3.32 0.00 0.00 4.17
3455 3577 0.331278 TGGAGTTGGCCTAATGTGGG 59.669 55.000 3.32 0.00 0.00 4.61
3467 3589 1.315257 AATGTGGGCATTCTCGTGGC 61.315 55.000 0.00 0.00 41.08 5.01
3490 4087 4.111916 CAGCTCAACAAACGGTCATTTTT 58.888 39.130 0.00 0.00 0.00 1.94
3512 4109 2.045561 TGACCATGTCAACAAACGGT 57.954 45.000 0.00 2.87 39.78 4.83
3514 4111 1.944024 GACCATGTCAACAAACGGTCA 59.056 47.619 17.88 0.00 40.50 4.02
3515 4112 2.552315 GACCATGTCAACAAACGGTCAT 59.448 45.455 17.88 0.00 40.50 3.06
3517 4114 3.243367 ACCATGTCAACAAACGGTCATTG 60.243 43.478 0.00 0.00 0.00 2.82
3518 4115 3.243367 CCATGTCAACAAACGGTCATTGT 60.243 43.478 0.00 0.00 42.56 2.71
3519 4116 3.412981 TGTCAACAAACGGTCATTGTG 57.587 42.857 0.00 0.00 39.98 3.33
3520 4117 2.750166 TGTCAACAAACGGTCATTGTGT 59.250 40.909 0.00 0.00 39.98 3.72
3522 4119 2.098280 TCAACAAACGGTCATTGTGTGG 59.902 45.455 0.00 0.00 39.98 4.17
3523 4120 2.045561 ACAAACGGTCATTGTGTGGA 57.954 45.000 0.00 0.00 39.43 4.02
3525 4122 2.552315 ACAAACGGTCATTGTGTGGATC 59.448 45.455 0.00 0.00 39.43 3.36
3527 4124 0.320374 ACGGTCATTGTGTGGATCGT 59.680 50.000 0.00 0.00 0.00 3.73
3528 4125 0.999406 CGGTCATTGTGTGGATCGTC 59.001 55.000 0.00 0.00 0.00 4.20
3529 4126 1.404181 CGGTCATTGTGTGGATCGTCT 60.404 52.381 0.00 0.00 0.00 4.18
3530 4127 2.159296 CGGTCATTGTGTGGATCGTCTA 60.159 50.000 0.00 0.00 0.00 2.59
3531 4128 3.187700 GGTCATTGTGTGGATCGTCTAC 58.812 50.000 0.00 0.00 0.00 2.59
3532 4129 3.119101 GGTCATTGTGTGGATCGTCTACT 60.119 47.826 3.92 0.00 0.00 2.57
3533 4130 4.097437 GGTCATTGTGTGGATCGTCTACTA 59.903 45.833 3.92 0.00 0.00 1.82
3534 4131 5.035443 GTCATTGTGTGGATCGTCTACTAC 58.965 45.833 3.92 0.00 0.00 2.73
3583 6162 4.927782 AACGGGCTGCTGTTGCGA 62.928 61.111 9.39 0.00 43.34 5.10
3591 6170 0.870393 CTGCTGTTGCGAGAACATGT 59.130 50.000 0.00 0.00 43.34 3.21
3624 6203 1.269778 GCTGGTTTGGGCAAAGAGAAC 60.270 52.381 0.00 0.00 0.00 3.01
3630 6209 1.979155 GGGCAAAGAGAACCAGGCC 60.979 63.158 0.00 0.00 40.63 5.19
3652 6231 2.406616 CGCCGCCATGCCTTTTACT 61.407 57.895 0.00 0.00 0.00 2.24
3653 6232 1.092921 CGCCGCCATGCCTTTTACTA 61.093 55.000 0.00 0.00 0.00 1.82
3654 6233 0.380733 GCCGCCATGCCTTTTACTAC 59.619 55.000 0.00 0.00 0.00 2.73
3655 6234 2.017113 GCCGCCATGCCTTTTACTACT 61.017 52.381 0.00 0.00 0.00 2.57
3656 6235 2.743838 GCCGCCATGCCTTTTACTACTA 60.744 50.000 0.00 0.00 0.00 1.82
3657 6236 2.870411 CCGCCATGCCTTTTACTACTAC 59.130 50.000 0.00 0.00 0.00 2.73
3658 6237 3.527533 CGCCATGCCTTTTACTACTACA 58.472 45.455 0.00 0.00 0.00 2.74
3659 6238 3.555956 CGCCATGCCTTTTACTACTACAG 59.444 47.826 0.00 0.00 0.00 2.74
3682 6261 5.975939 AGTACTACTATTTCAATCCGCGAAC 59.024 40.000 8.23 0.00 0.00 3.95
3693 6272 3.708563 ATCCGCGAACAATATTTTGGG 57.291 42.857 8.23 0.00 37.15 4.12
3708 6287 3.304911 TTTGGGCGGAATAATCCATGA 57.695 42.857 0.00 0.00 46.97 3.07
3725 6304 3.056607 CCATGACCAATCAAACAAGTCCC 60.057 47.826 0.00 0.00 38.69 4.46
3800 6380 4.027572 CGAAGCAGGTTGACTTTTCAAA 57.972 40.909 0.00 0.00 43.52 2.69
3807 6387 2.459934 GTTGACTTTTCAAACTGCCCG 58.540 47.619 0.00 0.00 43.52 6.13
3836 6420 4.423209 ACCCTCCCTCCCCTCTGC 62.423 72.222 0.00 0.00 0.00 4.26
3859 6443 1.893062 GGCACAAATCCCAGCTTCC 59.107 57.895 0.00 0.00 0.00 3.46
3921 6505 4.036027 CCTAGATTTTGGCGTCTCGTAGTA 59.964 45.833 0.00 0.00 0.00 1.82
3922 6506 3.767278 AGATTTTGGCGTCTCGTAGTAC 58.233 45.455 0.00 0.00 0.00 2.73
3951 6540 1.949257 CGTGGAACAGGCTCAAACC 59.051 57.895 0.00 0.00 41.80 3.27
3952 6541 1.515521 CGTGGAACAGGCTCAAACCC 61.516 60.000 0.00 0.00 41.80 4.11
3953 6542 0.467290 GTGGAACAGGCTCAAACCCA 60.467 55.000 0.00 0.00 41.80 4.51
3954 6543 0.178992 TGGAACAGGCTCAAACCCAG 60.179 55.000 0.00 0.00 0.00 4.45
3955 6544 1.527433 GGAACAGGCTCAAACCCAGC 61.527 60.000 0.00 0.00 36.02 4.85
3996 6585 1.957177 TCTCCAGGCAGCTACTATTCG 59.043 52.381 0.00 0.00 0.00 3.34
4029 6627 3.278668 AGCTCATGCATGCTCTTACTT 57.721 42.857 22.25 0.00 42.74 2.24
4050 6680 7.054491 ACTTAGCTCACCATTTTTCAAACAT 57.946 32.000 0.00 0.00 0.00 2.71
4091 6722 5.813080 AGTACAAAGCAAACGAAAAGTCT 57.187 34.783 0.00 0.00 0.00 3.24
4102 6733 2.034558 ACGAAAAGTCTAACCCGTCGAA 59.965 45.455 0.00 0.00 0.00 3.71
4183 8688 4.027065 GCACAAGACGTATCGTGTAGTAG 58.973 47.826 2.89 0.00 44.53 2.57
4184 8689 4.436584 GCACAAGACGTATCGTGTAGTAGT 60.437 45.833 2.89 0.00 44.53 2.73
4186 8691 6.181255 CACAAGACGTATCGTGTAGTAGTAC 58.819 44.000 0.37 0.37 44.53 2.73
4187 8692 5.292101 ACAAGACGTATCGTGTAGTAGTACC 59.708 44.000 5.26 0.00 44.50 3.34
4188 8693 5.011090 AGACGTATCGTGTAGTAGTACCA 57.989 43.478 5.26 0.00 41.37 3.25
4192 8697 5.586243 ACGTATCGTGTAGTAGTACCATGTT 59.414 40.000 5.26 0.00 39.18 2.71
4195 8700 2.850060 CGTGTAGTAGTACCATGTTGCG 59.150 50.000 5.26 0.00 0.00 4.85
4196 8701 3.184541 GTGTAGTAGTACCATGTTGCGG 58.815 50.000 5.26 0.00 0.00 5.69
4199 8704 0.725117 GTAGTACCATGTTGCGGCAC 59.275 55.000 0.05 0.00 0.00 5.01
4263 8773 8.198109 TGCTGCTTTTAAACAACATTTTACCTA 58.802 29.630 0.00 0.00 0.00 3.08
4293 8803 1.448540 GACACGGTGATGGCTCCTG 60.449 63.158 16.29 0.00 0.00 3.86
4317 8844 5.337578 AGCAAGTTAACAAAAGCTCCAAA 57.662 34.783 8.61 0.00 0.00 3.28
4321 8848 6.680378 GCAAGTTAACAAAAGCTCCAAAGAGA 60.680 38.462 8.61 0.00 43.39 3.10
4322 8849 7.428826 CAAGTTAACAAAAGCTCCAAAGAGAT 58.571 34.615 8.61 0.00 43.39 2.75
4324 8851 4.861102 AACAAAAGCTCCAAAGAGATGG 57.139 40.909 0.00 0.00 43.39 3.51
4339 8870 5.633830 AGAGATGGCATGTAAACACAAAG 57.366 39.130 3.81 0.00 0.00 2.77
4350 8881 7.959651 GCATGTAAACACAAAGAGATTCACTAG 59.040 37.037 0.00 0.00 0.00 2.57
4412 8948 1.837439 ACATCCTAATCGGCCAGTGAA 59.163 47.619 2.24 0.00 0.00 3.18
4415 8951 2.398588 TCCTAATCGGCCAGTGAAGAT 58.601 47.619 2.24 0.00 0.00 2.40
4420 8956 1.522355 CGGCCAGTGAAGATGCGAT 60.522 57.895 2.24 0.00 0.00 4.58
4449 8985 5.106948 CCACATCGAATGCAATACTGTATCC 60.107 44.000 0.00 0.00 0.00 2.59
4468 9004 1.556451 CCTGATCATCCCACACTCACA 59.444 52.381 0.00 0.00 0.00 3.58
4469 9005 2.172082 CCTGATCATCCCACACTCACAT 59.828 50.000 0.00 0.00 0.00 3.21
4471 9007 4.502777 CCTGATCATCCCACACTCACATAG 60.503 50.000 0.00 0.00 0.00 2.23
4472 9008 2.988010 TCATCCCACACTCACATAGC 57.012 50.000 0.00 0.00 0.00 2.97
4473 9009 1.486310 TCATCCCACACTCACATAGCC 59.514 52.381 0.00 0.00 0.00 3.93
4475 9011 0.546507 TCCCACACTCACATAGCCCA 60.547 55.000 0.00 0.00 0.00 5.36
4476 9012 0.392998 CCCACACTCACATAGCCCAC 60.393 60.000 0.00 0.00 0.00 4.61
4484 9020 1.003118 TCACATAGCCCACAAGTCACC 59.997 52.381 0.00 0.00 0.00 4.02
4485 9021 0.036388 ACATAGCCCACAAGTCACCG 60.036 55.000 0.00 0.00 0.00 4.94
4504 9042 1.591183 GCAAACCGCAACCCATCAT 59.409 52.632 0.00 0.00 41.79 2.45
4567 9107 7.254227 ACTTTCGTGTAACTCAAGCAAAATA 57.746 32.000 0.00 0.00 29.34 1.40
4581 9121 8.500837 TCAAGCAAAATACACTGTTTAATTCG 57.499 30.769 0.00 0.00 0.00 3.34
4604 9145 5.391310 CGGTAGAAAGCTCTAACAAGACGTA 60.391 44.000 0.00 0.00 41.34 3.57
4724 9277 0.600057 CAAGCAGAAAGAGGTTGGGC 59.400 55.000 0.00 0.00 39.94 5.36
4736 9289 3.136443 AGAGGTTGGGCGATCATTGATTA 59.864 43.478 0.00 0.00 0.00 1.75
4869 9618 3.317603 TCAATTGATGCGTCTCTCACA 57.682 42.857 3.38 0.00 0.00 3.58
4926 9678 1.347050 CCATCCATCGGCTCAGATTCT 59.653 52.381 0.00 0.00 0.00 2.40
4928 9680 1.780503 TCCATCGGCTCAGATTCTGA 58.219 50.000 15.39 15.39 38.25 3.27
4984 9736 4.023193 CCTTCTTTTTAATCGGCACACACT 60.023 41.667 0.00 0.00 0.00 3.55
4986 9738 4.130857 TCTTTTTAATCGGCACACACTCA 58.869 39.130 0.00 0.00 0.00 3.41
4987 9739 3.889196 TTTTAATCGGCACACACTCAC 57.111 42.857 0.00 0.00 0.00 3.51
4988 9740 2.535012 TTAATCGGCACACACTCACA 57.465 45.000 0.00 0.00 0.00 3.58
4989 9741 1.790755 TAATCGGCACACACTCACAC 58.209 50.000 0.00 0.00 0.00 3.82
4990 9742 0.179059 AATCGGCACACACTCACACA 60.179 50.000 0.00 0.00 0.00 3.72
4991 9743 0.880278 ATCGGCACACACTCACACAC 60.880 55.000 0.00 0.00 0.00 3.82
4992 9744 2.534019 CGGCACACACTCACACACC 61.534 63.158 0.00 0.00 0.00 4.16
4999 9751 3.556306 ACTCACACACCCCCACCG 61.556 66.667 0.00 0.00 0.00 4.94
5035 9787 2.214376 AACTCGGGCATTCAATTCCA 57.786 45.000 0.00 0.00 0.00 3.53
5162 9914 0.755698 GGATCAGGACCAGACGGCTA 60.756 60.000 0.00 0.00 34.57 3.93
5163 9915 0.671251 GATCAGGACCAGACGGCTAG 59.329 60.000 0.00 0.00 34.57 3.42
5164 9916 1.395826 ATCAGGACCAGACGGCTAGC 61.396 60.000 6.04 6.04 34.57 3.42
5166 9918 2.055042 AGGACCAGACGGCTAGCTG 61.055 63.158 22.26 22.26 34.57 4.24
5167 9919 2.352032 GGACCAGACGGCTAGCTGT 61.352 63.158 29.14 29.14 38.41 4.40
5168 9920 1.153745 GACCAGACGGCTAGCTGTG 60.154 63.158 33.39 20.80 35.39 3.66
5172 9932 1.374758 AGACGGCTAGCTGTGCAAC 60.375 57.895 33.39 18.44 35.39 4.17
5174 9934 2.738521 CGGCTAGCTGTGCAACGT 60.739 61.111 15.85 0.00 42.39 3.99
5192 9952 0.175760 GTAGTGATCGGGCAGCTGAA 59.824 55.000 20.43 0.00 0.00 3.02
5198 9958 2.564553 ATCGGGCAGCTGAACTCGTC 62.565 60.000 20.43 0.00 0.00 4.20
5199 9959 2.343758 GGGCAGCTGAACTCGTCA 59.656 61.111 20.43 0.00 34.17 4.35
5213 9981 0.589223 TCGTCACAAATTGTTCGGCC 59.411 50.000 16.16 0.00 0.00 6.13
5214 9982 0.724453 CGTCACAAATTGTTCGGCCG 60.724 55.000 22.12 22.12 0.00 6.13
5223 9991 4.404654 GTTCGGCCGGCAAGCAAG 62.405 66.667 30.85 11.66 0.00 4.01
5230 9998 2.430244 CGGCAAGCAAGCAAGCAG 60.430 61.111 10.15 3.46 36.85 4.24
5234 10002 1.372997 CAAGCAAGCAAGCAGGCAG 60.373 57.895 9.92 0.00 36.85 4.85
5241 10009 3.060615 CAAGCAGGCAGGCAGGAC 61.061 66.667 0.00 0.00 35.83 3.85
5243 10011 3.564345 AAGCAGGCAGGCAGGACAG 62.564 63.158 0.00 0.00 35.83 3.51
5246 10014 3.007920 AGGCAGGCAGGACAGGAG 61.008 66.667 0.00 0.00 0.00 3.69
5248 10016 1.990060 GGCAGGCAGGACAGGAGTA 60.990 63.158 0.00 0.00 0.00 2.59
5249 10017 1.553690 GGCAGGCAGGACAGGAGTAA 61.554 60.000 0.00 0.00 0.00 2.24
5250 10018 0.543749 GCAGGCAGGACAGGAGTAAT 59.456 55.000 0.00 0.00 0.00 1.89
5251 10019 1.762957 GCAGGCAGGACAGGAGTAATA 59.237 52.381 0.00 0.00 0.00 0.98
5252 10020 2.170607 GCAGGCAGGACAGGAGTAATAA 59.829 50.000 0.00 0.00 0.00 1.40
5253 10021 3.798202 CAGGCAGGACAGGAGTAATAAC 58.202 50.000 0.00 0.00 0.00 1.89
5254 10022 2.772515 AGGCAGGACAGGAGTAATAACC 59.227 50.000 0.00 0.00 0.00 2.85
5262 10030 6.154706 AGGACAGGAGTAATAACCTAGTTGTG 59.845 42.308 0.00 0.00 34.87 3.33
5309 10077 4.201920 CGAGTATGAAATCTCACGGACTCA 60.202 45.833 7.82 0.00 38.18 3.41
5369 10140 4.702196 ACTAAGGGTGGTAGTAATTGGGA 58.298 43.478 0.00 0.00 29.89 4.37
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.153549 CGCCTGCTCTGGGTCTTAC 60.154 63.158 0.00 0.00 0.00 2.34
1 2 3.019003 GCGCCTGCTCTGGGTCTTA 62.019 63.158 0.00 0.00 38.39 2.10
2 3 4.400961 GCGCCTGCTCTGGGTCTT 62.401 66.667 0.00 0.00 38.39 3.01
17 18 3.574445 GATCTGCTGGCTGCTGCG 61.574 66.667 17.45 6.28 43.37 5.18
81 82 1.443363 GAACGGAAGGTCGACGGAC 60.443 63.158 9.92 2.79 38.52 4.79
89 90 1.003928 GGTGGTAATGGAACGGAAGGT 59.996 52.381 0.00 0.00 0.00 3.50
91 92 1.680860 GGGGTGGTAATGGAACGGAAG 60.681 57.143 0.00 0.00 0.00 3.46
92 93 0.328926 GGGGTGGTAATGGAACGGAA 59.671 55.000 0.00 0.00 0.00 4.30
93 94 1.564483 GGGGGTGGTAATGGAACGGA 61.564 60.000 0.00 0.00 0.00 4.69
95 96 4.649845 GGGGGTGGTAATGGAACG 57.350 61.111 0.00 0.00 0.00 3.95
110 111 1.451936 CAGCCTTTCTATCCCGGGG 59.548 63.158 23.50 6.77 0.00 5.73
115 116 0.839946 TCCAGCCAGCCTTTCTATCC 59.160 55.000 0.00 0.00 0.00 2.59
209 217 3.636043 CCGTGCTGTCGTTGCGTT 61.636 61.111 0.00 0.00 0.00 4.84
330 338 3.927163 ATCCACGTCCAACCGCGAC 62.927 63.158 8.23 0.00 0.00 5.19
331 339 3.636313 GATCCACGTCCAACCGCGA 62.636 63.158 8.23 0.00 0.00 5.87
332 340 3.186047 GATCCACGTCCAACCGCG 61.186 66.667 0.00 0.00 0.00 6.46
333 341 2.818274 GGATCCACGTCCAACCGC 60.818 66.667 6.95 0.00 38.20 5.68
334 342 1.153628 GAGGATCCACGTCCAACCG 60.154 63.158 15.82 0.00 40.90 4.44
335 343 1.481871 TAGAGGATCCACGTCCAACC 58.518 55.000 15.82 0.00 40.90 3.77
336 344 2.496470 AGTTAGAGGATCCACGTCCAAC 59.504 50.000 15.82 8.47 40.90 3.77
337 345 2.816411 AGTTAGAGGATCCACGTCCAA 58.184 47.619 15.82 0.00 40.90 3.53
338 346 2.526888 AGTTAGAGGATCCACGTCCA 57.473 50.000 15.82 0.00 40.90 4.02
339 347 3.522553 CAAAGTTAGAGGATCCACGTCC 58.477 50.000 15.82 0.79 38.62 4.79
340 348 2.930682 GCAAAGTTAGAGGATCCACGTC 59.069 50.000 15.82 2.55 33.66 4.34
341 349 2.301870 TGCAAAGTTAGAGGATCCACGT 59.698 45.455 15.82 0.00 33.66 4.49
342 350 2.972625 TGCAAAGTTAGAGGATCCACG 58.027 47.619 15.82 0.00 33.66 4.94
343 351 4.336713 GGATTGCAAAGTTAGAGGATCCAC 59.663 45.833 15.82 8.01 33.66 4.02
344 352 4.526970 GGATTGCAAAGTTAGAGGATCCA 58.473 43.478 15.82 0.00 33.66 3.41
345 353 3.885901 GGGATTGCAAAGTTAGAGGATCC 59.114 47.826 1.71 2.48 33.66 3.36
346 354 4.578105 CAGGGATTGCAAAGTTAGAGGATC 59.422 45.833 1.71 0.00 0.00 3.36
347 355 4.530875 CAGGGATTGCAAAGTTAGAGGAT 58.469 43.478 1.71 0.00 0.00 3.24
348 356 3.955471 CAGGGATTGCAAAGTTAGAGGA 58.045 45.455 1.71 0.00 0.00 3.71
361 369 0.825010 GCAGGGTATGGCAGGGATTG 60.825 60.000 0.00 0.00 0.00 2.67
362 370 1.538666 GCAGGGTATGGCAGGGATT 59.461 57.895 0.00 0.00 0.00 3.01
363 371 3.255032 GCAGGGTATGGCAGGGAT 58.745 61.111 0.00 0.00 0.00 3.85
370 378 1.281867 TGACTCAAAGGCAGGGTATGG 59.718 52.381 0.00 0.00 0.00 2.74
371 379 2.026822 AGTGACTCAAAGGCAGGGTATG 60.027 50.000 0.00 0.00 30.96 2.39
372 380 2.026822 CAGTGACTCAAAGGCAGGGTAT 60.027 50.000 0.00 0.00 30.96 2.73
373 381 1.347707 CAGTGACTCAAAGGCAGGGTA 59.652 52.381 0.00 0.00 30.96 3.69
374 382 0.109342 CAGTGACTCAAAGGCAGGGT 59.891 55.000 0.00 0.00 30.96 4.34
375 383 0.397941 TCAGTGACTCAAAGGCAGGG 59.602 55.000 0.00 0.00 30.96 4.45
376 384 1.202687 TGTCAGTGACTCAAAGGCAGG 60.203 52.381 23.29 0.00 30.96 4.85
377 385 2.141517 CTGTCAGTGACTCAAAGGCAG 58.858 52.381 23.29 6.76 30.96 4.85
378 386 1.202687 CCTGTCAGTGACTCAAAGGCA 60.203 52.381 23.29 0.38 33.15 4.75
379 387 1.202698 ACCTGTCAGTGACTCAAAGGC 60.203 52.381 23.29 0.00 33.15 4.35
380 388 2.487934 CACCTGTCAGTGACTCAAAGG 58.512 52.381 23.29 21.72 40.34 3.11
381 389 2.487934 CCACCTGTCAGTGACTCAAAG 58.512 52.381 23.29 12.34 40.34 2.77
382 390 1.140852 CCCACCTGTCAGTGACTCAAA 59.859 52.381 23.29 2.89 40.34 2.69
383 391 0.758734 CCCACCTGTCAGTGACTCAA 59.241 55.000 23.29 3.26 40.34 3.02
384 392 1.758440 GCCCACCTGTCAGTGACTCA 61.758 60.000 23.29 4.07 40.34 3.41
385 393 1.004440 GCCCACCTGTCAGTGACTC 60.004 63.158 23.29 0.00 40.34 3.36
386 394 2.520536 GGCCCACCTGTCAGTGACT 61.521 63.158 23.29 1.01 40.34 3.41
387 395 2.032681 GGCCCACCTGTCAGTGAC 59.967 66.667 16.68 16.68 40.34 3.67
397 405 1.607467 ACAAAGCATGAGGCCCACC 60.607 57.895 0.00 0.00 46.50 4.61
398 406 0.895100 TCACAAAGCATGAGGCCCAC 60.895 55.000 0.00 0.00 46.50 4.61
399 407 0.609957 CTCACAAAGCATGAGGCCCA 60.610 55.000 0.00 0.00 46.50 5.36
400 408 0.322816 TCTCACAAAGCATGAGGCCC 60.323 55.000 0.00 0.00 46.50 5.80
401 409 0.807496 GTCTCACAAAGCATGAGGCC 59.193 55.000 0.00 0.00 41.97 5.19
402 410 0.807496 GGTCTCACAAAGCATGAGGC 59.193 55.000 0.00 0.19 46.12 4.70
403 411 1.457346 GGGTCTCACAAAGCATGAGG 58.543 55.000 0.00 0.00 43.25 3.86
404 412 1.081892 CGGGTCTCACAAAGCATGAG 58.918 55.000 0.00 0.00 44.22 2.90
405 413 0.396435 ACGGGTCTCACAAAGCATGA 59.604 50.000 0.00 0.00 0.00 3.07
406 414 0.518636 CACGGGTCTCACAAAGCATG 59.481 55.000 0.00 0.00 0.00 4.06
407 415 0.108585 ACACGGGTCTCACAAAGCAT 59.891 50.000 0.00 0.00 0.00 3.79
408 416 0.813610 CACACGGGTCTCACAAAGCA 60.814 55.000 0.00 0.00 0.00 3.91
409 417 0.814010 ACACACGGGTCTCACAAAGC 60.814 55.000 0.00 0.00 0.00 3.51
410 418 1.217882 GACACACGGGTCTCACAAAG 58.782 55.000 0.00 0.00 34.92 2.77
411 419 0.537653 TGACACACGGGTCTCACAAA 59.462 50.000 0.44 0.00 38.61 2.83
412 420 0.104120 CTGACACACGGGTCTCACAA 59.896 55.000 0.44 0.00 38.61 3.33
413 421 1.040893 ACTGACACACGGGTCTCACA 61.041 55.000 0.44 0.00 38.61 3.58
414 422 0.597637 CACTGACACACGGGTCTCAC 60.598 60.000 0.44 0.00 38.61 3.51
415 423 0.753848 TCACTGACACACGGGTCTCA 60.754 55.000 0.00 0.00 38.61 3.27
416 424 0.318784 GTCACTGACACACGGGTCTC 60.319 60.000 4.17 0.00 38.61 3.36
417 425 0.755698 AGTCACTGACACACGGGTCT 60.756 55.000 11.80 0.00 38.61 3.85
418 426 0.318784 GAGTCACTGACACACGGGTC 60.319 60.000 11.80 0.00 38.29 4.46
419 427 1.040893 TGAGTCACTGACACACGGGT 61.041 55.000 11.80 0.00 34.60 5.28
420 428 0.104120 TTGAGTCACTGACACACGGG 59.896 55.000 11.80 0.00 33.37 5.28
421 429 1.860950 CTTTGAGTCACTGACACACGG 59.139 52.381 11.80 3.46 33.37 4.94
422 430 1.860950 CCTTTGAGTCACTGACACACG 59.139 52.381 11.80 5.33 33.37 4.49
423 431 2.906354 ACCTTTGAGTCACTGACACAC 58.094 47.619 11.80 3.56 33.37 3.82
424 432 3.069586 CCTACCTTTGAGTCACTGACACA 59.930 47.826 11.80 8.49 34.60 3.72
425 433 3.654414 CCTACCTTTGAGTCACTGACAC 58.346 50.000 11.80 5.84 34.60 3.67
426 434 2.037251 GCCTACCTTTGAGTCACTGACA 59.963 50.000 11.80 0.00 34.60 3.58
427 435 2.300437 AGCCTACCTTTGAGTCACTGAC 59.700 50.000 0.38 0.38 0.00 3.51
428 436 2.609747 AGCCTACCTTTGAGTCACTGA 58.390 47.619 0.00 0.00 0.00 3.41
429 437 3.070018 CAAGCCTACCTTTGAGTCACTG 58.930 50.000 0.00 0.00 0.00 3.66
430 438 2.039084 CCAAGCCTACCTTTGAGTCACT 59.961 50.000 0.00 0.00 0.00 3.41
431 439 2.427506 CCAAGCCTACCTTTGAGTCAC 58.572 52.381 0.00 0.00 0.00 3.67
432 440 1.271379 GCCAAGCCTACCTTTGAGTCA 60.271 52.381 0.00 0.00 0.00 3.41
433 441 1.454201 GCCAAGCCTACCTTTGAGTC 58.546 55.000 0.00 0.00 0.00 3.36
434 442 0.038310 GGCCAAGCCTACCTTTGAGT 59.962 55.000 0.00 0.00 46.69 3.41
435 443 2.873797 GGCCAAGCCTACCTTTGAG 58.126 57.895 0.00 0.00 46.69 3.02
447 455 3.384555 ATCCCCTGCCATGGCCAAG 62.385 63.158 33.44 23.96 41.09 3.61
448 456 3.357952 ATCCCCTGCCATGGCCAA 61.358 61.111 33.44 15.61 41.09 4.52
449 457 3.824425 GATCCCCTGCCATGGCCA 61.824 66.667 33.44 19.88 41.09 5.36
450 458 4.610526 GGATCCCCTGCCATGGCC 62.611 72.222 33.44 15.93 41.09 5.36
451 459 3.504204 GAGGATCCCCTGCCATGGC 62.504 68.421 30.54 30.54 44.53 4.40
452 460 2.842058 GAGGATCCCCTGCCATGG 59.158 66.667 8.55 7.63 44.53 3.66
453 461 2.388890 GACGAGGATCCCCTGCCATG 62.389 65.000 8.55 0.00 44.53 3.66
454 462 2.040464 ACGAGGATCCCCTGCCAT 60.040 61.111 8.55 0.00 44.53 4.40
455 463 2.764128 GACGAGGATCCCCTGCCA 60.764 66.667 8.55 0.00 44.53 4.92
456 464 3.551407 GGACGAGGATCCCCTGCC 61.551 72.222 8.55 1.52 44.53 4.85
457 465 3.917760 CGGACGAGGATCCCCTGC 61.918 72.222 8.55 0.00 44.53 4.85
458 466 2.442272 ACGGACGAGGATCCCCTG 60.442 66.667 8.55 0.45 44.53 4.45
460 468 3.593794 CGACGGACGAGGATCCCC 61.594 72.222 8.55 0.79 45.77 4.81
461 469 4.267503 GCGACGGACGAGGATCCC 62.268 72.222 8.55 0.00 45.77 3.85
462 470 4.609247 CGCGACGGACGAGGATCC 62.609 72.222 2.48 2.48 45.77 3.36
521 529 0.535797 AGCCTAGTGCCGGTAGTTTC 59.464 55.000 4.81 0.00 42.71 2.78
594 602 3.071206 AGAGGTCGCCACTCGCAT 61.071 61.111 0.00 0.00 39.90 4.73
611 619 3.957586 CCTGTGAGCACTGGCCCA 61.958 66.667 12.61 0.00 42.20 5.36
617 625 1.872197 GAGAGACGCCTGTGAGCACT 61.872 60.000 1.99 0.00 0.00 4.40
618 626 1.445238 GAGAGACGCCTGTGAGCAC 60.445 63.158 0.00 0.00 0.00 4.40
619 627 1.181741 AAGAGAGACGCCTGTGAGCA 61.182 55.000 0.00 0.00 0.00 4.26
621 629 0.179176 CGAAGAGAGACGCCTGTGAG 60.179 60.000 0.00 0.00 0.00 3.51
622 630 1.587043 CCGAAGAGAGACGCCTGTGA 61.587 60.000 0.00 0.00 0.00 3.58
623 631 1.153939 CCGAAGAGAGACGCCTGTG 60.154 63.158 0.00 0.00 0.00 3.66
624 632 2.344203 CCCGAAGAGAGACGCCTGT 61.344 63.158 0.00 0.00 0.00 4.00
625 633 2.492090 CCCGAAGAGAGACGCCTG 59.508 66.667 0.00 0.00 0.00 4.85
626 634 2.756283 CCCCGAAGAGAGACGCCT 60.756 66.667 0.00 0.00 0.00 5.52
627 635 3.066233 GACCCCGAAGAGAGACGCC 62.066 68.421 0.00 0.00 0.00 5.68
628 636 2.490685 GACCCCGAAGAGAGACGC 59.509 66.667 0.00 0.00 0.00 5.19
629 637 2.762234 CCGACCCCGAAGAGAGACG 61.762 68.421 0.00 0.00 38.22 4.18
630 638 2.416432 CCCGACCCCGAAGAGAGAC 61.416 68.421 0.00 0.00 38.22 3.36
631 639 2.044252 CCCGACCCCGAAGAGAGA 60.044 66.667 0.00 0.00 38.22 3.10
632 640 2.362632 ACCCGACCCCGAAGAGAG 60.363 66.667 0.00 0.00 38.22 3.20
633 641 2.362120 GACCCGACCCCGAAGAGA 60.362 66.667 0.00 0.00 38.22 3.10
634 642 3.823330 CGACCCGACCCCGAAGAG 61.823 72.222 0.00 0.00 38.22 2.85
643 651 3.756727 GACCTGACCCGACCCGAC 61.757 72.222 0.00 0.00 0.00 4.79
644 652 4.289101 TGACCTGACCCGACCCGA 62.289 66.667 0.00 0.00 0.00 5.14
645 653 3.760035 CTGACCTGACCCGACCCG 61.760 72.222 0.00 0.00 0.00 5.28
646 654 3.391382 CCTGACCTGACCCGACCC 61.391 72.222 0.00 0.00 0.00 4.46
647 655 2.603776 ACCTGACCTGACCCGACC 60.604 66.667 0.00 0.00 0.00 4.79
648 656 2.657237 CACCTGACCTGACCCGAC 59.343 66.667 0.00 0.00 0.00 4.79
649 657 3.311110 GCACCTGACCTGACCCGA 61.311 66.667 0.00 0.00 0.00 5.14
650 658 4.394712 GGCACCTGACCTGACCCG 62.395 72.222 0.00 0.00 0.00 5.28
668 676 3.436704 AGTTTCAAGTACCGCATGATGTG 59.563 43.478 0.00 0.00 0.00 3.21
669 677 3.674997 AGTTTCAAGTACCGCATGATGT 58.325 40.909 0.00 0.00 0.00 3.06
670 678 3.684305 TGAGTTTCAAGTACCGCATGATG 59.316 43.478 0.00 0.00 0.00 3.07
671 679 3.937814 TGAGTTTCAAGTACCGCATGAT 58.062 40.909 0.00 0.00 0.00 2.45
672 680 3.394674 TGAGTTTCAAGTACCGCATGA 57.605 42.857 0.00 0.00 0.00 3.07
673 681 4.070581 CTTGAGTTTCAAGTACCGCATG 57.929 45.455 10.00 0.00 46.50 4.06
683 691 0.934496 CCGTCGCACTTGAGTTTCAA 59.066 50.000 0.00 0.00 34.79 2.69
684 692 0.103390 TCCGTCGCACTTGAGTTTCA 59.897 50.000 0.00 0.00 0.00 2.69
685 693 0.507358 GTCCGTCGCACTTGAGTTTC 59.493 55.000 0.00 0.00 0.00 2.78
686 694 1.213094 CGTCCGTCGCACTTGAGTTT 61.213 55.000 0.00 0.00 0.00 2.66
687 695 1.660575 CGTCCGTCGCACTTGAGTT 60.661 57.895 0.00 0.00 0.00 3.01
688 696 2.050351 CGTCCGTCGCACTTGAGT 60.050 61.111 0.00 0.00 0.00 3.41
689 697 2.805353 CCGTCCGTCGCACTTGAG 60.805 66.667 0.00 0.00 38.35 3.02
690 698 3.289062 TCCGTCCGTCGCACTTGA 61.289 61.111 0.00 0.00 38.35 3.02
691 699 3.103911 GTCCGTCCGTCGCACTTG 61.104 66.667 0.00 0.00 38.35 3.16
692 700 4.695231 CGTCCGTCCGTCGCACTT 62.695 66.667 0.00 0.00 38.35 3.16
697 705 4.029186 TTGTCCGTCCGTCCGTCG 62.029 66.667 0.00 0.00 39.52 5.12
698 706 2.429739 GTTGTCCGTCCGTCCGTC 60.430 66.667 0.00 0.00 0.00 4.79
699 707 3.203546 CTGTTGTCCGTCCGTCCGT 62.204 63.158 0.00 0.00 0.00 4.69
700 708 1.855213 TACTGTTGTCCGTCCGTCCG 61.855 60.000 0.00 0.00 0.00 4.79
701 709 0.314935 TTACTGTTGTCCGTCCGTCC 59.685 55.000 0.00 0.00 0.00 4.79
702 710 1.668047 CCTTACTGTTGTCCGTCCGTC 60.668 57.143 0.00 0.00 0.00 4.79
703 711 0.316204 CCTTACTGTTGTCCGTCCGT 59.684 55.000 0.00 0.00 0.00 4.69
704 712 1.012486 GCCTTACTGTTGTCCGTCCG 61.012 60.000 0.00 0.00 0.00 4.79
705 713 0.672711 GGCCTTACTGTTGTCCGTCC 60.673 60.000 0.00 0.00 0.00 4.79
706 714 0.034337 TGGCCTTACTGTTGTCCGTC 59.966 55.000 3.32 0.00 0.00 4.79
707 715 0.470766 TTGGCCTTACTGTTGTCCGT 59.529 50.000 3.32 0.00 0.00 4.69
708 716 0.872388 GTTGGCCTTACTGTTGTCCG 59.128 55.000 3.32 0.00 0.00 4.79
709 717 2.152016 GAGTTGGCCTTACTGTTGTCC 58.848 52.381 14.68 0.00 0.00 4.02
710 718 2.152016 GGAGTTGGCCTTACTGTTGTC 58.848 52.381 14.68 2.03 0.00 3.18
711 719 1.493022 TGGAGTTGGCCTTACTGTTGT 59.507 47.619 14.68 0.00 0.00 3.32
712 720 1.880027 GTGGAGTTGGCCTTACTGTTG 59.120 52.381 14.68 0.00 0.00 3.33
713 721 1.202891 GGTGGAGTTGGCCTTACTGTT 60.203 52.381 14.68 0.00 0.00 3.16
714 722 0.400594 GGTGGAGTTGGCCTTACTGT 59.599 55.000 14.68 0.00 0.00 3.55
715 723 0.673644 CGGTGGAGTTGGCCTTACTG 60.674 60.000 14.68 1.82 0.00 2.74
716 724 1.677552 CGGTGGAGTTGGCCTTACT 59.322 57.895 3.32 7.65 0.00 2.24
717 725 2.038837 GCGGTGGAGTTGGCCTTAC 61.039 63.158 3.32 1.81 0.00 2.34
739 747 3.242291 GGGCGGACAGGATAGGGG 61.242 72.222 0.00 0.00 0.00 4.79
813 821 3.192633 GGACACAAAGTGGACACAAAGTT 59.807 43.478 5.14 0.00 37.94 2.66
1155 1171 1.395826 CCCTCCTCTTCGCCGATTCT 61.396 60.000 0.00 0.00 0.00 2.40
1258 1274 4.421479 CTTCTCGTCGGCAGCGGT 62.421 66.667 0.00 0.00 0.00 5.68
1631 1708 0.179040 GTCAAACAAGACACGGGGGA 60.179 55.000 0.00 0.00 38.40 4.81
1802 1880 1.668793 TAGTCAGCACGGTCGTCGA 60.669 57.895 7.78 0.00 42.43 4.20
1867 1945 5.999600 TGCTTTCTTCTTCTTCATCATCACA 59.000 36.000 0.00 0.00 0.00 3.58
1945 2035 1.543429 CCTCTTCTTTTGTGCCTCGGT 60.543 52.381 0.00 0.00 0.00 4.69
2357 2450 4.155826 TCCAAAGATTGAAATGCCTACACG 59.844 41.667 0.00 0.00 0.00 4.49
2436 2529 2.299867 ACTTGGGGCAATTGTTGATGAC 59.700 45.455 7.40 0.00 0.00 3.06
2453 2546 3.188460 CACGGTATTGGTCCTTGAACTTG 59.812 47.826 0.00 0.00 0.00 3.16
2591 2684 2.816746 ATGCAAGGCCATGGATGAC 58.183 52.632 18.40 7.81 29.45 3.06
2647 2740 1.816863 TTGCCGCTTCTTCTCGTCCT 61.817 55.000 0.00 0.00 0.00 3.85
2814 2907 0.109532 TTGTTGGCCTCGATGTCCAA 59.890 50.000 3.32 10.77 37.52 3.53
2843 2936 2.043953 TCGAGCTGCCTCTGCCTA 60.044 61.111 0.00 0.00 35.90 3.93
2869 2962 3.799286 TTGGTGGCGGCATTGGTGA 62.799 57.895 17.19 0.00 0.00 4.02
3150 3251 3.272334 CCTCGCCGGCAACATAGC 61.272 66.667 28.98 0.00 0.00 2.97
3151 3252 1.592669 CTCCTCGCCGGCAACATAG 60.593 63.158 28.98 14.39 0.00 2.23
3152 3253 1.609635 TTCTCCTCGCCGGCAACATA 61.610 55.000 28.98 6.26 0.00 2.29
3153 3254 2.954684 TTCTCCTCGCCGGCAACAT 61.955 57.895 28.98 0.00 0.00 2.71
3154 3255 3.621805 TTCTCCTCGCCGGCAACA 61.622 61.111 28.98 8.56 0.00 3.33
3155 3256 2.221906 TAGTTCTCCTCGCCGGCAAC 62.222 60.000 28.98 21.22 0.00 4.17
3156 3257 1.327690 ATAGTTCTCCTCGCCGGCAA 61.328 55.000 28.98 7.25 0.00 4.52
3157 3258 1.327690 AATAGTTCTCCTCGCCGGCA 61.328 55.000 28.98 12.94 0.00 5.69
3158 3259 0.179081 AAATAGTTCTCCTCGCCGGC 60.179 55.000 19.07 19.07 0.00 6.13
3159 3260 3.662247 ATAAATAGTTCTCCTCGCCGG 57.338 47.619 0.00 0.00 0.00 6.13
3160 3261 5.277345 CCAAAATAAATAGTTCTCCTCGCCG 60.277 44.000 0.00 0.00 0.00 6.46
3161 3262 5.820947 TCCAAAATAAATAGTTCTCCTCGCC 59.179 40.000 0.00 0.00 0.00 5.54
3162 3263 6.017852 CCTCCAAAATAAATAGTTCTCCTCGC 60.018 42.308 0.00 0.00 0.00 5.03
3163 3264 6.017852 GCCTCCAAAATAAATAGTTCTCCTCG 60.018 42.308 0.00 0.00 0.00 4.63
3368 3488 1.457643 CCGGGCCTGTCCTGAGATA 60.458 63.158 11.58 0.00 44.37 1.98
3416 3538 3.774702 GCGCGACCTCAAACGGAC 61.775 66.667 12.10 0.00 0.00 4.79
3417 3539 4.287781 TGCGCGACCTCAAACGGA 62.288 61.111 12.10 0.00 0.00 4.69
3418 3540 3.777925 CTGCGCGACCTCAAACGG 61.778 66.667 12.10 0.00 0.00 4.44
3420 3542 2.551270 CACTGCGCGACCTCAAAC 59.449 61.111 12.10 0.00 0.00 2.93
3421 3543 2.664851 CCACTGCGCGACCTCAAA 60.665 61.111 12.10 0.00 0.00 2.69
3422 3544 3.573772 CTCCACTGCGCGACCTCAA 62.574 63.158 12.10 0.00 0.00 3.02
3423 3545 4.056125 CTCCACTGCGCGACCTCA 62.056 66.667 12.10 0.00 0.00 3.86
3425 3547 3.616721 AACTCCACTGCGCGACCT 61.617 61.111 12.10 0.00 0.00 3.85
3427 3549 3.414700 CCAACTCCACTGCGCGAC 61.415 66.667 12.10 0.88 0.00 5.19
3430 3552 3.605749 TAGGCCAACTCCACTGCGC 62.606 63.158 5.01 0.00 0.00 6.09
3431 3553 0.392998 ATTAGGCCAACTCCACTGCG 60.393 55.000 5.01 0.00 0.00 5.18
3433 3555 2.086869 CACATTAGGCCAACTCCACTG 58.913 52.381 5.01 0.00 0.00 3.66
3434 3556 1.004745 CCACATTAGGCCAACTCCACT 59.995 52.381 5.01 0.00 0.00 4.00
3436 3558 0.331278 CCCACATTAGGCCAACTCCA 59.669 55.000 5.01 0.00 0.00 3.86
3437 3559 1.037579 GCCCACATTAGGCCAACTCC 61.038 60.000 5.01 0.00 45.16 3.85
3438 3560 2.493547 GCCCACATTAGGCCAACTC 58.506 57.895 5.01 0.00 45.16 3.01
3444 3566 0.947244 CGAGAATGCCCACATTAGGC 59.053 55.000 0.00 0.00 46.59 3.93
3445 3567 1.942657 CACGAGAATGCCCACATTAGG 59.057 52.381 0.00 0.00 46.59 2.69
3446 3568 1.942657 CCACGAGAATGCCCACATTAG 59.057 52.381 0.00 0.00 46.59 1.73
3454 3576 3.512516 GCTGGCCACGAGAATGCC 61.513 66.667 0.00 0.00 45.56 4.40
3455 3577 2.437359 AGCTGGCCACGAGAATGC 60.437 61.111 0.00 0.91 0.00 3.56
3456 3578 0.674581 TTGAGCTGGCCACGAGAATG 60.675 55.000 0.00 0.00 0.00 2.67
3463 3585 1.008538 CGTTTGTTGAGCTGGCCAC 60.009 57.895 0.00 0.00 0.00 5.01
3467 3589 1.238439 ATGACCGTTTGTTGAGCTGG 58.762 50.000 0.00 0.00 0.00 4.85
3494 4091 1.944024 TGACCGTTTGTTGACATGGTC 59.056 47.619 17.08 17.08 40.45 4.02
3495 4092 2.045561 TGACCGTTTGTTGACATGGT 57.954 45.000 0.00 3.73 0.00 3.55
3507 4104 1.270625 ACGATCCACACAATGACCGTT 60.271 47.619 0.00 0.00 0.00 4.44
3510 4107 2.386661 AGACGATCCACACAATGACC 57.613 50.000 0.00 0.00 0.00 4.02
3511 4108 4.111375 AGTAGACGATCCACACAATGAC 57.889 45.455 0.00 0.00 0.00 3.06
3512 4109 4.703093 TGTAGTAGACGATCCACACAATGA 59.297 41.667 0.00 0.00 0.00 2.57
3514 4111 4.705507 AGTGTAGTAGACGATCCACACAAT 59.294 41.667 5.57 0.00 38.93 2.71
3515 4112 4.077108 AGTGTAGTAGACGATCCACACAA 58.923 43.478 5.57 0.00 38.93 3.33
3517 4114 4.633126 TGTAGTGTAGTAGACGATCCACAC 59.367 45.833 0.00 0.00 37.21 3.82
3518 4115 4.633126 GTGTAGTGTAGTAGACGATCCACA 59.367 45.833 0.00 0.00 0.00 4.17
3519 4116 4.874966 AGTGTAGTGTAGTAGACGATCCAC 59.125 45.833 0.00 0.00 0.00 4.02
3520 4117 5.095145 AGTGTAGTGTAGTAGACGATCCA 57.905 43.478 0.00 0.00 0.00 3.41
3552 4149 3.312697 CAGCCCGTTTCTCTTATTTAGGC 59.687 47.826 0.00 0.00 38.16 3.93
3583 6162 0.892358 CCAGCACCAGCACATGTTCT 60.892 55.000 0.00 0.00 45.49 3.01
3591 6170 4.960866 CCAGCACCAGCACCAGCA 62.961 66.667 0.00 0.00 45.49 4.41
3641 6220 8.820153 AGTAGTACTGTAGTAGTAAAAGGCAT 57.180 34.615 5.39 0.00 43.24 4.40
3652 6231 8.562892 GCGGATTGAAATAGTAGTACTGTAGTA 58.437 37.037 13.29 0.00 0.00 1.82
3653 6232 7.424001 GCGGATTGAAATAGTAGTACTGTAGT 58.576 38.462 13.29 0.22 0.00 2.73
3654 6233 6.577800 CGCGGATTGAAATAGTAGTACTGTAG 59.422 42.308 13.29 0.00 0.00 2.74
3655 6234 6.260714 TCGCGGATTGAAATAGTAGTACTGTA 59.739 38.462 13.29 0.00 0.00 2.74
3656 6235 5.066893 TCGCGGATTGAAATAGTAGTACTGT 59.933 40.000 13.29 3.10 0.00 3.55
3657 6236 5.516996 TCGCGGATTGAAATAGTAGTACTG 58.483 41.667 13.29 0.00 0.00 2.74
3658 6237 5.762825 TCGCGGATTGAAATAGTAGTACT 57.237 39.130 6.13 8.14 0.00 2.73
3659 6238 5.745294 TGTTCGCGGATTGAAATAGTAGTAC 59.255 40.000 6.13 0.00 0.00 2.73
3682 6261 6.095432 TGGATTATTCCGCCCAAAATATTG 57.905 37.500 0.00 0.00 45.89 1.90
3693 6272 3.820467 TGATTGGTCATGGATTATTCCGC 59.180 43.478 0.00 0.00 45.89 5.54
3708 6287 3.490348 CTCAGGGACTTGTTTGATTGGT 58.510 45.455 0.00 0.00 34.60 3.67
3725 6304 1.153289 CGGGCATTGTCTCCCTCAG 60.153 63.158 0.00 0.00 40.41 3.35
3740 6319 2.403252 AATAGAAAGGTCAGCACGGG 57.597 50.000 0.00 0.00 0.00 5.28
3819 6403 4.423209 GCAGAGGGGAGGGAGGGT 62.423 72.222 0.00 0.00 0.00 4.34
3921 6505 4.214758 GCCTGTTCCACGTTTTTGTATAGT 59.785 41.667 0.00 0.00 0.00 2.12
3922 6506 4.454504 AGCCTGTTCCACGTTTTTGTATAG 59.545 41.667 0.00 0.00 0.00 1.31
3945 6534 2.281484 GTCGGCTGCTGGGTTTGA 60.281 61.111 8.89 0.00 0.00 2.69
3946 6535 3.726517 CGTCGGCTGCTGGGTTTG 61.727 66.667 8.89 0.00 0.00 2.93
3947 6536 3.936203 TCGTCGGCTGCTGGGTTT 61.936 61.111 8.89 0.00 0.00 3.27
3948 6537 4.681978 GTCGTCGGCTGCTGGGTT 62.682 66.667 8.89 0.00 0.00 4.11
3951 6540 3.989698 ATTCGTCGTCGGCTGCTGG 62.990 63.158 8.89 0.00 37.69 4.85
3952 6541 2.507102 ATTCGTCGTCGGCTGCTG 60.507 61.111 0.95 0.95 37.69 4.41
3953 6542 2.202623 GATTCGTCGTCGGCTGCT 60.203 61.111 1.55 0.00 37.69 4.24
3954 6543 3.607987 CGATTCGTCGTCGGCTGC 61.608 66.667 1.55 0.00 35.55 5.25
3996 6585 2.505118 GAGCTCTGCGTCACCGTC 60.505 66.667 6.43 0.00 36.15 4.79
4009 6598 3.278668 AAGTAAGAGCATGCATGAGCT 57.721 42.857 30.64 20.72 45.25 4.09
4024 6616 8.001881 TGTTTGAAAAATGGTGAGCTAAGTAA 57.998 30.769 0.00 0.00 0.00 2.24
4027 6625 8.514594 TCTATGTTTGAAAAATGGTGAGCTAAG 58.485 33.333 0.00 0.00 0.00 2.18
4029 6627 7.882791 TCTCTATGTTTGAAAAATGGTGAGCTA 59.117 33.333 0.00 0.00 0.00 3.32
4081 6712 1.608590 TCGACGGGTTAGACTTTTCGT 59.391 47.619 0.00 0.00 0.00 3.85
4091 6722 5.294060 GGCAATTTAACTATTCGACGGGTTA 59.706 40.000 0.00 0.00 0.00 2.85
4102 6733 4.013728 TGAACTGCCGGCAATTTAACTAT 58.986 39.130 32.09 2.30 0.00 2.12
4131 6762 1.173444 ACTCTTCGCTCACTCGGTGT 61.173 55.000 4.33 0.00 34.79 4.16
4183 8688 1.922135 CTGGTGCCGCAACATGGTAC 61.922 60.000 12.49 0.00 40.89 3.34
4184 8689 1.673993 CTGGTGCCGCAACATGGTA 60.674 57.895 12.49 0.00 27.67 3.25
4186 8691 4.424566 GCTGGTGCCGCAACATGG 62.425 66.667 12.49 2.05 27.67 3.66
4187 8692 3.620300 CTGCTGGTGCCGCAACATG 62.620 63.158 12.49 7.49 36.88 3.21
4188 8693 2.746412 TACTGCTGGTGCCGCAACAT 62.746 55.000 12.49 0.00 36.88 2.71
4263 8773 2.660552 CGTGTCGAAAGTGGGCGT 60.661 61.111 0.00 0.00 0.00 5.68
4317 8844 5.316167 TCTTTGTGTTTACATGCCATCTCT 58.684 37.500 0.00 0.00 36.53 3.10
4321 8848 6.209192 TGAATCTCTTTGTGTTTACATGCCAT 59.791 34.615 0.00 0.00 36.53 4.40
4322 8849 5.534278 TGAATCTCTTTGTGTTTACATGCCA 59.466 36.000 0.00 0.00 36.53 4.92
4324 8851 6.672147 AGTGAATCTCTTTGTGTTTACATGC 58.328 36.000 0.00 0.00 36.53 4.06
4339 8870 8.256611 TGTTGCATTAAGAACTAGTGAATCTC 57.743 34.615 0.00 0.00 0.00 2.75
4420 8956 3.507924 GCATTCGATGTGGGCGCA 61.508 61.111 10.83 0.00 0.00 6.09
4449 8985 3.555527 ATGTGAGTGTGGGATGATCAG 57.444 47.619 0.09 0.00 0.00 2.90
4468 9004 1.602237 CCGGTGACTTGTGGGCTAT 59.398 57.895 0.00 0.00 0.00 2.97
4469 9005 3.065306 CCGGTGACTTGTGGGCTA 58.935 61.111 0.00 0.00 0.00 3.93
4471 9007 4.947147 TGCCGGTGACTTGTGGGC 62.947 66.667 1.90 0.00 44.00 5.36
4472 9008 1.826054 TTTGCCGGTGACTTGTGGG 60.826 57.895 1.90 0.00 0.00 4.61
4473 9009 1.358759 GTTTGCCGGTGACTTGTGG 59.641 57.895 1.90 0.00 0.00 4.17
4475 9011 3.836151 GGTTTGCCGGTGACTTGT 58.164 55.556 1.90 0.00 0.00 3.16
4485 9021 1.887344 ATGATGGGTTGCGGTTTGCC 61.887 55.000 0.00 0.00 45.60 4.52
4493 9031 2.020131 CTCTCGCATGATGGGTTGC 58.980 57.895 9.39 0.00 35.50 4.17
4495 9033 1.603842 TGCTCTCGCATGATGGGTT 59.396 52.632 9.39 0.00 42.25 4.11
4515 9053 3.194116 GCAATTTGCAGGAGATTCTCCAA 59.806 43.478 29.87 17.81 45.54 3.53
4567 9107 5.995897 AGCTTTCTACCGAATTAAACAGTGT 59.004 36.000 0.00 0.00 0.00 3.55
4581 9121 4.807443 ACGTCTTGTTAGAGCTTTCTACC 58.193 43.478 0.00 0.00 0.00 3.18
4604 9145 5.163281 AGAAAGAATCATCTGTGCTCACT 57.837 39.130 1.47 0.00 35.59 3.41
4611 9152 3.011032 AGGGCCAAGAAAGAATCATCTGT 59.989 43.478 6.18 0.00 35.59 3.41
4614 9155 5.411831 AAAAGGGCCAAGAAAGAATCATC 57.588 39.130 6.18 0.00 0.00 2.92
4655 9208 2.354539 CCCGCCAACTTTTGCACG 60.355 61.111 0.00 0.00 0.00 5.34
4681 9234 3.576982 TCTGACCCGAGTTATTGTTGAGT 59.423 43.478 0.00 0.00 0.00 3.41
4686 9239 1.899814 TGCTCTGACCCGAGTTATTGT 59.100 47.619 0.00 0.00 33.55 2.71
4724 9277 3.425525 CGAACCGGACTAATCAATGATCG 59.574 47.826 9.46 0.00 0.00 3.69
4882 9631 2.154567 TGAATACTCCTACCGCCAGT 57.845 50.000 0.00 0.00 0.00 4.00
4883 9632 4.079970 TCTATGAATACTCCTACCGCCAG 58.920 47.826 0.00 0.00 0.00 4.85
4884 9633 3.825014 GTCTATGAATACTCCTACCGCCA 59.175 47.826 0.00 0.00 0.00 5.69
4885 9634 3.193056 GGTCTATGAATACTCCTACCGCC 59.807 52.174 0.00 0.00 0.00 6.13
4886 9635 3.825014 TGGTCTATGAATACTCCTACCGC 59.175 47.826 0.00 0.00 0.00 5.68
4887 9636 5.125739 GGATGGTCTATGAATACTCCTACCG 59.874 48.000 0.00 0.00 0.00 4.02
4888 9637 6.017192 TGGATGGTCTATGAATACTCCTACC 58.983 44.000 0.00 0.00 0.00 3.18
4889 9638 7.415765 CGATGGATGGTCTATGAATACTCCTAC 60.416 44.444 0.00 0.00 0.00 3.18
4890 9639 6.603599 CGATGGATGGTCTATGAATACTCCTA 59.396 42.308 0.00 0.00 0.00 2.94
4926 9678 1.529438 GTGCTGTCCGAACGAAATTCA 59.471 47.619 0.00 0.00 37.12 2.57
4928 9680 1.588674 TGTGCTGTCCGAACGAAATT 58.411 45.000 0.00 0.00 0.00 1.82
4984 9736 4.882396 TCCGGTGGGGGTGTGTGA 62.882 66.667 0.00 0.00 36.01 3.58
4986 9738 3.327404 GATCCGGTGGGGGTGTGT 61.327 66.667 0.00 0.00 36.01 3.72
4987 9739 3.009115 AGATCCGGTGGGGGTGTG 61.009 66.667 0.00 0.00 36.01 3.82
4988 9740 2.687566 GAGATCCGGTGGGGGTGT 60.688 66.667 0.00 0.00 36.01 4.16
4989 9741 2.365635 AGAGATCCGGTGGGGGTG 60.366 66.667 0.00 0.00 36.01 4.61
4990 9742 2.041819 GAGAGATCCGGTGGGGGT 60.042 66.667 0.00 0.00 36.01 4.95
4991 9743 1.834822 GAGAGAGATCCGGTGGGGG 60.835 68.421 0.00 0.00 36.01 5.40
4992 9744 2.196925 CGAGAGAGATCCGGTGGGG 61.197 68.421 0.00 0.00 37.02 4.96
4999 9751 3.120338 CGAGTTATGAGCGAGAGAGATCC 60.120 52.174 0.00 0.00 0.00 3.36
5162 9914 1.714794 GATCACTACGTTGCACAGCT 58.285 50.000 0.00 0.00 0.00 4.24
5163 9915 0.366871 CGATCACTACGTTGCACAGC 59.633 55.000 0.00 0.00 0.00 4.40
5164 9916 0.992072 CCGATCACTACGTTGCACAG 59.008 55.000 0.00 0.00 0.00 3.66
5166 9918 1.693083 GCCCGATCACTACGTTGCAC 61.693 60.000 0.00 0.00 0.00 4.57
5167 9919 1.447140 GCCCGATCACTACGTTGCA 60.447 57.895 0.00 0.00 0.00 4.08
5168 9920 1.421410 CTGCCCGATCACTACGTTGC 61.421 60.000 0.00 0.00 0.00 4.17
5172 9932 1.589993 CAGCTGCCCGATCACTACG 60.590 63.158 0.00 0.00 0.00 3.51
5174 9934 0.175760 GTTCAGCTGCCCGATCACTA 59.824 55.000 9.47 0.00 0.00 2.74
5192 9952 1.263217 GCCGAACAATTTGTGACGAGT 59.737 47.619 22.06 0.96 34.62 4.18
5198 9958 1.732683 GCCGGCCGAACAATTTGTG 60.733 57.895 30.73 6.52 0.00 3.33
5199 9959 1.739338 TTGCCGGCCGAACAATTTGT 61.739 50.000 30.73 0.00 0.00 2.83
5213 9981 2.430244 CTGCTTGCTTGCTTGCCG 60.430 61.111 3.47 0.00 0.00 5.69
5214 9982 2.048503 CCTGCTTGCTTGCTTGCC 60.049 61.111 3.47 0.00 0.00 4.52
5230 9998 1.553690 TTACTCCTGTCCTGCCTGCC 61.554 60.000 0.00 0.00 0.00 4.85
5234 10002 2.772515 AGGTTATTACTCCTGTCCTGCC 59.227 50.000 0.00 0.00 32.29 4.85
5241 10009 6.295719 ACCACAACTAGGTTATTACTCCTG 57.704 41.667 0.00 0.00 35.33 3.86
5243 10011 9.924650 CATATACCACAACTAGGTTATTACTCC 57.075 37.037 0.00 0.00 40.54 3.85
5248 10016 9.609346 GTTGACATATACCACAACTAGGTTATT 57.391 33.333 0.00 0.00 40.54 1.40
5249 10017 7.924412 CGTTGACATATACCACAACTAGGTTAT 59.076 37.037 0.00 0.00 40.54 1.89
5250 10018 7.259882 CGTTGACATATACCACAACTAGGTTA 58.740 38.462 0.00 0.00 40.54 2.85
5251 10019 6.103997 CGTTGACATATACCACAACTAGGTT 58.896 40.000 0.00 0.00 40.54 3.50
5252 10020 5.394883 CCGTTGACATATACCACAACTAGGT 60.395 44.000 0.00 0.00 43.14 3.08
5253 10021 5.047847 CCGTTGACATATACCACAACTAGG 58.952 45.833 0.00 0.00 39.92 3.02
5254 10022 5.898174 TCCGTTGACATATACCACAACTAG 58.102 41.667 0.00 0.00 39.92 2.57
5262 10030 5.007385 AGAACACTCCGTTGACATATACC 57.993 43.478 0.00 0.00 38.19 2.73
5309 10077 8.408043 TTTACATCTTGTCCATTTGTGAAGAT 57.592 30.769 0.00 0.00 34.42 2.40
5347 10115 4.702196 TCCCAATTACTACCACCCTTAGT 58.298 43.478 0.00 0.00 34.15 2.24
5369 10140 7.010160 TCTTTAGTTTTCCTTCATCACCCAAT 58.990 34.615 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.