Multiple sequence alignment - TraesCS6B01G285600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G285600 chr6B 100.000 6192 0 0 1 6192 515015590 515021781 0.000000e+00 11435.0
1 TraesCS6B01G285600 chr6B 100.000 38 0 0 4498 4535 515020124 515020087 3.100000e-08 71.3
2 TraesCS6B01G285600 chr6A 94.726 1858 55 15 801 2628 448357712 448355868 0.000000e+00 2848.0
3 TraesCS6B01G285600 chr6A 94.654 636 24 4 4561 5188 448353839 448353206 0.000000e+00 977.0
4 TraesCS6B01G285600 chr6A 93.109 624 27 7 3856 4479 448354448 448353841 0.000000e+00 900.0
5 TraesCS6B01G285600 chr6A 93.858 521 30 2 2642 3161 448355730 448355211 0.000000e+00 784.0
6 TraesCS6B01G285600 chr6A 85.050 602 43 23 5174 5768 448353117 448352556 2.500000e-158 569.0
7 TraesCS6B01G285600 chr6A 89.726 438 20 10 342 772 448358118 448357699 2.540000e-148 536.0
8 TraesCS6B01G285600 chr6A 95.254 295 10 3 3544 3838 448354728 448354438 1.220000e-126 464.0
9 TraesCS6B01G285600 chr6A 82.599 431 40 23 5768 6187 448352502 448352096 1.280000e-91 348.0
10 TraesCS6B01G285600 chr6A 96.172 209 8 0 3333 3541 448355052 448354844 5.940000e-90 342.0
11 TraesCS6B01G285600 chr6A 94.286 140 8 0 3153 3292 448355185 448355046 1.350000e-51 215.0
12 TraesCS6B01G285600 chr6D 94.896 1783 48 19 795 2552 311589137 311587373 0.000000e+00 2748.0
13 TraesCS6B01G285600 chr6D 92.205 1129 62 8 4561 5668 311584992 311583869 0.000000e+00 1574.0
14 TraesCS6B01G285600 chr6D 91.432 957 54 15 3544 4479 311585943 311584994 0.000000e+00 1288.0
15 TraesCS6B01G285600 chr6D 84.167 720 69 25 64 778 311589797 311589118 0.000000e+00 656.0
16 TraesCS6B01G285600 chr6D 91.429 175 9 2 3373 3541 311586228 311586054 1.040000e-57 235.0
17 TraesCS6B01G285600 chr6D 92.683 123 8 1 6066 6188 311583031 311582910 6.380000e-40 176.0
18 TraesCS6B01G285600 chr6D 94.505 91 5 0 3153 3243 311586442 311586352 2.330000e-29 141.0
19 TraesCS6B01G285600 chr6D 94.872 78 4 0 5918 5995 311583604 311583527 8.430000e-24 122.0
20 TraesCS6B01G285600 chr6D 97.436 39 1 0 5688 5726 311583869 311583831 4.010000e-07 67.6
21 TraesCS6B01G285600 chr6D 97.143 35 1 0 3334 3368 311586351 311586317 6.700000e-05 60.2
22 TraesCS6B01G285600 chr7B 88.469 529 55 6 1251 1773 577279594 577280122 8.760000e-178 634.0
23 TraesCS6B01G285600 chr7B 88.447 528 53 8 1251 1771 577256369 577256895 1.130000e-176 630.0
24 TraesCS6B01G285600 chr7B 84.270 89 4 6 4476 4561 385504302 385504221 1.850000e-10 78.7
25 TraesCS6B01G285600 chr7B 92.000 50 3 1 4478 4526 385504223 385504272 1.110000e-07 69.4
26 TraesCS6B01G285600 chr2B 94.595 37 2 0 14 50 531119786 531119750 2.410000e-04 58.4
27 TraesCS6B01G285600 chr2B 100.000 28 0 0 4516 4543 105412054 105412027 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G285600 chr6B 515015590 515021781 6191 False 11435.00 11435 100.0000 1 6192 1 chr6B.!!$F1 6191
1 TraesCS6B01G285600 chr6A 448352096 448358118 6022 True 798.30 2848 91.9434 342 6187 10 chr6A.!!$R1 5845
2 TraesCS6B01G285600 chr6D 311582910 311589797 6887 True 706.78 2748 93.0768 64 6188 10 chr6D.!!$R1 6124
3 TraesCS6B01G285600 chr7B 577279594 577280122 528 False 634.00 634 88.4690 1251 1773 1 chr7B.!!$F3 522
4 TraesCS6B01G285600 chr7B 577256369 577256895 526 False 630.00 630 88.4470 1251 1771 1 chr7B.!!$F2 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
474 475 0.100503 ACGCCAAAGCAACAACAGTC 59.899 50.0 0.00 0.0 39.83 3.51 F
476 477 0.249447 GCCAAAGCAACAACAGTCCC 60.249 55.0 0.00 0.0 39.53 4.46 F
2392 2452 0.237235 GTGATTCCTCGCGTTTGCAA 59.763 50.0 5.77 0.0 42.97 4.08 F
3624 4254 0.321122 GGGGCCGCATGAGAGATAAG 60.321 60.0 16.21 0.0 0.00 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2237 2297 0.401395 TCTTGGGTGAAGGTGGAGGT 60.401 55.0 0.0 0.0 31.85 3.85 R
2458 2518 0.546122 AGGCTGCATTTCGGATACCA 59.454 50.0 0.5 0.0 0.00 3.25 R
3858 4493 0.451783 GCCCACAAATCAGTTAGCGG 59.548 55.0 0.0 0.0 0.00 5.52 R
5554 6343 0.178068 TTTGCGGTATCCTGCTCTCC 59.822 55.0 0.0 0.0 0.00 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.309528 TAACCATGCTCTAAGTGCGG 57.690 50.000 0.00 0.00 0.00 5.69
21 22 0.613260 AACCATGCTCTAAGTGCGGA 59.387 50.000 0.00 0.00 0.00 5.54
22 23 0.108138 ACCATGCTCTAAGTGCGGAC 60.108 55.000 0.00 0.00 0.00 4.79
23 24 1.148157 CCATGCTCTAAGTGCGGACG 61.148 60.000 0.00 0.00 0.00 4.79
24 25 1.519455 ATGCTCTAAGTGCGGACGC 60.519 57.895 10.13 10.13 42.35 5.19
34 35 3.870606 GCGGACGCACTACATTGT 58.129 55.556 12.31 0.00 41.49 2.71
35 36 1.419922 GCGGACGCACTACATTGTG 59.580 57.895 12.31 0.00 41.49 3.33
36 37 1.966493 GCGGACGCACTACATTGTGG 61.966 60.000 12.31 0.00 41.49 4.17
37 38 0.669318 CGGACGCACTACATTGTGGT 60.669 55.000 0.00 0.00 38.31 4.16
38 39 1.403116 CGGACGCACTACATTGTGGTA 60.403 52.381 5.41 0.00 38.31 3.25
39 40 2.737359 CGGACGCACTACATTGTGGTAT 60.737 50.000 5.41 0.00 38.31 2.73
40 41 2.607635 GGACGCACTACATTGTGGTATG 59.392 50.000 5.41 4.25 38.31 2.39
41 42 2.607635 GACGCACTACATTGTGGTATGG 59.392 50.000 5.41 1.42 38.31 2.74
42 43 2.235155 ACGCACTACATTGTGGTATGGA 59.765 45.455 5.41 0.00 38.31 3.41
43 44 2.866156 CGCACTACATTGTGGTATGGAG 59.134 50.000 5.41 0.00 41.43 3.86
44 45 3.206150 GCACTACATTGTGGTATGGAGG 58.794 50.000 5.41 0.00 40.22 4.30
45 46 3.808728 CACTACATTGTGGTATGGAGGG 58.191 50.000 5.41 0.00 40.22 4.30
46 47 3.454447 CACTACATTGTGGTATGGAGGGA 59.546 47.826 5.41 0.00 41.62 4.20
47 48 3.711704 ACTACATTGTGGTATGGAGGGAG 59.288 47.826 3.72 0.00 40.22 4.30
48 49 2.562296 ACATTGTGGTATGGAGGGAGT 58.438 47.619 0.00 0.00 0.00 3.85
49 50 3.731431 ACATTGTGGTATGGAGGGAGTA 58.269 45.455 0.00 0.00 0.00 2.59
50 51 4.108570 ACATTGTGGTATGGAGGGAGTAA 58.891 43.478 0.00 0.00 0.00 2.24
51 52 4.726825 ACATTGTGGTATGGAGGGAGTAAT 59.273 41.667 0.00 0.00 0.00 1.89
52 53 4.771114 TTGTGGTATGGAGGGAGTAATG 57.229 45.455 0.00 0.00 0.00 1.90
53 54 4.002256 TGTGGTATGGAGGGAGTAATGA 57.998 45.455 0.00 0.00 0.00 2.57
54 55 4.367166 TGTGGTATGGAGGGAGTAATGAA 58.633 43.478 0.00 0.00 0.00 2.57
55 56 4.785914 TGTGGTATGGAGGGAGTAATGAAA 59.214 41.667 0.00 0.00 0.00 2.69
56 57 5.251932 TGTGGTATGGAGGGAGTAATGAAAA 59.748 40.000 0.00 0.00 0.00 2.29
57 58 6.069088 TGTGGTATGGAGGGAGTAATGAAAAT 60.069 38.462 0.00 0.00 0.00 1.82
58 59 6.833933 GTGGTATGGAGGGAGTAATGAAAATT 59.166 38.462 0.00 0.00 0.00 1.82
59 60 7.996644 GTGGTATGGAGGGAGTAATGAAAATTA 59.003 37.037 0.00 0.00 0.00 1.40
60 61 7.996644 TGGTATGGAGGGAGTAATGAAAATTAC 59.003 37.037 1.22 1.22 37.30 1.89
61 62 7.996644 GGTATGGAGGGAGTAATGAAAATTACA 59.003 37.037 10.36 0.00 38.97 2.41
62 63 7.881775 ATGGAGGGAGTAATGAAAATTACAC 57.118 36.000 10.36 4.90 38.97 2.90
63 64 5.878116 TGGAGGGAGTAATGAAAATTACACG 59.122 40.000 10.36 0.00 38.97 4.49
64 65 5.878669 GGAGGGAGTAATGAAAATTACACGT 59.121 40.000 10.36 5.31 38.97 4.49
65 66 6.036844 GGAGGGAGTAATGAAAATTACACGTC 59.963 42.308 10.36 11.63 38.97 4.34
66 67 6.708285 AGGGAGTAATGAAAATTACACGTCT 58.292 36.000 10.36 4.14 38.97 4.18
67 68 6.594159 AGGGAGTAATGAAAATTACACGTCTG 59.406 38.462 10.36 0.00 38.97 3.51
68 69 6.370718 GGGAGTAATGAAAATTACACGTCTGT 59.629 38.462 10.36 0.00 38.97 3.41
69 70 7.412672 GGGAGTAATGAAAATTACACGTCTGTC 60.413 40.741 10.36 0.00 38.97 3.51
70 71 7.360575 AGTAATGAAAATTACACGTCTGTCC 57.639 36.000 10.36 0.00 38.97 4.02
71 72 6.932400 AGTAATGAAAATTACACGTCTGTCCA 59.068 34.615 10.36 0.00 38.97 4.02
72 73 6.627395 AATGAAAATTACACGTCTGTCCAA 57.373 33.333 0.00 0.00 0.00 3.53
73 74 6.627395 ATGAAAATTACACGTCTGTCCAAA 57.373 33.333 0.00 0.00 0.00 3.28
74 75 5.812652 TGAAAATTACACGTCTGTCCAAAC 58.187 37.500 0.00 0.00 0.00 2.93
75 76 5.354513 TGAAAATTACACGTCTGTCCAAACA 59.645 36.000 0.00 0.00 0.00 2.83
76 77 6.038825 TGAAAATTACACGTCTGTCCAAACAT 59.961 34.615 0.00 0.00 34.13 2.71
86 87 4.072131 TCTGTCCAAACATAGCCTTGAAC 58.928 43.478 0.00 0.00 34.13 3.18
112 113 9.884465 CGAAGTGAATTCTGAAGTAAAGAAAAT 57.116 29.630 7.05 0.00 37.22 1.82
124 125 9.762933 TGAAGTAAAGAAAATTCCAATCAAAGG 57.237 29.630 0.00 0.00 0.00 3.11
156 157 7.957002 TGCAAACTTTATTTTGATTAGGACCA 58.043 30.769 0.00 0.00 38.54 4.02
177 178 8.138712 GGACCAAATGAAACAATAACACAACTA 58.861 33.333 0.00 0.00 0.00 2.24
180 181 8.849490 CCAAATGAAACAATAACACAACTATCG 58.151 33.333 0.00 0.00 0.00 2.92
181 182 9.605955 CAAATGAAACAATAACACAACTATCGA 57.394 29.630 0.00 0.00 0.00 3.59
215 216 9.445786 TGTTTTCTTCGACTCATTTTAATTGAC 57.554 29.630 0.00 0.00 0.00 3.18
216 217 8.618952 GTTTTCTTCGACTCATTTTAATTGACG 58.381 33.333 0.00 0.00 0.00 4.35
217 218 7.416154 TTCTTCGACTCATTTTAATTGACGT 57.584 32.000 0.00 0.00 0.00 4.34
219 220 7.857569 TCTTCGACTCATTTTAATTGACGTTT 58.142 30.769 0.00 0.00 0.00 3.60
220 221 8.007716 TCTTCGACTCATTTTAATTGACGTTTC 58.992 33.333 0.00 0.00 0.00 2.78
248 249 8.939201 AATCTAGGATAAATACGAGCATCATG 57.061 34.615 0.00 0.00 33.17 3.07
249 250 7.703058 TCTAGGATAAATACGAGCATCATGA 57.297 36.000 0.00 0.00 33.17 3.07
250 251 8.298729 TCTAGGATAAATACGAGCATCATGAT 57.701 34.615 1.18 1.18 33.17 2.45
251 252 8.753133 TCTAGGATAAATACGAGCATCATGATT 58.247 33.333 5.16 0.00 33.17 2.57
252 253 9.376075 CTAGGATAAATACGAGCATCATGATTT 57.624 33.333 5.16 0.00 33.17 2.17
259 260 4.269183 ACGAGCATCATGATTTAAACCCA 58.731 39.130 5.16 0.00 33.17 4.51
260 261 4.336433 ACGAGCATCATGATTTAAACCCAG 59.664 41.667 5.16 0.00 33.17 4.45
261 262 4.576053 CGAGCATCATGATTTAAACCCAGA 59.424 41.667 5.16 0.00 33.17 3.86
263 264 6.427853 CGAGCATCATGATTTAAACCCAGATA 59.572 38.462 5.16 0.00 33.17 1.98
265 266 7.520798 AGCATCATGATTTAAACCCAGATAGA 58.479 34.615 5.16 0.00 0.00 1.98
269 270 7.861629 TCATGATTTAAACCCAGATAGACTGT 58.138 34.615 0.00 0.00 44.40 3.55
270 271 8.988060 TCATGATTTAAACCCAGATAGACTGTA 58.012 33.333 0.00 0.00 44.40 2.74
271 272 9.613428 CATGATTTAAACCCAGATAGACTGTAA 57.387 33.333 0.00 0.00 44.40 2.41
302 303 8.732746 ATTATACACCTAACCATCTCAAACAC 57.267 34.615 0.00 0.00 0.00 3.32
303 304 4.431416 ACACCTAACCATCTCAAACACA 57.569 40.909 0.00 0.00 0.00 3.72
304 305 4.389374 ACACCTAACCATCTCAAACACAG 58.611 43.478 0.00 0.00 0.00 3.66
305 306 3.753272 CACCTAACCATCTCAAACACAGG 59.247 47.826 0.00 0.00 0.00 4.00
306 307 3.394606 ACCTAACCATCTCAAACACAGGT 59.605 43.478 0.00 0.00 0.00 4.00
307 308 4.141251 ACCTAACCATCTCAAACACAGGTT 60.141 41.667 0.00 0.00 41.74 3.50
308 309 5.072600 ACCTAACCATCTCAAACACAGGTTA 59.927 40.000 0.00 0.00 39.77 2.85
309 310 6.001460 CCTAACCATCTCAAACACAGGTTAA 58.999 40.000 0.00 0.00 40.07 2.01
310 311 5.767816 AACCATCTCAAACACAGGTTAAC 57.232 39.130 0.00 0.00 37.57 2.01
311 312 4.787551 ACCATCTCAAACACAGGTTAACA 58.212 39.130 8.10 0.00 35.82 2.41
312 313 4.578928 ACCATCTCAAACACAGGTTAACAC 59.421 41.667 8.10 0.00 35.82 3.32
313 314 4.578516 CCATCTCAAACACAGGTTAACACA 59.421 41.667 8.10 0.00 35.82 3.72
314 315 5.505654 CCATCTCAAACACAGGTTAACACAC 60.506 44.000 8.10 0.00 35.82 3.82
315 316 3.619483 TCTCAAACACAGGTTAACACACG 59.381 43.478 8.10 0.00 35.82 4.49
316 317 3.336468 TCAAACACAGGTTAACACACGT 58.664 40.909 8.10 0.00 35.82 4.49
317 318 3.752222 TCAAACACAGGTTAACACACGTT 59.248 39.130 8.10 2.70 35.82 3.99
326 327 3.367190 GGTTAACACACGTTGGTTGGTTT 60.367 43.478 8.10 0.00 36.52 3.27
331 332 2.026879 CGTTGGTTGGTTTGCGGG 59.973 61.111 0.00 0.00 0.00 6.13
333 334 1.362355 GTTGGTTGGTTTGCGGGAG 59.638 57.895 0.00 0.00 0.00 4.30
336 337 0.402504 TGGTTGGTTTGCGGGAGTAT 59.597 50.000 0.00 0.00 0.00 2.12
337 338 0.808755 GGTTGGTTTGCGGGAGTATG 59.191 55.000 0.00 0.00 0.00 2.39
338 339 0.170339 GTTGGTTTGCGGGAGTATGC 59.830 55.000 0.00 0.00 0.00 3.14
339 340 0.250945 TTGGTTTGCGGGAGTATGCA 60.251 50.000 0.00 0.00 39.81 3.96
340 341 0.958382 TGGTTTGCGGGAGTATGCAC 60.958 55.000 0.00 0.00 41.57 4.57
352 353 2.738846 GAGTATGCACACACTGTTGGAG 59.261 50.000 0.00 0.00 0.00 3.86
435 436 3.110178 CGGAAGGGACGAACACGC 61.110 66.667 0.00 0.00 0.00 5.34
451 452 4.863925 GCCTGTCTCGCGCTCCTC 62.864 72.222 5.56 0.00 0.00 3.71
474 475 0.100503 ACGCCAAAGCAACAACAGTC 59.899 50.000 0.00 0.00 39.83 3.51
476 477 0.249447 GCCAAAGCAACAACAGTCCC 60.249 55.000 0.00 0.00 39.53 4.46
484 485 3.583086 AGCAACAACAGTCCCAGTACTAT 59.417 43.478 0.00 0.00 0.00 2.12
570 572 2.373224 CCATCCCTTCAAAGCTTCCTC 58.627 52.381 0.00 0.00 0.00 3.71
589 591 0.615850 CCCTTCCTTCTCCACTCCAC 59.384 60.000 0.00 0.00 0.00 4.02
599 601 0.550914 TCCACTCCACCAAACAAGCT 59.449 50.000 0.00 0.00 0.00 3.74
765 775 6.609237 TTTTTGAATGACACACAGAGAGAG 57.391 37.500 0.00 0.00 0.00 3.20
766 776 5.535753 TTTGAATGACACACAGAGAGAGA 57.464 39.130 0.00 0.00 0.00 3.10
767 777 4.780275 TGAATGACACACAGAGAGAGAG 57.220 45.455 0.00 0.00 0.00 3.20
768 778 4.401925 TGAATGACACACAGAGAGAGAGA 58.598 43.478 0.00 0.00 0.00 3.10
769 779 4.458642 TGAATGACACACAGAGAGAGAGAG 59.541 45.833 0.00 0.00 0.00 3.20
770 780 3.778954 TGACACACAGAGAGAGAGAGA 57.221 47.619 0.00 0.00 0.00 3.10
771 781 3.673902 TGACACACAGAGAGAGAGAGAG 58.326 50.000 0.00 0.00 0.00 3.20
772 782 3.326297 TGACACACAGAGAGAGAGAGAGA 59.674 47.826 0.00 0.00 0.00 3.10
773 783 3.935203 GACACACAGAGAGAGAGAGAGAG 59.065 52.174 0.00 0.00 0.00 3.20
774 784 3.582647 ACACACAGAGAGAGAGAGAGAGA 59.417 47.826 0.00 0.00 0.00 3.10
775 785 4.186926 CACACAGAGAGAGAGAGAGAGAG 58.813 52.174 0.00 0.00 0.00 3.20
776 786 4.081476 CACACAGAGAGAGAGAGAGAGAGA 60.081 50.000 0.00 0.00 0.00 3.10
777 787 4.161189 ACACAGAGAGAGAGAGAGAGAGAG 59.839 50.000 0.00 0.00 0.00 3.20
778 788 4.403752 CACAGAGAGAGAGAGAGAGAGAGA 59.596 50.000 0.00 0.00 0.00 3.10
779 789 4.648762 ACAGAGAGAGAGAGAGAGAGAGAG 59.351 50.000 0.00 0.00 0.00 3.20
780 790 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
781 791 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
782 792 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
783 793 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
784 794 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
785 795 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
786 796 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
787 797 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
788 798 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
789 799 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
790 800 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
791 801 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
792 802 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
793 803 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
797 807 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
876 886 2.617308 GTGGTGATGATGAGATGCCTTG 59.383 50.000 0.00 0.00 0.00 3.61
882 892 1.505477 GATGAGATGCCTTGCTCGCC 61.505 60.000 0.00 0.00 33.89 5.54
983 994 3.712907 CCCCAATCCCACGGTCGT 61.713 66.667 0.00 0.00 0.00 4.34
1128 1158 1.540363 CCAGATTTATGCGGCCGTACT 60.540 52.381 28.70 12.53 0.00 2.73
1241 1283 1.979693 GAGCCTGTCGGACTCTGGT 60.980 63.158 9.88 3.36 33.43 4.00
1242 1284 2.219325 GAGCCTGTCGGACTCTGGTG 62.219 65.000 9.88 0.00 33.43 4.17
1243 1285 2.973899 CCTGTCGGACTCTGGTGG 59.026 66.667 9.88 0.00 0.00 4.61
1244 1286 1.908793 CCTGTCGGACTCTGGTGGT 60.909 63.158 9.88 0.00 0.00 4.16
1652 1709 3.296709 CTACACCACGCTCCGCCTT 62.297 63.158 0.00 0.00 0.00 4.35
1843 1900 2.058595 CCGTCCAGTACCTCCCCAG 61.059 68.421 0.00 0.00 0.00 4.45
2336 2396 2.524394 GCAGAGGGGCTCCGGATA 60.524 66.667 3.57 0.00 38.33 2.59
2389 2449 2.840974 AGGTGATTCCTCGCGTTTG 58.159 52.632 5.77 0.00 44.42 2.93
2390 2450 1.134694 GGTGATTCCTCGCGTTTGC 59.865 57.895 5.77 0.00 32.43 3.68
2391 2451 1.573829 GGTGATTCCTCGCGTTTGCA 61.574 55.000 5.77 0.00 42.97 4.08
2392 2452 0.237235 GTGATTCCTCGCGTTTGCAA 59.763 50.000 5.77 0.00 42.97 4.08
2447 2507 6.426937 GCATAACTGAAAACTCAAGGACAGTA 59.573 38.462 0.00 0.00 37.57 2.74
2456 2516 5.552870 ACTCAAGGACAGTACAGATTGTT 57.447 39.130 0.00 0.00 0.00 2.83
2457 2517 6.665992 ACTCAAGGACAGTACAGATTGTTA 57.334 37.500 0.00 0.00 0.00 2.41
2458 2518 7.246171 ACTCAAGGACAGTACAGATTGTTAT 57.754 36.000 0.00 0.00 0.00 1.89
2460 2520 6.406370 TCAAGGACAGTACAGATTGTTATGG 58.594 40.000 0.00 0.00 0.00 2.74
2477 2544 0.546122 TGGTATCCGAAATGCAGCCT 59.454 50.000 0.00 0.00 0.00 4.58
2478 2545 0.947244 GGTATCCGAAATGCAGCCTG 59.053 55.000 0.00 0.00 0.00 4.85
2479 2546 0.947244 GTATCCGAAATGCAGCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
2480 2547 0.836606 TATCCGAAATGCAGCCTGGA 59.163 50.000 0.00 0.00 0.00 3.86
2484 2551 1.377202 GAAATGCAGCCTGGACGGA 60.377 57.895 0.00 0.00 33.16 4.69
2591 2852 1.285641 GAACACATGCACCCAACCG 59.714 57.895 0.00 0.00 0.00 4.44
2628 2890 4.682021 AAATCTCCCCTTCACCAATTCT 57.318 40.909 0.00 0.00 0.00 2.40
2630 2892 1.004745 TCTCCCCTTCACCAATTCTGC 59.995 52.381 0.00 0.00 0.00 4.26
2633 2895 1.180029 CCCTTCACCAATTCTGCAGG 58.820 55.000 15.13 0.00 0.00 4.85
2634 2896 1.548582 CCCTTCACCAATTCTGCAGGT 60.549 52.381 15.13 0.32 35.65 4.00
2635 2897 2.290896 CCCTTCACCAATTCTGCAGGTA 60.291 50.000 15.13 2.56 33.49 3.08
2636 2898 3.012518 CCTTCACCAATTCTGCAGGTAG 58.987 50.000 15.13 0.00 33.49 3.18
2637 2899 3.560025 CCTTCACCAATTCTGCAGGTAGT 60.560 47.826 15.13 1.90 33.49 2.73
2640 3026 4.769688 TCACCAATTCTGCAGGTAGTATG 58.230 43.478 15.13 6.71 33.49 2.39
2653 3039 6.258160 GCAGGTAGTATGCATAACTTGTTTG 58.742 40.000 17.20 8.93 43.31 2.93
2654 3040 6.677920 GCAGGTAGTATGCATAACTTGTTTGG 60.678 42.308 17.20 2.77 43.31 3.28
2696 3082 7.342769 TCTCGAACATTTAGCCTGATAGTTA 57.657 36.000 0.00 0.00 0.00 2.24
2697 3083 7.201145 TCTCGAACATTTAGCCTGATAGTTAC 58.799 38.462 0.00 0.00 0.00 2.50
2839 3225 8.603242 ACTAATGATTATCGTATTGTCAACCC 57.397 34.615 0.00 0.00 0.00 4.11
2840 3226 8.208224 ACTAATGATTATCGTATTGTCAACCCA 58.792 33.333 0.00 0.00 0.00 4.51
2847 3233 5.918426 TCGTATTGTCAACCCATACTACA 57.082 39.130 0.00 0.00 0.00 2.74
2852 3238 7.870954 CGTATTGTCAACCCATACTACATACAT 59.129 37.037 0.00 0.00 0.00 2.29
2861 3247 5.034797 CCATACTACATACATACCGCGATG 58.965 45.833 8.23 7.02 0.00 3.84
2963 3351 2.907042 ACCTCTCCTGGTTCTTTGTAGG 59.093 50.000 0.00 0.00 36.89 3.18
3007 3395 5.651387 AACCTTAGTCGGTTAGTCCTAAC 57.349 43.478 8.39 8.39 45.14 2.34
3011 3399 5.184671 CCTTAGTCGGTTAGTCCTAACAGTT 59.815 44.000 16.65 9.55 45.32 3.16
3027 3416 8.801299 TCCTAACAGTTTGAAATGCATATTTGA 58.199 29.630 0.00 0.00 36.66 2.69
3152 3544 3.202151 TGGCTGCTAGTTTTATAAGGCCT 59.798 43.478 0.00 0.00 38.07 5.19
3256 3683 7.388437 ACTTGGTCGTAGTGAAATATTGGTTA 58.612 34.615 0.00 0.00 0.00 2.85
3283 3710 7.920151 TCAACTTTTGGTGAGAATGTTATTGTG 59.080 33.333 0.00 0.00 41.97 3.33
3285 3712 7.202526 ACTTTTGGTGAGAATGTTATTGTGTG 58.797 34.615 0.00 0.00 0.00 3.82
3286 3713 6.951062 TTTGGTGAGAATGTTATTGTGTGA 57.049 33.333 0.00 0.00 0.00 3.58
3287 3714 6.951062 TTGGTGAGAATGTTATTGTGTGAA 57.049 33.333 0.00 0.00 0.00 3.18
3288 3715 7.523293 TTGGTGAGAATGTTATTGTGTGAAT 57.477 32.000 0.00 0.00 0.00 2.57
3289 3716 8.628630 TTGGTGAGAATGTTATTGTGTGAATA 57.371 30.769 0.00 0.00 0.00 1.75
3290 3717 8.806429 TGGTGAGAATGTTATTGTGTGAATAT 57.194 30.769 0.00 0.00 0.00 1.28
3291 3718 9.898152 TGGTGAGAATGTTATTGTGTGAATATA 57.102 29.630 0.00 0.00 0.00 0.86
3387 3898 9.613428 TTTTGTTGTAGTATTCATATCTGGGAG 57.387 33.333 0.00 0.00 0.00 4.30
3401 3912 4.826274 TCTGGGAGTGGAAATAACTCTG 57.174 45.455 3.80 0.00 43.03 3.35
3457 3973 9.797642 ATATTTGATACTGGAAATCACTATGCA 57.202 29.630 0.00 0.00 33.18 3.96
3624 4254 0.321122 GGGGCCGCATGAGAGATAAG 60.321 60.000 16.21 0.00 0.00 1.73
3712 4342 2.357517 GTGGAGTGCCTGGTGTCG 60.358 66.667 0.00 0.00 34.31 4.35
3731 4361 1.990563 CGTAGCCGTTCTTGTACAAGG 59.009 52.381 30.35 18.96 38.88 3.61
3741 4371 5.347907 CGTTCTTGTACAAGGAATACCAGTC 59.652 44.000 30.35 10.53 38.88 3.51
3834 4467 2.158623 TGTGTCCACTCCATTTCTGCTT 60.159 45.455 0.00 0.00 0.00 3.91
3843 4477 6.095377 CACTCCATTTCTGCTTAACAAATCC 58.905 40.000 0.00 0.00 0.00 3.01
3852 4486 5.470098 TCTGCTTAACAAATCCTCAAGTGTC 59.530 40.000 0.00 0.00 0.00 3.67
3854 4488 5.239306 TGCTTAACAAATCCTCAAGTGTCTG 59.761 40.000 0.00 0.00 0.00 3.51
3858 4493 5.757850 ACAAATCCTCAAGTGTCTGTTTC 57.242 39.130 0.00 0.00 0.00 2.78
3862 4497 1.541233 CCTCAAGTGTCTGTTTCCGCT 60.541 52.381 0.00 0.00 0.00 5.52
3890 4525 5.954752 TGATTTGTGGGCCACATCTTATAAA 59.045 36.000 37.81 26.70 44.16 1.40
4002 4639 5.046950 TGGATGTTGGTAAAGTTTTATGCCC 60.047 40.000 0.00 0.00 0.00 5.36
4046 4683 2.492088 CCACTCTTCACACCTATGACGA 59.508 50.000 0.00 0.00 0.00 4.20
4082 4725 4.771577 TCTTAGCCTTCATTTTCCATTGCA 59.228 37.500 0.00 0.00 0.00 4.08
4086 4729 3.306225 GCCTTCATTTTCCATTGCACTCA 60.306 43.478 0.00 0.00 0.00 3.41
4087 4730 4.491676 CCTTCATTTTCCATTGCACTCAG 58.508 43.478 0.00 0.00 0.00 3.35
4112 4755 8.925338 AGTATAAACCAAGGTTGATAGACTAGG 58.075 37.037 8.95 0.00 38.47 3.02
4354 4997 4.589216 TTGAGTCCTGCTTCAAATTTGG 57.411 40.909 17.90 4.32 0.00 3.28
4355 4998 2.297033 TGAGTCCTGCTTCAAATTTGGC 59.703 45.455 17.90 14.24 0.00 4.52
4456 5105 8.858003 ATATGTGATGTTTAGTACTTGAGACG 57.142 34.615 0.00 0.00 0.00 4.18
4459 5108 5.061064 GTGATGTTTAGTACTTGAGACGCTG 59.939 44.000 0.00 0.00 0.00 5.18
4463 5112 2.726832 AGTACTTGAGACGCTGTTCC 57.273 50.000 0.00 0.00 0.00 3.62
4471 5120 2.097825 GAGACGCTGTTCCTAACCCTA 58.902 52.381 0.00 0.00 0.00 3.53
4476 5125 5.019785 ACGCTGTTCCTAACCCTATTTAG 57.980 43.478 0.00 0.00 0.00 1.85
4479 5128 5.981915 CGCTGTTCCTAACCCTATTTAGTAC 59.018 44.000 0.00 0.00 0.00 2.73
4480 5129 6.183360 CGCTGTTCCTAACCCTATTTAGTACT 60.183 42.308 0.00 0.00 0.00 2.73
4481 5130 7.013655 CGCTGTTCCTAACCCTATTTAGTACTA 59.986 40.741 0.00 0.00 0.00 1.82
4482 5131 8.140628 GCTGTTCCTAACCCTATTTAGTACTAC 58.859 40.741 0.91 0.00 0.00 2.73
4483 5132 8.539117 TGTTCCTAACCCTATTTAGTACTACC 57.461 38.462 0.91 0.00 0.00 3.18
4484 5133 8.346828 TGTTCCTAACCCTATTTAGTACTACCT 58.653 37.037 0.91 0.00 0.00 3.08
4485 5134 8.855110 GTTCCTAACCCTATTTAGTACTACCTC 58.145 40.741 0.91 0.00 0.00 3.85
4486 5135 8.355442 TCCTAACCCTATTTAGTACTACCTCT 57.645 38.462 0.91 0.00 0.00 3.69
4487 5136 8.223330 TCCTAACCCTATTTAGTACTACCTCTG 58.777 40.741 0.91 0.00 0.00 3.35
4488 5137 8.003629 CCTAACCCTATTTAGTACTACCTCTGT 58.996 40.741 0.91 0.00 0.00 3.41
4491 5140 9.774071 AACCCTATTTAGTACTACCTCTGTAAA 57.226 33.333 0.91 0.00 0.00 2.01
4492 5141 9.194972 ACCCTATTTAGTACTACCTCTGTAAAC 57.805 37.037 0.91 0.00 0.00 2.01
4493 5142 9.193806 CCCTATTTAGTACTACCTCTGTAAACA 57.806 37.037 0.91 0.00 0.00 2.83
4496 5145 8.999220 ATTTAGTACTACCTCTGTAAACAAGC 57.001 34.615 0.91 0.00 0.00 4.01
4497 5146 7.771927 TTAGTACTACCTCTGTAAACAAGCT 57.228 36.000 0.91 0.00 0.00 3.74
4498 5147 8.868522 TTAGTACTACCTCTGTAAACAAGCTA 57.131 34.615 0.91 0.00 0.00 3.32
4499 5148 7.771927 AGTACTACCTCTGTAAACAAGCTAA 57.228 36.000 0.00 0.00 0.00 3.09
4500 5149 7.828712 AGTACTACCTCTGTAAACAAGCTAAG 58.171 38.462 0.00 0.00 0.00 2.18
4501 5150 6.912951 ACTACCTCTGTAAACAAGCTAAGA 57.087 37.500 0.00 0.00 0.00 2.10
4502 5151 6.689554 ACTACCTCTGTAAACAAGCTAAGAC 58.310 40.000 0.00 0.00 0.00 3.01
4503 5152 4.557205 ACCTCTGTAAACAAGCTAAGACG 58.443 43.478 0.00 0.00 0.00 4.18
4504 5153 4.038883 ACCTCTGTAAACAAGCTAAGACGT 59.961 41.667 0.00 0.00 0.00 4.34
4505 5154 4.989168 CCTCTGTAAACAAGCTAAGACGTT 59.011 41.667 0.00 0.00 0.00 3.99
4506 5155 5.465724 CCTCTGTAAACAAGCTAAGACGTTT 59.534 40.000 0.00 0.00 35.79 3.60
4507 5156 6.018180 CCTCTGTAAACAAGCTAAGACGTTTT 60.018 38.462 0.00 0.00 33.79 2.43
4508 5157 7.170320 CCTCTGTAAACAAGCTAAGACGTTTTA 59.830 37.037 0.00 0.00 33.79 1.52
4509 5158 8.068893 TCTGTAAACAAGCTAAGACGTTTTAG 57.931 34.615 18.85 18.85 33.79 1.85
4510 5159 7.922278 TCTGTAAACAAGCTAAGACGTTTTAGA 59.078 33.333 25.37 5.41 33.42 2.10
4511 5160 8.597662 TGTAAACAAGCTAAGACGTTTTAGAT 57.402 30.769 25.37 18.51 33.42 1.98
4512 5161 8.706035 TGTAAACAAGCTAAGACGTTTTAGATC 58.294 33.333 25.37 11.46 33.42 2.75
4513 5162 7.724305 AAACAAGCTAAGACGTTTTAGATCA 57.276 32.000 25.37 0.00 33.42 2.92
4514 5163 6.707599 ACAAGCTAAGACGTTTTAGATCAC 57.292 37.500 25.37 10.54 33.42 3.06
4515 5164 6.456501 ACAAGCTAAGACGTTTTAGATCACT 58.543 36.000 25.37 12.35 33.42 3.41
4516 5165 7.600065 ACAAGCTAAGACGTTTTAGATCACTA 58.400 34.615 25.37 0.00 33.42 2.74
4517 5166 7.755822 ACAAGCTAAGACGTTTTAGATCACTAG 59.244 37.037 25.37 12.17 33.42 2.57
4518 5167 7.393841 AGCTAAGACGTTTTAGATCACTAGT 57.606 36.000 25.37 0.00 33.42 2.57
4519 5168 7.251994 AGCTAAGACGTTTTAGATCACTAGTG 58.748 38.462 25.37 17.17 33.42 2.74
4520 5169 7.120873 AGCTAAGACGTTTTAGATCACTAGTGA 59.879 37.037 27.07 27.07 36.38 3.41
4549 5198 8.771920 AAAACGTCTTATATGTGATGTTCTCA 57.228 30.769 13.88 0.00 40.30 3.27
4550 5199 7.993821 AACGTCTTATATGTGATGTTCTCAG 57.006 36.000 9.94 0.00 37.75 3.35
4551 5200 7.334844 ACGTCTTATATGTGATGTTCTCAGA 57.665 36.000 0.00 0.00 33.51 3.27
4552 5201 7.421599 ACGTCTTATATGTGATGTTCTCAGAG 58.578 38.462 0.00 0.00 33.51 3.35
4553 5202 6.860539 CGTCTTATATGTGATGTTCTCAGAGG 59.139 42.308 0.00 0.00 33.51 3.69
4554 5203 7.151308 GTCTTATATGTGATGTTCTCAGAGGG 58.849 42.308 0.00 0.00 33.51 4.30
4555 5204 7.014711 GTCTTATATGTGATGTTCTCAGAGGGA 59.985 40.741 0.00 0.00 33.51 4.20
4556 5205 5.804944 ATATGTGATGTTCTCAGAGGGAG 57.195 43.478 0.00 0.00 45.49 4.30
4557 5206 2.894731 TGTGATGTTCTCAGAGGGAGT 58.105 47.619 0.00 0.00 44.40 3.85
4558 5207 4.047627 TGTGATGTTCTCAGAGGGAGTA 57.952 45.455 0.00 0.00 44.40 2.59
4559 5208 4.019858 TGTGATGTTCTCAGAGGGAGTAG 58.980 47.826 0.00 0.00 44.40 2.57
4566 5215 6.123651 TGTTCTCAGAGGGAGTAGATCTTAC 58.876 44.000 0.00 0.00 44.40 2.34
4571 5220 6.916909 TCAGAGGGAGTAGATCTTACTGATT 58.083 40.000 0.00 0.00 35.14 2.57
4625 5274 2.018355 TACAGGAGCAGTGGTGGTAA 57.982 50.000 0.00 0.00 33.41 2.85
4640 5289 1.516423 GTAAGGAGGACCAGTCGGC 59.484 63.158 0.00 0.00 38.94 5.54
4642 5291 0.252103 TAAGGAGGACCAGTCGGCTT 60.252 55.000 0.00 0.00 38.94 4.35
4650 5299 2.202492 CAGTCGGCTTCGTCCTCG 60.202 66.667 0.00 0.00 38.55 4.63
4659 5308 2.201732 GCTTCGTCCTCGCATAAATCA 58.798 47.619 0.00 0.00 36.96 2.57
4671 5320 3.040795 GCATAAATCACAAGATGCTGCG 58.959 45.455 0.00 0.00 41.19 5.18
4749 5398 4.574674 TTCATCTGTTACATCAAGGGCT 57.425 40.909 0.00 0.00 0.00 5.19
5029 5678 3.684103 TCAACTGGCACTTGTTTTACG 57.316 42.857 6.74 0.00 0.00 3.18
5030 5679 2.356382 TCAACTGGCACTTGTTTTACGG 59.644 45.455 6.74 0.00 0.00 4.02
5031 5680 0.666374 ACTGGCACTTGTTTTACGGC 59.334 50.000 0.00 0.00 0.00 5.68
5032 5681 0.665835 CTGGCACTTGTTTTACGGCA 59.334 50.000 0.00 0.00 0.00 5.69
5033 5682 0.382515 TGGCACTTGTTTTACGGCAC 59.617 50.000 0.00 0.00 0.00 5.01
5037 5689 1.944024 CACTTGTTTTACGGCACCTCA 59.056 47.619 0.00 0.00 0.00 3.86
5087 5739 3.667960 CGCCTCTGTTGATAGTGTTTTGC 60.668 47.826 0.00 0.00 0.00 3.68
5105 5757 3.717400 TGCATAAAAGCAAAACCGACA 57.283 38.095 0.00 0.00 42.46 4.35
5112 5764 2.568623 AGCAAAACCGACAGGATTCT 57.431 45.000 0.00 0.00 41.02 2.40
5192 5950 9.295825 ACTGAACTATTTATTTGTTCCATGTCA 57.704 29.630 0.00 0.00 39.24 3.58
5193 5951 9.778993 CTGAACTATTTATTTGTTCCATGTCAG 57.221 33.333 0.00 0.00 39.24 3.51
5230 5988 2.125552 TCTTGGTGCGCTGGATCG 60.126 61.111 9.73 0.00 0.00 3.69
5238 5996 0.673333 TGCGCTGGATCGTTGATGTT 60.673 50.000 9.73 0.00 0.00 2.71
5262 6030 1.267806 AGCTGAAATTTCTGTGCACGG 59.732 47.619 20.12 20.12 0.00 4.94
5263 6031 1.266718 GCTGAAATTTCTGTGCACGGA 59.733 47.619 24.54 24.54 0.00 4.69
5343 6132 3.259064 TGGTTATCTGTAAAGCGCACTC 58.741 45.455 11.47 0.00 0.00 3.51
5526 6315 4.021192 TCATCATCCCTTTTGCTTGTTTCC 60.021 41.667 0.00 0.00 0.00 3.13
5528 6317 3.903090 TCATCCCTTTTGCTTGTTTCCAT 59.097 39.130 0.00 0.00 0.00 3.41
5541 6330 1.730064 GTTTCCATTGAGAACGCGCTA 59.270 47.619 5.73 0.00 0.00 4.26
5554 6343 4.018609 CGCTACATCCGCTCCAAG 57.981 61.111 0.00 0.00 0.00 3.61
5601 6394 3.057736 CCTGAAAATGTTGAGCTGTGAGG 60.058 47.826 0.00 0.00 0.00 3.86
5675 6468 5.278169 GCACATCTGTTCACAAGTTTCATCT 60.278 40.000 0.00 0.00 0.00 2.90
5730 6523 4.926860 TCTGTTCGCATTTGTGTATCAG 57.073 40.909 0.00 0.00 0.00 2.90
5735 6528 4.200838 TCGCATTTGTGTATCAGAGGAA 57.799 40.909 0.00 0.00 0.00 3.36
5742 6535 4.743057 TGTGTATCAGAGGAATGGAGTG 57.257 45.455 0.00 0.00 0.00 3.51
5743 6536 4.352893 TGTGTATCAGAGGAATGGAGTGA 58.647 43.478 0.00 0.00 0.00 3.41
5787 6672 1.868109 GCCGTTCTTTCCCAGTTTTGC 60.868 52.381 0.00 0.00 0.00 3.68
5818 6703 4.440839 GAAAATTTTCGTGGGATGCTCT 57.559 40.909 14.83 0.00 0.00 4.09
5820 6705 2.787473 ATTTTCGTGGGATGCTCTGA 57.213 45.000 0.00 0.00 0.00 3.27
5821 6706 2.099141 TTTTCGTGGGATGCTCTGAG 57.901 50.000 0.00 0.00 0.00 3.35
5832 6721 2.238942 TGCTCTGAGCGAAAGTTTCA 57.761 45.000 23.35 0.84 46.26 2.69
5842 6731 1.063912 CGAAAGTTTCACAGTGCAGCA 59.936 47.619 15.67 0.00 0.00 4.41
5845 6734 1.008079 GTTTCACAGTGCAGCAGCC 60.008 57.895 0.00 0.00 41.13 4.85
5850 6739 2.746671 CAGTGCAGCAGCCCTCAG 60.747 66.667 0.00 0.00 41.13 3.35
5857 6746 2.743928 GCAGCCCTCAGACAACCG 60.744 66.667 0.00 0.00 0.00 4.44
5858 6747 3.059982 CAGCCCTCAGACAACCGA 58.940 61.111 0.00 0.00 0.00 4.69
5859 6748 1.079543 CAGCCCTCAGACAACCGAG 60.080 63.158 0.00 0.00 0.00 4.63
5860 6749 1.534235 AGCCCTCAGACAACCGAGT 60.534 57.895 0.00 0.00 0.00 4.18
5862 6751 1.293498 CCCTCAGACAACCGAGTGG 59.707 63.158 0.00 0.00 42.84 4.00
5863 6752 1.293498 CCTCAGACAACCGAGTGGG 59.707 63.158 0.00 0.00 40.75 4.61
5875 6764 1.970640 CCGAGTGGGATGGATGTATGA 59.029 52.381 0.00 0.00 38.47 2.15
5876 6765 2.028658 CCGAGTGGGATGGATGTATGAG 60.029 54.545 0.00 0.00 38.47 2.90
5877 6766 2.611473 CGAGTGGGATGGATGTATGAGC 60.611 54.545 0.00 0.00 0.00 4.26
5878 6767 1.345741 AGTGGGATGGATGTATGAGCG 59.654 52.381 0.00 0.00 0.00 5.03
5879 6768 0.035317 TGGGATGGATGTATGAGCGC 59.965 55.000 0.00 0.00 0.00 5.92
5880 6769 0.674895 GGGATGGATGTATGAGCGCC 60.675 60.000 2.29 0.00 0.00 6.53
5881 6770 0.322975 GGATGGATGTATGAGCGCCT 59.677 55.000 2.29 0.00 0.00 5.52
5883 6772 0.604780 ATGGATGTATGAGCGCCTGC 60.605 55.000 2.29 0.00 43.24 4.85
5893 6782 4.439472 GCGCCTGCGTTTGTACCG 62.439 66.667 13.57 0.00 42.09 4.02
5894 6783 3.039588 CGCCTGCGTTTGTACCGT 61.040 61.111 2.83 0.00 34.35 4.83
5895 6784 2.600475 CGCCTGCGTTTGTACCGTT 61.600 57.895 2.83 0.00 34.35 4.44
5896 6785 1.082366 GCCTGCGTTTGTACCGTTG 60.082 57.895 0.00 0.00 0.00 4.10
5897 6786 1.778027 GCCTGCGTTTGTACCGTTGT 61.778 55.000 0.00 0.00 0.00 3.32
5898 6787 0.658897 CCTGCGTTTGTACCGTTGTT 59.341 50.000 0.00 0.00 0.00 2.83
5899 6788 1.333435 CCTGCGTTTGTACCGTTGTTC 60.333 52.381 0.00 0.00 0.00 3.18
5900 6789 1.328069 CTGCGTTTGTACCGTTGTTCA 59.672 47.619 0.00 0.00 0.00 3.18
5901 6790 1.736126 TGCGTTTGTACCGTTGTTCAA 59.264 42.857 0.00 0.00 30.94 2.69
5902 6791 2.161012 TGCGTTTGTACCGTTGTTCAAA 59.839 40.909 0.00 0.00 38.80 2.69
5903 6792 3.169733 GCGTTTGTACCGTTGTTCAAAA 58.830 40.909 0.00 0.00 41.47 2.44
5904 6793 3.607209 GCGTTTGTACCGTTGTTCAAAAA 59.393 39.130 0.00 0.00 41.47 1.94
5974 6872 2.768920 CGAAGTGTTCTCGAGCGCG 61.769 63.158 7.81 2.41 39.35 6.86
6010 6908 2.320367 CACGTTCAACCGAGAGAGAAG 58.680 52.381 0.00 0.00 0.00 2.85
6137 7497 4.804108 CGACTCACAGAAAGTTGATCTCT 58.196 43.478 0.00 0.00 30.87 3.10
6138 7498 5.620205 GCGACTCACAGAAAGTTGATCTCTA 60.620 44.000 0.00 0.00 30.87 2.43
6165 7525 2.288763 GGCCACGTGTCATTCCATTTTT 60.289 45.455 15.65 0.00 0.00 1.94
6189 7549 8.865590 TTTTTACAGTGCTAGAACAAAAATCC 57.134 30.769 3.00 0.00 0.00 3.01
6190 7550 7.575414 TTTACAGTGCTAGAACAAAAATCCA 57.425 32.000 3.00 0.00 0.00 3.41
6191 7551 7.759489 TTACAGTGCTAGAACAAAAATCCAT 57.241 32.000 3.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.235155 TCCGCACTTAGAGCATGGTTAA 59.765 45.455 0.00 0.00 0.00 2.01
2 3 0.613260 TCCGCACTTAGAGCATGGTT 59.387 50.000 0.00 0.00 0.00 3.67
3 4 0.108138 GTCCGCACTTAGAGCATGGT 60.108 55.000 0.00 0.00 0.00 3.55
4 5 1.148157 CGTCCGCACTTAGAGCATGG 61.148 60.000 2.26 0.00 0.00 3.66
5 6 1.756375 GCGTCCGCACTTAGAGCATG 61.756 60.000 6.82 0.00 41.49 4.06
6 7 1.519455 GCGTCCGCACTTAGAGCAT 60.519 57.895 6.82 0.00 41.49 3.79
7 8 2.126071 GCGTCCGCACTTAGAGCA 60.126 61.111 6.82 0.00 41.49 4.26
17 18 1.419922 CACAATGTAGTGCGTCCGC 59.580 57.895 4.42 4.42 42.35 5.54
18 19 0.669318 ACCACAATGTAGTGCGTCCG 60.669 55.000 0.00 0.00 38.18 4.79
19 20 2.373540 TACCACAATGTAGTGCGTCC 57.626 50.000 0.00 0.00 38.18 4.79
20 21 2.607635 CCATACCACAATGTAGTGCGTC 59.392 50.000 0.00 0.00 38.18 5.19
21 22 2.235155 TCCATACCACAATGTAGTGCGT 59.765 45.455 0.00 0.00 38.18 5.24
22 23 2.866156 CTCCATACCACAATGTAGTGCG 59.134 50.000 0.00 0.00 38.18 5.34
23 24 3.206150 CCTCCATACCACAATGTAGTGC 58.794 50.000 0.00 0.00 38.18 4.40
24 25 3.454447 TCCCTCCATACCACAATGTAGTG 59.546 47.826 0.00 0.00 39.21 2.74
25 26 3.711704 CTCCCTCCATACCACAATGTAGT 59.288 47.826 0.00 0.00 0.00 2.73
26 27 3.711704 ACTCCCTCCATACCACAATGTAG 59.288 47.826 0.00 0.00 0.00 2.74
27 28 3.731431 ACTCCCTCCATACCACAATGTA 58.269 45.455 0.00 0.00 0.00 2.29
28 29 2.562296 ACTCCCTCCATACCACAATGT 58.438 47.619 0.00 0.00 0.00 2.71
29 30 4.771114 TTACTCCCTCCATACCACAATG 57.229 45.455 0.00 0.00 0.00 2.82
30 31 4.975147 TCATTACTCCCTCCATACCACAAT 59.025 41.667 0.00 0.00 0.00 2.71
31 32 4.367166 TCATTACTCCCTCCATACCACAA 58.633 43.478 0.00 0.00 0.00 3.33
32 33 4.002256 TCATTACTCCCTCCATACCACA 57.998 45.455 0.00 0.00 0.00 4.17
33 34 5.367945 TTTCATTACTCCCTCCATACCAC 57.632 43.478 0.00 0.00 0.00 4.16
34 35 6.590656 ATTTTCATTACTCCCTCCATACCA 57.409 37.500 0.00 0.00 0.00 3.25
35 36 7.996644 TGTAATTTTCATTACTCCCTCCATACC 59.003 37.037 6.65 0.00 43.73 2.73
36 37 8.837389 GTGTAATTTTCATTACTCCCTCCATAC 58.163 37.037 6.65 0.00 43.73 2.39
37 38 7.713507 CGTGTAATTTTCATTACTCCCTCCATA 59.286 37.037 6.65 0.00 43.73 2.74
38 39 6.542370 CGTGTAATTTTCATTACTCCCTCCAT 59.458 38.462 6.65 0.00 43.73 3.41
39 40 5.878116 CGTGTAATTTTCATTACTCCCTCCA 59.122 40.000 6.65 0.00 43.73 3.86
40 41 5.878669 ACGTGTAATTTTCATTACTCCCTCC 59.121 40.000 6.65 0.00 43.73 4.30
41 42 6.817140 AGACGTGTAATTTTCATTACTCCCTC 59.183 38.462 0.00 1.38 43.73 4.30
42 43 6.594159 CAGACGTGTAATTTTCATTACTCCCT 59.406 38.462 0.00 1.14 43.73 4.20
43 44 6.370718 ACAGACGTGTAATTTTCATTACTCCC 59.629 38.462 0.00 0.00 43.73 4.30
44 45 7.360575 ACAGACGTGTAATTTTCATTACTCC 57.639 36.000 0.00 0.00 43.73 3.85
45 46 7.117236 TGGACAGACGTGTAATTTTCATTACTC 59.883 37.037 0.00 2.94 43.73 2.59
46 47 6.932400 TGGACAGACGTGTAATTTTCATTACT 59.068 34.615 0.00 0.00 43.73 2.24
47 48 7.124347 TGGACAGACGTGTAATTTTCATTAC 57.876 36.000 0.00 0.00 43.67 1.89
48 49 7.731882 TTGGACAGACGTGTAATTTTCATTA 57.268 32.000 0.00 0.00 36.88 1.90
49 50 6.627395 TTGGACAGACGTGTAATTTTCATT 57.373 33.333 0.00 0.00 36.88 2.57
50 51 6.038825 TGTTTGGACAGACGTGTAATTTTCAT 59.961 34.615 0.00 0.00 36.88 2.57
51 52 5.354513 TGTTTGGACAGACGTGTAATTTTCA 59.645 36.000 0.00 0.00 36.88 2.69
52 53 5.812652 TGTTTGGACAGACGTGTAATTTTC 58.187 37.500 0.00 0.00 36.88 2.29
53 54 5.821516 TGTTTGGACAGACGTGTAATTTT 57.178 34.783 0.00 0.00 36.88 1.82
54 55 6.348213 GCTATGTTTGGACAGACGTGTAATTT 60.348 38.462 0.00 0.00 39.58 1.82
55 56 5.121768 GCTATGTTTGGACAGACGTGTAATT 59.878 40.000 0.00 0.00 39.58 1.40
56 57 4.630069 GCTATGTTTGGACAGACGTGTAAT 59.370 41.667 0.00 0.00 39.58 1.89
57 58 3.991773 GCTATGTTTGGACAGACGTGTAA 59.008 43.478 0.00 0.00 39.58 2.41
58 59 3.581755 GCTATGTTTGGACAGACGTGTA 58.418 45.455 0.00 0.00 39.58 2.90
59 60 2.413837 GCTATGTTTGGACAGACGTGT 58.586 47.619 0.00 0.00 39.58 4.49
60 61 1.732259 GGCTATGTTTGGACAGACGTG 59.268 52.381 0.00 0.00 39.58 4.49
61 62 1.623811 AGGCTATGTTTGGACAGACGT 59.376 47.619 0.00 0.00 39.58 4.34
62 63 2.386661 AGGCTATGTTTGGACAGACG 57.613 50.000 0.00 0.00 39.58 4.18
63 64 3.674997 TCAAGGCTATGTTTGGACAGAC 58.325 45.455 0.00 0.00 39.58 3.51
64 65 4.072131 GTTCAAGGCTATGTTTGGACAGA 58.928 43.478 0.00 0.00 39.58 3.41
65 66 3.120199 CGTTCAAGGCTATGTTTGGACAG 60.120 47.826 0.00 0.00 39.58 3.51
66 67 2.811431 CGTTCAAGGCTATGTTTGGACA 59.189 45.455 0.00 0.00 40.71 4.02
67 68 3.071479 TCGTTCAAGGCTATGTTTGGAC 58.929 45.455 0.00 0.00 30.93 4.02
68 69 3.410631 TCGTTCAAGGCTATGTTTGGA 57.589 42.857 0.00 0.00 0.00 3.53
69 70 3.502211 ACTTCGTTCAAGGCTATGTTTGG 59.498 43.478 0.00 0.00 36.26 3.28
70 71 4.213270 TCACTTCGTTCAAGGCTATGTTTG 59.787 41.667 0.00 0.00 36.26 2.93
71 72 4.385825 TCACTTCGTTCAAGGCTATGTTT 58.614 39.130 0.00 0.00 36.26 2.83
72 73 4.002906 TCACTTCGTTCAAGGCTATGTT 57.997 40.909 0.00 0.00 36.26 2.71
73 74 3.678056 TCACTTCGTTCAAGGCTATGT 57.322 42.857 0.00 0.00 36.26 2.29
74 75 5.352569 AGAATTCACTTCGTTCAAGGCTATG 59.647 40.000 8.44 0.00 38.98 2.23
75 76 5.352569 CAGAATTCACTTCGTTCAAGGCTAT 59.647 40.000 8.44 0.00 38.98 2.97
76 77 4.690748 CAGAATTCACTTCGTTCAAGGCTA 59.309 41.667 8.44 0.00 38.98 3.93
86 87 9.884465 ATTTTCTTTACTTCAGAATTCACTTCG 57.116 29.630 8.44 0.00 38.98 3.79
112 113 5.287674 TGCATGTTTTCCTTTGATTGGAA 57.712 34.783 0.00 0.00 41.33 3.53
119 120 9.786105 AAAATAAAGTTTGCATGTTTTCCTTTG 57.214 25.926 0.00 0.00 0.00 2.77
123 124 9.949174 AATCAAAATAAAGTTTGCATGTTTTCC 57.051 25.926 0.00 0.00 38.20 3.13
128 129 9.423061 GTCCTAATCAAAATAAAGTTTGCATGT 57.577 29.630 0.00 0.00 38.20 3.21
190 191 8.618952 CGTCAATTAAAATGAGTCGAAGAAAAC 58.381 33.333 0.00 0.00 39.69 2.43
191 192 8.339714 ACGTCAATTAAAATGAGTCGAAGAAAA 58.660 29.630 9.90 0.00 39.69 2.29
194 195 7.416154 AACGTCAATTAAAATGAGTCGAAGA 57.584 32.000 9.90 0.00 0.00 2.87
226 227 8.939201 AATCATGATGCTCGTATTTATCCTAG 57.061 34.615 9.46 0.00 0.00 3.02
232 233 8.564574 GGGTTTAAATCATGATGCTCGTATTTA 58.435 33.333 9.46 0.00 0.00 1.40
233 234 7.068103 TGGGTTTAAATCATGATGCTCGTATTT 59.932 33.333 9.46 0.37 0.00 1.40
237 238 4.269183 TGGGTTTAAATCATGATGCTCGT 58.731 39.130 9.46 0.00 0.00 4.18
276 277 9.826574 GTGTTTGAGATGGTTAGGTGTATAATA 57.173 33.333 0.00 0.00 0.00 0.98
277 278 8.325787 TGTGTTTGAGATGGTTAGGTGTATAAT 58.674 33.333 0.00 0.00 0.00 1.28
280 281 6.121776 TGTGTTTGAGATGGTTAGGTGTAT 57.878 37.500 0.00 0.00 0.00 2.29
282 283 4.389374 CTGTGTTTGAGATGGTTAGGTGT 58.611 43.478 0.00 0.00 0.00 4.16
284 285 3.394606 ACCTGTGTTTGAGATGGTTAGGT 59.605 43.478 0.00 0.00 0.00 3.08
285 286 4.021102 ACCTGTGTTTGAGATGGTTAGG 57.979 45.455 0.00 0.00 0.00 2.69
295 296 3.336468 ACGTGTGTTAACCTGTGTTTGA 58.664 40.909 2.48 0.00 35.87 2.69
296 297 3.750639 ACGTGTGTTAACCTGTGTTTG 57.249 42.857 2.48 0.00 35.87 2.93
298 299 2.420722 CCAACGTGTGTTAACCTGTGTT 59.579 45.455 2.48 0.68 36.28 3.32
299 300 2.011222 CCAACGTGTGTTAACCTGTGT 58.989 47.619 2.48 0.00 36.28 3.72
300 301 2.011222 ACCAACGTGTGTTAACCTGTG 58.989 47.619 2.48 0.00 36.28 3.66
301 302 2.406596 ACCAACGTGTGTTAACCTGT 57.593 45.000 2.48 0.00 36.28 4.00
302 303 2.223386 CCAACCAACGTGTGTTAACCTG 60.223 50.000 2.48 0.00 36.28 4.00
303 304 2.018515 CCAACCAACGTGTGTTAACCT 58.981 47.619 2.48 0.00 36.28 3.50
304 305 1.744522 ACCAACCAACGTGTGTTAACC 59.255 47.619 2.48 0.00 36.28 2.85
305 306 3.490800 AACCAACCAACGTGTGTTAAC 57.509 42.857 0.00 0.00 36.28 2.01
306 307 3.834610 CAAACCAACCAACGTGTGTTAA 58.165 40.909 2.98 0.00 36.28 2.01
307 308 2.415625 GCAAACCAACCAACGTGTGTTA 60.416 45.455 2.98 0.00 36.28 2.41
308 309 1.670380 GCAAACCAACCAACGTGTGTT 60.670 47.619 0.00 0.00 39.43 3.32
309 310 0.109039 GCAAACCAACCAACGTGTGT 60.109 50.000 0.00 0.00 0.00 3.72
310 311 1.136872 CGCAAACCAACCAACGTGTG 61.137 55.000 0.00 0.00 0.00 3.82
311 312 1.137825 CGCAAACCAACCAACGTGT 59.862 52.632 0.00 0.00 0.00 4.49
312 313 1.587613 CCGCAAACCAACCAACGTG 60.588 57.895 0.00 0.00 0.00 4.49
313 314 2.776913 CCCGCAAACCAACCAACGT 61.777 57.895 0.00 0.00 0.00 3.99
314 315 2.026879 CCCGCAAACCAACCAACG 59.973 61.111 0.00 0.00 0.00 4.10
315 316 1.362355 CTCCCGCAAACCAACCAAC 59.638 57.895 0.00 0.00 0.00 3.77
316 317 0.183014 TACTCCCGCAAACCAACCAA 59.817 50.000 0.00 0.00 0.00 3.67
317 318 0.402504 ATACTCCCGCAAACCAACCA 59.597 50.000 0.00 0.00 0.00 3.67
326 327 1.375396 GTGTGTGCATACTCCCGCA 60.375 57.895 15.05 0.00 35.30 5.69
331 332 2.738846 CTCCAACAGTGTGTGCATACTC 59.261 50.000 15.05 11.18 29.98 2.59
333 334 1.806542 CCTCCAACAGTGTGTGCATAC 59.193 52.381 6.65 6.65 0.00 2.39
336 337 0.463654 GTCCTCCAACAGTGTGTGCA 60.464 55.000 0.00 0.00 0.00 4.57
337 338 1.166531 GGTCCTCCAACAGTGTGTGC 61.167 60.000 0.00 0.00 0.00 4.57
338 339 0.535102 GGGTCCTCCAACAGTGTGTG 60.535 60.000 0.00 0.00 35.00 3.82
339 340 0.694444 AGGGTCCTCCAACAGTGTGT 60.694 55.000 0.00 0.00 38.24 3.72
340 341 1.348064 TAGGGTCCTCCAACAGTGTG 58.652 55.000 0.00 0.00 38.24 3.82
435 436 4.200283 GGAGGAGCGCGAGACAGG 62.200 72.222 12.10 0.00 0.00 4.00
451 452 1.140589 TTGTTGCTTTGGCGTGTGG 59.859 52.632 0.00 0.00 42.25 4.17
474 475 7.482169 TCAATCAGCCTATAATAGTACTGGG 57.518 40.000 5.39 0.00 32.18 4.45
484 485 8.185506 TCGTTTACCTATCAATCAGCCTATAA 57.814 34.615 0.00 0.00 0.00 0.98
552 554 1.286257 GGGAGGAAGCTTTGAAGGGAT 59.714 52.381 0.00 0.00 0.00 3.85
570 572 0.615850 GTGGAGTGGAGAAGGAAGGG 59.384 60.000 0.00 0.00 0.00 3.95
589 591 1.838913 CACGTTTGGAGCTTGTTTGG 58.161 50.000 0.00 0.00 0.00 3.28
746 756 4.401925 TCTCTCTCTCTGTGTGTCATTCA 58.598 43.478 0.00 0.00 0.00 2.57
747 757 4.699735 TCTCTCTCTCTCTGTGTGTCATTC 59.300 45.833 0.00 0.00 0.00 2.67
749 759 4.019411 TCTCTCTCTCTCTCTGTGTGTCAT 60.019 45.833 0.00 0.00 0.00 3.06
750 760 3.326297 TCTCTCTCTCTCTCTGTGTGTCA 59.674 47.826 0.00 0.00 0.00 3.58
751 761 3.935203 CTCTCTCTCTCTCTCTGTGTGTC 59.065 52.174 0.00 0.00 0.00 3.67
753 763 4.081476 TCTCTCTCTCTCTCTCTCTGTGTG 60.081 50.000 0.00 0.00 0.00 3.82
755 765 4.403752 TCTCTCTCTCTCTCTCTCTCTGTG 59.596 50.000 0.00 0.00 0.00 3.66
756 766 4.614475 TCTCTCTCTCTCTCTCTCTCTGT 58.386 47.826 0.00 0.00 0.00 3.41
757 767 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
758 768 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
759 769 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
760 770 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
761 771 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
762 772 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
763 773 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
764 774 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
765 775 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
766 776 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
767 777 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
768 778 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
769 779 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
770 780 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
771 781 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
772 782 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
773 783 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
774 784 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
775 785 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
776 786 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
777 787 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
778 788 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
779 789 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
780 790 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
781 791 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
782 792 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
783 793 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
784 794 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
785 795 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
786 796 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
787 797 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
788 798 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
789 799 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
790 800 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
791 801 4.892934 ACTCTCTCTCTCTCTCTCTCTCTC 59.107 50.000 0.00 0.00 0.00 3.20
792 802 4.877773 ACTCTCTCTCTCTCTCTCTCTCT 58.122 47.826 0.00 0.00 0.00 3.10
793 803 4.892934 AGACTCTCTCTCTCTCTCTCTCTC 59.107 50.000 0.00 0.00 0.00 3.20
797 807 4.404073 AGACAGACTCTCTCTCTCTCTCTC 59.596 50.000 0.00 0.00 0.00 3.20
882 892 3.806316 ATCAGTTTCGTTTTAGGTGCG 57.194 42.857 0.00 0.00 0.00 5.34
983 994 1.978712 TTCGTTCGTTTTGGCGTGCA 61.979 50.000 0.00 0.00 0.00 4.57
1102 1132 0.249868 CCGCATAAATCTGGGCTCGA 60.250 55.000 0.00 0.00 0.00 4.04
2237 2297 0.401395 TCTTGGGTGAAGGTGGAGGT 60.401 55.000 0.00 0.00 31.85 3.85
2336 2396 1.970092 AGTTAGCGTAGAGATCGGCT 58.030 50.000 4.28 4.28 0.00 5.52
2385 2445 5.806502 TCAGTTAAGCATATGCATTGCAAAC 59.193 36.000 28.62 24.87 43.62 2.93
2388 2448 5.299782 TCATCAGTTAAGCATATGCATTGCA 59.700 36.000 28.62 14.72 45.16 4.08
2389 2449 5.765176 TCATCAGTTAAGCATATGCATTGC 58.235 37.500 28.62 19.73 45.16 3.56
2390 2450 7.368059 ACATCATCAGTTAAGCATATGCATTG 58.632 34.615 28.62 15.15 45.16 2.82
2391 2451 7.520451 ACATCATCAGTTAAGCATATGCATT 57.480 32.000 28.62 20.34 45.16 3.56
2392 2452 7.520451 AACATCATCAGTTAAGCATATGCAT 57.480 32.000 28.62 20.02 45.16 3.96
2447 2507 6.017109 GCATTTCGGATACCATAACAATCTGT 60.017 38.462 0.00 0.00 0.00 3.41
2456 2516 2.371841 AGGCTGCATTTCGGATACCATA 59.628 45.455 0.50 0.00 0.00 2.74
2457 2517 1.143684 AGGCTGCATTTCGGATACCAT 59.856 47.619 0.50 0.00 0.00 3.55
2458 2518 0.546122 AGGCTGCATTTCGGATACCA 59.454 50.000 0.50 0.00 0.00 3.25
2460 2520 0.947244 CCAGGCTGCATTTCGGATAC 59.053 55.000 9.56 0.00 0.00 2.24
2477 2544 2.502538 CCACCCTTATAAACTCCGTCCA 59.497 50.000 0.00 0.00 0.00 4.02
2478 2545 2.502947 ACCACCCTTATAAACTCCGTCC 59.497 50.000 0.00 0.00 0.00 4.79
2479 2546 3.900966 ACCACCCTTATAAACTCCGTC 57.099 47.619 0.00 0.00 0.00 4.79
2480 2547 3.583966 TCAACCACCCTTATAAACTCCGT 59.416 43.478 0.00 0.00 0.00 4.69
2509 2576 4.289672 AGATTCCACCCTACTTGACACAAT 59.710 41.667 0.00 0.00 0.00 2.71
2591 2852 9.628500 AGGGGAGATTTATCAACATAACTTTAC 57.372 33.333 0.00 0.00 0.00 2.01
2630 2892 6.374333 ACCAAACAAGTTATGCATACTACCTG 59.626 38.462 5.74 5.81 0.00 4.00
2633 2895 9.769093 CTAAACCAAACAAGTTATGCATACTAC 57.231 33.333 5.74 2.99 0.00 2.73
2634 2896 8.455682 GCTAAACCAAACAAGTTATGCATACTA 58.544 33.333 5.74 0.00 0.00 1.82
2635 2897 7.312899 GCTAAACCAAACAAGTTATGCATACT 58.687 34.615 5.74 4.53 0.00 2.12
2636 2898 6.530181 GGCTAAACCAAACAAGTTATGCATAC 59.470 38.462 5.74 2.14 38.86 2.39
2637 2899 6.435904 AGGCTAAACCAAACAAGTTATGCATA 59.564 34.615 1.16 1.16 43.14 3.14
2640 3026 4.923281 CAGGCTAAACCAAACAAGTTATGC 59.077 41.667 0.00 0.00 43.14 3.14
2653 3039 8.496751 GTTCGAGAAATAATATCAGGCTAAACC 58.503 37.037 0.00 0.00 39.61 3.27
2654 3040 9.042008 TGTTCGAGAAATAATATCAGGCTAAAC 57.958 33.333 0.00 0.00 0.00 2.01
2696 3082 5.590259 GGAGTGATACAAATTATGCCACTGT 59.410 40.000 0.00 0.00 37.51 3.55
2697 3083 5.589855 TGGAGTGATACAAATTATGCCACTG 59.410 40.000 0.00 0.00 37.51 3.66
2758 3144 0.744771 GCTGCAGCACCCTAGGTTAC 60.745 60.000 33.36 0.00 41.59 2.50
2837 3223 3.441222 TCGCGGTATGTATGTAGTATGGG 59.559 47.826 6.13 0.00 0.00 4.00
2839 3225 5.034797 CCATCGCGGTATGTATGTAGTATG 58.965 45.833 6.13 0.00 0.00 2.39
2840 3226 4.097437 CCCATCGCGGTATGTATGTAGTAT 59.903 45.833 6.13 0.00 0.00 2.12
2847 3233 0.246635 GCTCCCATCGCGGTATGTAT 59.753 55.000 6.13 0.00 0.00 2.29
2852 3238 0.538746 TCTATGCTCCCATCGCGGTA 60.539 55.000 6.13 0.00 32.85 4.02
2938 3326 0.398318 AAGAACCAGGAGAGGTGTGC 59.602 55.000 0.00 0.00 42.25 4.57
2963 3351 6.148976 GGTTATTTAGTCTGGACAGGTTTGAC 59.851 42.308 3.51 0.00 0.00 3.18
3007 3395 6.532657 GGGACTCAAATATGCATTTCAAACTG 59.467 38.462 3.54 0.00 31.82 3.16
3011 3399 6.602410 TTGGGACTCAAATATGCATTTCAA 57.398 33.333 3.54 0.00 31.82 2.69
3027 3416 5.770162 CAGGAACTTGTCTATTTTTGGGACT 59.230 40.000 0.00 0.00 34.60 3.85
3152 3544 1.877443 GAAAAGGGTGAGCTTACGCAA 59.123 47.619 24.51 0.00 39.10 4.85
3164 3591 1.644337 GGGGGTCTATTGGAAAAGGGT 59.356 52.381 0.00 0.00 0.00 4.34
3256 3683 8.641541 ACAATAACATTCTCACCAAAAGTTGAT 58.358 29.630 0.00 0.00 0.00 2.57
3387 3898 6.349300 TCTATCTTGGCAGAGTTATTTCCAC 58.651 40.000 0.00 0.00 30.36 4.02
3401 3912 5.886960 ACAAGTTTCACATCTATCTTGGC 57.113 39.130 0.00 0.00 37.27 4.52
3457 3973 6.591834 GTGAACACTATGTTTGTCAGCTATCT 59.408 38.462 0.00 0.00 41.28 1.98
3560 4190 3.006430 TCAGTTATGAAGAAGACGTGCCA 59.994 43.478 0.00 0.00 30.61 4.92
3624 4254 2.156343 CTCAATTAGAGTAGGCGGGC 57.844 55.000 0.00 0.00 39.62 6.13
3712 4342 3.308438 TCCTTGTACAAGAACGGCTAC 57.692 47.619 32.50 0.00 40.79 3.58
3741 4371 1.447317 AAACTCAAGCAGGTGCACCG 61.447 55.000 29.68 23.87 45.16 4.94
3812 4445 2.158623 AGCAGAAATGGAGTGGACACAA 60.159 45.455 5.14 0.00 0.00 3.33
3834 4467 6.262273 GGAAACAGACACTTGAGGATTTGTTA 59.738 38.462 0.00 0.00 0.00 2.41
3843 4477 1.871080 AGCGGAAACAGACACTTGAG 58.129 50.000 0.00 0.00 0.00 3.02
3852 4486 4.466828 CACAAATCAGTTAGCGGAAACAG 58.533 43.478 3.11 0.00 0.00 3.16
3854 4488 3.365969 CCCACAAATCAGTTAGCGGAAAC 60.366 47.826 0.00 0.00 0.00 2.78
3858 4493 0.451783 GCCCACAAATCAGTTAGCGG 59.548 55.000 0.00 0.00 0.00 5.52
3862 4497 2.666272 TGTGGCCCACAAATCAGTTA 57.334 45.000 15.73 0.00 41.69 2.24
3890 4525 7.504238 TGCCCATAATATGTCGGAATTAGTTTT 59.496 33.333 0.00 0.00 0.00 2.43
3893 4528 6.121776 TGCCCATAATATGTCGGAATTAGT 57.878 37.500 0.00 0.00 0.00 2.24
3899 4534 4.042809 AGGAAATGCCCATAATATGTCGGA 59.957 41.667 0.00 0.00 37.37 4.55
4002 4639 1.300080 CCGTTTGCCTGCCACTTTG 60.300 57.895 0.00 0.00 0.00 2.77
4046 4683 2.971330 AGGCTAAGACTCATATGCTGCT 59.029 45.455 0.00 0.00 0.00 4.24
4082 4725 8.258708 GTCTATCAACCTTGGTTTATACTGAGT 58.741 37.037 1.76 0.00 0.00 3.41
4086 4729 8.925338 CCTAGTCTATCAACCTTGGTTTATACT 58.075 37.037 1.76 5.16 0.00 2.12
4087 4730 8.702819 ACCTAGTCTATCAACCTTGGTTTATAC 58.297 37.037 1.76 0.00 31.62 1.47
4112 4755 9.495572 AAGATATAGACTTAGCAGGCATAAAAC 57.504 33.333 0.00 0.00 0.00 2.43
4354 4997 5.779529 ATGAACCACATGGAAATATCTGC 57.220 39.130 4.53 0.00 37.87 4.26
4455 5104 5.019785 ACTAAATAGGGTTAGGAACAGCG 57.980 43.478 0.00 0.00 35.72 5.18
4456 5105 7.122138 AGTACTAAATAGGGTTAGGAACAGC 57.878 40.000 0.00 0.00 35.72 4.40
4459 5108 8.774546 AGGTAGTACTAAATAGGGTTAGGAAC 57.225 38.462 3.61 0.00 35.72 3.62
4463 5112 8.993404 ACAGAGGTAGTACTAAATAGGGTTAG 57.007 38.462 3.61 0.00 37.16 2.34
4471 5120 8.813951 AGCTTGTTTACAGAGGTAGTACTAAAT 58.186 33.333 3.61 0.00 0.00 1.40
4476 5125 7.754475 GTCTTAGCTTGTTTACAGAGGTAGTAC 59.246 40.741 0.00 0.00 0.00 2.73
4479 5128 5.800941 CGTCTTAGCTTGTTTACAGAGGTAG 59.199 44.000 0.00 0.00 0.00 3.18
4480 5129 5.242393 ACGTCTTAGCTTGTTTACAGAGGTA 59.758 40.000 0.00 0.00 0.00 3.08
4481 5130 4.038883 ACGTCTTAGCTTGTTTACAGAGGT 59.961 41.667 0.00 0.00 0.00 3.85
4482 5131 4.557205 ACGTCTTAGCTTGTTTACAGAGG 58.443 43.478 0.00 0.00 0.00 3.69
4483 5132 6.526566 AAACGTCTTAGCTTGTTTACAGAG 57.473 37.500 0.00 0.00 33.11 3.35
4484 5133 6.913873 AAAACGTCTTAGCTTGTTTACAGA 57.086 33.333 0.00 0.00 33.71 3.41
4485 5134 8.068893 TCTAAAACGTCTTAGCTTGTTTACAG 57.931 34.615 3.67 0.00 33.71 2.74
4486 5135 8.597662 ATCTAAAACGTCTTAGCTTGTTTACA 57.402 30.769 3.67 0.00 33.71 2.41
4487 5136 8.706035 TGATCTAAAACGTCTTAGCTTGTTTAC 58.294 33.333 3.67 0.00 33.71 2.01
4488 5137 8.706035 GTGATCTAAAACGTCTTAGCTTGTTTA 58.294 33.333 3.67 0.00 33.71 2.01
4489 5138 7.441458 AGTGATCTAAAACGTCTTAGCTTGTTT 59.559 33.333 3.67 0.00 36.17 2.83
4490 5139 6.929606 AGTGATCTAAAACGTCTTAGCTTGTT 59.070 34.615 3.67 0.00 0.00 2.83
4491 5140 6.456501 AGTGATCTAAAACGTCTTAGCTTGT 58.543 36.000 3.67 0.00 0.00 3.16
4492 5141 6.952935 AGTGATCTAAAACGTCTTAGCTTG 57.047 37.500 3.67 0.00 0.00 4.01
4493 5142 7.755822 CACTAGTGATCTAAAACGTCTTAGCTT 59.244 37.037 18.45 0.00 0.00 3.74
4494 5143 7.120873 TCACTAGTGATCTAAAACGTCTTAGCT 59.879 37.037 21.74 0.00 34.14 3.32
4495 5144 7.249147 TCACTAGTGATCTAAAACGTCTTAGC 58.751 38.462 21.74 0.00 34.14 3.09
4523 5172 9.863845 TGAGAACATCACATATAAGACGTTTTA 57.136 29.630 0.52 0.52 31.12 1.52
4524 5173 8.771920 TGAGAACATCACATATAAGACGTTTT 57.228 30.769 0.00 0.00 31.12 2.43
4525 5174 8.251026 TCTGAGAACATCACATATAAGACGTTT 58.749 33.333 0.00 0.00 33.22 3.60
4526 5175 7.772166 TCTGAGAACATCACATATAAGACGTT 58.228 34.615 0.00 0.00 33.22 3.99
4527 5176 7.334844 TCTGAGAACATCACATATAAGACGT 57.665 36.000 0.00 0.00 33.22 4.34
4528 5177 6.860539 CCTCTGAGAACATCACATATAAGACG 59.139 42.308 6.17 0.00 33.22 4.18
4529 5178 7.014711 TCCCTCTGAGAACATCACATATAAGAC 59.985 40.741 6.17 0.00 33.22 3.01
4530 5179 7.069344 TCCCTCTGAGAACATCACATATAAGA 58.931 38.462 6.17 0.00 33.22 2.10
4531 5180 7.015098 ACTCCCTCTGAGAACATCACATATAAG 59.985 40.741 6.17 0.00 44.42 1.73
4532 5181 6.841229 ACTCCCTCTGAGAACATCACATATAA 59.159 38.462 6.17 0.00 44.42 0.98
4533 5182 6.377080 ACTCCCTCTGAGAACATCACATATA 58.623 40.000 6.17 0.00 44.42 0.86
4534 5183 5.215069 ACTCCCTCTGAGAACATCACATAT 58.785 41.667 6.17 0.00 44.42 1.78
4535 5184 4.614475 ACTCCCTCTGAGAACATCACATA 58.386 43.478 6.17 0.00 44.42 2.29
4536 5185 3.448934 ACTCCCTCTGAGAACATCACAT 58.551 45.455 6.17 0.00 44.42 3.21
4537 5186 2.894731 ACTCCCTCTGAGAACATCACA 58.105 47.619 6.17 0.00 44.42 3.58
4538 5187 4.274147 TCTACTCCCTCTGAGAACATCAC 58.726 47.826 6.17 0.00 44.42 3.06
4539 5188 4.592997 TCTACTCCCTCTGAGAACATCA 57.407 45.455 6.17 0.00 44.42 3.07
4540 5189 5.385198 AGATCTACTCCCTCTGAGAACATC 58.615 45.833 6.17 0.00 44.42 3.06
4541 5190 5.402054 AGATCTACTCCCTCTGAGAACAT 57.598 43.478 6.17 0.00 44.42 2.71
4542 5191 4.871871 AGATCTACTCCCTCTGAGAACA 57.128 45.455 6.17 0.00 44.42 3.18
4543 5192 6.262273 CAGTAAGATCTACTCCCTCTGAGAAC 59.738 46.154 6.17 0.00 44.42 3.01
4544 5193 6.158871 TCAGTAAGATCTACTCCCTCTGAGAA 59.841 42.308 6.17 0.00 44.42 2.87
4545 5194 5.668080 TCAGTAAGATCTACTCCCTCTGAGA 59.332 44.000 6.17 0.00 44.42 3.27
4546 5195 6.542821 ATCAGTAAGATCTACTCCCTCTGAG 58.457 44.000 0.00 0.00 38.79 3.35
4547 5196 5.977821 TCAGTAAGATCTACTCCCTCTGA 57.022 43.478 0.00 0.61 0.00 3.27
4548 5197 7.094377 GCTAATCAGTAAGATCTACTCCCTCTG 60.094 44.444 0.00 0.00 35.39 3.35
4549 5198 6.946009 GCTAATCAGTAAGATCTACTCCCTCT 59.054 42.308 0.00 0.00 35.39 3.69
4550 5199 6.717540 TGCTAATCAGTAAGATCTACTCCCTC 59.282 42.308 0.00 0.00 35.39 4.30
4551 5200 6.615617 TGCTAATCAGTAAGATCTACTCCCT 58.384 40.000 0.00 0.00 35.39 4.20
4552 5201 6.902771 TGCTAATCAGTAAGATCTACTCCC 57.097 41.667 0.00 0.00 35.39 4.30
4553 5202 9.771534 ATTTTGCTAATCAGTAAGATCTACTCC 57.228 33.333 0.00 0.00 35.39 3.85
4566 5215 7.201496 GGAAGCACATCAAATTTTGCTAATCAG 60.201 37.037 13.92 0.00 44.57 2.90
4571 5220 5.465532 TGGAAGCACATCAAATTTTGCTA 57.534 34.783 13.92 0.00 44.57 3.49
4625 5274 1.985116 GAAGCCGACTGGTCCTCCT 60.985 63.158 0.00 0.00 37.67 3.69
4640 5289 3.186909 TGTGATTTATGCGAGGACGAAG 58.813 45.455 0.00 0.00 42.66 3.79
4642 5291 2.951457 TGTGATTTATGCGAGGACGA 57.049 45.000 0.00 0.00 42.66 4.20
4650 5299 3.040795 CGCAGCATCTTGTGATTTATGC 58.959 45.455 0.00 0.00 43.97 3.14
4659 5308 2.629656 GCCAACCGCAGCATCTTGT 61.630 57.895 0.00 0.00 37.47 3.16
4671 5320 3.209410 CAGATGGACAAGATAGCCAACC 58.791 50.000 0.00 0.00 34.95 3.77
4749 5398 0.901827 TGCCTGCTTCGGTAGATTCA 59.098 50.000 0.00 0.00 0.00 2.57
4898 5547 1.186917 TGGGAGCCTTCGTCCGTTAA 61.187 55.000 0.00 0.00 34.56 2.01
4972 5621 3.831333 GCTCATGGAGATATCCTCACTCA 59.169 47.826 8.09 0.00 43.76 3.41
5029 5678 2.783135 TGAGTTTGAGAATGAGGTGCC 58.217 47.619 0.00 0.00 0.00 5.01
5030 5679 3.365767 GCTTGAGTTTGAGAATGAGGTGC 60.366 47.826 0.00 0.00 0.00 5.01
5031 5680 3.817084 TGCTTGAGTTTGAGAATGAGGTG 59.183 43.478 0.00 0.00 0.00 4.00
5032 5681 4.070716 CTGCTTGAGTTTGAGAATGAGGT 58.929 43.478 0.00 0.00 0.00 3.85
5033 5682 4.070716 ACTGCTTGAGTTTGAGAATGAGG 58.929 43.478 0.00 0.00 0.00 3.86
5037 5689 4.965814 TGAGACTGCTTGAGTTTGAGAAT 58.034 39.130 0.00 0.00 33.83 2.40
5087 5739 4.497473 TCCTGTCGGTTTTGCTTTTATG 57.503 40.909 0.00 0.00 0.00 1.90
5105 5757 2.893489 GGTTTCCAGCAACAAGAATCCT 59.107 45.455 0.00 0.00 0.00 3.24
5112 5764 1.110442 CAGTGGGTTTCCAGCAACAA 58.890 50.000 0.00 0.00 45.05 2.83
5191 5949 2.670414 GCACTAGTACAAAGAGCTGCTG 59.330 50.000 7.01 0.00 0.00 4.41
5192 5950 2.564947 AGCACTAGTACAAAGAGCTGCT 59.435 45.455 15.82 0.00 39.09 4.24
5193 5951 2.926838 GAGCACTAGTACAAAGAGCTGC 59.073 50.000 19.68 11.18 40.37 5.25
5230 5988 6.143438 CAGAAATTTCAGCTCACAACATCAAC 59.857 38.462 19.99 0.00 0.00 3.18
5238 5996 2.950975 TGCACAGAAATTTCAGCTCACA 59.049 40.909 19.99 7.57 0.00 3.58
5262 6030 6.493116 CAGAATTCATGGTTTCATACTGCTC 58.507 40.000 8.44 0.00 31.33 4.26
5263 6031 5.163581 GCAGAATTCATGGTTTCATACTGCT 60.164 40.000 8.44 0.00 42.06 4.24
5343 6132 3.209410 AGCTGCCATTTTCGATTCTAGG 58.791 45.455 0.00 0.00 0.00 3.02
5526 6315 1.258982 GGATGTAGCGCGTTCTCAATG 59.741 52.381 8.43 0.00 0.00 2.82
5528 6317 0.800683 CGGATGTAGCGCGTTCTCAA 60.801 55.000 8.43 0.00 0.00 3.02
5541 6330 2.206635 CTCTCCTTGGAGCGGATGT 58.793 57.895 11.61 0.00 0.00 3.06
5554 6343 0.178068 TTTGCGGTATCCTGCTCTCC 59.822 55.000 0.00 0.00 0.00 3.71
5567 6360 4.057432 ACATTTTCAGGAAACATTTGCGG 58.943 39.130 0.00 0.00 33.38 5.69
5601 6394 2.500582 GAAGCTTGCTTGCGACGC 60.501 61.111 14.19 14.19 38.13 5.19
5632 6425 3.248602 GTGCTCATGTTATCCGCCTAAAG 59.751 47.826 0.00 0.00 0.00 1.85
5675 6468 0.250553 CGGCCACCAACTTACTGGAA 60.251 55.000 2.24 0.00 38.96 3.53
5730 6523 2.461695 TCCAGTCTCACTCCATTCCTC 58.538 52.381 0.00 0.00 0.00 3.71
5735 6528 4.137543 GTTTTGTTCCAGTCTCACTCCAT 58.862 43.478 0.00 0.00 0.00 3.41
5742 6535 2.687935 TGGCTTGTTTTGTTCCAGTCTC 59.312 45.455 0.00 0.00 0.00 3.36
5743 6536 2.733956 TGGCTTGTTTTGTTCCAGTCT 58.266 42.857 0.00 0.00 0.00 3.24
5807 6692 0.391661 TTTCGCTCAGAGCATCCCAC 60.392 55.000 22.49 0.00 42.58 4.61
5818 6703 1.330521 GCACTGTGAAACTTTCGCTCA 59.669 47.619 12.86 5.52 40.72 4.26
5820 6705 1.331756 CTGCACTGTGAAACTTTCGCT 59.668 47.619 12.86 0.00 40.72 4.93
5821 6706 1.746760 CTGCACTGTGAAACTTTCGC 58.253 50.000 12.86 7.95 40.51 4.70
5842 6731 3.382111 CTCGGTTGTCTGAGGGCT 58.618 61.111 0.00 0.00 41.83 5.19
5850 6739 0.541863 ATCCATCCCACTCGGTTGTC 59.458 55.000 0.00 0.00 30.27 3.18
5857 6746 2.611473 CGCTCATACATCCATCCCACTC 60.611 54.545 0.00 0.00 0.00 3.51
5858 6747 1.345741 CGCTCATACATCCATCCCACT 59.654 52.381 0.00 0.00 0.00 4.00
5859 6748 1.800805 CGCTCATACATCCATCCCAC 58.199 55.000 0.00 0.00 0.00 4.61
5860 6749 0.035317 GCGCTCATACATCCATCCCA 59.965 55.000 0.00 0.00 0.00 4.37
5862 6751 0.322975 AGGCGCTCATACATCCATCC 59.677 55.000 7.64 0.00 0.00 3.51
5863 6752 1.436600 CAGGCGCTCATACATCCATC 58.563 55.000 7.64 0.00 0.00 3.51
5875 6764 3.047877 GGTACAAACGCAGGCGCT 61.048 61.111 14.32 0.00 44.19 5.92
5876 6765 4.439472 CGGTACAAACGCAGGCGC 62.439 66.667 14.32 0.00 44.19 6.53
5877 6766 2.600475 AACGGTACAAACGCAGGCG 61.600 57.895 12.71 12.71 46.03 5.52
5878 6767 1.082366 CAACGGTACAAACGCAGGC 60.082 57.895 0.00 0.00 34.00 4.85
5879 6768 0.658897 AACAACGGTACAAACGCAGG 59.341 50.000 0.00 0.00 34.00 4.85
5880 6769 1.328069 TGAACAACGGTACAAACGCAG 59.672 47.619 0.00 0.00 34.00 5.18
5881 6770 1.366679 TGAACAACGGTACAAACGCA 58.633 45.000 0.00 0.00 34.00 5.24
5902 6791 2.952273 GGCACGTTCGCAACTTTTT 58.048 47.368 0.00 0.00 0.00 1.94
5903 6792 4.702020 GGCACGTTCGCAACTTTT 57.298 50.000 0.00 0.00 0.00 2.27
5974 6872 1.741770 GTGGTGCGACATCTGGGAC 60.742 63.158 0.00 0.00 0.00 4.46
6165 7525 8.001881 TGGATTTTTGTTCTAGCACTGTAAAA 57.998 30.769 0.00 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.