Multiple sequence alignment - TraesCS6B01G289500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G289500 | chr6B | 100.000 | 3679 | 0 | 0 | 1 | 3679 | 520849547 | 520845869 | 0.000000e+00 | 6794.0 |
1 | TraesCS6B01G289500 | chr6B | 95.690 | 116 | 4 | 1 | 349 | 463 | 5734895 | 5735010 | 6.270000e-43 | 185.0 |
2 | TraesCS6B01G289500 | chr6B | 94.118 | 119 | 5 | 2 | 345 | 462 | 684144924 | 684144807 | 2.920000e-41 | 180.0 |
3 | TraesCS6B01G289500 | chr6D | 90.500 | 2400 | 81 | 45 | 627 | 2940 | 345047838 | 345045500 | 0.000000e+00 | 3033.0 |
4 | TraesCS6B01G289500 | chr6D | 87.237 | 760 | 54 | 16 | 2934 | 3667 | 345045476 | 345044734 | 0.000000e+00 | 826.0 |
5 | TraesCS6B01G289500 | chr6D | 86.022 | 186 | 3 | 5 | 457 | 642 | 345048015 | 345047853 | 1.050000e-40 | 178.0 |
6 | TraesCS6B01G289500 | chr6D | 92.742 | 124 | 5 | 3 | 334 | 455 | 81674623 | 81674744 | 3.780000e-40 | 176.0 |
7 | TraesCS6B01G289500 | chr6D | 86.885 | 61 | 6 | 2 | 10 | 69 | 345048852 | 345048793 | 2.370000e-07 | 67.6 |
8 | TraesCS6B01G289500 | chr6A | 88.806 | 2537 | 97 | 68 | 457 | 2940 | 485379206 | 485376804 | 0.000000e+00 | 2939.0 |
9 | TraesCS6B01G289500 | chr6A | 85.602 | 764 | 42 | 27 | 2932 | 3667 | 485376782 | 485376059 | 0.000000e+00 | 739.0 |
10 | TraesCS6B01G289500 | chr5A | 97.345 | 113 | 3 | 0 | 346 | 458 | 706334494 | 706334606 | 3.750000e-45 | 193.0 |
11 | TraesCS6B01G289500 | chr3B | 94.355 | 124 | 4 | 3 | 349 | 471 | 673098620 | 673098741 | 1.740000e-43 | 187.0 |
12 | TraesCS6B01G289500 | chr5D | 96.429 | 112 | 4 | 0 | 345 | 456 | 564839092 | 564839203 | 6.270000e-43 | 185.0 |
13 | TraesCS6B01G289500 | chr3D | 96.429 | 112 | 4 | 0 | 348 | 459 | 614541799 | 614541910 | 6.270000e-43 | 185.0 |
14 | TraesCS6B01G289500 | chr2A | 95.690 | 116 | 4 | 1 | 348 | 462 | 3757517 | 3757402 | 6.270000e-43 | 185.0 |
15 | TraesCS6B01G289500 | chr1B | 96.396 | 111 | 4 | 0 | 349 | 459 | 461239277 | 461239167 | 2.260000e-42 | 183.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G289500 | chr6B | 520845869 | 520849547 | 3678 | True | 6794.00 | 6794 | 100.000 | 1 | 3679 | 1 | chr6B.!!$R1 | 3678 |
1 | TraesCS6B01G289500 | chr6D | 345044734 | 345048852 | 4118 | True | 1026.15 | 3033 | 87.661 | 10 | 3667 | 4 | chr6D.!!$R1 | 3657 |
2 | TraesCS6B01G289500 | chr6A | 485376059 | 485379206 | 3147 | True | 1839.00 | 2939 | 87.204 | 457 | 3667 | 2 | chr6A.!!$R1 | 3210 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
846 | 1403 | 0.672401 | TTTTAAGGGGAGCGTGCGAG | 60.672 | 55.0 | 0.0 | 0.0 | 0.0 | 5.03 | F |
1032 | 1597 | 0.105709 | CCTCCTCCTCCTCCTCCTTC | 60.106 | 65.0 | 0.0 | 0.0 | 0.0 | 3.46 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2654 | 3275 | 0.604780 | CAGCACAGCACAGCCTTACT | 60.605 | 55.0 | 0.0 | 0.0 | 0.0 | 2.24 | R |
2997 | 3676 | 0.473694 | TGCCTCCCCACTCTTCTTCA | 60.474 | 55.0 | 0.0 | 0.0 | 0.0 | 3.02 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
46 | 47 | 9.976511 | TTCGATTATTGACTAAATAAGGATCGT | 57.023 | 29.630 | 0.00 | 0.00 | 42.58 | 3.73 |
47 | 48 | 9.976511 | TCGATTATTGACTAAATAAGGATCGTT | 57.023 | 29.630 | 5.87 | 5.87 | 42.58 | 3.85 |
87 | 121 | 2.464865 | CAGCTCGAAGGATCTAAACCG | 58.535 | 52.381 | 0.00 | 0.00 | 0.00 | 4.44 |
94 | 447 | 5.585390 | TCGAAGGATCTAAACCGTTGATAC | 58.415 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
100 | 453 | 6.489361 | AGGATCTAAACCGTTGATACGTAGAT | 59.511 | 38.462 | 0.08 | 8.24 | 46.20 | 1.98 |
102 | 455 | 7.961827 | GGATCTAAACCGTTGATACGTAGATAG | 59.038 | 40.741 | 0.08 | 0.00 | 46.20 | 2.08 |
122 | 475 | 1.141858 | GAGGTTGTGATCCCTCCATCC | 59.858 | 57.143 | 4.78 | 0.00 | 41.22 | 3.51 |
124 | 477 | 1.496429 | GGTTGTGATCCCTCCATCCAT | 59.504 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
129 | 482 | 6.467194 | GGTTGTGATCCCTCCATCCATAAATA | 60.467 | 42.308 | 0.00 | 0.00 | 0.00 | 1.40 |
137 | 490 | 6.451340 | TCCCTCCATCCATAAATATAAGGCAT | 59.549 | 38.462 | 0.00 | 0.00 | 0.00 | 4.40 |
172 | 525 | 7.672983 | TGAGATTTACTTTGACCATCACTTC | 57.327 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
181 | 576 | 2.158914 | TGACCATCACTTCATATGCGCT | 60.159 | 45.455 | 9.73 | 0.00 | 0.00 | 5.92 |
187 | 582 | 6.127758 | ACCATCACTTCATATGCGCTTTAAAA | 60.128 | 34.615 | 9.73 | 0.00 | 0.00 | 1.52 |
197 | 592 | 4.603231 | TGCGCTTTAAAAAGGTATACGG | 57.397 | 40.909 | 9.73 | 0.00 | 36.53 | 4.02 |
200 | 595 | 4.780013 | GCGCTTTAAAAAGGTATACGGACG | 60.780 | 45.833 | 0.00 | 0.00 | 36.53 | 4.79 |
201 | 596 | 4.259930 | CGCTTTAAAAAGGTATACGGACGG | 60.260 | 45.833 | 4.71 | 0.00 | 36.53 | 4.79 |
206 | 601 | 5.349061 | AAAAAGGTATACGGACGGATTCT | 57.651 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
215 | 610 | 7.115947 | GGTATACGGACGGATTCTTATTTGAAG | 59.884 | 40.741 | 0.00 | 0.00 | 0.00 | 3.02 |
217 | 612 | 3.560068 | CGGACGGATTCTTATTTGAAGGG | 59.440 | 47.826 | 0.00 | 0.00 | 0.00 | 3.95 |
222 | 617 | 5.880887 | ACGGATTCTTATTTGAAGGGAGTTC | 59.119 | 40.000 | 0.00 | 0.00 | 35.48 | 3.01 |
289 | 684 | 8.965986 | TCTTATCGTGGTCAATATAAATCTCG | 57.034 | 34.615 | 0.00 | 0.00 | 0.00 | 4.04 |
290 | 685 | 8.789762 | TCTTATCGTGGTCAATATAAATCTCGA | 58.210 | 33.333 | 0.00 | 0.00 | 0.00 | 4.04 |
291 | 686 | 9.406828 | CTTATCGTGGTCAATATAAATCTCGAA | 57.593 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
292 | 687 | 9.752961 | TTATCGTGGTCAATATAAATCTCGAAA | 57.247 | 29.630 | 0.00 | 0.00 | 0.00 | 3.46 |
293 | 688 | 8.657074 | ATCGTGGTCAATATAAATCTCGAAAA | 57.343 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
294 | 689 | 8.657074 | TCGTGGTCAATATAAATCTCGAAAAT | 57.343 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
295 | 690 | 9.752961 | TCGTGGTCAATATAAATCTCGAAAATA | 57.247 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
296 | 691 | 9.793245 | CGTGGTCAATATAAATCTCGAAAATAC | 57.207 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
297 | 692 | 9.793245 | GTGGTCAATATAAATCTCGAAAATACG | 57.207 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
298 | 693 | 8.492748 | TGGTCAATATAAATCTCGAAAATACGC | 58.507 | 33.333 | 0.00 | 0.00 | 0.00 | 4.42 |
299 | 694 | 8.492748 | GGTCAATATAAATCTCGAAAATACGCA | 58.507 | 33.333 | 0.00 | 0.00 | 0.00 | 5.24 |
300 | 695 | 9.858247 | GTCAATATAAATCTCGAAAATACGCAA | 57.142 | 29.630 | 0.00 | 0.00 | 0.00 | 4.85 |
306 | 701 | 7.534085 | AAATCTCGAAAATACGCAATAGACA | 57.466 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
307 | 702 | 5.944049 | TCTCGAAAATACGCAATAGACAC | 57.056 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
308 | 703 | 5.647589 | TCTCGAAAATACGCAATAGACACT | 58.352 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
309 | 704 | 6.788243 | TCTCGAAAATACGCAATAGACACTA | 58.212 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
310 | 705 | 6.690098 | TCTCGAAAATACGCAATAGACACTAC | 59.310 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
311 | 706 | 6.324042 | TCGAAAATACGCAATAGACACTACA | 58.676 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
312 | 707 | 6.976349 | TCGAAAATACGCAATAGACACTACAT | 59.024 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
313 | 708 | 7.490079 | TCGAAAATACGCAATAGACACTACATT | 59.510 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
314 | 709 | 7.787935 | CGAAAATACGCAATAGACACTACATTC | 59.212 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
315 | 710 | 8.487313 | AAAATACGCAATAGACACTACATTCA | 57.513 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
316 | 711 | 8.662781 | AAATACGCAATAGACACTACATTCAT | 57.337 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
317 | 712 | 5.973651 | ACGCAATAGACACTACATTCATG | 57.026 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
318 | 713 | 4.811024 | ACGCAATAGACACTACATTCATGG | 59.189 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
319 | 714 | 5.049828 | CGCAATAGACACTACATTCATGGA | 58.950 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
320 | 715 | 5.698089 | CGCAATAGACACTACATTCATGGAT | 59.302 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
321 | 716 | 6.868339 | CGCAATAGACACTACATTCATGGATA | 59.132 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
322 | 717 | 7.062722 | CGCAATAGACACTACATTCATGGATAG | 59.937 | 40.741 | 0.00 | 0.00 | 0.00 | 2.08 |
323 | 718 | 8.090831 | GCAATAGACACTACATTCATGGATAGA | 58.909 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
324 | 719 | 9.636879 | CAATAGACACTACATTCATGGATAGAG | 57.363 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
325 | 720 | 8.948401 | ATAGACACTACATTCATGGATAGAGT | 57.052 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
326 | 721 | 7.048629 | AGACACTACATTCATGGATAGAGTG | 57.951 | 40.000 | 19.29 | 19.29 | 39.14 | 3.51 |
327 | 722 | 6.836007 | AGACACTACATTCATGGATAGAGTGA | 59.164 | 38.462 | 24.52 | 0.00 | 37.18 | 3.41 |
328 | 723 | 7.014134 | AGACACTACATTCATGGATAGAGTGAG | 59.986 | 40.741 | 24.52 | 8.15 | 37.18 | 3.51 |
329 | 724 | 6.609212 | ACACTACATTCATGGATAGAGTGAGT | 59.391 | 38.462 | 24.52 | 8.67 | 37.18 | 3.41 |
330 | 725 | 7.780271 | ACACTACATTCATGGATAGAGTGAGTA | 59.220 | 37.037 | 24.52 | 6.28 | 37.18 | 2.59 |
331 | 726 | 8.633561 | CACTACATTCATGGATAGAGTGAGTAA | 58.366 | 37.037 | 17.25 | 0.00 | 36.07 | 2.24 |
332 | 727 | 9.373450 | ACTACATTCATGGATAGAGTGAGTAAT | 57.627 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
333 | 728 | 9.853555 | CTACATTCATGGATAGAGTGAGTAATC | 57.146 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
334 | 729 | 8.489676 | ACATTCATGGATAGAGTGAGTAATCT | 57.510 | 34.615 | 0.00 | 0.00 | 35.14 | 2.40 |
335 | 730 | 8.932610 | ACATTCATGGATAGAGTGAGTAATCTT | 58.067 | 33.333 | 0.00 | 0.00 | 32.72 | 2.40 |
336 | 731 | 9.775854 | CATTCATGGATAGAGTGAGTAATCTTT | 57.224 | 33.333 | 0.00 | 0.00 | 32.72 | 2.52 |
338 | 733 | 9.605275 | TTCATGGATAGAGTGAGTAATCTTTTG | 57.395 | 33.333 | 0.00 | 0.00 | 32.72 | 2.44 |
339 | 734 | 8.981659 | TCATGGATAGAGTGAGTAATCTTTTGA | 58.018 | 33.333 | 0.00 | 0.00 | 32.72 | 2.69 |
340 | 735 | 9.775854 | CATGGATAGAGTGAGTAATCTTTTGAT | 57.224 | 33.333 | 0.00 | 0.00 | 41.73 | 2.57 |
347 | 742 | 9.220767 | AGAGTGAGTAATCTTTTGATAAACACC | 57.779 | 33.333 | 0.00 | 0.00 | 38.40 | 4.16 |
360 | 755 | 1.725803 | AAACACCTACTCCCTCCGTT | 58.274 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
362 | 757 | 0.964358 | ACACCTACTCCCTCCGTTCG | 60.964 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
363 | 758 | 1.379576 | ACCTACTCCCTCCGTTCGG | 60.380 | 63.158 | 4.74 | 4.74 | 0.00 | 4.30 |
369 | 764 | 1.755380 | ACTCCCTCCGTTCGGAATTAG | 59.245 | 52.381 | 14.79 | 13.09 | 33.41 | 1.73 |
371 | 766 | 2.167900 | CTCCCTCCGTTCGGAATTAGTT | 59.832 | 50.000 | 14.79 | 0.00 | 33.41 | 2.24 |
377 | 772 | 1.722464 | CGTTCGGAATTAGTTGTCGCA | 59.278 | 47.619 | 0.00 | 0.00 | 0.00 | 5.10 |
387 | 782 | 4.944962 | TTAGTTGTCGCAGAAATGGATG | 57.055 | 40.909 | 0.00 | 0.00 | 39.69 | 3.51 |
396 | 791 | 6.015095 | TGTCGCAGAAATGGATGTATCTAGAT | 60.015 | 38.462 | 10.73 | 10.73 | 39.69 | 1.98 |
397 | 792 | 6.309980 | GTCGCAGAAATGGATGTATCTAGATG | 59.690 | 42.308 | 15.79 | 0.00 | 39.69 | 2.90 |
400 | 795 | 7.978414 | CGCAGAAATGGATGTATCTAGATGTAT | 59.022 | 37.037 | 15.79 | 9.11 | 0.00 | 2.29 |
401 | 796 | 9.664332 | GCAGAAATGGATGTATCTAGATGTATT | 57.336 | 33.333 | 15.79 | 4.32 | 0.00 | 1.89 |
470 | 961 | 6.822170 | GGAGGGAGTAGTAACAAATACCAAAG | 59.178 | 42.308 | 0.00 | 0.00 | 34.89 | 2.77 |
500 | 991 | 3.869065 | TGGACGAGTAATCCATCCAAAC | 58.131 | 45.455 | 8.06 | 0.00 | 41.47 | 2.93 |
501 | 992 | 3.517901 | TGGACGAGTAATCCATCCAAACT | 59.482 | 43.478 | 8.06 | 0.00 | 41.47 | 2.66 |
504 | 995 | 5.414765 | GGACGAGTAATCCATCCAAACTTTT | 59.585 | 40.000 | 3.80 | 0.00 | 36.15 | 2.27 |
641 | 1162 | 3.845109 | ACCACCACCCCATTTTAATCT | 57.155 | 42.857 | 0.00 | 0.00 | 0.00 | 2.40 |
751 | 1287 | 3.615224 | AACCCCGCGAGTAATTTTAGA | 57.385 | 42.857 | 8.23 | 0.00 | 0.00 | 2.10 |
752 | 1288 | 3.832615 | ACCCCGCGAGTAATTTTAGAT | 57.167 | 42.857 | 8.23 | 0.00 | 0.00 | 1.98 |
754 | 1290 | 5.280654 | ACCCCGCGAGTAATTTTAGATTA | 57.719 | 39.130 | 8.23 | 0.00 | 0.00 | 1.75 |
804 | 1354 | 4.003788 | CCCCGTCTGCGTCCTGTT | 62.004 | 66.667 | 0.00 | 0.00 | 36.15 | 3.16 |
805 | 1355 | 2.432628 | CCCGTCTGCGTCCTGTTC | 60.433 | 66.667 | 0.00 | 0.00 | 36.15 | 3.18 |
806 | 1356 | 2.432628 | CCGTCTGCGTCCTGTTCC | 60.433 | 66.667 | 0.00 | 0.00 | 36.15 | 3.62 |
807 | 1357 | 2.432628 | CGTCTGCGTCCTGTTCCC | 60.433 | 66.667 | 0.00 | 0.00 | 0.00 | 3.97 |
846 | 1403 | 0.672401 | TTTTAAGGGGAGCGTGCGAG | 60.672 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
878 | 1435 | 2.172483 | AATTGGACTCGGCTCACGCT | 62.172 | 55.000 | 0.00 | 0.00 | 43.86 | 5.07 |
911 | 1468 | 4.567385 | GCTCGCGCTGAGGAGGAG | 62.567 | 72.222 | 23.77 | 14.45 | 45.38 | 3.69 |
912 | 1469 | 3.898509 | CTCGCGCTGAGGAGGAGG | 61.899 | 72.222 | 17.74 | 0.00 | 41.29 | 4.30 |
913 | 1470 | 4.426313 | TCGCGCTGAGGAGGAGGA | 62.426 | 66.667 | 5.56 | 0.00 | 0.00 | 3.71 |
914 | 1471 | 4.200283 | CGCGCTGAGGAGGAGGAC | 62.200 | 72.222 | 5.56 | 0.00 | 0.00 | 3.85 |
915 | 1472 | 4.200283 | GCGCTGAGGAGGAGGACG | 62.200 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
916 | 1473 | 2.438614 | CGCTGAGGAGGAGGACGA | 60.439 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
917 | 1474 | 1.826054 | CGCTGAGGAGGAGGACGAT | 60.826 | 63.158 | 0.00 | 0.00 | 0.00 | 3.73 |
918 | 1475 | 1.739049 | GCTGAGGAGGAGGACGATG | 59.261 | 63.158 | 0.00 | 0.00 | 0.00 | 3.84 |
919 | 1476 | 1.739049 | CTGAGGAGGAGGACGATGC | 59.261 | 63.158 | 0.00 | 0.00 | 0.00 | 3.91 |
920 | 1477 | 1.743321 | CTGAGGAGGAGGACGATGCC | 61.743 | 65.000 | 0.00 | 0.00 | 0.00 | 4.40 |
921 | 1478 | 2.444895 | AGGAGGAGGACGATGCCC | 60.445 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
922 | 1479 | 2.444895 | GGAGGAGGACGATGCCCT | 60.445 | 66.667 | 0.00 | 0.00 | 36.57 | 5.19 |
926 | 1483 | 3.635510 | GAGGACGATGCCCTCCTT | 58.364 | 61.111 | 0.00 | 0.00 | 43.37 | 3.36 |
1005 | 1562 | 2.084681 | CCCGTCGTCCGTTTCTTCG | 61.085 | 63.158 | 0.00 | 0.00 | 33.66 | 3.79 |
1006 | 1563 | 1.370900 | CCGTCGTCCGTTTCTTCGT | 60.371 | 57.895 | 0.00 | 0.00 | 33.66 | 3.85 |
1009 | 1566 | 1.763634 | GTCGTCCGTTTCTTCGTTCT | 58.236 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1015 | 1572 | 2.626743 | TCCGTTTCTTCGTTCTTCTCCT | 59.373 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
1025 | 1590 | 2.384828 | GTTCTTCTCCTCCTCCTCCTC | 58.615 | 57.143 | 0.00 | 0.00 | 0.00 | 3.71 |
1026 | 1591 | 0.930726 | TCTTCTCCTCCTCCTCCTCC | 59.069 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1027 | 1592 | 0.933700 | CTTCTCCTCCTCCTCCTCCT | 59.066 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1028 | 1593 | 0.930726 | TTCTCCTCCTCCTCCTCCTC | 59.069 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1029 | 1594 | 0.996762 | TCTCCTCCTCCTCCTCCTCC | 60.997 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1030 | 1595 | 0.998945 | CTCCTCCTCCTCCTCCTCCT | 60.999 | 65.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1031 | 1596 | 0.556380 | TCCTCCTCCTCCTCCTCCTT | 60.556 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1032 | 1597 | 0.105709 | CCTCCTCCTCCTCCTCCTTC | 60.106 | 65.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1033 | 1598 | 0.933700 | CTCCTCCTCCTCCTCCTTCT | 59.066 | 60.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1198 | 1782 | 2.239439 | AGAGGTGACCCGGAGAGGA | 61.239 | 63.158 | 0.73 | 0.00 | 45.00 | 3.71 |
1230 | 1826 | 3.749064 | CCCAAGCAGCAGCAGCAG | 61.749 | 66.667 | 12.92 | 3.98 | 45.49 | 4.24 |
1239 | 1835 | 2.962569 | CAGCAGCAGCAGCAACAT | 59.037 | 55.556 | 12.92 | 0.00 | 45.49 | 2.71 |
1240 | 1836 | 1.154016 | CAGCAGCAGCAGCAACATC | 60.154 | 57.895 | 12.92 | 0.00 | 45.49 | 3.06 |
1241 | 1837 | 1.602605 | AGCAGCAGCAGCAACATCA | 60.603 | 52.632 | 12.92 | 0.00 | 45.49 | 3.07 |
1337 | 1933 | 1.820906 | GCGCCTGATTGCCTGATGA | 60.821 | 57.895 | 0.00 | 0.00 | 0.00 | 2.92 |
1393 | 1992 | 2.040947 | TGGATTGTGACATGGCTTGGTA | 59.959 | 45.455 | 0.00 | 0.00 | 0.00 | 3.25 |
1401 | 2000 | 0.808755 | CATGGCTTGGTACGGTTTCC | 59.191 | 55.000 | 0.00 | 0.00 | 0.00 | 3.13 |
1612 | 2217 | 0.612453 | TGGCATTGGATGAGCAGCAA | 60.612 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
1630 | 2235 | 5.122869 | GCAGCAACAGAGACAGATTAATTCA | 59.877 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1651 | 2256 | 1.213799 | GTGTTACCCGTCCTCGTCC | 59.786 | 63.158 | 0.00 | 0.00 | 35.01 | 4.79 |
1747 | 2352 | 2.969950 | CCGGGACCAGGTAATTCATCTA | 59.030 | 50.000 | 1.83 | 0.00 | 0.00 | 1.98 |
1775 | 2380 | 1.577328 | CCATGCCACGACAGTCCAAC | 61.577 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
1902 | 2507 | 2.594303 | CTGGTGGCGGCAGACAAA | 60.594 | 61.111 | 13.91 | 0.00 | 36.97 | 2.83 |
2148 | 2753 | 2.202623 | GCCGAATCGTGCTCGTCT | 60.203 | 61.111 | 8.17 | 0.00 | 38.33 | 4.18 |
2367 | 2972 | 4.154347 | CAGAGCTGTCCTCGGGGC | 62.154 | 72.222 | 0.00 | 0.00 | 45.54 | 5.80 |
2371 | 2976 | 4.554036 | GCTGTCCTCGGGGCCATC | 62.554 | 72.222 | 4.39 | 0.00 | 0.00 | 3.51 |
2372 | 2977 | 3.866582 | CTGTCCTCGGGGCCATCC | 61.867 | 72.222 | 4.39 | 0.00 | 0.00 | 3.51 |
2397 | 3006 | 4.082523 | CCATCCCGTGCCGTGAGT | 62.083 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
2436 | 3045 | 1.266989 | GGCGCCATAGCTTATTCCAAC | 59.733 | 52.381 | 24.80 | 0.00 | 36.60 | 3.77 |
2652 | 3273 | 5.103000 | CGTTCTTTCTCCGATCATTACTGT | 58.897 | 41.667 | 0.00 | 0.00 | 0.00 | 3.55 |
2654 | 3275 | 6.750501 | CGTTCTTTCTCCGATCATTACTGTTA | 59.249 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
2659 | 3280 | 9.239002 | CTTTCTCCGATCATTACTGTTAGTAAG | 57.761 | 37.037 | 7.41 | 1.46 | 43.17 | 2.34 |
2666 | 3287 | 5.175859 | TCATTACTGTTAGTAAGGCTGTGC | 58.824 | 41.667 | 8.13 | 0.00 | 43.17 | 4.57 |
2667 | 3288 | 4.884668 | TTACTGTTAGTAAGGCTGTGCT | 57.115 | 40.909 | 0.00 | 0.00 | 35.89 | 4.40 |
2668 | 3289 | 3.045601 | ACTGTTAGTAAGGCTGTGCTG | 57.954 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
2669 | 3290 | 2.368875 | ACTGTTAGTAAGGCTGTGCTGT | 59.631 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
2670 | 3291 | 2.738846 | CTGTTAGTAAGGCTGTGCTGTG | 59.261 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2671 | 3292 | 1.464997 | GTTAGTAAGGCTGTGCTGTGC | 59.535 | 52.381 | 0.00 | 0.00 | 0.00 | 4.57 |
2672 | 3293 | 0.976641 | TAGTAAGGCTGTGCTGTGCT | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2675 | 3296 | 0.684535 | TAAGGCTGTGCTGTGCTGTA | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2686 | 3307 | 3.509967 | TGCTGTGCTGTACTGTACTGTAT | 59.490 | 43.478 | 21.03 | 0.00 | 0.00 | 2.29 |
2712 | 3333 | 3.565482 | GGTTGCTTGTGATGTTCTCTTCA | 59.435 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
2741 | 3365 | 5.854866 | CGAAATGACGAATTAGCGGAGTATA | 59.145 | 40.000 | 0.00 | 0.00 | 35.12 | 1.47 |
2747 | 3371 | 5.759963 | ACGAATTAGCGGAGTATAAGACTG | 58.240 | 41.667 | 0.00 | 0.00 | 34.75 | 3.51 |
2756 | 3380 | 5.333513 | CGGAGTATAAGACTGGATAATCGC | 58.666 | 45.833 | 0.00 | 0.00 | 39.06 | 4.58 |
2785 | 3409 | 1.229428 | CAAGTGATCGCAACCACTGT | 58.771 | 50.000 | 9.33 | 0.00 | 42.25 | 3.55 |
2793 | 3417 | 2.912624 | GCAACCACTGTGCTGCTCC | 61.913 | 63.158 | 19.70 | 0.00 | 0.00 | 4.70 |
2794 | 3418 | 2.281070 | AACCACTGTGCTGCTCCG | 60.281 | 61.111 | 1.29 | 0.00 | 0.00 | 4.63 |
2795 | 3419 | 3.106986 | AACCACTGTGCTGCTCCGT | 62.107 | 57.895 | 1.29 | 0.00 | 0.00 | 4.69 |
2796 | 3420 | 1.754380 | AACCACTGTGCTGCTCCGTA | 61.754 | 55.000 | 1.29 | 0.00 | 0.00 | 4.02 |
2804 | 3433 | 2.808315 | CTGCTCCGTATGGCGTCT | 59.192 | 61.111 | 0.00 | 0.00 | 39.32 | 4.18 |
2813 | 3442 | 3.069016 | TCCGTATGGCGTCTATTTGATGT | 59.931 | 43.478 | 0.00 | 0.00 | 39.32 | 3.06 |
2916 | 3565 | 2.972505 | CGTCCTGTGCCGTGCTTT | 60.973 | 61.111 | 0.00 | 0.00 | 0.00 | 3.51 |
3010 | 3689 | 1.277557 | CAGGGTCTGAAGAAGAGTGGG | 59.722 | 57.143 | 0.00 | 0.00 | 34.84 | 4.61 |
3043 | 3727 | 4.827087 | ATGGCAGCGGCGTCAGAG | 62.827 | 66.667 | 9.37 | 0.00 | 42.47 | 3.35 |
3211 | 3899 | 2.330393 | GCGTAGTGATAGCCGCGA | 59.670 | 61.111 | 8.23 | 0.00 | 36.53 | 5.87 |
3216 | 3904 | 0.750546 | TAGTGATAGCCGCGAGTGGT | 60.751 | 55.000 | 8.23 | 0.00 | 0.00 | 4.16 |
3364 | 4061 | 0.243636 | CGCCCCTTTTACTTTGGCAG | 59.756 | 55.000 | 0.00 | 0.00 | 42.27 | 4.85 |
3387 | 4089 | 0.034896 | AGGAAAGCCATCGTCGTTGT | 59.965 | 50.000 | 2.82 | 0.00 | 36.29 | 3.32 |
3413 | 4115 | 1.264557 | CGGCGATCTTCACGTATCTCT | 59.735 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
3414 | 4116 | 2.663334 | CGGCGATCTTCACGTATCTCTC | 60.663 | 54.545 | 0.00 | 0.00 | 0.00 | 3.20 |
3415 | 4117 | 2.290916 | GGCGATCTTCACGTATCTCTCA | 59.709 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3430 | 4135 | 3.784338 | TCTCTCACGTTGTTTTACGGTT | 58.216 | 40.909 | 0.00 | 0.00 | 45.44 | 4.44 |
3461 | 4166 | 2.276201 | CGCTTTATGTCCCACGATTGA | 58.724 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
3462 | 4167 | 2.872245 | CGCTTTATGTCCCACGATTGAT | 59.128 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
3526 | 4245 | 1.145377 | ATAAATTCGCGCCCGGAGT | 59.855 | 52.632 | 0.73 | 0.00 | 34.56 | 3.85 |
3605 | 4329 | 4.298261 | TCGACACCGGTACCCCCA | 62.298 | 66.667 | 6.87 | 0.00 | 36.24 | 4.96 |
3629 | 4357 | 2.488820 | GACGAGTACCACTCCGGC | 59.511 | 66.667 | 0.00 | 0.00 | 42.12 | 6.13 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 5.817296 | TCGAATGTGAATATTAGCTTGCACT | 59.183 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1 | 2 | 6.048073 | TCGAATGTGAATATTAGCTTGCAC | 57.952 | 37.500 | 0.00 | 0.00 | 0.00 | 4.57 |
2 | 3 | 6.866010 | ATCGAATGTGAATATTAGCTTGCA | 57.134 | 33.333 | 0.00 | 0.00 | 0.00 | 4.08 |
3 | 4 | 9.831737 | AATAATCGAATGTGAATATTAGCTTGC | 57.168 | 29.630 | 0.00 | 0.00 | 0.00 | 4.01 |
52 | 53 | 6.587608 | CCTTCGAGCTGCAATTTAGAAAAATT | 59.412 | 34.615 | 1.02 | 0.00 | 44.35 | 1.82 |
53 | 54 | 6.071952 | TCCTTCGAGCTGCAATTTAGAAAAAT | 60.072 | 34.615 | 1.02 | 0.00 | 36.87 | 1.82 |
54 | 55 | 5.240623 | TCCTTCGAGCTGCAATTTAGAAAAA | 59.759 | 36.000 | 1.02 | 0.00 | 0.00 | 1.94 |
59 | 93 | 4.125703 | AGATCCTTCGAGCTGCAATTTAG | 58.874 | 43.478 | 1.02 | 0.00 | 32.16 | 1.85 |
62 | 96 | 2.706339 | AGATCCTTCGAGCTGCAATT | 57.294 | 45.000 | 1.02 | 0.00 | 32.16 | 2.32 |
72 | 106 | 4.440103 | CGTATCAACGGTTTAGATCCTTCG | 59.560 | 45.833 | 0.00 | 0.00 | 45.50 | 3.79 |
87 | 121 | 7.024340 | TCACAACCTCTATCTACGTATCAAC | 57.976 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
94 | 447 | 4.145807 | AGGGATCACAACCTCTATCTACG | 58.854 | 47.826 | 0.00 | 0.00 | 28.88 | 3.51 |
144 | 497 | 8.352942 | AGTGATGGTCAAAGTAAATCTCAAAAC | 58.647 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
161 | 514 | 2.487934 | AGCGCATATGAAGTGATGGTC | 58.512 | 47.619 | 11.47 | 0.00 | 0.00 | 4.02 |
172 | 525 | 6.795114 | CCGTATACCTTTTTAAAGCGCATATG | 59.205 | 38.462 | 11.47 | 0.00 | 34.69 | 1.78 |
181 | 576 | 7.330262 | AGAATCCGTCCGTATACCTTTTTAAA | 58.670 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
187 | 582 | 6.661304 | AATAAGAATCCGTCCGTATACCTT | 57.339 | 37.500 | 0.00 | 0.00 | 0.00 | 3.50 |
197 | 592 | 5.429130 | ACTCCCTTCAAATAAGAATCCGTC | 58.571 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
200 | 595 | 6.427441 | AGGAACTCCCTTCAAATAAGAATCC | 58.573 | 40.000 | 0.00 | 0.00 | 44.85 | 3.01 |
263 | 658 | 9.574458 | CGAGATTTATATTGACCACGATAAGAT | 57.426 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
264 | 659 | 8.789762 | TCGAGATTTATATTGACCACGATAAGA | 58.210 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
265 | 660 | 8.965986 | TCGAGATTTATATTGACCACGATAAG | 57.034 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
266 | 661 | 9.752961 | TTTCGAGATTTATATTGACCACGATAA | 57.247 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
267 | 662 | 9.752961 | TTTTCGAGATTTATATTGACCACGATA | 57.247 | 29.630 | 0.00 | 0.00 | 0.00 | 2.92 |
268 | 663 | 8.657074 | TTTTCGAGATTTATATTGACCACGAT | 57.343 | 30.769 | 0.00 | 0.00 | 0.00 | 3.73 |
269 | 664 | 8.657074 | ATTTTCGAGATTTATATTGACCACGA | 57.343 | 30.769 | 0.00 | 0.00 | 0.00 | 4.35 |
270 | 665 | 9.793245 | GTATTTTCGAGATTTATATTGACCACG | 57.207 | 33.333 | 0.00 | 0.00 | 0.00 | 4.94 |
271 | 666 | 9.793245 | CGTATTTTCGAGATTTATATTGACCAC | 57.207 | 33.333 | 0.00 | 0.00 | 0.00 | 4.16 |
272 | 667 | 8.492748 | GCGTATTTTCGAGATTTATATTGACCA | 58.507 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
273 | 668 | 8.492748 | TGCGTATTTTCGAGATTTATATTGACC | 58.507 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
274 | 669 | 9.858247 | TTGCGTATTTTCGAGATTTATATTGAC | 57.142 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
280 | 675 | 9.256477 | TGTCTATTGCGTATTTTCGAGATTTAT | 57.744 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
281 | 676 | 8.537223 | GTGTCTATTGCGTATTTTCGAGATTTA | 58.463 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
282 | 677 | 7.277981 | AGTGTCTATTGCGTATTTTCGAGATTT | 59.722 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
283 | 678 | 6.757010 | AGTGTCTATTGCGTATTTTCGAGATT | 59.243 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
284 | 679 | 6.273825 | AGTGTCTATTGCGTATTTTCGAGAT | 58.726 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
285 | 680 | 5.647589 | AGTGTCTATTGCGTATTTTCGAGA | 58.352 | 37.500 | 0.00 | 0.00 | 0.00 | 4.04 |
286 | 681 | 5.950965 | AGTGTCTATTGCGTATTTTCGAG | 57.049 | 39.130 | 0.00 | 0.00 | 0.00 | 4.04 |
287 | 682 | 6.324042 | TGTAGTGTCTATTGCGTATTTTCGA | 58.676 | 36.000 | 0.00 | 0.00 | 0.00 | 3.71 |
288 | 683 | 6.563398 | TGTAGTGTCTATTGCGTATTTTCG | 57.437 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
289 | 684 | 8.600625 | TGAATGTAGTGTCTATTGCGTATTTTC | 58.399 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
290 | 685 | 8.487313 | TGAATGTAGTGTCTATTGCGTATTTT | 57.513 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
291 | 686 | 8.551205 | CATGAATGTAGTGTCTATTGCGTATTT | 58.449 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
292 | 687 | 7.171508 | CCATGAATGTAGTGTCTATTGCGTATT | 59.828 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
293 | 688 | 6.646653 | CCATGAATGTAGTGTCTATTGCGTAT | 59.353 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
294 | 689 | 5.983118 | CCATGAATGTAGTGTCTATTGCGTA | 59.017 | 40.000 | 0.00 | 0.00 | 0.00 | 4.42 |
295 | 690 | 4.811024 | CCATGAATGTAGTGTCTATTGCGT | 59.189 | 41.667 | 0.00 | 0.00 | 0.00 | 5.24 |
296 | 691 | 5.049828 | TCCATGAATGTAGTGTCTATTGCG | 58.950 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
297 | 692 | 8.090831 | TCTATCCATGAATGTAGTGTCTATTGC | 58.909 | 37.037 | 0.00 | 0.00 | 0.00 | 3.56 |
298 | 693 | 9.636879 | CTCTATCCATGAATGTAGTGTCTATTG | 57.363 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
299 | 694 | 9.373450 | ACTCTATCCATGAATGTAGTGTCTATT | 57.627 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
300 | 695 | 8.801299 | CACTCTATCCATGAATGTAGTGTCTAT | 58.199 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
301 | 696 | 7.998964 | TCACTCTATCCATGAATGTAGTGTCTA | 59.001 | 37.037 | 13.53 | 0.00 | 35.68 | 2.59 |
302 | 697 | 6.836007 | TCACTCTATCCATGAATGTAGTGTCT | 59.164 | 38.462 | 13.53 | 0.00 | 35.68 | 3.41 |
303 | 698 | 7.043961 | TCACTCTATCCATGAATGTAGTGTC | 57.956 | 40.000 | 13.53 | 0.00 | 35.68 | 3.67 |
304 | 699 | 6.609212 | ACTCACTCTATCCATGAATGTAGTGT | 59.391 | 38.462 | 13.53 | 6.50 | 35.68 | 3.55 |
305 | 700 | 7.048629 | ACTCACTCTATCCATGAATGTAGTG | 57.951 | 40.000 | 0.00 | 2.80 | 35.54 | 2.74 |
306 | 701 | 8.768501 | TTACTCACTCTATCCATGAATGTAGT | 57.231 | 34.615 | 0.00 | 0.00 | 0.00 | 2.73 |
307 | 702 | 9.853555 | GATTACTCACTCTATCCATGAATGTAG | 57.146 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
308 | 703 | 9.593565 | AGATTACTCACTCTATCCATGAATGTA | 57.406 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
309 | 704 | 8.489676 | AGATTACTCACTCTATCCATGAATGT | 57.510 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
310 | 705 | 9.775854 | AAAGATTACTCACTCTATCCATGAATG | 57.224 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
312 | 707 | 9.605275 | CAAAAGATTACTCACTCTATCCATGAA | 57.395 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
313 | 708 | 8.981659 | TCAAAAGATTACTCACTCTATCCATGA | 58.018 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
314 | 709 | 9.775854 | ATCAAAAGATTACTCACTCTATCCATG | 57.224 | 33.333 | 0.00 | 0.00 | 0.00 | 3.66 |
321 | 716 | 9.220767 | GGTGTTTATCAAAAGATTACTCACTCT | 57.779 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
322 | 717 | 9.220767 | AGGTGTTTATCAAAAGATTACTCACTC | 57.779 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
327 | 722 | 9.668497 | GGAGTAGGTGTTTATCAAAAGATTACT | 57.332 | 33.333 | 0.00 | 0.00 | 30.61 | 2.24 |
328 | 723 | 8.890718 | GGGAGTAGGTGTTTATCAAAAGATTAC | 58.109 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
329 | 724 | 8.832735 | AGGGAGTAGGTGTTTATCAAAAGATTA | 58.167 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
330 | 725 | 7.699878 | AGGGAGTAGGTGTTTATCAAAAGATT | 58.300 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
331 | 726 | 7.272144 | AGGGAGTAGGTGTTTATCAAAAGAT | 57.728 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
332 | 727 | 6.296259 | GGAGGGAGTAGGTGTTTATCAAAAGA | 60.296 | 42.308 | 0.00 | 0.00 | 0.00 | 2.52 |
333 | 728 | 5.880887 | GGAGGGAGTAGGTGTTTATCAAAAG | 59.119 | 44.000 | 0.00 | 0.00 | 0.00 | 2.27 |
334 | 729 | 5.570034 | CGGAGGGAGTAGGTGTTTATCAAAA | 60.570 | 44.000 | 0.00 | 0.00 | 0.00 | 2.44 |
335 | 730 | 4.081309 | CGGAGGGAGTAGGTGTTTATCAAA | 60.081 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
336 | 731 | 3.449737 | CGGAGGGAGTAGGTGTTTATCAA | 59.550 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
337 | 732 | 3.028850 | CGGAGGGAGTAGGTGTTTATCA | 58.971 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
338 | 733 | 3.029570 | ACGGAGGGAGTAGGTGTTTATC | 58.970 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
339 | 734 | 3.111741 | ACGGAGGGAGTAGGTGTTTAT | 57.888 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
340 | 735 | 2.610438 | ACGGAGGGAGTAGGTGTTTA | 57.390 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
341 | 736 | 1.622312 | GAACGGAGGGAGTAGGTGTTT | 59.378 | 52.381 | 0.00 | 0.00 | 0.00 | 2.83 |
347 | 742 | 1.400737 | ATTCCGAACGGAGGGAGTAG | 58.599 | 55.000 | 15.34 | 0.00 | 46.06 | 2.57 |
360 | 755 | 3.306917 | TTCTGCGACAACTAATTCCGA | 57.693 | 42.857 | 0.00 | 0.00 | 0.00 | 4.55 |
362 | 757 | 4.394920 | TCCATTTCTGCGACAACTAATTCC | 59.605 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
363 | 758 | 5.545658 | TCCATTTCTGCGACAACTAATTC | 57.454 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
369 | 764 | 4.572389 | AGATACATCCATTTCTGCGACAAC | 59.428 | 41.667 | 0.00 | 0.00 | 0.00 | 3.32 |
371 | 766 | 4.406648 | AGATACATCCATTTCTGCGACA | 57.593 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
405 | 800 | 8.455682 | TGTCTCGGAAATGGATGTATTTAAAAC | 58.544 | 33.333 | 0.00 | 0.00 | 30.78 | 2.43 |
406 | 801 | 8.568676 | TGTCTCGGAAATGGATGTATTTAAAA | 57.431 | 30.769 | 0.00 | 0.00 | 30.78 | 1.52 |
408 | 803 | 7.827236 | ACTTGTCTCGGAAATGGATGTATTTAA | 59.173 | 33.333 | 0.00 | 0.00 | 30.78 | 1.52 |
411 | 806 | 5.745227 | ACTTGTCTCGGAAATGGATGTATT | 58.255 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
415 | 810 | 6.510157 | CGAATTACTTGTCTCGGAAATGGATG | 60.510 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
425 | 820 | 2.597305 | CCGTTCCGAATTACTTGTCTCG | 59.403 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
427 | 822 | 3.368116 | CCTCCGTTCCGAATTACTTGTCT | 60.368 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
455 | 850 | 5.293560 | TGCTTTGGCTTTGGTATTTGTTAC | 58.706 | 37.500 | 0.00 | 0.00 | 39.59 | 2.50 |
470 | 961 | 1.448985 | TTACTCGTCCATGCTTTGGC | 58.551 | 50.000 | 1.73 | 0.00 | 46.01 | 4.52 |
497 | 988 | 5.841810 | TCGCATCCAATCTTTCAAAAGTTT | 58.158 | 33.333 | 2.63 | 0.00 | 37.31 | 2.66 |
498 | 989 | 5.452078 | TCGCATCCAATCTTTCAAAAGTT | 57.548 | 34.783 | 2.63 | 0.00 | 37.31 | 2.66 |
499 | 990 | 5.452078 | TTCGCATCCAATCTTTCAAAAGT | 57.548 | 34.783 | 2.63 | 0.00 | 37.31 | 2.66 |
500 | 991 | 4.325472 | GCTTCGCATCCAATCTTTCAAAAG | 59.675 | 41.667 | 0.00 | 0.00 | 37.36 | 2.27 |
501 | 992 | 4.022068 | AGCTTCGCATCCAATCTTTCAAAA | 60.022 | 37.500 | 0.00 | 0.00 | 0.00 | 2.44 |
504 | 995 | 2.715046 | AGCTTCGCATCCAATCTTTCA | 58.285 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
641 | 1162 | 2.542020 | TTCTTGACGTCAATGCAGGA | 57.458 | 45.000 | 29.79 | 20.10 | 35.02 | 3.86 |
682 | 1204 | 3.098377 | GGGCGGTTAAAATTAGGGGAAA | 58.902 | 45.455 | 0.00 | 0.00 | 0.00 | 3.13 |
794 | 1334 | 2.747686 | GGAAGGGAACAGGACGCA | 59.252 | 61.111 | 0.00 | 0.00 | 0.00 | 5.24 |
801 | 1351 | 0.768622 | ACATGGAACGGAAGGGAACA | 59.231 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
803 | 1353 | 1.003118 | CTCACATGGAACGGAAGGGAA | 59.997 | 52.381 | 0.00 | 0.00 | 0.00 | 3.97 |
804 | 1354 | 0.613260 | CTCACATGGAACGGAAGGGA | 59.387 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
805 | 1355 | 0.613260 | TCTCACATGGAACGGAAGGG | 59.387 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
806 | 1356 | 1.406069 | CCTCTCACATGGAACGGAAGG | 60.406 | 57.143 | 0.00 | 0.00 | 0.00 | 3.46 |
807 | 1357 | 1.276421 | ACCTCTCACATGGAACGGAAG | 59.724 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
846 | 1403 | 4.114997 | CAATTCCGCGCACCCACC | 62.115 | 66.667 | 8.75 | 0.00 | 0.00 | 4.61 |
898 | 1455 | 4.200283 | CGTCCTCCTCCTCAGCGC | 62.200 | 72.222 | 0.00 | 0.00 | 0.00 | 5.92 |
903 | 1460 | 2.503382 | GGGCATCGTCCTCCTCCTC | 61.503 | 68.421 | 0.00 | 0.00 | 0.00 | 3.71 |
911 | 1468 | 1.343069 | ATAGAAGGAGGGCATCGTCC | 58.657 | 55.000 | 0.00 | 0.00 | 45.60 | 4.79 |
912 | 1469 | 4.602340 | TTAATAGAAGGAGGGCATCGTC | 57.398 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
913 | 1470 | 5.123936 | GTTTTAATAGAAGGAGGGCATCGT | 58.876 | 41.667 | 0.00 | 0.00 | 0.00 | 3.73 |
914 | 1471 | 4.515567 | GGTTTTAATAGAAGGAGGGCATCG | 59.484 | 45.833 | 0.00 | 0.00 | 0.00 | 3.84 |
915 | 1472 | 5.299531 | GTGGTTTTAATAGAAGGAGGGCATC | 59.700 | 44.000 | 0.00 | 0.00 | 0.00 | 3.91 |
916 | 1473 | 5.201243 | GTGGTTTTAATAGAAGGAGGGCAT | 58.799 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
917 | 1474 | 4.595986 | GTGGTTTTAATAGAAGGAGGGCA | 58.404 | 43.478 | 0.00 | 0.00 | 0.00 | 5.36 |
918 | 1475 | 3.626217 | CGTGGTTTTAATAGAAGGAGGGC | 59.374 | 47.826 | 0.00 | 0.00 | 0.00 | 5.19 |
919 | 1476 | 5.093849 | TCGTGGTTTTAATAGAAGGAGGG | 57.906 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
920 | 1477 | 5.581085 | CACTCGTGGTTTTAATAGAAGGAGG | 59.419 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
921 | 1478 | 5.581085 | CCACTCGTGGTTTTAATAGAAGGAG | 59.419 | 44.000 | 7.93 | 0.00 | 45.53 | 3.69 |
922 | 1479 | 5.484715 | CCACTCGTGGTTTTAATAGAAGGA | 58.515 | 41.667 | 7.93 | 0.00 | 45.53 | 3.36 |
923 | 1480 | 5.796350 | CCACTCGTGGTTTTAATAGAAGG | 57.204 | 43.478 | 7.93 | 0.00 | 45.53 | 3.46 |
1005 | 1562 | 2.384828 | GAGGAGGAGGAGGAGAAGAAC | 58.615 | 57.143 | 0.00 | 0.00 | 0.00 | 3.01 |
1006 | 1563 | 1.289530 | GGAGGAGGAGGAGGAGAAGAA | 59.710 | 57.143 | 0.00 | 0.00 | 0.00 | 2.52 |
1009 | 1566 | 0.930726 | GAGGAGGAGGAGGAGGAGAA | 59.069 | 60.000 | 0.00 | 0.00 | 0.00 | 2.87 |
1015 | 1572 | 1.398799 | AAGAAGGAGGAGGAGGAGGA | 58.601 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1025 | 1590 | 5.888161 | AGCCATTGTTATGTTAAGAAGGAGG | 59.112 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1026 | 1591 | 6.375455 | ACAGCCATTGTTATGTTAAGAAGGAG | 59.625 | 38.462 | 0.00 | 0.00 | 36.31 | 3.69 |
1027 | 1592 | 6.150976 | CACAGCCATTGTTATGTTAAGAAGGA | 59.849 | 38.462 | 0.00 | 0.00 | 38.16 | 3.36 |
1028 | 1593 | 6.324819 | CACAGCCATTGTTATGTTAAGAAGG | 58.675 | 40.000 | 0.00 | 0.00 | 38.16 | 3.46 |
1029 | 1594 | 5.801947 | GCACAGCCATTGTTATGTTAAGAAG | 59.198 | 40.000 | 0.00 | 0.00 | 38.16 | 2.85 |
1030 | 1595 | 5.242615 | TGCACAGCCATTGTTATGTTAAGAA | 59.757 | 36.000 | 0.00 | 0.00 | 38.16 | 2.52 |
1031 | 1596 | 4.764308 | TGCACAGCCATTGTTATGTTAAGA | 59.236 | 37.500 | 0.00 | 0.00 | 38.16 | 2.10 |
1032 | 1597 | 5.058149 | TGCACAGCCATTGTTATGTTAAG | 57.942 | 39.130 | 0.00 | 0.00 | 38.16 | 1.85 |
1033 | 1598 | 4.082300 | CCTGCACAGCCATTGTTATGTTAA | 60.082 | 41.667 | 0.00 | 0.00 | 38.16 | 2.01 |
1198 | 1782 | 3.083997 | GGGCAGGTCCATCTCCGT | 61.084 | 66.667 | 0.00 | 0.00 | 36.21 | 4.69 |
1203 | 1787 | 2.356278 | TGCTTGGGCAGGTCCATC | 59.644 | 61.111 | 0.00 | 0.00 | 44.28 | 3.51 |
1231 | 1827 | 0.100682 | GGATGCTGCTGATGTTGCTG | 59.899 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
1232 | 1828 | 1.374343 | CGGATGCTGCTGATGTTGCT | 61.374 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
1233 | 1829 | 1.063649 | CGGATGCTGCTGATGTTGC | 59.936 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
1234 | 1830 | 1.063649 | GCGGATGCTGCTGATGTTG | 59.936 | 57.895 | 0.00 | 0.00 | 38.39 | 3.33 |
1235 | 1831 | 1.374343 | CTGCGGATGCTGCTGATGTT | 61.374 | 55.000 | 0.00 | 0.00 | 43.34 | 2.71 |
1236 | 1832 | 1.818363 | CTGCGGATGCTGCTGATGT | 60.818 | 57.895 | 0.00 | 0.00 | 43.34 | 3.06 |
1237 | 1833 | 3.023118 | CTGCGGATGCTGCTGATG | 58.977 | 61.111 | 0.00 | 0.00 | 43.34 | 3.07 |
1372 | 1971 | 1.203038 | ACCAAGCCATGTCACAATCCA | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1393 | 1992 | 2.281761 | CTGGCTGCAGGAAACCGT | 60.282 | 61.111 | 17.12 | 0.00 | 0.00 | 4.83 |
1401 | 2000 | 2.110967 | CGATTCCCACTGGCTGCAG | 61.111 | 63.158 | 10.11 | 10.11 | 0.00 | 4.41 |
1612 | 2217 | 8.627208 | AACACAATGAATTAATCTGTCTCTGT | 57.373 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
1630 | 2235 | 0.971386 | ACGAGGACGGGTAACACAAT | 59.029 | 50.000 | 0.00 | 0.00 | 44.46 | 2.71 |
1896 | 2501 | 2.509336 | CGCGAGGCCGATTTGTCT | 60.509 | 61.111 | 0.00 | 0.00 | 38.22 | 3.41 |
2025 | 2630 | 3.386237 | GTGGCCTGCTCCGAGAGT | 61.386 | 66.667 | 3.32 | 0.00 | 31.39 | 3.24 |
2148 | 2753 | 2.753966 | GCGAGGGTCTACGTACGCA | 61.754 | 63.158 | 16.72 | 0.23 | 44.29 | 5.24 |
2367 | 2972 | 2.421739 | GATGGACGACCGGGATGG | 59.578 | 66.667 | 6.32 | 0.00 | 46.41 | 3.51 |
2368 | 2973 | 2.421739 | GGATGGACGACCGGGATG | 59.578 | 66.667 | 6.32 | 0.00 | 39.42 | 3.51 |
2369 | 2974 | 2.842936 | GGGATGGACGACCGGGAT | 60.843 | 66.667 | 6.32 | 0.00 | 39.42 | 3.85 |
2374 | 2979 | 4.832608 | GGCACGGGATGGACGACC | 62.833 | 72.222 | 0.00 | 0.00 | 34.93 | 4.79 |
2412 | 3021 | 2.623416 | GGAATAAGCTATGGCGCCTTTT | 59.377 | 45.455 | 29.70 | 14.99 | 44.37 | 2.27 |
2436 | 3045 | 8.345565 | CCATTTTAGGACTATTTTCTCCATTCG | 58.654 | 37.037 | 0.00 | 0.00 | 0.00 | 3.34 |
2652 | 3273 | 1.347707 | AGCACAGCACAGCCTTACTAA | 59.652 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
2654 | 3275 | 0.604780 | CAGCACAGCACAGCCTTACT | 60.605 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2659 | 3280 | 1.302033 | AGTACAGCACAGCACAGCC | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 4.85 |
2666 | 3287 | 5.310720 | TCATACAGTACAGTACAGCACAG | 57.689 | 43.478 | 13.37 | 0.00 | 0.00 | 3.66 |
2667 | 3288 | 4.157840 | CCTCATACAGTACAGTACAGCACA | 59.842 | 45.833 | 13.37 | 0.00 | 0.00 | 4.57 |
2668 | 3289 | 4.440250 | CCCTCATACAGTACAGTACAGCAC | 60.440 | 50.000 | 13.37 | 0.00 | 0.00 | 4.40 |
2669 | 3290 | 3.699538 | CCCTCATACAGTACAGTACAGCA | 59.300 | 47.826 | 13.37 | 0.00 | 0.00 | 4.41 |
2670 | 3291 | 3.700038 | ACCCTCATACAGTACAGTACAGC | 59.300 | 47.826 | 13.37 | 0.00 | 0.00 | 4.40 |
2671 | 3292 | 5.651530 | CAACCCTCATACAGTACAGTACAG | 58.348 | 45.833 | 13.37 | 7.52 | 0.00 | 2.74 |
2672 | 3293 | 4.081862 | GCAACCCTCATACAGTACAGTACA | 60.082 | 45.833 | 13.37 | 0.00 | 0.00 | 2.90 |
2675 | 3296 | 3.173965 | AGCAACCCTCATACAGTACAGT | 58.826 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
2686 | 3307 | 2.158623 | AGAACATCACAAGCAACCCTCA | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2712 | 3333 | 4.399978 | CGCTAATTCGTCATTTCGGTTTT | 58.600 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
2741 | 3365 | 3.627395 | TTGGTGCGATTATCCAGTCTT | 57.373 | 42.857 | 0.00 | 0.00 | 32.63 | 3.01 |
2747 | 3371 | 2.475200 | GCAGTTTGGTGCGATTATCC | 57.525 | 50.000 | 0.00 | 0.00 | 32.74 | 2.59 |
2756 | 3380 | 1.664016 | GCGATCACTTGCAGTTTGGTG | 60.664 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
2794 | 3418 | 4.449068 | CCTCACATCAAATAGACGCCATAC | 59.551 | 45.833 | 0.00 | 0.00 | 0.00 | 2.39 |
2795 | 3419 | 4.631131 | CCTCACATCAAATAGACGCCATA | 58.369 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
2796 | 3420 | 3.470709 | CCTCACATCAAATAGACGCCAT | 58.529 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
2804 | 3433 | 1.378531 | GCCACGCCTCACATCAAATA | 58.621 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2886 | 3515 | 2.508663 | GGACGCGCACTCCTAACC | 60.509 | 66.667 | 5.73 | 0.00 | 0.00 | 2.85 |
2888 | 3517 | 2.273179 | ACAGGACGCGCACTCCTAA | 61.273 | 57.895 | 20.45 | 0.00 | 35.83 | 2.69 |
2889 | 3518 | 2.675423 | ACAGGACGCGCACTCCTA | 60.675 | 61.111 | 20.45 | 0.00 | 35.83 | 2.94 |
2916 | 3565 | 2.980562 | CCGAAACGGCCGAATCATA | 58.019 | 52.632 | 35.90 | 0.00 | 41.17 | 2.15 |
2997 | 3676 | 0.473694 | TGCCTCCCCACTCTTCTTCA | 60.474 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3026 | 3705 | 4.827087 | CTCTGACGCCGCTGCCAT | 62.827 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
3211 | 3899 | 4.599500 | ACAGGAGGGCCCACCACT | 62.599 | 66.667 | 36.40 | 19.94 | 43.89 | 4.00 |
3276 | 3964 | 2.290745 | GGGGGTAGGAGGCTGGAT | 59.709 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
3334 | 4028 | 1.777941 | AAAGGGGCGGTAAACAAACA | 58.222 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
3364 | 4061 | 1.804748 | ACGACGATGGCTTTCCTTTTC | 59.195 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
3387 | 4089 | 0.031585 | CGTGAAGATCGCCGGGATAA | 59.968 | 55.000 | 2.18 | 0.00 | 34.82 | 1.75 |
3413 | 4115 | 3.311048 | GGGTTAACCGTAAAACAACGTGA | 59.689 | 43.478 | 18.39 | 0.00 | 41.27 | 4.35 |
3414 | 4116 | 3.547813 | GGGGTTAACCGTAAAACAACGTG | 60.548 | 47.826 | 18.39 | 0.00 | 41.27 | 4.49 |
3415 | 4117 | 2.616376 | GGGGTTAACCGTAAAACAACGT | 59.384 | 45.455 | 18.39 | 0.00 | 41.27 | 3.99 |
3430 | 4135 | 2.376987 | ATAAAGCGGGCGGGGGTTA | 61.377 | 57.895 | 0.00 | 0.00 | 0.00 | 2.85 |
3461 | 4166 | 0.171903 | GCATCAGCTTTGTTCGCCAT | 59.828 | 50.000 | 0.00 | 0.00 | 37.91 | 4.40 |
3462 | 4167 | 1.580942 | GCATCAGCTTTGTTCGCCA | 59.419 | 52.632 | 0.00 | 0.00 | 37.91 | 5.69 |
3493 | 4212 | 3.845781 | ATTTATGTCATGACGCTCCCT | 57.154 | 42.857 | 20.54 | 1.44 | 0.00 | 4.20 |
3495 | 4214 | 3.604772 | GCGAATTTATGTCATGACGCTCC | 60.605 | 47.826 | 20.54 | 5.53 | 41.25 | 4.70 |
3497 | 4216 | 2.033747 | CGCGAATTTATGTCATGACGCT | 60.034 | 45.455 | 20.54 | 12.87 | 42.06 | 5.07 |
3501 | 4220 | 1.601903 | GGGCGCGAATTTATGTCATGA | 59.398 | 47.619 | 12.10 | 0.00 | 0.00 | 3.07 |
3503 | 4222 | 0.586319 | CGGGCGCGAATTTATGTCAT | 59.414 | 50.000 | 19.65 | 0.00 | 0.00 | 3.06 |
3526 | 4245 | 2.826337 | CCGATCAGGGATCCACTCA | 58.174 | 57.895 | 15.23 | 0.00 | 35.83 | 3.41 |
3605 | 4329 | 2.617532 | GGAGTGGTACTCGTCCTGTACT | 60.618 | 54.545 | 3.17 | 0.00 | 45.96 | 2.73 |
3614 | 4338 | 3.834799 | GGGCCGGAGTGGTACTCG | 61.835 | 72.222 | 5.05 | 0.00 | 45.96 | 4.18 |
3629 | 4357 | 2.246739 | TACGTACTCGATCGCCGGG | 61.247 | 63.158 | 11.09 | 3.07 | 46.23 | 5.73 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.