Multiple sequence alignment - TraesCS6B01G288800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G288800 chr6B 100.000 4169 0 0 1 4169 519853998 519849830 0.000000e+00 7699
1 TraesCS6B01G288800 chr6B 89.222 167 18 0 1 167 228524139 228524305 4.220000e-50 209
2 TraesCS6B01G288800 chr6D 96.509 2320 61 11 1563 3878 344308921 344306618 0.000000e+00 3818
3 TraesCS6B01G288800 chr6D 89.533 621 43 18 169 777 456742742 456742132 0.000000e+00 767
4 TraesCS6B01G288800 chr6D 87.618 638 50 11 906 1533 344309538 344308920 0.000000e+00 713
5 TraesCS6B01G288800 chr6A 95.650 2322 76 17 1563 3878 484856333 484854031 0.000000e+00 3705
6 TraesCS6B01G288800 chr6A 88.253 647 49 9 906 1533 484856970 484856332 0.000000e+00 749
7 TraesCS6B01G288800 chr5B 89.054 740 59 15 169 901 352299243 352299967 0.000000e+00 898
8 TraesCS6B01G288800 chr5B 90.033 301 22 2 3877 4169 249554967 249554667 2.350000e-102 383
9 TraesCS6B01G288800 chr5B 82.310 277 37 9 3882 4148 50947687 50947413 3.240000e-56 230
10 TraesCS6B01G288800 chr5B 88.757 169 19 0 1 169 368608669 368608501 1.520000e-49 207
11 TraesCS6B01G288800 chr5B 87.719 171 19 1 1 169 110075962 110076132 9.140000e-47 198
12 TraesCS6B01G288800 chr7B 88.636 748 61 17 169 905 683463699 683464433 0.000000e+00 889
13 TraesCS6B01G288800 chr7B 91.097 629 35 13 169 783 591330344 591330965 0.000000e+00 832
14 TraesCS6B01G288800 chr7B 89.349 169 18 0 1 169 80044270 80044102 3.260000e-51 213
15 TraesCS6B01G288800 chr7B 88.166 169 20 0 1 169 430045951 430046119 7.070000e-48 202
16 TraesCS6B01G288800 chr2B 89.563 709 63 9 169 872 626958714 626958012 0.000000e+00 889
17 TraesCS6B01G288800 chr2B 79.040 396 78 5 2018 2410 674028030 674028423 2.470000e-67 267
18 TraesCS6B01G288800 chr7A 88.181 753 64 19 169 908 650461858 650461118 0.000000e+00 874
19 TraesCS6B01G288800 chr7A 89.147 258 19 3 3921 4169 692949286 692949029 3.130000e-81 313
20 TraesCS6B01G288800 chr5A 86.737 754 78 18 169 905 568205539 568206287 0.000000e+00 819
21 TraesCS6B01G288800 chr1B 87.032 748 69 22 168 900 350413648 350412914 0.000000e+00 819
22 TraesCS6B01G288800 chr1B 88.816 304 21 6 3877 4169 249631508 249631207 1.100000e-95 361
23 TraesCS6B01G288800 chr1B 91.373 255 13 3 3922 4169 497330621 497330369 1.440000e-89 340
24 TraesCS6B01G288800 chr1B 85.124 242 13 5 3937 4169 8951787 8952014 4.190000e-55 226
25 TraesCS6B01G288800 chr1B 87.574 169 21 0 1 169 422107221 422107053 3.290000e-46 196
26 TraesCS6B01G288800 chr4A 86.340 754 74 24 169 905 680581746 680581005 0.000000e+00 795
27 TraesCS6B01G288800 chr1A 91.030 301 19 2 3877 4169 34195163 34194863 2.330000e-107 399
28 TraesCS6B01G288800 chr1A 80.000 295 43 10 3878 4163 532378314 532378027 1.960000e-48 204
29 TraesCS6B01G288800 chr4B 92.248 258 11 3 3874 4123 427297633 427297889 1.430000e-94 357
30 TraesCS6B01G288800 chr5D 87.857 280 26 5 3893 4169 254330344 254330618 5.200000e-84 322
31 TraesCS6B01G288800 chr2D 86.622 299 31 3 3875 4165 139024270 139023973 5.200000e-84 322
32 TraesCS6B01G288800 chr1D 81.017 295 40 11 3875 4166 84874296 84874015 1.950000e-53 220
33 TraesCS6B01G288800 chr3B 88.095 168 20 0 2 169 176655969 176656136 2.540000e-47 200
34 TraesCS6B01G288800 chr3B 88.485 165 19 0 1 165 502826036 502825872 2.540000e-47 200
35 TraesCS6B01G288800 chr3B 87.574 169 21 0 1 169 81853507 81853675 3.290000e-46 196
36 TraesCS6B01G288800 chrUn 78.414 227 48 1 680 905 295439213 295438987 3.360000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G288800 chr6B 519849830 519853998 4168 True 7699.0 7699 100.0000 1 4169 1 chr6B.!!$R1 4168
1 TraesCS6B01G288800 chr6D 344306618 344309538 2920 True 2265.5 3818 92.0635 906 3878 2 chr6D.!!$R2 2972
2 TraesCS6B01G288800 chr6D 456742132 456742742 610 True 767.0 767 89.5330 169 777 1 chr6D.!!$R1 608
3 TraesCS6B01G288800 chr6A 484854031 484856970 2939 True 2227.0 3705 91.9515 906 3878 2 chr6A.!!$R1 2972
4 TraesCS6B01G288800 chr5B 352299243 352299967 724 False 898.0 898 89.0540 169 901 1 chr5B.!!$F2 732
5 TraesCS6B01G288800 chr7B 683463699 683464433 734 False 889.0 889 88.6360 169 905 1 chr7B.!!$F3 736
6 TraesCS6B01G288800 chr7B 591330344 591330965 621 False 832.0 832 91.0970 169 783 1 chr7B.!!$F2 614
7 TraesCS6B01G288800 chr2B 626958012 626958714 702 True 889.0 889 89.5630 169 872 1 chr2B.!!$R1 703
8 TraesCS6B01G288800 chr7A 650461118 650461858 740 True 874.0 874 88.1810 169 908 1 chr7A.!!$R1 739
9 TraesCS6B01G288800 chr5A 568205539 568206287 748 False 819.0 819 86.7370 169 905 1 chr5A.!!$F1 736
10 TraesCS6B01G288800 chr1B 350412914 350413648 734 True 819.0 819 87.0320 168 900 1 chr1B.!!$R2 732
11 TraesCS6B01G288800 chr4A 680581005 680581746 741 True 795.0 795 86.3400 169 905 1 chr4A.!!$R1 736

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
149 150 0.181350 CAGGCAAGTCTGGATACCCC 59.819 60.0 0.0 0.0 0.0 4.95 F
586 597 0.188342 ATGAGAGAGGGAGAGAGGGC 59.812 60.0 0.0 0.0 0.0 5.19 F
1362 1410 0.034059 CGTTGAGGTTGCCAGTCTCT 59.966 55.0 0.0 0.0 0.0 3.10 F
2760 2818 0.103208 CACGACTGAGATACCCTGGC 59.897 60.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1233 1281 0.034337 GGACCACAACCGTAGCAAGA 59.966 55.0 0.00 0.00 0.00 3.02 R
1431 1479 0.396811 GGCCCGGATAACAGTATGCT 59.603 55.0 0.73 0.00 42.53 3.79 R
3001 3059 0.959553 CATGAGAATGCCCCAGATGC 59.040 55.0 0.00 0.00 0.00 3.91 R
3956 4022 0.032815 GCTGGGAACTAGATCGCTCC 59.967 60.0 16.33 3.29 33.72 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.941081 CGGGAGCTAGCTTGAGGA 58.059 61.111 20.42 0.00 0.00 3.71
18 19 1.739049 CGGGAGCTAGCTTGAGGAG 59.261 63.158 20.42 4.07 0.00 3.69
19 20 1.743321 CGGGAGCTAGCTTGAGGAGG 61.743 65.000 20.42 0.76 0.00 4.30
20 21 1.445518 GGAGCTAGCTTGAGGAGGC 59.554 63.158 20.42 2.72 0.00 4.70
21 22 1.445518 GAGCTAGCTTGAGGAGGCC 59.554 63.158 20.42 0.00 0.00 5.19
22 23 2.107953 GCTAGCTTGAGGAGGCCG 59.892 66.667 7.70 0.00 0.00 6.13
23 24 2.427245 GCTAGCTTGAGGAGGCCGA 61.427 63.158 7.70 0.00 0.00 5.54
24 25 1.753368 GCTAGCTTGAGGAGGCCGAT 61.753 60.000 7.70 0.00 0.00 4.18
25 26 0.316841 CTAGCTTGAGGAGGCCGATC 59.683 60.000 0.00 0.00 0.00 3.69
26 27 1.115930 TAGCTTGAGGAGGCCGATCC 61.116 60.000 2.68 2.68 39.89 3.36
27 28 2.825264 CTTGAGGAGGCCGATCCC 59.175 66.667 7.41 3.10 40.53 3.85
28 29 2.768344 TTGAGGAGGCCGATCCCC 60.768 66.667 7.41 0.00 40.53 4.81
29 30 3.332393 TTGAGGAGGCCGATCCCCT 62.332 63.158 7.41 5.50 40.53 4.79
30 31 2.920384 GAGGAGGCCGATCCCCTC 60.920 72.222 15.51 15.51 46.54 4.30
44 45 3.411517 CCTCGGGGGTCTTGGCAT 61.412 66.667 0.00 0.00 0.00 4.40
45 46 2.677228 CTCGGGGGTCTTGGCATT 59.323 61.111 0.00 0.00 0.00 3.56
46 47 1.750399 CTCGGGGGTCTTGGCATTG 60.750 63.158 0.00 0.00 0.00 2.82
47 48 2.035626 CGGGGGTCTTGGCATTGT 59.964 61.111 0.00 0.00 0.00 2.71
48 49 1.606313 CGGGGGTCTTGGCATTGTT 60.606 57.895 0.00 0.00 0.00 2.83
49 50 1.595093 CGGGGGTCTTGGCATTGTTC 61.595 60.000 0.00 0.00 0.00 3.18
50 51 1.595093 GGGGGTCTTGGCATTGTTCG 61.595 60.000 0.00 0.00 0.00 3.95
51 52 1.212751 GGGTCTTGGCATTGTTCGC 59.787 57.895 0.00 0.00 0.00 4.70
68 69 2.970639 CCTCGCGAGGGTCTTGAA 59.029 61.111 41.47 1.44 44.87 2.69
69 70 1.446272 CCTCGCGAGGGTCTTGAAC 60.446 63.158 41.47 0.00 44.87 3.18
70 71 1.587054 CTCGCGAGGGTCTTGAACT 59.413 57.895 28.40 0.00 0.00 3.01
71 72 0.734253 CTCGCGAGGGTCTTGAACTG 60.734 60.000 28.40 0.00 0.00 3.16
72 73 1.006102 CGCGAGGGTCTTGAACTGT 60.006 57.895 0.00 0.00 0.00 3.55
73 74 0.600255 CGCGAGGGTCTTGAACTGTT 60.600 55.000 0.00 0.00 0.00 3.16
74 75 0.868406 GCGAGGGTCTTGAACTGTTG 59.132 55.000 0.00 0.00 0.00 3.33
75 76 1.540363 GCGAGGGTCTTGAACTGTTGA 60.540 52.381 0.00 0.00 0.00 3.18
76 77 2.872038 GCGAGGGTCTTGAACTGTTGAT 60.872 50.000 0.00 0.00 0.00 2.57
77 78 2.738846 CGAGGGTCTTGAACTGTTGATG 59.261 50.000 0.00 0.00 0.00 3.07
78 79 3.744660 GAGGGTCTTGAACTGTTGATGT 58.255 45.455 0.00 0.00 0.00 3.06
79 80 3.744660 AGGGTCTTGAACTGTTGATGTC 58.255 45.455 0.00 0.00 0.00 3.06
80 81 2.480419 GGGTCTTGAACTGTTGATGTCG 59.520 50.000 0.00 0.00 0.00 4.35
81 82 3.390135 GGTCTTGAACTGTTGATGTCGA 58.610 45.455 0.00 0.00 0.00 4.20
82 83 3.807622 GGTCTTGAACTGTTGATGTCGAA 59.192 43.478 0.00 0.00 0.00 3.71
83 84 4.272504 GGTCTTGAACTGTTGATGTCGAAA 59.727 41.667 0.00 0.00 0.00 3.46
84 85 5.198274 GTCTTGAACTGTTGATGTCGAAAC 58.802 41.667 0.00 0.00 0.00 2.78
85 86 4.272504 TCTTGAACTGTTGATGTCGAAACC 59.727 41.667 0.00 0.00 0.00 3.27
86 87 2.542178 TGAACTGTTGATGTCGAAACCG 59.458 45.455 0.00 0.00 0.00 4.44
87 88 1.508632 ACTGTTGATGTCGAAACCGG 58.491 50.000 0.00 0.00 0.00 5.28
88 89 0.796312 CTGTTGATGTCGAAACCGGG 59.204 55.000 6.32 0.00 0.00 5.73
89 90 1.231958 TGTTGATGTCGAAACCGGGC 61.232 55.000 6.32 0.00 0.00 6.13
90 91 1.673009 TTGATGTCGAAACCGGGCC 60.673 57.895 6.32 0.00 0.00 5.80
91 92 3.192922 GATGTCGAAACCGGGCCG 61.193 66.667 21.46 21.46 0.00 6.13
92 93 3.945304 GATGTCGAAACCGGGCCGT 62.945 63.158 26.32 10.35 0.00 5.68
93 94 2.561549 GATGTCGAAACCGGGCCGTA 62.562 60.000 26.32 0.00 0.00 4.02
94 95 2.048316 GTCGAAACCGGGCCGTAA 60.048 61.111 26.32 0.00 0.00 3.18
95 96 2.048316 TCGAAACCGGGCCGTAAC 60.048 61.111 26.32 11.95 0.00 2.50
96 97 2.357275 CGAAACCGGGCCGTAACA 60.357 61.111 26.32 0.00 0.00 2.41
97 98 2.385091 CGAAACCGGGCCGTAACAG 61.385 63.158 26.32 11.62 0.00 3.16
98 99 2.032987 AAACCGGGCCGTAACAGG 59.967 61.111 26.32 10.81 0.00 4.00
106 107 2.493030 CCGTAACAGGCCGACGAT 59.507 61.111 19.67 1.69 38.88 3.73
107 108 1.876714 CCGTAACAGGCCGACGATG 60.877 63.158 19.67 5.82 38.88 3.84
108 109 1.876714 CGTAACAGGCCGACGATGG 60.877 63.158 14.79 0.00 38.88 3.51
109 110 1.514087 GTAACAGGCCGACGATGGA 59.486 57.895 0.00 0.00 0.00 3.41
110 111 0.527817 GTAACAGGCCGACGATGGAG 60.528 60.000 0.00 0.00 0.00 3.86
111 112 2.292794 TAACAGGCCGACGATGGAGC 62.293 60.000 0.00 0.00 0.00 4.70
112 113 4.899239 CAGGCCGACGATGGAGCC 62.899 72.222 0.00 0.00 46.13 4.70
116 117 4.129737 CCGACGATGGAGCCACGT 62.130 66.667 13.99 13.99 42.84 4.49
117 118 2.880879 CGACGATGGAGCCACGTG 60.881 66.667 9.08 9.08 40.29 4.49
118 119 2.509336 GACGATGGAGCCACGTGG 60.509 66.667 30.66 30.66 40.29 4.94
119 120 3.296709 GACGATGGAGCCACGTGGT 62.297 63.158 33.92 21.33 40.29 4.16
120 121 2.815211 CGATGGAGCCACGTGGTG 60.815 66.667 33.92 11.99 37.57 4.17
140 141 4.711949 CCGCAGGCAGGCAAGTCT 62.712 66.667 0.00 0.00 46.14 3.24
141 142 3.429141 CGCAGGCAGGCAAGTCTG 61.429 66.667 7.14 7.14 43.93 3.51
142 143 3.060615 GCAGGCAGGCAAGTCTGG 61.061 66.667 12.46 0.00 41.45 3.86
143 144 2.752358 CAGGCAGGCAAGTCTGGA 59.248 61.111 3.62 0.00 37.58 3.86
144 145 1.302285 CAGGCAGGCAAGTCTGGAT 59.698 57.895 3.62 0.00 37.58 3.41
145 146 0.543277 CAGGCAGGCAAGTCTGGATA 59.457 55.000 3.62 0.00 37.58 2.59
146 147 0.543749 AGGCAGGCAAGTCTGGATAC 59.456 55.000 3.62 0.00 35.43 2.24
147 148 0.464554 GGCAGGCAAGTCTGGATACC 60.465 60.000 3.62 0.00 35.43 2.73
148 149 0.464554 GCAGGCAAGTCTGGATACCC 60.465 60.000 3.62 0.00 35.43 3.69
149 150 0.181350 CAGGCAAGTCTGGATACCCC 59.819 60.000 0.00 0.00 0.00 4.95
150 151 0.988678 AGGCAAGTCTGGATACCCCC 60.989 60.000 0.00 0.00 0.00 5.40
151 152 1.279025 GGCAAGTCTGGATACCCCCA 61.279 60.000 0.00 0.00 34.52 4.96
152 153 0.846693 GCAAGTCTGGATACCCCCAT 59.153 55.000 0.00 0.00 35.33 4.00
153 154 2.054799 GCAAGTCTGGATACCCCCATA 58.945 52.381 0.00 0.00 35.33 2.74
154 155 2.644798 GCAAGTCTGGATACCCCCATAT 59.355 50.000 0.00 0.00 35.33 1.78
155 156 3.074538 GCAAGTCTGGATACCCCCATATT 59.925 47.826 0.00 0.00 35.33 1.28
156 157 4.807643 GCAAGTCTGGATACCCCCATATTC 60.808 50.000 0.00 0.00 35.33 1.75
157 158 4.228237 AGTCTGGATACCCCCATATTCA 57.772 45.455 0.00 0.00 35.33 2.57
158 159 4.779386 AGTCTGGATACCCCCATATTCAT 58.221 43.478 0.00 0.00 35.33 2.57
159 160 5.927465 AGTCTGGATACCCCCATATTCATA 58.073 41.667 0.00 0.00 35.33 2.15
160 161 6.339220 AGTCTGGATACCCCCATATTCATAA 58.661 40.000 0.00 0.00 35.33 1.90
161 162 6.215636 AGTCTGGATACCCCCATATTCATAAC 59.784 42.308 0.00 0.00 35.33 1.89
162 163 5.188948 TCTGGATACCCCCATATTCATAACG 59.811 44.000 0.00 0.00 35.33 3.18
163 164 4.196971 GGATACCCCCATATTCATAACGC 58.803 47.826 0.00 0.00 0.00 4.84
164 165 2.579410 ACCCCCATATTCATAACGCC 57.421 50.000 0.00 0.00 0.00 5.68
165 166 1.777878 ACCCCCATATTCATAACGCCA 59.222 47.619 0.00 0.00 0.00 5.69
166 167 2.175931 ACCCCCATATTCATAACGCCAA 59.824 45.455 0.00 0.00 0.00 4.52
167 168 2.556622 CCCCCATATTCATAACGCCAAC 59.443 50.000 0.00 0.00 0.00 3.77
543 552 4.886247 AAACGATGAAGAAACGGTGAAA 57.114 36.364 0.00 0.00 0.00 2.69
586 597 0.188342 ATGAGAGAGGGAGAGAGGGC 59.812 60.000 0.00 0.00 0.00 5.19
587 598 1.528309 GAGAGAGGGAGAGAGGGCG 60.528 68.421 0.00 0.00 0.00 6.13
588 599 1.990160 GAGAGAGGGAGAGAGGGCGA 61.990 65.000 0.00 0.00 0.00 5.54
642 664 1.928567 GGTGGGTGGGAAGATGGGA 60.929 63.158 0.00 0.00 0.00 4.37
667 693 2.184830 GGGCTCGGGCGAAATAACC 61.185 63.158 0.00 0.00 39.81 2.85
675 701 2.618839 CGAAATAACCGCTCGCCG 59.381 61.111 0.00 0.00 0.00 6.46
676 702 2.323447 GAAATAACCGCTCGCCGC 59.677 61.111 0.00 0.00 35.03 6.53
706 732 0.469331 CAGGGACTATGGCGGTAGGA 60.469 60.000 2.44 0.00 36.02 2.94
741 773 0.525668 CGACAGCCGTTACTGCTAGG 60.526 60.000 0.13 0.00 41.60 3.02
785 817 2.038490 GGGTCCCTGACGGTAGGT 59.962 66.667 0.00 0.00 36.02 3.08
807 839 3.296854 TGTCTAACCCTATCGTCAGCAT 58.703 45.455 0.00 0.00 0.00 3.79
809 842 3.570550 GTCTAACCCTATCGTCAGCATCT 59.429 47.826 0.00 0.00 0.00 2.90
827 861 4.454504 GCATCTTGACGGTAAGAAAAAGGA 59.545 41.667 7.55 0.00 39.87 3.36
829 863 6.349363 GCATCTTGACGGTAAGAAAAAGGATT 60.349 38.462 7.55 0.00 39.87 3.01
830 864 6.554334 TCTTGACGGTAAGAAAAAGGATTG 57.446 37.500 1.68 0.00 33.96 2.67
832 866 6.768861 TCTTGACGGTAAGAAAAAGGATTGAA 59.231 34.615 1.68 0.00 33.96 2.69
833 867 7.447238 TCTTGACGGTAAGAAAAAGGATTGAAT 59.553 33.333 1.68 0.00 33.96 2.57
862 896 0.999712 ATTCCAACCGGGGTCAGATT 59.000 50.000 6.32 0.00 37.22 2.40
874 908 4.200092 GGGGTCAGATTCTGAATTGGTAC 58.800 47.826 17.73 4.61 42.46 3.34
881 915 4.330074 AGATTCTGAATTGGTACGCGAAAG 59.670 41.667 15.93 0.00 0.00 2.62
894 928 0.741915 GCGAAAGGGGTCAAAACACA 59.258 50.000 0.00 0.00 0.00 3.72
934 968 2.423185 CTGCACTGGAACACTTTCACAA 59.577 45.455 0.00 0.00 32.80 3.33
1107 1146 3.488090 GCCTCGGCGTTTCGGAAG 61.488 66.667 6.85 0.00 0.00 3.46
1171 1210 2.125512 CTGTGCTGTACCGAGCCC 60.126 66.667 2.98 0.00 38.28 5.19
1182 1221 2.504244 CGAGCCCTCGTGTCGAAC 60.504 66.667 9.41 0.00 46.99 3.95
1183 1222 2.649034 GAGCCCTCGTGTCGAACA 59.351 61.111 0.00 0.00 34.74 3.18
1191 1230 2.028484 GTGTCGAACACGCCTCCA 59.972 61.111 0.00 0.00 39.53 3.86
1240 1288 1.159905 TGGGACCCACCTCTTGCTA 59.840 57.895 9.95 0.00 38.98 3.49
1255 1303 2.886134 GCTACGGTTGTGGTCCCCA 61.886 63.158 0.00 0.00 0.00 4.96
1257 1305 0.108963 CTACGGTTGTGGTCCCCAAA 59.891 55.000 0.00 0.00 34.18 3.28
1324 1372 2.364448 GCTTCCGTCTCCCCTCCT 60.364 66.667 0.00 0.00 0.00 3.69
1339 1387 0.689412 CTCCTCCTTCTCCACCTCCC 60.689 65.000 0.00 0.00 0.00 4.30
1349 1397 2.660064 CCACCTCCCCCTCGTTGAG 61.660 68.421 0.00 0.00 0.00 3.02
1362 1410 0.034059 CGTTGAGGTTGCCAGTCTCT 59.966 55.000 0.00 0.00 0.00 3.10
1363 1411 1.802069 GTTGAGGTTGCCAGTCTCTC 58.198 55.000 0.00 0.00 0.00 3.20
1431 1479 5.439721 ACATATTTCAGGTTGCTAGCATGA 58.560 37.500 20.13 16.66 0.00 3.07
1432 1480 5.530171 ACATATTTCAGGTTGCTAGCATGAG 59.470 40.000 20.13 9.46 0.00 2.90
1433 1481 1.742761 TTCAGGTTGCTAGCATGAGC 58.257 50.000 20.13 14.38 43.16 4.26
1448 1496 3.329386 CATGAGCATACTGTTATCCGGG 58.671 50.000 0.00 0.00 0.00 5.73
1466 1518 2.671070 CGGGCCTCATTTGTTTTGCTAC 60.671 50.000 0.84 0.00 0.00 3.58
1469 1521 4.402474 GGGCCTCATTTGTTTTGCTACTAT 59.598 41.667 0.84 0.00 0.00 2.12
1482 1534 9.969001 TGTTTTGCTACTATCCCTAATTTTAGT 57.031 29.630 0.00 0.00 0.00 2.24
1493 1545 5.479027 TCCCTAATTTTAGTGTTTGGCCTTC 59.521 40.000 3.32 0.00 0.00 3.46
1514 1566 5.618056 TCAGAATCAACTGATCAAGCAAC 57.382 39.130 0.00 0.00 41.21 4.17
1516 1568 5.766670 TCAGAATCAACTGATCAAGCAACTT 59.233 36.000 0.00 0.00 41.21 2.66
1524 1576 4.040217 ACTGATCAAGCAACTTCTCTGTCT 59.960 41.667 0.00 0.00 0.00 3.41
1525 1577 5.244851 ACTGATCAAGCAACTTCTCTGTCTA 59.755 40.000 0.00 0.00 0.00 2.59
1526 1578 6.070881 ACTGATCAAGCAACTTCTCTGTCTAT 60.071 38.462 0.00 0.00 0.00 1.98
1527 1579 6.104665 TGATCAAGCAACTTCTCTGTCTATG 58.895 40.000 0.00 0.00 0.00 2.23
1528 1580 5.474578 TCAAGCAACTTCTCTGTCTATGT 57.525 39.130 0.00 0.00 0.00 2.29
1529 1581 6.590234 TCAAGCAACTTCTCTGTCTATGTA 57.410 37.500 0.00 0.00 0.00 2.29
1530 1582 7.175347 TCAAGCAACTTCTCTGTCTATGTAT 57.825 36.000 0.00 0.00 0.00 2.29
1531 1583 7.038048 TCAAGCAACTTCTCTGTCTATGTATG 58.962 38.462 0.00 0.00 0.00 2.39
1532 1584 5.911752 AGCAACTTCTCTGTCTATGTATGG 58.088 41.667 0.00 0.00 0.00 2.74
1533 1585 5.658634 AGCAACTTCTCTGTCTATGTATGGA 59.341 40.000 0.00 0.00 0.00 3.41
1534 1586 6.326064 AGCAACTTCTCTGTCTATGTATGGAT 59.674 38.462 0.00 0.00 0.00 3.41
1535 1587 7.507277 AGCAACTTCTCTGTCTATGTATGGATA 59.493 37.037 0.00 0.00 0.00 2.59
1536 1588 7.812191 GCAACTTCTCTGTCTATGTATGGATAG 59.188 40.741 0.00 0.00 0.00 2.08
1537 1589 9.072375 CAACTTCTCTGTCTATGTATGGATAGA 57.928 37.037 4.99 4.99 35.08 1.98
1538 1590 9.821240 AACTTCTCTGTCTATGTATGGATAGAT 57.179 33.333 5.43 0.00 37.30 1.98
1539 1591 9.821240 ACTTCTCTGTCTATGTATGGATAGATT 57.179 33.333 5.43 0.00 37.30 2.40
1541 1593 9.593565 TTCTCTGTCTATGTATGGATAGATTGT 57.406 33.333 5.43 0.00 37.30 2.71
1542 1594 9.593565 TCTCTGTCTATGTATGGATAGATTGTT 57.406 33.333 5.43 0.00 37.30 2.83
1545 1597 9.561270 CTGTCTATGTATGGATAGATTGTTACG 57.439 37.037 0.00 0.00 37.30 3.18
1546 1598 9.292195 TGTCTATGTATGGATAGATTGTTACGA 57.708 33.333 0.00 0.00 37.30 3.43
1549 1601 7.834068 ATGTATGGATAGATTGTTACGATGC 57.166 36.000 0.00 0.00 0.00 3.91
1550 1602 6.754193 TGTATGGATAGATTGTTACGATGCA 58.246 36.000 0.00 0.00 0.00 3.96
1551 1603 6.868339 TGTATGGATAGATTGTTACGATGCAG 59.132 38.462 0.00 0.00 0.00 4.41
1552 1604 4.058124 TGGATAGATTGTTACGATGCAGC 58.942 43.478 0.00 0.00 0.00 5.25
1553 1605 4.202253 TGGATAGATTGTTACGATGCAGCT 60.202 41.667 0.00 0.00 0.00 4.24
1554 1606 4.752101 GGATAGATTGTTACGATGCAGCTT 59.248 41.667 0.00 0.00 0.00 3.74
1555 1607 5.237344 GGATAGATTGTTACGATGCAGCTTT 59.763 40.000 0.00 0.00 0.00 3.51
1556 1608 6.423905 GGATAGATTGTTACGATGCAGCTTTA 59.576 38.462 0.00 0.00 0.00 1.85
1557 1609 7.118390 GGATAGATTGTTACGATGCAGCTTTAT 59.882 37.037 0.00 0.00 0.00 1.40
1558 1610 6.292389 AGATTGTTACGATGCAGCTTTATC 57.708 37.500 0.00 0.00 0.00 1.75
1559 1611 6.051717 AGATTGTTACGATGCAGCTTTATCT 58.948 36.000 0.00 0.00 0.00 1.98
1560 1612 6.540189 AGATTGTTACGATGCAGCTTTATCTT 59.460 34.615 0.00 0.00 0.00 2.40
1561 1613 5.718649 TGTTACGATGCAGCTTTATCTTC 57.281 39.130 0.00 0.00 0.00 2.87
1569 1621 2.352960 GCAGCTTTATCTTCGGGAACAG 59.647 50.000 0.00 0.00 0.00 3.16
1577 1629 2.593026 TCTTCGGGAACAGCCAATTTT 58.407 42.857 0.00 0.00 38.95 1.82
1592 1644 3.377798 CCAATTTTATTTGGTGGGCATGC 59.622 43.478 9.90 9.90 41.09 4.06
1603 1655 2.004017 GTGGGCATGCACATGAATTTG 58.996 47.619 28.20 0.00 41.20 2.32
1620 1672 8.600625 CATGAATTTGGATGTTAAAATCTGCAG 58.399 33.333 7.63 7.63 0.00 4.41
1636 1689 3.840666 TCTGCAGACCTTAAGGAGTGAAT 59.159 43.478 28.52 3.89 38.94 2.57
1640 1693 5.189180 GCAGACCTTAAGGAGTGAATGAAT 58.811 41.667 28.52 0.61 38.94 2.57
1641 1694 6.070251 TGCAGACCTTAAGGAGTGAATGAATA 60.070 38.462 28.52 4.97 38.94 1.75
1642 1695 6.258947 GCAGACCTTAAGGAGTGAATGAATAC 59.741 42.308 28.52 5.54 38.94 1.89
1643 1696 6.477033 CAGACCTTAAGGAGTGAATGAATACG 59.523 42.308 28.52 0.00 38.94 3.06
1665 1718 6.802608 ACGTACACTTATAGCTGCTGATTTA 58.197 36.000 13.43 0.00 0.00 1.40
1668 1721 8.851416 CGTACACTTATAGCTGCTGATTTATAC 58.149 37.037 13.43 6.10 0.00 1.47
1670 1723 7.658261 ACACTTATAGCTGCTGATTTATACGA 58.342 34.615 13.43 0.00 0.00 3.43
1672 1725 7.595130 CACTTATAGCTGCTGATTTATACGACA 59.405 37.037 13.43 0.00 0.00 4.35
1728 1781 6.045955 GGATCTGTTCCACTGAGAGAAATAC 58.954 44.000 0.00 0.00 44.74 1.89
1729 1782 6.127196 GGATCTGTTCCACTGAGAGAAATACT 60.127 42.308 0.00 0.00 44.74 2.12
1730 1783 6.030548 TCTGTTCCACTGAGAGAAATACTG 57.969 41.667 0.00 0.00 0.00 2.74
1731 1784 4.569943 TGTTCCACTGAGAGAAATACTGC 58.430 43.478 0.00 0.00 0.00 4.40
1732 1785 4.284490 TGTTCCACTGAGAGAAATACTGCT 59.716 41.667 0.00 0.00 0.00 4.24
1733 1786 5.480422 TGTTCCACTGAGAGAAATACTGCTA 59.520 40.000 0.00 0.00 0.00 3.49
1734 1787 5.843673 TCCACTGAGAGAAATACTGCTAG 57.156 43.478 0.00 0.00 0.00 3.42
1757 1811 5.300286 AGCTAACATGTCAAATGATTAGCCC 59.700 40.000 16.86 0.13 43.49 5.19
1945 2001 1.225855 TGTGTTTCAGCTTAGCACGG 58.774 50.000 7.07 0.00 33.23 4.94
2112 2170 8.603242 ACAATAAGACCATTATATTGACGACC 57.397 34.615 10.69 0.00 38.64 4.79
2368 2426 0.610232 AAGGCTGGATTTCTTGCGCT 60.610 50.000 9.73 0.00 0.00 5.92
2410 2468 6.183309 ACAGCTTCATTTTCTCGGTAAATC 57.817 37.500 0.00 0.00 0.00 2.17
2508 2566 9.118236 CTTTTCCTAAAAATAGCGAACTTGAAG 57.882 33.333 0.00 0.00 34.00 3.02
2760 2818 0.103208 CACGACTGAGATACCCTGGC 59.897 60.000 0.00 0.00 0.00 4.85
3001 3059 4.458989 TGTCTATGCCACCAAGCTTAAAAG 59.541 41.667 0.00 0.00 0.00 2.27
3191 3256 5.856156 AGACATGTTTTTGGATGCAAATGA 58.144 33.333 13.51 2.88 0.00 2.57
3267 3332 7.770801 AGAAAAATGTACTTGAAAGGTTTGC 57.229 32.000 0.00 0.00 0.00 3.68
3446 3512 4.532314 AGTTTGACGTAGGACTTAAGGG 57.468 45.455 7.53 0.00 0.00 3.95
3506 3572 6.859112 ACATTACTGATTAGACACTGTCCT 57.141 37.500 5.51 0.00 32.18 3.85
3628 3694 4.667573 AGCCAGATTATATCTCGAGGACA 58.332 43.478 13.56 0.00 37.58 4.02
3671 3737 5.907207 TCAGTGTTATGCATCCTCTACTTC 58.093 41.667 0.19 0.00 0.00 3.01
3733 3799 4.136796 CTCCAGTTTCCATTTGACAGTGA 58.863 43.478 0.00 0.00 0.00 3.41
3747 3813 0.801251 CAGTGAAGCTGCAGCCTTAC 59.199 55.000 34.39 27.32 43.38 2.34
3748 3814 0.397941 AGTGAAGCTGCAGCCTTACA 59.602 50.000 34.39 24.12 43.38 2.41
3828 3894 5.092105 CGACAGAGACAGTTGTAGAATCAG 58.908 45.833 0.00 0.00 0.00 2.90
3831 3897 5.047660 ACAGAGACAGTTGTAGAATCAGACC 60.048 44.000 0.00 0.00 0.00 3.85
3878 3944 5.277250 TGGACACAGGATTGGTAGATAAGA 58.723 41.667 0.00 0.00 0.00 2.10
3879 3945 5.363868 TGGACACAGGATTGGTAGATAAGAG 59.636 44.000 0.00 0.00 0.00 2.85
3880 3946 5.221541 GGACACAGGATTGGTAGATAAGAGG 60.222 48.000 0.00 0.00 0.00 3.69
3881 3947 5.529289 ACACAGGATTGGTAGATAAGAGGA 58.471 41.667 0.00 0.00 0.00 3.71
3882 3948 6.146760 ACACAGGATTGGTAGATAAGAGGAT 58.853 40.000 0.00 0.00 0.00 3.24
3883 3949 6.268847 ACACAGGATTGGTAGATAAGAGGATC 59.731 42.308 0.00 0.00 0.00 3.36
3895 3961 3.928343 GAGGATCTCCACTCGTTCG 57.072 57.895 0.00 0.00 38.89 3.95
3896 3962 0.382515 GAGGATCTCCACTCGTTCGG 59.617 60.000 0.00 0.00 38.89 4.30
3897 3963 1.227002 GGATCTCCACTCGTTCGGC 60.227 63.158 0.00 0.00 35.64 5.54
3898 3964 1.227002 GATCTCCACTCGTTCGGCC 60.227 63.158 0.00 0.00 0.00 6.13
3899 3965 2.630592 GATCTCCACTCGTTCGGCCC 62.631 65.000 0.00 0.00 0.00 5.80
3900 3966 4.452733 CTCCACTCGTTCGGCCCC 62.453 72.222 0.00 0.00 0.00 5.80
3925 3991 4.789123 ACCCGCCGGCGCTATTTT 62.789 61.111 42.39 18.81 38.24 1.82
3926 3992 4.250431 CCCGCCGGCGCTATTTTG 62.250 66.667 42.39 26.13 38.24 2.44
3927 3993 4.250431 CCGCCGGCGCTATTTTGG 62.250 66.667 42.39 22.74 38.24 3.28
3928 3994 4.905193 CGCCGGCGCTATTTTGGC 62.905 66.667 38.48 10.55 42.29 4.52
3929 3995 4.569023 GCCGGCGCTATTTTGGCC 62.569 66.667 12.58 0.00 43.42 5.36
3930 3996 3.899700 CCGGCGCTATTTTGGCCC 61.900 66.667 7.64 0.00 43.99 5.80
3931 3997 2.828549 CGGCGCTATTTTGGCCCT 60.829 61.111 7.64 0.00 43.99 5.19
3932 3998 2.414785 CGGCGCTATTTTGGCCCTT 61.415 57.895 7.64 0.00 43.99 3.95
3933 3999 1.897423 GGCGCTATTTTGGCCCTTT 59.103 52.632 7.64 0.00 41.01 3.11
3934 4000 0.460109 GGCGCTATTTTGGCCCTTTG 60.460 55.000 7.64 0.00 41.01 2.77
3935 4001 0.460109 GCGCTATTTTGGCCCTTTGG 60.460 55.000 0.00 0.00 0.00 3.28
3946 4012 3.989787 CCTTTGGCCGGCGCTTTT 61.990 61.111 22.54 0.00 34.44 2.27
3947 4013 2.028925 CTTTGGCCGGCGCTTTTT 59.971 55.556 22.54 0.00 34.44 1.94
3948 4014 2.021584 CTTTGGCCGGCGCTTTTTC 61.022 57.895 22.54 4.79 34.44 2.29
3949 4015 3.832720 TTTGGCCGGCGCTTTTTCG 62.833 57.895 22.54 0.73 34.44 3.46
3956 4022 4.419939 GCGCTTTTTCGGCCCTGG 62.420 66.667 0.00 0.00 0.00 4.45
3957 4023 3.747976 CGCTTTTTCGGCCCTGGG 61.748 66.667 8.86 8.86 0.00 4.45
3958 4024 2.282887 GCTTTTTCGGCCCTGGGA 60.283 61.111 19.27 0.00 0.00 4.37
3959 4025 2.343426 GCTTTTTCGGCCCTGGGAG 61.343 63.158 19.27 9.78 0.00 4.30
3960 4026 2.282887 TTTTTCGGCCCTGGGAGC 60.283 61.111 19.27 0.75 0.00 4.70
3961 4027 4.715523 TTTTCGGCCCTGGGAGCG 62.716 66.667 19.27 0.00 0.00 5.03
3966 4032 2.524394 GGCCCTGGGAGCGATCTA 60.524 66.667 19.27 0.00 0.00 1.98
3967 4033 2.578714 GGCCCTGGGAGCGATCTAG 61.579 68.421 19.27 0.00 0.00 2.43
3968 4034 1.834822 GCCCTGGGAGCGATCTAGT 60.835 63.158 19.27 0.00 0.00 2.57
3969 4035 1.403687 GCCCTGGGAGCGATCTAGTT 61.404 60.000 19.27 0.00 0.00 2.24
3970 4036 0.676736 CCCTGGGAGCGATCTAGTTC 59.323 60.000 7.01 0.00 0.00 3.01
3971 4037 0.676736 CCTGGGAGCGATCTAGTTCC 59.323 60.000 0.00 0.00 40.28 3.62
3975 4041 0.032815 GGAGCGATCTAGTTCCCAGC 59.967 60.000 0.00 0.00 35.77 4.85
3976 4042 0.032815 GAGCGATCTAGTTCCCAGCC 59.967 60.000 0.00 0.00 0.00 4.85
3977 4043 0.687757 AGCGATCTAGTTCCCAGCCA 60.688 55.000 0.00 0.00 0.00 4.75
3978 4044 0.530870 GCGATCTAGTTCCCAGCCAC 60.531 60.000 0.00 0.00 0.00 5.01
3979 4045 0.249073 CGATCTAGTTCCCAGCCACG 60.249 60.000 0.00 0.00 0.00 4.94
3980 4046 0.530870 GATCTAGTTCCCAGCCACGC 60.531 60.000 0.00 0.00 0.00 5.34
3981 4047 1.972660 ATCTAGTTCCCAGCCACGCC 61.973 60.000 0.00 0.00 0.00 5.68
3982 4048 3.682292 CTAGTTCCCAGCCACGCCC 62.682 68.421 0.00 0.00 0.00 6.13
4005 4071 3.782443 GGTCGGCCCCAAGACGAT 61.782 66.667 0.00 0.00 38.99 3.73
4006 4072 2.428925 GGTCGGCCCCAAGACGATA 61.429 63.158 0.00 0.00 38.99 2.92
4007 4073 1.746517 GTCGGCCCCAAGACGATAT 59.253 57.895 0.00 0.00 38.99 1.63
4008 4074 0.963962 GTCGGCCCCAAGACGATATA 59.036 55.000 0.00 0.00 38.99 0.86
4009 4075 1.342174 GTCGGCCCCAAGACGATATAA 59.658 52.381 0.00 0.00 38.99 0.98
4010 4076 2.040939 TCGGCCCCAAGACGATATAAA 58.959 47.619 0.00 0.00 0.00 1.40
4011 4077 2.635915 TCGGCCCCAAGACGATATAAAT 59.364 45.455 0.00 0.00 0.00 1.40
4012 4078 3.071892 TCGGCCCCAAGACGATATAAATT 59.928 43.478 0.00 0.00 0.00 1.82
4013 4079 3.435671 CGGCCCCAAGACGATATAAATTC 59.564 47.826 0.00 0.00 0.00 2.17
4014 4080 4.394729 GGCCCCAAGACGATATAAATTCA 58.605 43.478 0.00 0.00 0.00 2.57
4015 4081 4.825085 GGCCCCAAGACGATATAAATTCAA 59.175 41.667 0.00 0.00 0.00 2.69
4016 4082 5.300792 GGCCCCAAGACGATATAAATTCAAA 59.699 40.000 0.00 0.00 0.00 2.69
4017 4083 6.206498 GCCCCAAGACGATATAAATTCAAAC 58.794 40.000 0.00 0.00 0.00 2.93
4018 4084 6.183360 GCCCCAAGACGATATAAATTCAAACA 60.183 38.462 0.00 0.00 0.00 2.83
4019 4085 7.470009 GCCCCAAGACGATATAAATTCAAACAT 60.470 37.037 0.00 0.00 0.00 2.71
4020 4086 7.862372 CCCCAAGACGATATAAATTCAAACATG 59.138 37.037 0.00 0.00 0.00 3.21
4021 4087 8.620416 CCCAAGACGATATAAATTCAAACATGA 58.380 33.333 0.00 0.00 0.00 3.07
4022 4088 9.438291 CCAAGACGATATAAATTCAAACATGAC 57.562 33.333 0.00 0.00 0.00 3.06
4023 4089 9.986833 CAAGACGATATAAATTCAAACATGACA 57.013 29.630 0.00 0.00 0.00 3.58
4030 4096 9.748708 ATATAAATTCAAACATGACATTTCCCG 57.251 29.630 0.00 0.00 0.00 5.14
4031 4097 3.296322 TTCAAACATGACATTTCCCGC 57.704 42.857 0.00 0.00 0.00 6.13
4032 4098 2.513753 TCAAACATGACATTTCCCGCT 58.486 42.857 0.00 0.00 0.00 5.52
4033 4099 3.680490 TCAAACATGACATTTCCCGCTA 58.320 40.909 0.00 0.00 0.00 4.26
4034 4100 3.438781 TCAAACATGACATTTCCCGCTAC 59.561 43.478 0.00 0.00 0.00 3.58
4035 4101 2.038387 ACATGACATTTCCCGCTACC 57.962 50.000 0.00 0.00 0.00 3.18
4036 4102 1.308998 CATGACATTTCCCGCTACCC 58.691 55.000 0.00 0.00 0.00 3.69
4037 4103 0.916086 ATGACATTTCCCGCTACCCA 59.084 50.000 0.00 0.00 0.00 4.51
4038 4104 0.693622 TGACATTTCCCGCTACCCAA 59.306 50.000 0.00 0.00 0.00 4.12
4039 4105 1.339631 TGACATTTCCCGCTACCCAAG 60.340 52.381 0.00 0.00 0.00 3.61
4040 4106 0.988832 ACATTTCCCGCTACCCAAGA 59.011 50.000 0.00 0.00 0.00 3.02
4041 4107 1.353022 ACATTTCCCGCTACCCAAGAA 59.647 47.619 0.00 0.00 0.00 2.52
4042 4108 2.224917 ACATTTCCCGCTACCCAAGAAA 60.225 45.455 0.00 0.00 0.00 2.52
4043 4109 1.900245 TTTCCCGCTACCCAAGAAAC 58.100 50.000 0.00 0.00 0.00 2.78
4044 4110 0.320946 TTCCCGCTACCCAAGAAACG 60.321 55.000 0.00 0.00 0.00 3.60
4045 4111 2.396157 CCCGCTACCCAAGAAACGC 61.396 63.158 0.00 0.00 0.00 4.84
4046 4112 2.396157 CCGCTACCCAAGAAACGCC 61.396 63.158 0.00 0.00 0.00 5.68
4047 4113 1.669760 CGCTACCCAAGAAACGCCA 60.670 57.895 0.00 0.00 0.00 5.69
4048 4114 1.873863 GCTACCCAAGAAACGCCAC 59.126 57.895 0.00 0.00 0.00 5.01
4049 4115 0.887387 GCTACCCAAGAAACGCCACA 60.887 55.000 0.00 0.00 0.00 4.17
4050 4116 1.600023 CTACCCAAGAAACGCCACAA 58.400 50.000 0.00 0.00 0.00 3.33
4051 4117 1.535462 CTACCCAAGAAACGCCACAAG 59.465 52.381 0.00 0.00 0.00 3.16
4052 4118 0.395173 ACCCAAGAAACGCCACAAGT 60.395 50.000 0.00 0.00 0.00 3.16
4053 4119 0.310854 CCCAAGAAACGCCACAAGTC 59.689 55.000 0.00 0.00 0.00 3.01
4054 4120 0.310854 CCAAGAAACGCCACAAGTCC 59.689 55.000 0.00 0.00 0.00 3.85
4055 4121 0.041312 CAAGAAACGCCACAAGTCCG 60.041 55.000 0.00 0.00 0.00 4.79
4056 4122 1.164041 AAGAAACGCCACAAGTCCGG 61.164 55.000 0.00 0.00 0.00 5.14
4057 4123 3.249973 GAAACGCCACAAGTCCGGC 62.250 63.158 0.00 0.00 45.28 6.13
4061 4127 3.195698 GCCACAAGTCCGGCGATC 61.196 66.667 9.30 0.00 38.82 3.69
4062 4128 2.264480 CCACAAGTCCGGCGATCA 59.736 61.111 9.30 0.00 0.00 2.92
4063 4129 1.811266 CCACAAGTCCGGCGATCAG 60.811 63.158 9.30 0.00 0.00 2.90
4073 4139 2.962253 GCGATCAGCGGCTACCAC 60.962 66.667 0.26 0.00 41.29 4.16
4074 4140 2.494445 CGATCAGCGGCTACCACA 59.506 61.111 0.26 0.00 36.03 4.17
4075 4141 1.068083 CGATCAGCGGCTACCACAT 59.932 57.895 0.26 0.00 36.03 3.21
4076 4142 0.313987 CGATCAGCGGCTACCACATA 59.686 55.000 0.26 0.00 36.03 2.29
4077 4143 1.667177 CGATCAGCGGCTACCACATAG 60.667 57.143 0.26 0.00 36.03 2.23
4078 4144 1.341531 GATCAGCGGCTACCACATAGT 59.658 52.381 0.26 0.00 32.90 2.12
4079 4145 1.191535 TCAGCGGCTACCACATAGTT 58.808 50.000 0.26 0.00 32.90 2.24
4080 4146 1.136305 TCAGCGGCTACCACATAGTTC 59.864 52.381 0.26 0.00 32.90 3.01
4081 4147 1.134818 CAGCGGCTACCACATAGTTCA 60.135 52.381 0.26 0.00 32.90 3.18
4082 4148 1.134788 AGCGGCTACCACATAGTTCAC 60.135 52.381 0.00 0.00 32.90 3.18
4083 4149 1.935933 CGGCTACCACATAGTTCACC 58.064 55.000 0.00 0.00 32.90 4.02
4084 4150 1.206132 CGGCTACCACATAGTTCACCA 59.794 52.381 0.00 0.00 32.90 4.17
4085 4151 2.158957 CGGCTACCACATAGTTCACCAT 60.159 50.000 0.00 0.00 32.90 3.55
4086 4152 3.206150 GGCTACCACATAGTTCACCATG 58.794 50.000 0.00 0.00 32.90 3.66
4087 4153 2.614057 GCTACCACATAGTTCACCATGC 59.386 50.000 0.00 0.00 32.90 4.06
4088 4154 2.128771 ACCACATAGTTCACCATGCC 57.871 50.000 0.00 0.00 0.00 4.40
4089 4155 1.354031 ACCACATAGTTCACCATGCCA 59.646 47.619 0.00 0.00 0.00 4.92
4090 4156 1.745087 CCACATAGTTCACCATGCCAC 59.255 52.381 0.00 0.00 0.00 5.01
4091 4157 2.435422 CACATAGTTCACCATGCCACA 58.565 47.619 0.00 0.00 0.00 4.17
4092 4158 2.421073 CACATAGTTCACCATGCCACAG 59.579 50.000 0.00 0.00 0.00 3.66
4093 4159 2.040278 ACATAGTTCACCATGCCACAGT 59.960 45.455 0.00 0.00 0.00 3.55
4094 4160 2.949177 TAGTTCACCATGCCACAGTT 57.051 45.000 0.00 0.00 0.00 3.16
4095 4161 1.609208 AGTTCACCATGCCACAGTTC 58.391 50.000 0.00 0.00 0.00 3.01
4096 4162 0.238289 GTTCACCATGCCACAGTTCG 59.762 55.000 0.00 0.00 0.00 3.95
4097 4163 0.888736 TTCACCATGCCACAGTTCGG 60.889 55.000 0.00 0.00 0.00 4.30
4103 4169 2.434185 GCCACAGTTCGGCGATCA 60.434 61.111 19.04 0.00 40.35 2.92
4104 4170 2.032634 GCCACAGTTCGGCGATCAA 61.033 57.895 19.04 0.00 40.35 2.57
4105 4171 1.369091 GCCACAGTTCGGCGATCAAT 61.369 55.000 19.04 4.66 40.35 2.57
4106 4172 0.652592 CCACAGTTCGGCGATCAATC 59.347 55.000 19.04 4.90 0.00 2.67
4107 4173 1.358877 CACAGTTCGGCGATCAATCA 58.641 50.000 19.04 0.00 0.00 2.57
4108 4174 1.061131 CACAGTTCGGCGATCAATCAC 59.939 52.381 19.04 9.67 0.00 3.06
4109 4175 1.066858 ACAGTTCGGCGATCAATCACT 60.067 47.619 19.04 11.81 0.00 3.41
4110 4176 1.590238 CAGTTCGGCGATCAATCACTC 59.410 52.381 19.04 0.00 0.00 3.51
4111 4177 1.204704 AGTTCGGCGATCAATCACTCA 59.795 47.619 19.04 0.00 0.00 3.41
4112 4178 1.999735 GTTCGGCGATCAATCACTCAA 59.000 47.619 11.76 0.00 0.00 3.02
4113 4179 2.378445 TCGGCGATCAATCACTCAAA 57.622 45.000 4.99 0.00 0.00 2.69
4114 4180 2.694213 TCGGCGATCAATCACTCAAAA 58.306 42.857 4.99 0.00 0.00 2.44
4115 4181 2.672874 TCGGCGATCAATCACTCAAAAG 59.327 45.455 4.99 0.00 0.00 2.27
4116 4182 2.416547 CGGCGATCAATCACTCAAAAGT 59.583 45.455 0.00 0.00 35.60 2.66
4117 4183 3.120199 CGGCGATCAATCACTCAAAAGTT 60.120 43.478 0.00 0.00 31.71 2.66
4118 4184 4.406943 GGCGATCAATCACTCAAAAGTTC 58.593 43.478 0.00 0.00 31.71 3.01
4119 4185 4.084507 GCGATCAATCACTCAAAAGTTCG 58.915 43.478 0.00 0.00 33.50 3.95
4120 4186 4.641954 CGATCAATCACTCAAAAGTTCGG 58.358 43.478 0.00 0.00 31.71 4.30
4121 4187 3.896648 TCAATCACTCAAAAGTTCGGC 57.103 42.857 0.00 0.00 31.71 5.54
4122 4188 2.223144 TCAATCACTCAAAAGTTCGGCG 59.777 45.455 0.00 0.00 31.71 6.46
4123 4189 1.878953 ATCACTCAAAAGTTCGGCGT 58.121 45.000 6.85 0.00 31.71 5.68
4124 4190 1.658994 TCACTCAAAAGTTCGGCGTT 58.341 45.000 6.85 0.00 31.71 4.84
4125 4191 1.595794 TCACTCAAAAGTTCGGCGTTC 59.404 47.619 6.85 0.96 31.71 3.95
4126 4192 1.329292 CACTCAAAAGTTCGGCGTTCA 59.671 47.619 6.85 0.00 31.71 3.18
4127 4193 2.011222 ACTCAAAAGTTCGGCGTTCAA 58.989 42.857 6.85 0.00 28.74 2.69
4128 4194 2.420722 ACTCAAAAGTTCGGCGTTCAAA 59.579 40.909 6.85 0.00 28.74 2.69
4129 4195 3.119779 ACTCAAAAGTTCGGCGTTCAAAA 60.120 39.130 6.85 0.00 28.74 2.44
4130 4196 3.430931 TCAAAAGTTCGGCGTTCAAAAG 58.569 40.909 6.85 0.00 0.00 2.27
4131 4197 2.485266 AAAGTTCGGCGTTCAAAAGG 57.515 45.000 6.85 0.00 0.00 3.11
4132 4198 1.670791 AAGTTCGGCGTTCAAAAGGA 58.329 45.000 6.85 0.00 0.00 3.36
4133 4199 1.670791 AGTTCGGCGTTCAAAAGGAA 58.329 45.000 6.85 0.00 0.00 3.36
4134 4200 2.018515 AGTTCGGCGTTCAAAAGGAAA 58.981 42.857 6.85 0.00 37.23 3.13
4135 4201 2.032924 AGTTCGGCGTTCAAAAGGAAAG 59.967 45.455 6.85 0.00 37.23 2.62
4136 4202 1.956297 TCGGCGTTCAAAAGGAAAGA 58.044 45.000 6.85 0.00 37.18 2.52
4137 4203 1.600485 TCGGCGTTCAAAAGGAAAGAC 59.400 47.619 6.85 0.00 39.36 3.01
4138 4204 2.032414 GGCGTTCAAAAGGAAAGACG 57.968 50.000 0.00 0.00 37.18 4.18
4139 4205 1.395670 GCGTTCAAAAGGAAAGACGC 58.604 50.000 2.89 2.89 39.98 5.19
4140 4206 1.658968 CGTTCAAAAGGAAAGACGCG 58.341 50.000 3.53 3.53 37.18 6.01
4141 4207 1.004292 CGTTCAAAAGGAAAGACGCGT 60.004 47.619 13.85 13.85 37.18 6.01
4142 4208 2.219216 CGTTCAAAAGGAAAGACGCGTA 59.781 45.455 13.97 0.00 37.18 4.42
4143 4209 3.660904 CGTTCAAAAGGAAAGACGCGTAG 60.661 47.826 13.97 0.00 37.18 3.51
4144 4210 2.409975 TCAAAAGGAAAGACGCGTAGG 58.590 47.619 13.97 0.00 0.00 3.18
4145 4211 1.136057 CAAAAGGAAAGACGCGTAGGC 60.136 52.381 13.97 0.00 0.00 3.93
4146 4212 0.034337 AAAGGAAAGACGCGTAGGCA 59.966 50.000 13.97 0.00 39.92 4.75
4147 4213 0.034337 AAGGAAAGACGCGTAGGCAA 59.966 50.000 13.97 0.00 39.92 4.52
4148 4214 0.249398 AGGAAAGACGCGTAGGCAAT 59.751 50.000 13.97 0.00 39.92 3.56
4149 4215 0.373716 GGAAAGACGCGTAGGCAATG 59.626 55.000 13.97 0.00 39.92 2.82
4150 4216 0.247695 GAAAGACGCGTAGGCAATGC 60.248 55.000 13.97 0.00 39.92 3.56
4151 4217 0.953471 AAAGACGCGTAGGCAATGCA 60.953 50.000 13.97 0.00 40.39 3.96
4152 4218 0.744414 AAGACGCGTAGGCAATGCAT 60.744 50.000 13.97 1.39 40.39 3.96
4153 4219 1.154205 AGACGCGTAGGCAATGCATC 61.154 55.000 13.97 0.00 40.39 3.91
4154 4220 1.428370 GACGCGTAGGCAATGCATCA 61.428 55.000 13.97 0.00 40.39 3.07
4155 4221 1.024046 ACGCGTAGGCAATGCATCAA 61.024 50.000 11.67 0.00 40.39 2.57
4156 4222 0.098552 CGCGTAGGCAATGCATCAAA 59.901 50.000 7.79 0.00 40.39 2.69
4157 4223 1.548986 GCGTAGGCAATGCATCAAAC 58.451 50.000 7.79 0.00 40.09 2.93
4158 4224 1.813896 CGTAGGCAATGCATCAAACG 58.186 50.000 7.79 3.14 0.00 3.60
4159 4225 1.130373 CGTAGGCAATGCATCAAACGT 59.870 47.619 7.79 0.00 0.00 3.99
4160 4226 2.785679 GTAGGCAATGCATCAAACGTC 58.214 47.619 7.79 0.00 0.00 4.34
4161 4227 0.168788 AGGCAATGCATCAAACGTCG 59.831 50.000 7.79 0.00 0.00 5.12
4162 4228 0.798009 GGCAATGCATCAAACGTCGG 60.798 55.000 7.79 0.00 0.00 4.79
4163 4229 1.405469 GCAATGCATCAAACGTCGGC 61.405 55.000 0.00 0.00 0.00 5.54
4164 4230 1.127571 CAATGCATCAAACGTCGGCG 61.128 55.000 8.42 8.42 44.93 6.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.038814 GCCTCCTCAAGCTAGCTCCC 62.039 65.000 19.65 0.00 0.00 4.30
2 3 1.445518 GCCTCCTCAAGCTAGCTCC 59.554 63.158 19.65 0.00 0.00 4.70
3 4 1.445518 GGCCTCCTCAAGCTAGCTC 59.554 63.158 19.65 2.13 0.00 4.09
4 5 2.430610 CGGCCTCCTCAAGCTAGCT 61.431 63.158 12.68 12.68 0.00 3.32
5 6 1.753368 ATCGGCCTCCTCAAGCTAGC 61.753 60.000 6.62 6.62 0.00 3.42
6 7 0.316841 GATCGGCCTCCTCAAGCTAG 59.683 60.000 0.00 0.00 0.00 3.42
7 8 1.115930 GGATCGGCCTCCTCAAGCTA 61.116 60.000 0.00 0.00 32.18 3.32
8 9 2.439104 GGATCGGCCTCCTCAAGCT 61.439 63.158 0.00 0.00 32.18 3.74
9 10 2.110006 GGATCGGCCTCCTCAAGC 59.890 66.667 0.00 0.00 32.18 4.01
10 11 2.812619 GGGGATCGGCCTCCTCAAG 61.813 68.421 10.70 0.00 35.69 3.02
11 12 2.768344 GGGGATCGGCCTCCTCAA 60.768 66.667 10.70 0.00 35.69 3.02
12 13 3.758133 GAGGGGATCGGCCTCCTCA 62.758 68.421 13.27 0.00 45.87 3.86
13 14 2.920384 GAGGGGATCGGCCTCCTC 60.920 72.222 10.70 6.90 42.84 3.71
27 28 2.983879 AATGCCAAGACCCCCGAGG 61.984 63.158 0.00 0.00 43.78 4.63
28 29 1.750399 CAATGCCAAGACCCCCGAG 60.750 63.158 0.00 0.00 0.00 4.63
29 30 2.075355 AACAATGCCAAGACCCCCGA 62.075 55.000 0.00 0.00 0.00 5.14
30 31 1.595093 GAACAATGCCAAGACCCCCG 61.595 60.000 0.00 0.00 0.00 5.73
31 32 1.595093 CGAACAATGCCAAGACCCCC 61.595 60.000 0.00 0.00 0.00 5.40
32 33 1.883021 CGAACAATGCCAAGACCCC 59.117 57.895 0.00 0.00 0.00 4.95
33 34 1.212751 GCGAACAATGCCAAGACCC 59.787 57.895 0.00 0.00 0.00 4.46
34 35 4.868195 GCGAACAATGCCAAGACC 57.132 55.556 0.00 0.00 0.00 3.85
52 53 0.734253 CAGTTCAAGACCCTCGCGAG 60.734 60.000 29.06 29.06 0.00 5.03
53 54 1.289066 CAGTTCAAGACCCTCGCGA 59.711 57.895 9.26 9.26 0.00 5.87
54 55 0.600255 AACAGTTCAAGACCCTCGCG 60.600 55.000 0.00 0.00 0.00 5.87
55 56 0.868406 CAACAGTTCAAGACCCTCGC 59.132 55.000 0.00 0.00 0.00 5.03
56 57 2.526304 TCAACAGTTCAAGACCCTCG 57.474 50.000 0.00 0.00 0.00 4.63
57 58 3.744660 ACATCAACAGTTCAAGACCCTC 58.255 45.455 0.00 0.00 0.00 4.30
58 59 3.744660 GACATCAACAGTTCAAGACCCT 58.255 45.455 0.00 0.00 0.00 4.34
59 60 2.480419 CGACATCAACAGTTCAAGACCC 59.520 50.000 0.00 0.00 0.00 4.46
60 61 3.390135 TCGACATCAACAGTTCAAGACC 58.610 45.455 0.00 0.00 0.00 3.85
61 62 5.198274 GTTTCGACATCAACAGTTCAAGAC 58.802 41.667 0.00 0.00 0.00 3.01
62 63 4.272504 GGTTTCGACATCAACAGTTCAAGA 59.727 41.667 0.56 0.00 0.00 3.02
63 64 4.527564 GGTTTCGACATCAACAGTTCAAG 58.472 43.478 0.56 0.00 0.00 3.02
64 65 3.001838 CGGTTTCGACATCAACAGTTCAA 59.998 43.478 0.56 0.00 39.00 2.69
65 66 2.542178 CGGTTTCGACATCAACAGTTCA 59.458 45.455 0.56 0.00 39.00 3.18
66 67 2.096417 CCGGTTTCGACATCAACAGTTC 60.096 50.000 0.00 0.00 39.00 3.01
67 68 1.871039 CCGGTTTCGACATCAACAGTT 59.129 47.619 0.00 0.00 39.00 3.16
68 69 1.508632 CCGGTTTCGACATCAACAGT 58.491 50.000 0.00 0.00 39.00 3.55
69 70 0.796312 CCCGGTTTCGACATCAACAG 59.204 55.000 0.00 0.00 39.00 3.16
70 71 1.231958 GCCCGGTTTCGACATCAACA 61.232 55.000 0.00 0.00 39.00 3.33
71 72 1.500396 GCCCGGTTTCGACATCAAC 59.500 57.895 0.00 0.00 39.00 3.18
72 73 1.673009 GGCCCGGTTTCGACATCAA 60.673 57.895 0.00 0.00 39.00 2.57
73 74 2.046700 GGCCCGGTTTCGACATCA 60.047 61.111 0.00 0.00 39.00 3.07
74 75 2.561549 TACGGCCCGGTTTCGACATC 62.562 60.000 8.57 0.00 39.00 3.06
75 76 2.169937 TTACGGCCCGGTTTCGACAT 62.170 55.000 8.57 0.00 39.00 3.06
76 77 2.865598 TTACGGCCCGGTTTCGACA 61.866 57.895 8.57 0.82 39.00 4.35
77 78 2.048316 TTACGGCCCGGTTTCGAC 60.048 61.111 8.57 0.00 39.00 4.20
78 79 2.048316 GTTACGGCCCGGTTTCGA 60.048 61.111 8.57 0.00 39.00 3.71
79 80 2.357275 TGTTACGGCCCGGTTTCG 60.357 61.111 8.57 3.53 0.00 3.46
80 81 2.036571 CCTGTTACGGCCCGGTTTC 61.037 63.158 8.57 0.00 0.00 2.78
81 82 2.032987 CCTGTTACGGCCCGGTTT 59.967 61.111 8.57 0.00 0.00 3.27
82 83 4.710167 GCCTGTTACGGCCCGGTT 62.710 66.667 8.57 0.00 44.41 4.44
89 90 1.876714 CATCGTCGGCCTGTTACGG 60.877 63.158 14.22 0.00 37.24 4.02
90 91 1.876714 CCATCGTCGGCCTGTTACG 60.877 63.158 0.00 5.80 37.96 3.18
91 92 0.527817 CTCCATCGTCGGCCTGTTAC 60.528 60.000 0.00 0.00 0.00 2.50
92 93 1.813859 CTCCATCGTCGGCCTGTTA 59.186 57.895 0.00 0.00 0.00 2.41
93 94 2.579201 CTCCATCGTCGGCCTGTT 59.421 61.111 0.00 0.00 0.00 3.16
94 95 4.148825 GCTCCATCGTCGGCCTGT 62.149 66.667 0.00 0.00 0.00 4.00
95 96 4.899239 GGCTCCATCGTCGGCCTG 62.899 72.222 0.00 0.00 41.20 4.85
99 100 4.129737 ACGTGGCTCCATCGTCGG 62.130 66.667 9.56 0.00 31.81 4.79
100 101 2.880879 CACGTGGCTCCATCGTCG 60.881 66.667 7.95 4.81 33.82 5.12
101 102 2.509336 CCACGTGGCTCCATCGTC 60.509 66.667 24.02 0.00 33.82 4.20
102 103 3.311110 ACCACGTGGCTCCATCGT 61.311 61.111 34.26 9.57 39.32 3.73
103 104 2.815211 CACCACGTGGCTCCATCG 60.815 66.667 34.26 8.61 39.32 3.84
123 124 4.711949 AGACTTGCCTGCCTGCGG 62.712 66.667 0.00 0.00 0.00 5.69
124 125 3.429141 CAGACTTGCCTGCCTGCG 61.429 66.667 0.00 0.00 0.00 5.18
125 126 2.833604 ATCCAGACTTGCCTGCCTGC 62.834 60.000 0.00 0.00 32.97 4.85
126 127 0.543277 TATCCAGACTTGCCTGCCTG 59.457 55.000 0.00 0.00 32.97 4.85
127 128 0.543749 GTATCCAGACTTGCCTGCCT 59.456 55.000 0.00 0.00 32.97 4.75
128 129 0.464554 GGTATCCAGACTTGCCTGCC 60.465 60.000 0.00 0.00 32.97 4.85
129 130 0.464554 GGGTATCCAGACTTGCCTGC 60.465 60.000 0.00 0.00 32.97 4.85
130 131 0.181350 GGGGTATCCAGACTTGCCTG 59.819 60.000 0.00 0.00 35.00 4.85
131 132 0.988678 GGGGGTATCCAGACTTGCCT 60.989 60.000 0.00 0.00 37.22 4.75
132 133 1.279025 TGGGGGTATCCAGACTTGCC 61.279 60.000 0.00 0.00 37.22 4.52
133 134 0.846693 ATGGGGGTATCCAGACTTGC 59.153 55.000 0.00 0.00 40.56 4.01
134 135 4.350816 TGAATATGGGGGTATCCAGACTTG 59.649 45.833 0.00 0.00 40.56 3.16
135 136 4.577096 TGAATATGGGGGTATCCAGACTT 58.423 43.478 0.00 0.00 40.56 3.01
136 137 4.228237 TGAATATGGGGGTATCCAGACT 57.772 45.455 0.00 0.00 40.56 3.24
137 138 6.415573 GTTATGAATATGGGGGTATCCAGAC 58.584 44.000 0.00 0.00 40.56 3.51
138 139 5.188948 CGTTATGAATATGGGGGTATCCAGA 59.811 44.000 0.00 0.00 40.56 3.86
139 140 5.428253 CGTTATGAATATGGGGGTATCCAG 58.572 45.833 0.00 0.00 40.56 3.86
140 141 4.323945 GCGTTATGAATATGGGGGTATCCA 60.324 45.833 0.00 0.00 41.60 3.41
141 142 4.196971 GCGTTATGAATATGGGGGTATCC 58.803 47.826 0.00 0.00 0.00 2.59
142 143 4.196971 GGCGTTATGAATATGGGGGTATC 58.803 47.826 0.00 0.00 0.00 2.24
143 144 3.589735 TGGCGTTATGAATATGGGGGTAT 59.410 43.478 0.00 0.00 0.00 2.73
144 145 2.980379 TGGCGTTATGAATATGGGGGTA 59.020 45.455 0.00 0.00 0.00 3.69
145 146 1.777878 TGGCGTTATGAATATGGGGGT 59.222 47.619 0.00 0.00 0.00 4.95
146 147 2.556622 GTTGGCGTTATGAATATGGGGG 59.443 50.000 0.00 0.00 0.00 5.40
147 148 3.218453 TGTTGGCGTTATGAATATGGGG 58.782 45.455 0.00 0.00 0.00 4.96
148 149 4.097135 TGTTGTTGGCGTTATGAATATGGG 59.903 41.667 0.00 0.00 0.00 4.00
149 150 5.242069 TGTTGTTGGCGTTATGAATATGG 57.758 39.130 0.00 0.00 0.00 2.74
150 151 6.089476 TGTTGTTGTTGGCGTTATGAATATG 58.911 36.000 0.00 0.00 0.00 1.78
151 152 6.260870 TGTTGTTGTTGGCGTTATGAATAT 57.739 33.333 0.00 0.00 0.00 1.28
152 153 5.690997 TGTTGTTGTTGGCGTTATGAATA 57.309 34.783 0.00 0.00 0.00 1.75
153 154 4.576216 TGTTGTTGTTGGCGTTATGAAT 57.424 36.364 0.00 0.00 0.00 2.57
154 155 4.277174 AGATGTTGTTGTTGGCGTTATGAA 59.723 37.500 0.00 0.00 0.00 2.57
155 156 3.818210 AGATGTTGTTGTTGGCGTTATGA 59.182 39.130 0.00 0.00 0.00 2.15
156 157 4.159377 AGATGTTGTTGTTGGCGTTATG 57.841 40.909 0.00 0.00 0.00 1.90
157 158 4.277174 TGAAGATGTTGTTGTTGGCGTTAT 59.723 37.500 0.00 0.00 0.00 1.89
158 159 3.628032 TGAAGATGTTGTTGTTGGCGTTA 59.372 39.130 0.00 0.00 0.00 3.18
159 160 2.425312 TGAAGATGTTGTTGTTGGCGTT 59.575 40.909 0.00 0.00 0.00 4.84
160 161 2.020720 TGAAGATGTTGTTGTTGGCGT 58.979 42.857 0.00 0.00 0.00 5.68
161 162 2.772568 TGAAGATGTTGTTGTTGGCG 57.227 45.000 0.00 0.00 0.00 5.69
162 163 5.953183 TGATATGAAGATGTTGTTGTTGGC 58.047 37.500 0.00 0.00 0.00 4.52
163 164 7.764331 TGATGATATGAAGATGTTGTTGTTGG 58.236 34.615 0.00 0.00 0.00 3.77
402 410 7.149973 TGCTTGAAATCCTCATCTTTTTGAAG 58.850 34.615 0.00 0.00 32.78 3.02
543 552 2.383855 CTCCACTCTTCTCCTCGGATT 58.616 52.381 0.00 0.00 0.00 3.01
552 561 3.527253 TCTCTCATCTCCTCCACTCTTCT 59.473 47.826 0.00 0.00 0.00 2.85
586 597 0.537653 GTTCTTCTTCCTCCCCCTCG 59.462 60.000 0.00 0.00 0.00 4.63
587 598 1.557371 CAGTTCTTCTTCCTCCCCCTC 59.443 57.143 0.00 0.00 0.00 4.30
588 599 1.132365 ACAGTTCTTCTTCCTCCCCCT 60.132 52.381 0.00 0.00 0.00 4.79
695 721 2.421739 GTCGCATCCTACCGCCAT 59.578 61.111 0.00 0.00 0.00 4.40
733 765 2.139323 TATCCACGTCACCTAGCAGT 57.861 50.000 0.00 0.00 0.00 4.40
741 773 4.357996 GGTAAGCTACTTATCCACGTCAC 58.642 47.826 0.00 0.00 0.00 3.67
771 803 0.113776 AGACAACCTACCGTCAGGGA 59.886 55.000 4.71 0.00 43.47 4.20
785 817 3.093814 TGCTGACGATAGGGTTAGACAA 58.906 45.455 0.00 0.00 43.77 3.18
801 833 3.953712 TTCTTACCGTCAAGATGCTGA 57.046 42.857 0.00 0.00 34.59 4.26
807 839 6.292923 TCAATCCTTTTTCTTACCGTCAAGA 58.707 36.000 0.00 0.00 32.71 3.02
809 842 6.945938 TTCAATCCTTTTTCTTACCGTCAA 57.054 33.333 0.00 0.00 0.00 3.18
862 896 2.343101 CCTTTCGCGTACCAATTCAGA 58.657 47.619 5.77 0.00 0.00 3.27
874 908 0.317519 GTGTTTTGACCCCTTTCGCG 60.318 55.000 0.00 0.00 0.00 5.87
881 915 3.559655 GCAGAATTTTGTGTTTTGACCCC 59.440 43.478 0.00 0.00 0.00 4.95
894 928 1.288752 CGCAACGGGGCAGAATTTT 59.711 52.632 1.53 0.00 0.00 1.82
934 968 4.148825 GCTGAGTCGGTCGCCCAT 62.149 66.667 0.00 0.00 0.00 4.00
1056 1095 1.805945 CTTCGAGTGGCCGTACAGC 60.806 63.158 0.00 0.00 0.00 4.40
1155 1194 2.603473 AGGGCTCGGTACAGCACA 60.603 61.111 9.86 0.00 46.24 4.57
1226 1274 1.125711 AACCGTAGCAAGAGGTGGGT 61.126 55.000 0.00 0.00 38.44 4.51
1230 1278 0.034896 CCACAACCGTAGCAAGAGGT 59.965 55.000 0.00 0.00 40.50 3.85
1233 1281 0.034337 GGACCACAACCGTAGCAAGA 59.966 55.000 0.00 0.00 0.00 3.02
1235 1283 1.071814 GGGACCACAACCGTAGCAA 59.928 57.895 0.00 0.00 0.00 3.91
1236 1284 2.745037 GGGACCACAACCGTAGCA 59.255 61.111 0.00 0.00 0.00 3.49
1255 1303 4.083862 GCGGTCCTCCTCGGCTTT 62.084 66.667 0.00 0.00 0.00 3.51
1324 1372 2.182858 GAGGGGGAGGTGGAGAAGGA 62.183 65.000 0.00 0.00 0.00 3.36
1349 1397 0.109039 GACGAGAGAGACTGGCAACC 60.109 60.000 0.00 0.00 0.00 3.77
1362 1410 3.321111 ACTGAAAAGTAAGGCAGACGAGA 59.679 43.478 0.00 0.00 32.86 4.04
1363 1411 3.654414 ACTGAAAAGTAAGGCAGACGAG 58.346 45.455 0.00 0.00 32.86 4.18
1431 1479 0.396811 GGCCCGGATAACAGTATGCT 59.603 55.000 0.73 0.00 42.53 3.79
1432 1480 0.396811 AGGCCCGGATAACAGTATGC 59.603 55.000 0.73 0.00 42.53 3.14
1433 1481 1.691976 TGAGGCCCGGATAACAGTATG 59.308 52.381 0.73 0.00 46.00 2.39
1434 1482 2.097110 TGAGGCCCGGATAACAGTAT 57.903 50.000 0.73 0.00 0.00 2.12
1435 1483 2.097110 ATGAGGCCCGGATAACAGTA 57.903 50.000 0.73 0.00 0.00 2.74
1436 1484 1.213296 AATGAGGCCCGGATAACAGT 58.787 50.000 0.73 0.00 0.00 3.55
1448 1496 5.450550 GGGATAGTAGCAAAACAAATGAGGC 60.451 44.000 0.00 0.00 0.00 4.70
1466 1518 6.833933 AGGCCAAACACTAAAATTAGGGATAG 59.166 38.462 5.01 0.00 36.24 2.08
1469 1521 5.005628 AGGCCAAACACTAAAATTAGGGA 57.994 39.130 5.01 0.00 36.24 4.20
1482 1534 3.318839 CAGTTGATTCTGAAGGCCAAACA 59.681 43.478 5.01 0.29 37.61 2.83
1493 1545 5.624344 AGTTGCTTGATCAGTTGATTCTG 57.376 39.130 0.00 0.00 34.37 3.02
1516 1568 9.593565 AACAATCTATCCATACATAGACAGAGA 57.406 33.333 0.00 0.00 38.04 3.10
1524 1576 8.527810 TGCATCGTAACAATCTATCCATACATA 58.472 33.333 0.00 0.00 0.00 2.29
1525 1577 7.386059 TGCATCGTAACAATCTATCCATACAT 58.614 34.615 0.00 0.00 0.00 2.29
1526 1578 6.754193 TGCATCGTAACAATCTATCCATACA 58.246 36.000 0.00 0.00 0.00 2.29
1527 1579 6.183360 GCTGCATCGTAACAATCTATCCATAC 60.183 42.308 0.00 0.00 0.00 2.39
1528 1580 5.869344 GCTGCATCGTAACAATCTATCCATA 59.131 40.000 0.00 0.00 0.00 2.74
1529 1581 4.692625 GCTGCATCGTAACAATCTATCCAT 59.307 41.667 0.00 0.00 0.00 3.41
1530 1582 4.058124 GCTGCATCGTAACAATCTATCCA 58.942 43.478 0.00 0.00 0.00 3.41
1531 1583 4.310769 AGCTGCATCGTAACAATCTATCC 58.689 43.478 1.02 0.00 0.00 2.59
1532 1584 5.914085 AAGCTGCATCGTAACAATCTATC 57.086 39.130 1.02 0.00 0.00 2.08
1533 1585 7.875041 AGATAAAGCTGCATCGTAACAATCTAT 59.125 33.333 1.02 0.00 0.00 1.98
1534 1586 7.210174 AGATAAAGCTGCATCGTAACAATCTA 58.790 34.615 1.02 0.00 0.00 1.98
1535 1587 6.051717 AGATAAAGCTGCATCGTAACAATCT 58.948 36.000 1.02 0.00 0.00 2.40
1536 1588 6.292389 AGATAAAGCTGCATCGTAACAATC 57.708 37.500 1.02 0.00 0.00 2.67
1537 1589 6.510157 CGAAGATAAAGCTGCATCGTAACAAT 60.510 38.462 1.02 0.00 0.00 2.71
1538 1590 5.220397 CGAAGATAAAGCTGCATCGTAACAA 60.220 40.000 1.02 0.00 0.00 2.83
1539 1591 4.267690 CGAAGATAAAGCTGCATCGTAACA 59.732 41.667 1.02 0.00 0.00 2.41
1540 1592 4.318121 CCGAAGATAAAGCTGCATCGTAAC 60.318 45.833 1.02 0.00 0.00 2.50
1541 1593 3.802139 CCGAAGATAAAGCTGCATCGTAA 59.198 43.478 1.02 0.00 0.00 3.18
1542 1594 3.381045 CCGAAGATAAAGCTGCATCGTA 58.619 45.455 1.02 0.00 0.00 3.43
1543 1595 2.205074 CCGAAGATAAAGCTGCATCGT 58.795 47.619 1.02 0.00 0.00 3.73
1544 1596 1.528586 CCCGAAGATAAAGCTGCATCG 59.471 52.381 1.02 0.00 0.00 3.84
1545 1597 2.838736 TCCCGAAGATAAAGCTGCATC 58.161 47.619 1.02 0.00 0.00 3.91
1546 1598 2.945668 GTTCCCGAAGATAAAGCTGCAT 59.054 45.455 1.02 0.00 0.00 3.96
1547 1599 2.290008 TGTTCCCGAAGATAAAGCTGCA 60.290 45.455 1.02 0.00 0.00 4.41
1548 1600 2.352960 CTGTTCCCGAAGATAAAGCTGC 59.647 50.000 0.00 0.00 0.00 5.25
1549 1601 2.352960 GCTGTTCCCGAAGATAAAGCTG 59.647 50.000 0.00 0.00 0.00 4.24
1550 1602 2.633488 GCTGTTCCCGAAGATAAAGCT 58.367 47.619 0.00 0.00 0.00 3.74
1551 1603 1.671328 GGCTGTTCCCGAAGATAAAGC 59.329 52.381 0.00 0.00 0.00 3.51
1552 1604 2.985896 TGGCTGTTCCCGAAGATAAAG 58.014 47.619 0.00 0.00 0.00 1.85
1553 1605 3.426787 TTGGCTGTTCCCGAAGATAAA 57.573 42.857 0.00 0.00 0.00 1.40
1554 1606 3.644966 ATTGGCTGTTCCCGAAGATAA 57.355 42.857 0.00 0.00 0.00 1.75
1555 1607 3.644966 AATTGGCTGTTCCCGAAGATA 57.355 42.857 0.00 0.00 0.00 1.98
1556 1608 2.514458 AATTGGCTGTTCCCGAAGAT 57.486 45.000 0.00 0.00 0.00 2.40
1557 1609 2.286365 AAATTGGCTGTTCCCGAAGA 57.714 45.000 0.00 0.00 0.00 2.87
1558 1610 4.718940 ATAAAATTGGCTGTTCCCGAAG 57.281 40.909 0.00 0.00 0.00 3.79
1559 1611 5.233988 CAAATAAAATTGGCTGTTCCCGAA 58.766 37.500 0.00 0.00 0.00 4.30
1560 1612 4.322349 CCAAATAAAATTGGCTGTTCCCGA 60.322 41.667 0.00 0.00 43.11 5.14
1561 1613 3.932089 CCAAATAAAATTGGCTGTTCCCG 59.068 43.478 0.00 0.00 43.11 5.14
1577 1629 1.481363 CATGTGCATGCCCACCAAATA 59.519 47.619 16.68 0.00 34.85 1.40
1592 1644 8.385111 GCAGATTTTAACATCCAAATTCATGTG 58.615 33.333 0.00 0.00 33.38 3.21
1603 1655 5.904362 AAGGTCTGCAGATTTTAACATCC 57.096 39.130 21.47 12.73 0.00 3.51
1620 1672 6.338937 ACGTATTCATTCACTCCTTAAGGTC 58.661 40.000 21.04 0.00 36.34 3.85
1636 1689 6.038936 TCAGCAGCTATAAGTGTACGTATTCA 59.961 38.462 0.00 0.00 0.00 2.57
1640 1693 6.387041 AATCAGCAGCTATAAGTGTACGTA 57.613 37.500 0.00 0.00 0.00 3.57
1641 1694 4.920640 ATCAGCAGCTATAAGTGTACGT 57.079 40.909 0.00 0.00 0.00 3.57
1642 1695 7.875316 ATAAATCAGCAGCTATAAGTGTACG 57.125 36.000 0.00 0.00 0.00 3.67
1643 1696 8.851416 CGTATAAATCAGCAGCTATAAGTGTAC 58.149 37.037 0.00 0.00 0.00 2.90
1665 1718 9.935241 AGCTTAGAATATTCATGATTGTCGTAT 57.065 29.630 17.56 0.00 0.00 3.06
1728 1781 6.615264 ATCATTTGACATGTTAGCTAGCAG 57.385 37.500 18.83 10.15 0.00 4.24
1729 1782 7.254898 GCTAATCATTTGACATGTTAGCTAGCA 60.255 37.037 18.83 13.00 40.29 3.49
1730 1783 7.074502 GCTAATCATTTGACATGTTAGCTAGC 58.925 38.462 6.62 6.62 40.29 3.42
1731 1784 7.308229 GGGCTAATCATTTGACATGTTAGCTAG 60.308 40.741 17.09 5.93 42.06 3.42
1732 1785 6.486657 GGGCTAATCATTTGACATGTTAGCTA 59.513 38.462 17.09 0.00 42.06 3.32
1733 1786 5.300286 GGGCTAATCATTTGACATGTTAGCT 59.700 40.000 17.09 0.00 42.06 3.32
1734 1787 5.300286 AGGGCTAATCATTTGACATGTTAGC 59.700 40.000 11.69 11.69 41.81 3.09
1757 1811 8.892723 TCATTTGAATACCACTATAAAGCACAG 58.107 33.333 0.00 0.00 0.00 3.66
1891 1946 3.751698 ACTAGTGCTAAAAAGGAAAGGCG 59.248 43.478 0.00 0.00 0.00 5.52
1936 1992 1.873591 GCATATCAACCCCGTGCTAAG 59.126 52.381 0.00 0.00 33.25 2.18
1945 2001 6.463995 TTCAATTTGGTAGCATATCAACCC 57.536 37.500 0.00 0.00 42.28 4.11
2112 2170 3.285484 AGAAGACCATGCAGCATTAAGG 58.715 45.455 4.69 6.94 0.00 2.69
2368 2426 7.875327 AGCTGTAACCTTTTTCAAGAACTAA 57.125 32.000 0.00 0.00 30.57 2.24
2410 2468 5.940470 AGCAGGAAGTAAAGTAAACATGGAG 59.060 40.000 0.00 0.00 0.00 3.86
2480 2538 7.446013 TCAAGTTCGCTATTTTTAGGAAAAGGA 59.554 33.333 0.00 0.00 38.09 3.36
2508 2566 8.604035 TCAGTTTATGCTTATCGATTTGACTTC 58.396 33.333 1.71 0.00 0.00 3.01
2760 2818 9.784531 AAATTAAGTACATCCTGGTCATGATAG 57.215 33.333 0.00 0.51 0.00 2.08
2963 3021 6.116126 GGCATAGACATATAATCCCTCCAAC 58.884 44.000 0.00 0.00 0.00 3.77
3001 3059 0.959553 CATGAGAATGCCCCAGATGC 59.040 55.000 0.00 0.00 0.00 3.91
3097 3155 9.936759 TTAGACAACAGTACATAATTGATCACA 57.063 29.630 0.00 0.00 0.00 3.58
3191 3256 8.579850 AATTGACATGTTTGACTATACCACAT 57.420 30.769 0.00 0.00 0.00 3.21
3283 3349 5.003804 TCTGGTCTTGATAAAAACAGAGGC 58.996 41.667 0.00 0.00 0.00 4.70
3506 3572 5.655090 TGAGAATCTTATTCGGTACTCCACA 59.345 40.000 0.00 0.00 34.92 4.17
3561 3627 1.271597 GGTGGAGTTCCTCATGCACTT 60.272 52.381 0.00 0.00 36.82 3.16
3621 3687 0.036952 ATCAACTGGCAGTGTCCTCG 60.037 55.000 22.83 6.04 0.00 4.63
3671 3737 4.223659 CCTTCGTGTTGGTTATTTTTCCG 58.776 43.478 0.00 0.00 0.00 4.30
3708 3774 5.242393 CACTGTCAAATGGAAACTGGAGAAT 59.758 40.000 0.00 0.00 0.00 2.40
3733 3799 2.187073 GCATGTAAGGCTGCAGCTT 58.813 52.632 35.82 28.28 42.67 3.74
3828 3894 2.885894 CCTCTATTAGTGTCCCTCGGTC 59.114 54.545 0.00 0.00 0.00 4.79
3831 3897 3.552875 TCACCTCTATTAGTGTCCCTCG 58.447 50.000 0.00 0.00 35.45 4.63
3878 3944 1.668101 GCCGAACGAGTGGAGATCCT 61.668 60.000 0.00 0.00 36.82 3.24
3879 3945 1.227002 GCCGAACGAGTGGAGATCC 60.227 63.158 0.00 0.00 0.00 3.36
3880 3946 1.227002 GGCCGAACGAGTGGAGATC 60.227 63.158 0.00 0.00 0.00 2.75
3881 3947 2.722201 GGGCCGAACGAGTGGAGAT 61.722 63.158 0.00 0.00 0.00 2.75
3882 3948 3.379445 GGGCCGAACGAGTGGAGA 61.379 66.667 0.00 0.00 0.00 3.71
3883 3949 4.452733 GGGGCCGAACGAGTGGAG 62.453 72.222 0.00 0.00 0.00 3.86
3908 3974 4.789123 AAAATAGCGCCGGCGGGT 62.789 61.111 45.81 33.10 46.35 5.28
3909 3975 4.250431 CAAAATAGCGCCGGCGGG 62.250 66.667 45.81 23.82 46.35 6.13
3910 3976 4.250431 CCAAAATAGCGCCGGCGG 62.250 66.667 45.81 28.60 46.35 6.13
3911 3977 4.905193 GCCAAAATAGCGCCGGCG 62.905 66.667 43.13 43.13 46.35 6.46
3912 3978 4.569023 GGCCAAAATAGCGCCGGC 62.569 66.667 19.07 19.07 42.21 6.13
3913 3979 3.899700 GGGCCAAAATAGCGCCGG 61.900 66.667 4.39 0.00 43.99 6.13
3914 3980 1.944234 AAAGGGCCAAAATAGCGCCG 61.944 55.000 6.18 0.00 43.99 6.46
3915 3981 0.460109 CAAAGGGCCAAAATAGCGCC 60.460 55.000 6.18 0.00 43.71 6.53
3916 3982 0.460109 CCAAAGGGCCAAAATAGCGC 60.460 55.000 6.18 0.00 43.05 5.92
3917 3983 3.739077 CCAAAGGGCCAAAATAGCG 57.261 52.632 6.18 0.00 0.00 4.26
3929 3995 3.513768 AAAAAGCGCCGGCCAAAGG 62.514 57.895 23.46 7.50 41.24 3.11
3930 3996 2.021584 GAAAAAGCGCCGGCCAAAG 61.022 57.895 23.46 7.95 41.24 2.77
3931 3997 2.028337 GAAAAAGCGCCGGCCAAA 59.972 55.556 23.46 0.00 41.24 3.28
3932 3998 4.335584 CGAAAAAGCGCCGGCCAA 62.336 61.111 23.46 0.00 41.24 4.52
3938 4004 4.419939 CAGGGCCGAAAAAGCGCC 62.420 66.667 2.29 0.00 43.71 6.53
3939 4005 4.419939 CCAGGGCCGAAAAAGCGC 62.420 66.667 0.00 0.00 43.05 5.92
3940 4006 3.747976 CCCAGGGCCGAAAAAGCG 61.748 66.667 0.00 0.00 0.00 4.68
3941 4007 2.282887 TCCCAGGGCCGAAAAAGC 60.283 61.111 0.00 0.00 0.00 3.51
3942 4008 2.343426 GCTCCCAGGGCCGAAAAAG 61.343 63.158 0.00 0.00 0.00 2.27
3943 4009 2.282887 GCTCCCAGGGCCGAAAAA 60.283 61.111 0.00 0.00 0.00 1.94
3944 4010 4.715523 CGCTCCCAGGGCCGAAAA 62.716 66.667 11.81 0.00 0.00 2.29
3949 4015 2.524394 TAGATCGCTCCCAGGGCC 60.524 66.667 0.00 0.00 0.00 5.80
3950 4016 1.403687 AACTAGATCGCTCCCAGGGC 61.404 60.000 0.00 0.00 0.00 5.19
3951 4017 0.676736 GAACTAGATCGCTCCCAGGG 59.323 60.000 0.00 0.00 0.00 4.45
3952 4018 0.676736 GGAACTAGATCGCTCCCAGG 59.323 60.000 0.00 0.00 0.00 4.45
3953 4019 0.676736 GGGAACTAGATCGCTCCCAG 59.323 60.000 15.56 0.00 46.00 4.45
3954 4020 2.822215 GGGAACTAGATCGCTCCCA 58.178 57.895 15.56 0.00 46.00 4.37
3955 4021 0.676736 CTGGGAACTAGATCGCTCCC 59.323 60.000 16.33 14.25 46.77 4.30
3956 4022 0.032815 GCTGGGAACTAGATCGCTCC 59.967 60.000 16.33 3.29 33.72 4.70
3957 4023 0.032815 GGCTGGGAACTAGATCGCTC 59.967 60.000 16.33 9.13 33.72 5.03
3958 4024 0.687757 TGGCTGGGAACTAGATCGCT 60.688 55.000 16.33 0.00 33.72 4.93
3959 4025 0.530870 GTGGCTGGGAACTAGATCGC 60.531 60.000 9.78 9.78 0.00 4.58
3960 4026 0.249073 CGTGGCTGGGAACTAGATCG 60.249 60.000 0.00 0.00 0.00 3.69
3961 4027 0.530870 GCGTGGCTGGGAACTAGATC 60.531 60.000 0.00 0.00 0.00 2.75
3962 4028 1.522569 GCGTGGCTGGGAACTAGAT 59.477 57.895 0.00 0.00 0.00 1.98
3963 4029 2.656069 GGCGTGGCTGGGAACTAGA 61.656 63.158 0.00 0.00 0.00 2.43
3964 4030 2.125106 GGCGTGGCTGGGAACTAG 60.125 66.667 0.00 0.00 0.00 2.57
3965 4031 3.712907 GGGCGTGGCTGGGAACTA 61.713 66.667 0.00 0.00 0.00 2.24
3988 4054 1.755393 ATATCGTCTTGGGGCCGACC 61.755 60.000 0.00 0.00 39.11 4.79
3989 4055 0.963962 TATATCGTCTTGGGGCCGAC 59.036 55.000 0.00 0.00 32.86 4.79
3990 4056 1.707106 TTATATCGTCTTGGGGCCGA 58.293 50.000 0.00 0.00 34.79 5.54
3991 4057 2.536761 TTTATATCGTCTTGGGGCCG 57.463 50.000 0.00 0.00 0.00 6.13
3992 4058 4.394729 TGAATTTATATCGTCTTGGGGCC 58.605 43.478 0.00 0.00 0.00 5.80
3993 4059 6.183360 TGTTTGAATTTATATCGTCTTGGGGC 60.183 38.462 0.00 0.00 0.00 5.80
3994 4060 7.328277 TGTTTGAATTTATATCGTCTTGGGG 57.672 36.000 0.00 0.00 0.00 4.96
3995 4061 8.620416 TCATGTTTGAATTTATATCGTCTTGGG 58.380 33.333 0.00 0.00 0.00 4.12
3996 4062 9.438291 GTCATGTTTGAATTTATATCGTCTTGG 57.562 33.333 0.00 0.00 32.48 3.61
3997 4063 9.986833 TGTCATGTTTGAATTTATATCGTCTTG 57.013 29.630 0.00 0.00 32.48 3.02
4004 4070 9.748708 CGGGAAATGTCATGTTTGAATTTATAT 57.251 29.630 0.00 0.00 32.48 0.86
4005 4071 7.704472 GCGGGAAATGTCATGTTTGAATTTATA 59.296 33.333 0.00 0.00 32.48 0.98
4006 4072 6.534793 GCGGGAAATGTCATGTTTGAATTTAT 59.465 34.615 0.00 0.00 32.48 1.40
4007 4073 5.866633 GCGGGAAATGTCATGTTTGAATTTA 59.133 36.000 0.00 0.00 32.48 1.40
4008 4074 4.690280 GCGGGAAATGTCATGTTTGAATTT 59.310 37.500 0.00 0.00 32.48 1.82
4009 4075 4.021192 AGCGGGAAATGTCATGTTTGAATT 60.021 37.500 0.00 0.00 32.48 2.17
4010 4076 3.511146 AGCGGGAAATGTCATGTTTGAAT 59.489 39.130 0.00 0.00 32.48 2.57
4011 4077 2.890311 AGCGGGAAATGTCATGTTTGAA 59.110 40.909 0.00 0.00 32.48 2.69
4012 4078 2.513753 AGCGGGAAATGTCATGTTTGA 58.486 42.857 0.00 0.00 0.00 2.69
4013 4079 3.427503 GGTAGCGGGAAATGTCATGTTTG 60.428 47.826 0.00 0.00 0.00 2.93
4014 4080 2.752903 GGTAGCGGGAAATGTCATGTTT 59.247 45.455 0.00 0.00 0.00 2.83
4015 4081 2.365582 GGTAGCGGGAAATGTCATGTT 58.634 47.619 0.00 0.00 0.00 2.71
4016 4082 1.408266 GGGTAGCGGGAAATGTCATGT 60.408 52.381 0.00 0.00 0.00 3.21
4017 4083 1.308998 GGGTAGCGGGAAATGTCATG 58.691 55.000 0.00 0.00 0.00 3.07
4018 4084 0.916086 TGGGTAGCGGGAAATGTCAT 59.084 50.000 0.00 0.00 0.00 3.06
4019 4085 0.693622 TTGGGTAGCGGGAAATGTCA 59.306 50.000 0.00 0.00 0.00 3.58
4020 4086 1.065709 TCTTGGGTAGCGGGAAATGTC 60.066 52.381 0.00 0.00 0.00 3.06
4021 4087 0.988832 TCTTGGGTAGCGGGAAATGT 59.011 50.000 0.00 0.00 0.00 2.71
4022 4088 2.122783 TTCTTGGGTAGCGGGAAATG 57.877 50.000 0.00 0.00 0.00 2.32
4023 4089 2.443416 GTTTCTTGGGTAGCGGGAAAT 58.557 47.619 8.16 0.00 0.00 2.17
4024 4090 1.878948 CGTTTCTTGGGTAGCGGGAAA 60.879 52.381 0.00 2.88 0.00 3.13
4025 4091 0.320946 CGTTTCTTGGGTAGCGGGAA 60.321 55.000 0.00 0.00 0.00 3.97
4026 4092 1.294138 CGTTTCTTGGGTAGCGGGA 59.706 57.895 0.00 0.00 0.00 5.14
4027 4093 2.396157 GCGTTTCTTGGGTAGCGGG 61.396 63.158 0.00 0.00 0.00 6.13
4028 4094 2.396157 GGCGTTTCTTGGGTAGCGG 61.396 63.158 0.00 0.00 0.00 5.52
4029 4095 1.669760 TGGCGTTTCTTGGGTAGCG 60.670 57.895 0.00 0.00 0.00 4.26
4030 4096 0.887387 TGTGGCGTTTCTTGGGTAGC 60.887 55.000 0.00 0.00 0.00 3.58
4031 4097 1.535462 CTTGTGGCGTTTCTTGGGTAG 59.465 52.381 0.00 0.00 0.00 3.18
4032 4098 1.134037 ACTTGTGGCGTTTCTTGGGTA 60.134 47.619 0.00 0.00 0.00 3.69
4033 4099 0.395173 ACTTGTGGCGTTTCTTGGGT 60.395 50.000 0.00 0.00 0.00 4.51
4034 4100 0.310854 GACTTGTGGCGTTTCTTGGG 59.689 55.000 0.00 0.00 0.00 4.12
4035 4101 0.310854 GGACTTGTGGCGTTTCTTGG 59.689 55.000 0.00 0.00 0.00 3.61
4036 4102 0.041312 CGGACTTGTGGCGTTTCTTG 60.041 55.000 0.00 0.00 0.00 3.02
4037 4103 1.164041 CCGGACTTGTGGCGTTTCTT 61.164 55.000 0.00 0.00 0.00 2.52
4038 4104 1.597027 CCGGACTTGTGGCGTTTCT 60.597 57.895 0.00 0.00 0.00 2.52
4039 4105 2.943653 CCGGACTTGTGGCGTTTC 59.056 61.111 0.00 0.00 0.00 2.78
4040 4106 3.284449 GCCGGACTTGTGGCGTTT 61.284 61.111 5.05 0.00 42.22 3.60
4045 4111 1.811266 CTGATCGCCGGACTTGTGG 60.811 63.158 5.05 0.00 0.00 4.17
4046 4112 2.456119 GCTGATCGCCGGACTTGTG 61.456 63.158 5.05 0.00 0.00 3.33
4047 4113 2.125512 GCTGATCGCCGGACTTGT 60.126 61.111 5.05 0.00 0.00 3.16
4048 4114 3.257561 CGCTGATCGCCGGACTTG 61.258 66.667 5.05 0.00 34.21 3.16
4049 4115 4.514577 CCGCTGATCGCCGGACTT 62.515 66.667 16.33 0.00 35.30 3.01
4055 4121 4.221422 TGGTAGCCGCTGATCGCC 62.221 66.667 2.16 0.00 36.73 5.54
4056 4122 2.962253 GTGGTAGCCGCTGATCGC 60.962 66.667 2.16 0.23 36.73 4.58
4057 4123 0.313987 TATGTGGTAGCCGCTGATCG 59.686 55.000 2.16 0.00 34.70 3.69
4058 4124 1.341531 ACTATGTGGTAGCCGCTGATC 59.658 52.381 2.16 0.00 34.70 2.92
4059 4125 1.414158 ACTATGTGGTAGCCGCTGAT 58.586 50.000 2.16 0.00 34.70 2.90
4060 4126 1.136305 GAACTATGTGGTAGCCGCTGA 59.864 52.381 2.16 0.00 34.70 4.26
4061 4127 1.134818 TGAACTATGTGGTAGCCGCTG 60.135 52.381 2.16 0.00 34.70 5.18
4062 4128 1.134788 GTGAACTATGTGGTAGCCGCT 60.135 52.381 0.00 0.00 34.70 5.52
4063 4129 1.287425 GTGAACTATGTGGTAGCCGC 58.713 55.000 0.00 0.00 33.47 6.53
4064 4130 1.206132 TGGTGAACTATGTGGTAGCCG 59.794 52.381 0.00 0.00 33.47 5.52
4065 4131 3.206150 CATGGTGAACTATGTGGTAGCC 58.794 50.000 0.00 0.00 33.47 3.93
4066 4132 2.614057 GCATGGTGAACTATGTGGTAGC 59.386 50.000 8.36 0.00 37.20 3.58
4067 4133 3.206150 GGCATGGTGAACTATGTGGTAG 58.794 50.000 8.36 0.00 37.20 3.18
4068 4134 2.573915 TGGCATGGTGAACTATGTGGTA 59.426 45.455 8.36 0.00 37.20 3.25
4069 4135 1.354031 TGGCATGGTGAACTATGTGGT 59.646 47.619 8.36 0.00 37.20 4.16
4070 4136 1.745087 GTGGCATGGTGAACTATGTGG 59.255 52.381 8.36 0.00 37.20 4.17
4071 4137 2.421073 CTGTGGCATGGTGAACTATGTG 59.579 50.000 8.36 0.00 37.20 3.21
4072 4138 2.040278 ACTGTGGCATGGTGAACTATGT 59.960 45.455 8.36 0.00 37.20 2.29
4073 4139 2.715046 ACTGTGGCATGGTGAACTATG 58.285 47.619 2.65 2.65 37.81 2.23
4074 4140 3.347216 GAACTGTGGCATGGTGAACTAT 58.653 45.455 0.00 0.00 0.00 2.12
4075 4141 2.778299 GAACTGTGGCATGGTGAACTA 58.222 47.619 0.00 0.00 0.00 2.24
4076 4142 1.609208 GAACTGTGGCATGGTGAACT 58.391 50.000 0.00 0.00 0.00 3.01
4077 4143 0.238289 CGAACTGTGGCATGGTGAAC 59.762 55.000 0.00 0.00 0.00 3.18
4078 4144 0.888736 CCGAACTGTGGCATGGTGAA 60.889 55.000 0.00 0.00 0.00 3.18
4079 4145 1.302431 CCGAACTGTGGCATGGTGA 60.302 57.895 0.00 0.00 0.00 4.02
4080 4146 3.266964 CCGAACTGTGGCATGGTG 58.733 61.111 0.00 0.00 0.00 4.17
4087 4153 0.652592 GATTGATCGCCGAACTGTGG 59.347 55.000 0.00 0.00 0.00 4.17
4088 4154 1.061131 GTGATTGATCGCCGAACTGTG 59.939 52.381 0.00 0.00 0.00 3.66
4089 4155 1.066858 AGTGATTGATCGCCGAACTGT 60.067 47.619 0.00 0.00 38.03 3.55
4090 4156 1.590238 GAGTGATTGATCGCCGAACTG 59.410 52.381 0.00 0.00 38.03 3.16
4091 4157 1.204704 TGAGTGATTGATCGCCGAACT 59.795 47.619 0.00 0.00 38.03 3.01
4092 4158 1.640428 TGAGTGATTGATCGCCGAAC 58.360 50.000 0.00 0.00 38.03 3.95
4093 4159 2.378445 TTGAGTGATTGATCGCCGAA 57.622 45.000 0.00 0.00 38.03 4.30
4094 4160 2.378445 TTTGAGTGATTGATCGCCGA 57.622 45.000 0.00 0.00 38.03 5.54
4095 4161 2.416547 ACTTTTGAGTGATTGATCGCCG 59.583 45.455 1.14 0.00 38.03 6.46
4096 4162 4.406943 GAACTTTTGAGTGATTGATCGCC 58.593 43.478 1.14 0.00 38.03 5.54
4097 4163 4.084507 CGAACTTTTGAGTGATTGATCGC 58.915 43.478 0.00 0.00 37.57 4.58
4098 4164 4.641954 CCGAACTTTTGAGTGATTGATCG 58.358 43.478 0.00 0.00 0.00 3.69
4099 4165 4.406943 GCCGAACTTTTGAGTGATTGATC 58.593 43.478 0.00 0.00 0.00 2.92
4100 4166 3.120199 CGCCGAACTTTTGAGTGATTGAT 60.120 43.478 0.00 0.00 0.00 2.57
4101 4167 2.223144 CGCCGAACTTTTGAGTGATTGA 59.777 45.455 0.00 0.00 0.00 2.57
4102 4168 2.032030 ACGCCGAACTTTTGAGTGATTG 60.032 45.455 0.00 0.00 0.00 2.67
4103 4169 2.218603 ACGCCGAACTTTTGAGTGATT 58.781 42.857 0.00 0.00 0.00 2.57
4104 4170 1.878953 ACGCCGAACTTTTGAGTGAT 58.121 45.000 0.00 0.00 0.00 3.06
4105 4171 1.595794 GAACGCCGAACTTTTGAGTGA 59.404 47.619 0.00 0.00 0.00 3.41
4106 4172 1.329292 TGAACGCCGAACTTTTGAGTG 59.671 47.619 0.00 0.00 0.00 3.51
4107 4173 1.658994 TGAACGCCGAACTTTTGAGT 58.341 45.000 0.00 0.00 0.00 3.41
4108 4174 2.748461 TTGAACGCCGAACTTTTGAG 57.252 45.000 0.00 0.00 0.00 3.02
4109 4175 3.430931 CTTTTGAACGCCGAACTTTTGA 58.569 40.909 0.00 0.00 0.00 2.69
4110 4176 2.533942 CCTTTTGAACGCCGAACTTTTG 59.466 45.455 0.00 0.00 0.00 2.44
4111 4177 2.424246 TCCTTTTGAACGCCGAACTTTT 59.576 40.909 0.00 0.00 0.00 2.27
4112 4178 2.018515 TCCTTTTGAACGCCGAACTTT 58.981 42.857 0.00 0.00 0.00 2.66
4113 4179 1.670791 TCCTTTTGAACGCCGAACTT 58.329 45.000 0.00 0.00 0.00 2.66
4114 4180 1.670791 TTCCTTTTGAACGCCGAACT 58.329 45.000 0.00 0.00 0.00 3.01
4115 4181 2.032426 TCTTTCCTTTTGAACGCCGAAC 59.968 45.455 0.00 0.00 31.05 3.95
4116 4182 2.032426 GTCTTTCCTTTTGAACGCCGAA 59.968 45.455 0.00 0.00 31.05 4.30
4117 4183 1.600485 GTCTTTCCTTTTGAACGCCGA 59.400 47.619 0.00 0.00 31.05 5.54
4118 4184 1.659211 CGTCTTTCCTTTTGAACGCCG 60.659 52.381 0.00 0.00 31.05 6.46
4119 4185 1.924629 GCGTCTTTCCTTTTGAACGCC 60.925 52.381 6.43 0.00 39.01 5.68
4120 4186 1.395670 GCGTCTTTCCTTTTGAACGC 58.604 50.000 1.78 1.78 38.33 4.84
4121 4187 1.004292 ACGCGTCTTTCCTTTTGAACG 60.004 47.619 5.58 0.00 31.05 3.95
4122 4188 2.750301 ACGCGTCTTTCCTTTTGAAC 57.250 45.000 5.58 0.00 31.05 3.18
4123 4189 2.803956 CCTACGCGTCTTTCCTTTTGAA 59.196 45.455 18.63 0.00 0.00 2.69
4124 4190 2.409975 CCTACGCGTCTTTCCTTTTGA 58.590 47.619 18.63 0.00 0.00 2.69
4125 4191 1.136057 GCCTACGCGTCTTTCCTTTTG 60.136 52.381 18.63 0.00 0.00 2.44
4126 4192 1.154197 GCCTACGCGTCTTTCCTTTT 58.846 50.000 18.63 0.00 0.00 2.27
4127 4193 0.034337 TGCCTACGCGTCTTTCCTTT 59.966 50.000 18.63 0.00 38.08 3.11
4128 4194 0.034337 TTGCCTACGCGTCTTTCCTT 59.966 50.000 18.63 0.00 38.08 3.36
4129 4195 0.249398 ATTGCCTACGCGTCTTTCCT 59.751 50.000 18.63 0.00 38.08 3.36
4130 4196 0.373716 CATTGCCTACGCGTCTTTCC 59.626 55.000 18.63 1.23 38.08 3.13
4131 4197 0.247695 GCATTGCCTACGCGTCTTTC 60.248 55.000 18.63 4.20 38.08 2.62
4132 4198 0.953471 TGCATTGCCTACGCGTCTTT 60.953 50.000 18.63 0.00 38.08 2.52
4133 4199 0.744414 ATGCATTGCCTACGCGTCTT 60.744 50.000 18.63 0.00 38.08 3.01
4134 4200 1.153369 ATGCATTGCCTACGCGTCT 60.153 52.632 18.63 0.00 38.08 4.18
4135 4201 1.276844 GATGCATTGCCTACGCGTC 59.723 57.895 18.63 1.04 38.08 5.19
4136 4202 1.024046 TTGATGCATTGCCTACGCGT 61.024 50.000 19.17 19.17 38.08 6.01
4137 4203 0.098552 TTTGATGCATTGCCTACGCG 59.901 50.000 3.53 3.53 38.08 6.01
4138 4204 1.548986 GTTTGATGCATTGCCTACGC 58.451 50.000 6.12 0.00 0.00 4.42
4139 4205 1.130373 ACGTTTGATGCATTGCCTACG 59.870 47.619 6.12 9.59 0.00 3.51
4140 4206 2.785679 GACGTTTGATGCATTGCCTAC 58.214 47.619 6.12 0.00 0.00 3.18
4141 4207 1.396648 CGACGTTTGATGCATTGCCTA 59.603 47.619 6.12 0.00 0.00 3.93
4142 4208 0.168788 CGACGTTTGATGCATTGCCT 59.831 50.000 6.12 0.00 0.00 4.75
4143 4209 0.798009 CCGACGTTTGATGCATTGCC 60.798 55.000 6.12 0.00 0.00 4.52
4144 4210 1.405469 GCCGACGTTTGATGCATTGC 61.405 55.000 0.00 0.46 0.00 3.56
4145 4211 1.127571 CGCCGACGTTTGATGCATTG 61.128 55.000 0.00 0.00 33.53 2.82
4146 4212 1.134487 CGCCGACGTTTGATGCATT 59.866 52.632 0.00 0.00 33.53 3.56
4147 4213 2.784596 CGCCGACGTTTGATGCAT 59.215 55.556 0.00 0.00 33.53 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.