Multiple sequence alignment - TraesCS6B01G285500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G285500 chr6B 100.000 6350 0 0 1 6350 514672105 514678454 0.000000e+00 11727.0
1 TraesCS6B01G285500 chr6B 91.892 111 6 2 6165 6274 514678006 514678114 1.100000e-32 152.0
2 TraesCS6B01G285500 chr6B 91.892 111 6 2 5902 6010 514678269 514678378 1.100000e-32 152.0
3 TraesCS6B01G285500 chr6B 96.875 64 2 0 6270 6333 545182581 545182644 2.420000e-19 108.0
4 TraesCS6B01G285500 chr6D 94.883 4514 167 27 5 4500 312140890 312136423 0.000000e+00 6998.0
5 TraesCS6B01G285500 chr6D 95.881 874 31 4 4498 5366 312136259 312135386 0.000000e+00 1410.0
6 TraesCS6B01G285500 chr6D 91.158 803 51 9 5364 6157 312135422 312134631 0.000000e+00 1072.0
7 TraesCS6B01G285500 chr6D 94.595 111 5 1 6165 6274 312134887 312134777 3.040000e-38 171.0
8 TraesCS6B01G285500 chr6A 94.784 4026 155 28 359 4366 448664761 448660773 0.000000e+00 6220.0
9 TraesCS6B01G285500 chr6A 94.411 823 41 2 4537 5356 448660623 448659803 0.000000e+00 1260.0
10 TraesCS6B01G285500 chr6A 90.219 777 58 9 5386 6157 448659816 448659053 0.000000e+00 998.0
11 TraesCS6B01G285500 chr6A 92.899 338 7 10 3 325 448665429 448665094 5.760000e-130 475.0
12 TraesCS6B01G285500 chr6A 93.043 115 7 1 6165 6278 448659306 448659192 3.940000e-37 167.0
13 TraesCS6B01G285500 chr6A 93.750 48 3 0 4491 4538 311856948 311856995 8.830000e-09 73.1
14 TraesCS6B01G285500 chr6A 97.561 41 1 0 6007 6047 203599942 203599982 3.180000e-08 71.3
15 TraesCS6B01G285500 chr2D 72.733 1687 346 91 1634 3272 489642252 489640632 4.480000e-126 462.0
16 TraesCS6B01G285500 chr2D 87.952 83 6 4 6251 6333 116388508 116388430 1.880000e-15 95.3
17 TraesCS6B01G285500 chr2A 72.994 1259 248 75 1609 2829 633233388 633232184 2.180000e-94 357.0
18 TraesCS6B01G285500 chr2B 96.970 66 2 0 6268 6333 236864293 236864358 1.870000e-20 111.0
19 TraesCS6B01G285500 chr1A 94.286 70 4 0 6264 6333 518009501 518009432 2.420000e-19 108.0
20 TraesCS6B01G285500 chr1A 93.750 48 3 0 4491 4538 481924467 481924420 8.830000e-09 73.1
21 TraesCS6B01G285500 chr7D 92.000 75 6 0 6259 6333 123147847 123147773 8.710000e-19 106.0
22 TraesCS6B01G285500 chr7D 89.873 79 4 4 6255 6333 89449511 89449585 1.460000e-16 99.0
23 TraesCS6B01G285500 chr7D 93.182 44 3 0 5997 6040 121788122 121788165 1.480000e-06 65.8
24 TraesCS6B01G285500 chr3B 95.455 66 3 0 6268 6333 326997372 326997307 8.710000e-19 106.0
25 TraesCS6B01G285500 chr5B 90.789 76 6 1 6258 6333 57427268 57427342 4.050000e-17 100.0
26 TraesCS6B01G285500 chr5B 95.833 48 2 0 4491 4538 641096488 641096441 1.900000e-10 78.7
27 TraesCS6B01G285500 chr5B 93.478 46 3 0 4492 4537 176590586 176590631 1.140000e-07 69.4
28 TraesCS6B01G285500 chr5B 89.362 47 5 0 6003 6049 55039915 55039961 6.880000e-05 60.2
29 TraesCS6B01G285500 chr5D 87.952 83 6 4 6251 6333 482725334 482725256 1.880000e-15 95.3
30 TraesCS6B01G285500 chr5D 93.617 47 3 0 4491 4537 164605993 164606039 3.180000e-08 71.3
31 TraesCS6B01G285500 chr5D 92.000 50 3 1 6006 6055 134780600 134780552 1.140000e-07 69.4
32 TraesCS6B01G285500 chr3D 92.157 51 4 0 4491 4541 27575834 27575884 8.830000e-09 73.1
33 TraesCS6B01G285500 chr7B 90.566 53 5 0 4486 4538 544480068 544480120 3.180000e-08 71.3
34 TraesCS6B01G285500 chr7B 87.500 56 5 2 6000 6054 566635051 566634997 5.310000e-06 63.9
35 TraesCS6B01G285500 chr3A 91.667 48 4 0 5999 6046 52348388 52348341 4.110000e-07 67.6
36 TraesCS6B01G285500 chr1D 91.837 49 3 1 5998 6046 458201034 458201081 4.110000e-07 67.6
37 TraesCS6B01G285500 chr4A 85.938 64 6 1 4477 4540 441758974 441758914 1.480000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G285500 chr6B 514672105 514678454 6349 False 4010.333333 11727 94.594667 1 6350 3 chr6B.!!$F2 6349
1 TraesCS6B01G285500 chr6D 312134631 312140890 6259 True 2412.750000 6998 94.129250 5 6274 4 chr6D.!!$R1 6269
2 TraesCS6B01G285500 chr6A 448659053 448665429 6376 True 1824.000000 6220 93.071200 3 6278 5 chr6A.!!$R1 6275
3 TraesCS6B01G285500 chr2D 489640632 489642252 1620 True 462.000000 462 72.733000 1634 3272 1 chr2D.!!$R2 1638
4 TraesCS6B01G285500 chr2A 633232184 633233388 1204 True 357.000000 357 72.994000 1609 2829 1 chr2A.!!$R1 1220

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
976 1295 0.614979 TGTAGGGAGAGGTGCTGGAC 60.615 60.000 0.00 0.0 0.0 4.02 F
1849 2184 0.470766 ACGGGCAAACAAGTAGTGGA 59.529 50.000 0.00 0.0 0.0 4.02 F
3109 3499 0.400213 TCGGGAGTTGTGCAAAGGAT 59.600 50.000 0.00 0.0 0.0 3.24 F
3769 4163 1.939934 CGTTTGTCTTTGTCAGCTGGA 59.060 47.619 15.13 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2601 2967 0.981183 CCACACTAGCCACAAGGGTA 59.019 55.0 0.00 0.0 45.70 3.69 R
3631 4025 0.189574 TTGGGGGCATTCCAACAGAA 59.810 50.0 2.71 0.0 39.15 3.02 R
3925 4319 0.951558 ATGGGTTGCGTGTTGAAGAC 59.048 50.0 0.00 0.0 0.00 3.01 R
5365 5956 0.035439 TCAGCCAAAACGAGGGGATC 60.035 55.0 0.00 0.0 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.627864 AAAACATAAAGGGCCTGCGT 58.372 45.000 6.92 0.00 0.00 5.24
68 69 4.734695 GCAAGATCATTGAAAACGATCCCC 60.735 45.833 8.52 0.00 36.95 4.81
310 326 1.152963 AATCCCCCGCCAGAAATCG 60.153 57.895 0.00 0.00 0.00 3.34
311 327 3.774599 ATCCCCCGCCAGAAATCGC 62.775 63.158 0.00 0.00 0.00 4.58
357 373 3.222354 AAACGTCGCTTCCTCGCCT 62.222 57.895 0.00 0.00 0.00 5.52
473 791 0.996762 GAGGGGAGGAGAGGAGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
623 942 1.789523 CTCGGGAAGGAGGATGGTTA 58.210 55.000 0.00 0.00 0.00 2.85
891 1210 6.712241 TCTTGTCTGCTTCTTCTTTATTCG 57.288 37.500 0.00 0.00 0.00 3.34
938 1257 4.780815 TCTTGGCTGTGGTCTTATAATGG 58.219 43.478 0.00 0.00 0.00 3.16
939 1258 2.930950 TGGCTGTGGTCTTATAATGGC 58.069 47.619 0.00 0.00 0.00 4.40
976 1295 0.614979 TGTAGGGAGAGGTGCTGGAC 60.615 60.000 0.00 0.00 0.00 4.02
995 1316 1.615424 GGGGCAGGTAAGTGGGAGA 60.615 63.158 0.00 0.00 0.00 3.71
1050 1371 2.372264 CAGTGGGACAAGATGAATGGG 58.628 52.381 0.00 0.00 44.16 4.00
1053 1374 1.103398 GGGACAAGATGAATGGGGCG 61.103 60.000 0.00 0.00 0.00 6.13
1074 1395 3.061848 GTGGTGAATGGCGGTGGG 61.062 66.667 0.00 0.00 0.00 4.61
1249 1570 2.029470 CCAACCGCATACACATTTGGTT 60.029 45.455 0.00 0.00 40.16 3.67
1254 1575 3.687212 CCGCATACACATTTGGTTAGTGA 59.313 43.478 0.00 0.00 37.05 3.41
1255 1576 4.201812 CCGCATACACATTTGGTTAGTGAG 60.202 45.833 0.00 0.00 37.05 3.51
1258 1579 5.674569 GCATACACATTTGGTTAGTGAGCTG 60.675 44.000 0.00 0.00 37.05 4.24
1260 1581 3.565482 ACACATTTGGTTAGTGAGCTGTG 59.435 43.478 0.00 4.18 36.25 3.66
1261 1582 3.565482 CACATTTGGTTAGTGAGCTGTGT 59.435 43.478 0.00 0.00 35.33 3.72
1262 1583 4.036734 CACATTTGGTTAGTGAGCTGTGTT 59.963 41.667 0.00 0.00 35.33 3.32
1263 1584 4.275936 ACATTTGGTTAGTGAGCTGTGTTC 59.724 41.667 0.00 0.00 0.00 3.18
1264 1585 3.838244 TTGGTTAGTGAGCTGTGTTCT 57.162 42.857 0.00 0.00 0.00 3.01
1265 1586 3.111853 TGGTTAGTGAGCTGTGTTCTG 57.888 47.619 0.00 0.00 0.00 3.02
1266 1587 1.801178 GGTTAGTGAGCTGTGTTCTGC 59.199 52.381 0.00 0.00 38.51 4.26
1274 1595 2.923121 AGCTGTGTTCTGCTCTTTTCA 58.077 42.857 0.00 0.00 43.54 2.69
1275 1596 3.484407 AGCTGTGTTCTGCTCTTTTCAT 58.516 40.909 0.00 0.00 43.54 2.57
1276 1597 3.252701 AGCTGTGTTCTGCTCTTTTCATG 59.747 43.478 0.00 0.00 43.54 3.07
1277 1598 3.562505 CTGTGTTCTGCTCTTTTCATGC 58.437 45.455 0.00 0.00 0.00 4.06
1278 1599 3.216800 TGTGTTCTGCTCTTTTCATGCT 58.783 40.909 0.00 0.00 0.00 3.79
1316 1637 5.850557 TTTTCATTGCTCTGGTTCTTCAA 57.149 34.783 0.00 0.00 0.00 2.69
1321 1642 5.591472 TCATTGCTCTGGTTCTTCAATATGG 59.409 40.000 0.00 0.00 0.00 2.74
1350 1671 5.767816 AGTTTGTACTACTGCTTTTTGGG 57.232 39.130 0.00 0.00 31.21 4.12
1352 1673 5.889289 AGTTTGTACTACTGCTTTTTGGGAA 59.111 36.000 0.00 0.00 31.21 3.97
1357 1678 5.869649 ACTACTGCTTTTTGGGAACATTT 57.130 34.783 0.00 0.00 42.32 2.32
1373 1694 6.813152 GGGAACATTTTTCATAACACCTGATG 59.187 38.462 0.00 0.00 0.00 3.07
1374 1695 7.378181 GGAACATTTTTCATAACACCTGATGT 58.622 34.615 0.00 0.00 46.42 3.06
1375 1696 8.519526 GGAACATTTTTCATAACACCTGATGTA 58.480 33.333 0.00 0.00 42.31 2.29
1376 1697 9.559958 GAACATTTTTCATAACACCTGATGTAG 57.440 33.333 0.00 0.00 42.31 2.74
1377 1698 8.862325 ACATTTTTCATAACACCTGATGTAGA 57.138 30.769 0.00 0.00 42.31 2.59
1433 1754 9.874205 CAAACATCATATTTCCCTACACAATTT 57.126 29.630 0.00 0.00 0.00 1.82
1447 1768 8.612619 CCCTACACAATTTCATGTATACTTGAC 58.387 37.037 18.30 0.00 31.10 3.18
1450 1771 8.094798 ACACAATTTCATGTATACTTGACGTT 57.905 30.769 18.30 13.58 31.00 3.99
1485 1820 9.964354 TGCATAGTGATTATGGCTTTATCTATT 57.036 29.630 0.00 0.00 39.67 1.73
1517 1852 9.912634 CTTACTGTTTAAATCATTCCAATGTGT 57.087 29.630 0.00 0.00 37.65 3.72
1534 1869 7.176515 TCCAATGTGTTCAATTGCTATGTAAGT 59.823 33.333 0.00 0.00 0.00 2.24
1541 1876 9.317936 TGTTCAATTGCTATGTAAGTATCTCAG 57.682 33.333 0.00 0.00 0.00 3.35
1542 1877 8.768955 GTTCAATTGCTATGTAAGTATCTCAGG 58.231 37.037 0.00 0.00 0.00 3.86
1544 1879 9.143155 TCAATTGCTATGTAAGTATCTCAGGTA 57.857 33.333 0.00 0.00 0.00 3.08
1548 1883 8.534954 TGCTATGTAAGTATCTCAGGTAAGTT 57.465 34.615 0.00 0.00 0.00 2.66
1550 1885 8.414778 GCTATGTAAGTATCTCAGGTAAGTTGT 58.585 37.037 0.00 0.00 0.00 3.32
1567 1902 7.392393 GGTAAGTTGTGGTCATTAGTTGGTAAT 59.608 37.037 0.00 0.00 0.00 1.89
1571 1906 8.818860 AGTTGTGGTCATTAGTTGGTAATACTA 58.181 33.333 0.00 0.00 29.54 1.82
1572 1907 9.095065 GTTGTGGTCATTAGTTGGTAATACTAG 57.905 37.037 0.00 0.00 29.54 2.57
1602 1937 4.970711 TGGTTCCATTTTCCTAACGTGTA 58.029 39.130 0.00 0.00 0.00 2.90
1605 1940 5.220529 GGTTCCATTTTCCTAACGTGTATCG 60.221 44.000 0.00 0.00 46.00 2.92
1740 2075 5.278266 GGCATTAACTGTGAGTGCAAACTAA 60.278 40.000 13.84 0.00 37.53 2.24
1751 2086 5.576384 TGAGTGCAAACTAAACAAAAGCTTG 59.424 36.000 0.00 0.00 38.61 4.01
1758 2093 5.156804 ACTAAACAAAAGCTTGTGAGTCG 57.843 39.130 23.64 10.65 45.25 4.18
1803 2138 6.798959 GCATTTGAACTAAATCAGAGTGTGTC 59.201 38.462 0.00 0.00 36.87 3.67
1849 2184 0.470766 ACGGGCAAACAAGTAGTGGA 59.529 50.000 0.00 0.00 0.00 4.02
1986 2321 4.333372 TCGGTTGTTACAAAGTCCTCAAAC 59.667 41.667 0.00 0.00 0.00 2.93
2030 2370 2.670414 GGAGAGAGCATTCGTGTTGAAG 59.330 50.000 0.00 0.00 40.65 3.02
2125 2465 5.848286 TGGGATGATGCAGAGGTAATAAT 57.152 39.130 0.00 0.00 0.00 1.28
2150 2491 7.713764 ATGTTCTTTTTCAGCATTGTTAACC 57.286 32.000 2.48 0.00 0.00 2.85
2190 2532 3.806380 TGTTTGCTAACCGGTTTAGTGA 58.194 40.909 27.64 5.76 39.69 3.41
2267 2609 1.380302 CTGGAACCACCTCAAGGGG 59.620 63.158 0.29 0.00 40.27 4.79
2276 2618 2.379005 CACCTCAAGGGGCTTATTTCC 58.621 52.381 0.29 0.00 40.27 3.13
2330 2672 5.484173 GCAGCTTGCATATTGTGTAACTA 57.516 39.130 0.00 0.00 44.26 2.24
2389 2731 6.535150 TGATTGTAATAGCTCAAAGGAGAACG 59.465 38.462 0.00 0.00 44.26 3.95
2501 2867 6.483307 ACTTTGATGTATATGTGTCCCATTCG 59.517 38.462 0.00 0.00 34.86 3.34
2536 2902 3.364621 GCATGTTTGCTGACCGTTTAATG 59.635 43.478 0.00 0.00 45.77 1.90
2601 2967 5.888982 TCTTAGGAAAGGACAAGTCAACT 57.111 39.130 2.29 0.00 33.22 3.16
2634 3000 1.414919 AGTGTGGTAAGAAAGACGCCA 59.585 47.619 0.00 0.00 0.00 5.69
2686 3052 6.992715 AGAAAGAGTGTAAGCGGCAATTATAT 59.007 34.615 1.45 0.00 0.00 0.86
2842 3219 2.895404 AGGTTGCAAATTCAGCTCACAT 59.105 40.909 0.00 0.00 0.00 3.21
2921 3298 6.446318 GGATTGTTAGTTGCTGACATTTCAA 58.554 36.000 0.00 0.00 30.40 2.69
2922 3299 6.583806 GGATTGTTAGTTGCTGACATTTCAAG 59.416 38.462 0.00 0.00 30.40 3.02
2924 3301 4.580167 TGTTAGTTGCTGACATTTCAAGCT 59.420 37.500 0.00 0.00 31.12 3.74
2927 3304 4.614946 AGTTGCTGACATTTCAAGCTTTC 58.385 39.130 0.00 0.00 31.12 2.62
2974 3364 2.352651 TGCACACGTACCGTATAGAGAC 59.647 50.000 0.00 0.00 38.32 3.36
3085 3475 6.094603 ACATTGAGCAATCAAGGAATACACTC 59.905 38.462 9.36 0.00 35.29 3.51
3109 3499 0.400213 TCGGGAGTTGTGCAAAGGAT 59.600 50.000 0.00 0.00 0.00 3.24
3124 3514 5.102313 GCAAAGGATGTAGTTACAAATGCC 58.898 41.667 0.00 0.00 39.99 4.40
3145 3535 3.016736 CCAGGTTAATGTGGTCATGTCC 58.983 50.000 1.55 1.55 34.19 4.02
3172 3562 8.970691 ATAAAACACTAGTTAAGCATTTGCAG 57.029 30.769 5.20 0.00 39.45 4.41
3530 3920 5.925969 CCAAAGCACCAGGTATTTTTACTTG 59.074 40.000 0.00 0.00 0.00 3.16
3561 3951 7.393515 ACTTCTAGTTATTACCTTTTGGCCTTG 59.606 37.037 3.32 0.00 45.59 3.61
3587 3981 6.530019 ACTCCAACACTGATTTGTTTTCTT 57.470 33.333 0.00 0.00 37.62 2.52
3631 4025 2.354203 GCGTTCAATCAGAAGTCCTCCT 60.354 50.000 0.00 0.00 36.78 3.69
3737 4131 4.433186 TGTATTGAGCCAAATGAAACGG 57.567 40.909 0.00 0.00 0.00 4.44
3769 4163 1.939934 CGTTTGTCTTTGTCAGCTGGA 59.060 47.619 15.13 0.00 0.00 3.86
3848 4242 2.555757 ACAGCTTCAGTGAATTCAAGGC 59.444 45.455 10.35 7.16 0.00 4.35
3925 4319 6.937465 GGCCTTTTATCACTAAAGATCTAGGG 59.063 42.308 0.00 0.00 35.16 3.53
4117 4511 2.744787 CATTGAACTACGATGCAGGC 57.255 50.000 0.00 0.00 34.18 4.85
4348 4742 3.412386 ACCTGAAAGAAAATGGGAGTCG 58.588 45.455 0.00 0.00 34.07 4.18
4393 4804 8.194104 TGTTTGCTGCAGTTTATTTTCTAAGAA 58.806 29.630 16.64 0.00 0.00 2.52
4416 4827 7.662669 AGAAAGGTGATGAAAATTTGGAAATGG 59.337 33.333 0.00 0.00 0.00 3.16
4418 4829 6.840527 AGGTGATGAAAATTTGGAAATGGTT 58.159 32.000 0.00 0.00 0.00 3.67
4455 4873 7.229581 TGATGACTCCTTGAGATCTATCATG 57.770 40.000 0.00 0.00 33.32 3.07
4465 4883 4.088634 GAGATCTATCATGAGCAGGTCCT 58.911 47.826 14.00 6.63 0.00 3.85
4468 4886 6.262980 AGATCTATCATGAGCAGGTCCTTAT 58.737 40.000 14.00 0.00 0.00 1.73
4469 4887 7.417554 AGATCTATCATGAGCAGGTCCTTATA 58.582 38.462 14.00 0.00 0.00 0.98
4470 4888 6.842437 TCTATCATGAGCAGGTCCTTATAC 57.158 41.667 0.09 0.00 0.00 1.47
4500 4918 9.342308 CATACTACATCTGTCCCAAAATTGTAT 57.658 33.333 0.00 0.00 0.00 2.29
4512 5096 7.220108 GTCCCAAAATTGTATTAAATCAGCGAC 59.780 37.037 0.00 0.00 0.00 5.19
4530 5114 3.267483 CGACACTTATTTTGGGACGGAT 58.733 45.455 0.00 0.00 0.00 4.18
4560 5144 9.017669 GTAGATCTGCTGAAATGCTTTATTTTG 57.982 33.333 5.18 0.00 39.06 2.44
4790 5374 3.274288 GTTCAAAGGAGAATCAGCCGAT 58.726 45.455 0.00 0.00 36.25 4.18
4922 5506 2.690326 GAGGTACGCGGCAATCATT 58.310 52.632 12.47 0.00 0.00 2.57
4923 5507 0.304705 GAGGTACGCGGCAATCATTG 59.695 55.000 12.47 0.00 0.00 2.82
4926 5510 2.139917 GGTACGCGGCAATCATTGATA 58.860 47.619 12.47 0.00 0.00 2.15
4939 5523 9.013229 GGCAATCATTGATACACCAATTATCTA 57.987 33.333 0.00 0.00 34.77 1.98
4952 5536 9.951866 ACACCAATTATCTATATTCCCCTTTTT 57.048 29.630 0.00 0.00 0.00 1.94
5083 5674 2.866085 GATGCAGAAGCGGCTGTCCT 62.866 60.000 1.81 0.00 46.23 3.85
5181 5772 2.640302 GCTGTGGACGGAGAGCAGA 61.640 63.158 0.00 0.00 0.00 4.26
5340 5931 0.615261 GGAGATACGGGATCCCCTCC 60.615 65.000 28.25 28.25 42.67 4.30
5356 5947 2.692041 CCCTCCTTTGGCTGATTGATTC 59.308 50.000 0.00 0.00 0.00 2.52
5365 5956 3.639561 TGGCTGATTGATTCATGATTGGG 59.360 43.478 0.00 0.00 32.72 4.12
5366 5957 3.893200 GGCTGATTGATTCATGATTGGGA 59.107 43.478 0.00 0.00 32.72 4.37
5367 5958 4.527038 GGCTGATTGATTCATGATTGGGAT 59.473 41.667 0.00 0.00 32.72 3.85
5368 5959 5.336531 GGCTGATTGATTCATGATTGGGATC 60.337 44.000 0.00 0.00 32.72 3.36
5369 5960 5.336531 GCTGATTGATTCATGATTGGGATCC 60.337 44.000 1.92 1.92 32.72 3.36
5370 5961 5.081728 TGATTGATTCATGATTGGGATCCC 58.918 41.667 25.22 25.22 0.00 3.85
5371 5962 3.530928 TGATTCATGATTGGGATCCCC 57.469 47.619 28.58 13.44 45.71 4.81
5372 5963 3.065940 TGATTCATGATTGGGATCCCCT 58.934 45.455 28.58 15.61 45.70 4.79
5373 5964 3.074985 TGATTCATGATTGGGATCCCCTC 59.925 47.826 28.58 23.18 45.70 4.30
5374 5965 1.059098 TCATGATTGGGATCCCCTCG 58.941 55.000 28.58 12.52 45.70 4.63
5375 5966 0.767375 CATGATTGGGATCCCCTCGT 59.233 55.000 28.58 21.40 45.70 4.18
5376 5967 1.143684 CATGATTGGGATCCCCTCGTT 59.856 52.381 28.58 12.90 45.70 3.85
5377 5968 1.295020 TGATTGGGATCCCCTCGTTT 58.705 50.000 28.58 6.14 45.70 3.60
5378 5969 1.638589 TGATTGGGATCCCCTCGTTTT 59.361 47.619 28.58 4.66 45.70 2.43
5379 5970 2.024414 GATTGGGATCCCCTCGTTTTG 58.976 52.381 28.58 0.00 45.70 2.44
5380 5971 0.039035 TTGGGATCCCCTCGTTTTGG 59.961 55.000 28.58 0.00 45.70 3.28
5381 5972 1.753078 GGGATCCCCTCGTTTTGGC 60.753 63.158 21.42 0.00 41.34 4.52
5382 5973 1.303282 GGATCCCCTCGTTTTGGCT 59.697 57.895 0.00 0.00 0.00 4.75
5383 5974 1.032114 GGATCCCCTCGTTTTGGCTG 61.032 60.000 0.00 0.00 0.00 4.85
5384 5975 0.035439 GATCCCCTCGTTTTGGCTGA 60.035 55.000 0.00 0.00 0.00 4.26
5385 5976 0.625849 ATCCCCTCGTTTTGGCTGAT 59.374 50.000 0.00 0.00 0.00 2.90
5386 5977 0.404040 TCCCCTCGTTTTGGCTGATT 59.596 50.000 0.00 0.00 0.00 2.57
5387 5978 0.527565 CCCCTCGTTTTGGCTGATTG 59.472 55.000 0.00 0.00 0.00 2.67
5388 5979 0.527565 CCCTCGTTTTGGCTGATTGG 59.472 55.000 0.00 0.00 0.00 3.16
5389 5980 1.247567 CCTCGTTTTGGCTGATTGGT 58.752 50.000 0.00 0.00 0.00 3.67
5390 5981 1.613437 CCTCGTTTTGGCTGATTGGTT 59.387 47.619 0.00 0.00 0.00 3.67
5391 5982 2.607771 CCTCGTTTTGGCTGATTGGTTG 60.608 50.000 0.00 0.00 0.00 3.77
5392 5983 2.293122 CTCGTTTTGGCTGATTGGTTGA 59.707 45.455 0.00 0.00 0.00 3.18
5393 5984 2.890311 TCGTTTTGGCTGATTGGTTGAT 59.110 40.909 0.00 0.00 0.00 2.57
5394 5985 2.988493 CGTTTTGGCTGATTGGTTGATG 59.012 45.455 0.00 0.00 0.00 3.07
5404 5995 2.988636 TTGGTTGATGATTGGGTCCA 57.011 45.000 0.00 0.00 0.00 4.02
5488 6083 1.548719 GGTGGTTTTGTATCTTGGGGC 59.451 52.381 0.00 0.00 0.00 5.80
5520 6115 7.815383 TGTTCTGATTTTCCATAGGGTATCAT 58.185 34.615 8.34 0.00 31.88 2.45
5521 6116 8.944138 TGTTCTGATTTTCCATAGGGTATCATA 58.056 33.333 8.34 1.64 31.88 2.15
5522 6117 9.965902 GTTCTGATTTTCCATAGGGTATCATAT 57.034 33.333 8.34 0.00 31.88 1.78
5524 6119 9.337714 TCTGATTTTCCATAGGGTATCATATCA 57.662 33.333 8.34 0.00 31.88 2.15
5558 6153 1.821666 CGGGGGTTTTGATCTTGGTGT 60.822 52.381 0.00 0.00 0.00 4.16
5577 6172 0.616371 TATGCCCTTTGCGTGTAGGT 59.384 50.000 0.00 0.00 45.60 3.08
5578 6173 0.616371 ATGCCCTTTGCGTGTAGGTA 59.384 50.000 0.00 0.00 45.60 3.08
5582 6177 1.625616 CCTTTGCGTGTAGGTAGACG 58.374 55.000 2.48 2.48 44.57 4.18
5607 6202 2.590291 TGCGCGGTTTCTGAGCAA 60.590 55.556 8.83 0.00 34.66 3.91
5642 6237 7.850982 GGTCTGATTGCTAACATTATTAACGTG 59.149 37.037 0.00 0.00 0.00 4.49
5683 6278 2.029970 ACGCTCTTGTGTTAACGTGTTG 59.970 45.455 0.26 0.00 32.25 3.33
5684 6279 2.029970 CGCTCTTGTGTTAACGTGTTGT 59.970 45.455 0.26 0.00 0.00 3.32
5685 6280 3.484557 CGCTCTTGTGTTAACGTGTTGTT 60.485 43.478 0.26 0.00 44.78 2.83
5692 6287 3.669122 GTGTTAACGTGTTGTTGTTGCAA 59.331 39.130 0.00 0.00 42.01 4.08
5714 6309 2.631428 CACGGTTTGCACCACTCG 59.369 61.111 0.00 0.00 44.53 4.18
5734 6329 4.196193 TCGTCTGTCAGAAATGGTTGTTT 58.804 39.130 3.51 0.00 0.00 2.83
5744 6339 5.851177 CAGAAATGGTTGTTTCGATGTGTAC 59.149 40.000 0.00 0.00 41.74 2.90
5746 6341 3.195471 TGGTTGTTTCGATGTGTACCA 57.805 42.857 0.00 0.00 32.16 3.25
5748 6343 3.562141 TGGTTGTTTCGATGTGTACCAAG 59.438 43.478 0.00 0.00 31.71 3.61
5764 6359 5.637810 TGTACCAAGAGCTTGTAGAAAATCG 59.362 40.000 9.18 0.00 38.85 3.34
5799 6394 4.996434 GCAGCCACCACAGCGAGT 62.996 66.667 0.00 0.00 34.64 4.18
5800 6395 2.740055 CAGCCACCACAGCGAGTC 60.740 66.667 0.00 0.00 34.64 3.36
5894 6489 1.910819 GTTGTGTGCGTGTTGTTTCTG 59.089 47.619 0.00 0.00 0.00 3.02
5929 6524 1.063806 CTGTTCTTCTCAAGCGGACG 58.936 55.000 0.00 0.00 0.00 4.79
5982 6579 3.057736 CAGTGTGATCCTTTTCAGCCAAG 60.058 47.826 0.00 0.00 0.00 3.61
5998 6595 3.713764 AGCCAAGACCTGAATGCTACTAT 59.286 43.478 0.00 0.00 0.00 2.12
6002 6599 6.370166 GCCAAGACCTGAATGCTACTATTATC 59.630 42.308 0.00 0.00 0.00 1.75
6004 6601 8.099537 CCAAGACCTGAATGCTACTATTATCAT 58.900 37.037 0.00 0.00 0.00 2.45
6061 6658 4.100035 AGGTCACTGATAGATCAATGCGAA 59.900 41.667 0.00 0.00 34.31 4.70
6069 6666 7.928167 ACTGATAGATCAATGCGAATACTCAAA 59.072 33.333 0.00 0.00 36.18 2.69
6077 6674 3.334691 TGCGAATACTCAAAAGTCCAGG 58.665 45.455 0.00 0.00 36.92 4.45
6122 6720 6.662755 TCATATACATTCAGTGCCCTTTTCT 58.337 36.000 0.00 0.00 0.00 2.52
6150 6748 4.202609 ACAAATCTCCCTTTCACATGTCCT 60.203 41.667 0.00 0.00 0.00 3.85
6157 6755 4.003648 CCCTTTCACATGTCCTAGAACAC 58.996 47.826 0.00 0.00 30.55 3.32
6158 6756 4.263068 CCCTTTCACATGTCCTAGAACACT 60.263 45.833 0.00 0.00 30.55 3.55
6159 6757 4.692625 CCTTTCACATGTCCTAGAACACTG 59.307 45.833 0.00 0.00 30.55 3.66
6160 6758 4.955811 TTCACATGTCCTAGAACACTGT 57.044 40.909 0.00 0.00 30.55 3.55
6161 6759 4.257267 TCACATGTCCTAGAACACTGTG 57.743 45.455 14.26 14.26 38.54 3.66
6162 6760 3.895041 TCACATGTCCTAGAACACTGTGA 59.105 43.478 15.86 17.18 40.81 3.58
6163 6761 4.343814 TCACATGTCCTAGAACACTGTGAA 59.656 41.667 18.15 7.95 40.52 3.18
6164 6762 5.012046 TCACATGTCCTAGAACACTGTGAAT 59.988 40.000 18.15 2.49 40.52 2.57
6165 6763 6.210584 TCACATGTCCTAGAACACTGTGAATA 59.789 38.462 18.15 3.32 40.52 1.75
6166 6764 6.311445 CACATGTCCTAGAACACTGTGAATAC 59.689 42.308 15.86 2.86 38.97 1.89
6167 6765 6.211584 ACATGTCCTAGAACACTGTGAATACT 59.788 38.462 15.86 9.77 30.55 2.12
6168 6766 6.025749 TGTCCTAGAACACTGTGAATACTG 57.974 41.667 15.86 0.00 0.00 2.74
6169 6767 5.538813 TGTCCTAGAACACTGTGAATACTGT 59.461 40.000 15.86 0.00 39.24 3.55
6170 6768 6.041637 TGTCCTAGAACACTGTGAATACTGTT 59.958 38.462 15.86 0.00 36.93 3.16
6171 6769 6.929606 GTCCTAGAACACTGTGAATACTGTTT 59.070 38.462 15.86 0.00 36.93 2.83
6172 6770 7.441458 GTCCTAGAACACTGTGAATACTGTTTT 59.559 37.037 15.86 0.00 36.93 2.43
6173 6771 7.656137 TCCTAGAACACTGTGAATACTGTTTTC 59.344 37.037 15.86 4.48 41.67 2.29
6175 6773 7.251704 AGAACACTGTGAATACTGTTTTCTG 57.748 36.000 15.86 4.99 45.68 3.02
6176 6774 6.823689 AGAACACTGTGAATACTGTTTTCTGT 59.176 34.615 15.86 5.51 45.68 3.41
6177 6775 7.336931 AGAACACTGTGAATACTGTTTTCTGTT 59.663 33.333 15.86 12.57 45.68 3.16
6178 6776 7.016361 ACACTGTGAATACTGTTTTCTGTTC 57.984 36.000 15.86 2.53 36.93 3.18
6179 6777 6.823689 ACACTGTGAATACTGTTTTCTGTTCT 59.176 34.615 15.86 0.00 36.93 3.01
6180 6778 7.336931 ACACTGTGAATACTGTTTTCTGTTCTT 59.663 33.333 15.86 0.00 36.93 2.52
6181 6779 7.852945 CACTGTGAATACTGTTTTCTGTTCTTC 59.147 37.037 0.32 0.00 36.93 2.87
6182 6780 7.770897 ACTGTGAATACTGTTTTCTGTTCTTCT 59.229 33.333 11.35 0.00 35.74 2.85
6183 6781 8.142994 TGTGAATACTGTTTTCTGTTCTTCTC 57.857 34.615 11.35 0.00 34.05 2.87
6184 6782 7.768582 TGTGAATACTGTTTTCTGTTCTTCTCA 59.231 33.333 11.35 0.00 34.05 3.27
6185 6783 8.612619 GTGAATACTGTTTTCTGTTCTTCTCAA 58.387 33.333 11.35 0.00 34.05 3.02
6186 6784 8.830580 TGAATACTGTTTTCTGTTCTTCTCAAG 58.169 33.333 11.35 0.00 34.05 3.02
6187 6785 5.491635 ACTGTTTTCTGTTCTTCTCAAGC 57.508 39.130 0.00 0.00 0.00 4.01
6188 6786 4.034510 ACTGTTTTCTGTTCTTCTCAAGCG 59.965 41.667 0.00 0.00 0.00 4.68
6189 6787 3.312421 TGTTTTCTGTTCTTCTCAAGCGG 59.688 43.478 0.00 0.00 0.00 5.52
6190 6788 3.469008 TTTCTGTTCTTCTCAAGCGGA 57.531 42.857 0.00 0.00 0.00 5.54
6191 6789 2.440539 TCTGTTCTTCTCAAGCGGAC 57.559 50.000 0.00 0.00 0.00 4.79
6192 6790 1.686587 TCTGTTCTTCTCAAGCGGACA 59.313 47.619 0.00 0.00 0.00 4.02
6193 6791 2.064762 CTGTTCTTCTCAAGCGGACAG 58.935 52.381 0.00 0.00 32.02 3.51
6194 6792 1.412710 TGTTCTTCTCAAGCGGACAGT 59.587 47.619 0.00 0.00 0.00 3.55
6195 6793 1.795286 GTTCTTCTCAAGCGGACAGTG 59.205 52.381 0.00 0.00 0.00 3.66
6196 6794 0.318441 TCTTCTCAAGCGGACAGTGG 59.682 55.000 0.00 0.00 0.00 4.00
6197 6795 0.034059 CTTCTCAAGCGGACAGTGGT 59.966 55.000 0.00 0.00 0.00 4.16
6198 6796 0.033504 TTCTCAAGCGGACAGTGGTC 59.966 55.000 0.00 0.00 43.55 4.02
6199 6797 0.827925 TCTCAAGCGGACAGTGGTCT 60.828 55.000 0.00 0.00 43.77 3.85
6200 6798 0.034059 CTCAAGCGGACAGTGGTCTT 59.966 55.000 0.00 0.00 43.77 3.01
6201 6799 0.249868 TCAAGCGGACAGTGGTCTTG 60.250 55.000 0.00 2.69 43.77 3.02
6202 6800 0.532862 CAAGCGGACAGTGGTCTTGT 60.533 55.000 0.00 0.00 43.77 3.16
6203 6801 0.180406 AAGCGGACAGTGGTCTTGTT 59.820 50.000 0.00 0.00 43.77 2.83
6204 6802 0.249911 AGCGGACAGTGGTCTTGTTC 60.250 55.000 0.00 0.00 43.77 3.18
6205 6803 0.249911 GCGGACAGTGGTCTTGTTCT 60.250 55.000 0.00 0.00 43.77 3.01
6206 6804 1.810412 GCGGACAGTGGTCTTGTTCTT 60.810 52.381 0.00 0.00 43.77 2.52
6207 6805 2.135933 CGGACAGTGGTCTTGTTCTTC 58.864 52.381 0.00 0.00 43.77 2.87
6208 6806 2.483013 CGGACAGTGGTCTTGTTCTTCA 60.483 50.000 0.00 0.00 43.77 3.02
6209 6807 3.541632 GGACAGTGGTCTTGTTCTTCAA 58.458 45.455 0.00 0.00 43.77 2.69
6210 6808 4.137543 GGACAGTGGTCTTGTTCTTCAAT 58.862 43.478 0.00 0.00 43.77 2.57
6211 6809 4.214332 GGACAGTGGTCTTGTTCTTCAATC 59.786 45.833 0.00 0.00 43.77 2.67
6212 6810 4.780815 ACAGTGGTCTTGTTCTTCAATCA 58.219 39.130 0.00 0.00 35.35 2.57
6213 6811 5.192927 ACAGTGGTCTTGTTCTTCAATCAA 58.807 37.500 0.00 0.00 35.35 2.57
6214 6812 5.652014 ACAGTGGTCTTGTTCTTCAATCAAA 59.348 36.000 0.00 0.00 35.35 2.69
6215 6813 5.973565 CAGTGGTCTTGTTCTTCAATCAAAC 59.026 40.000 0.00 0.00 35.35 2.93
6216 6814 4.970003 GTGGTCTTGTTCTTCAATCAAACG 59.030 41.667 0.00 0.00 35.35 3.60
6217 6815 4.878971 TGGTCTTGTTCTTCAATCAAACGA 59.121 37.500 0.00 0.00 35.35 3.85
6218 6816 5.355630 TGGTCTTGTTCTTCAATCAAACGAA 59.644 36.000 0.00 0.00 35.35 3.85
6219 6817 6.127869 TGGTCTTGTTCTTCAATCAAACGAAA 60.128 34.615 0.00 0.00 35.35 3.46
6220 6818 6.750039 GGTCTTGTTCTTCAATCAAACGAAAA 59.250 34.615 0.00 0.00 35.35 2.29
6221 6819 7.274686 GGTCTTGTTCTTCAATCAAACGAAAAA 59.725 33.333 0.00 0.00 35.35 1.94
6222 6820 8.313931 GTCTTGTTCTTCAATCAAACGAAAAAG 58.686 33.333 0.00 0.00 35.35 2.27
6223 6821 6.567769 TGTTCTTCAATCAAACGAAAAAGC 57.432 33.333 0.00 0.00 0.00 3.51
6224 6822 6.329496 TGTTCTTCAATCAAACGAAAAAGCT 58.671 32.000 0.00 0.00 0.00 3.74
6225 6823 6.472163 TGTTCTTCAATCAAACGAAAAAGCTC 59.528 34.615 0.00 0.00 0.00 4.09
6226 6824 6.130298 TCTTCAATCAAACGAAAAAGCTCA 57.870 33.333 0.00 0.00 0.00 4.26
6227 6825 6.201517 TCTTCAATCAAACGAAAAAGCTCAG 58.798 36.000 0.00 0.00 0.00 3.35
6228 6826 5.499139 TCAATCAAACGAAAAAGCTCAGT 57.501 34.783 0.00 0.00 0.00 3.41
6229 6827 5.273170 TCAATCAAACGAAAAAGCTCAGTG 58.727 37.500 0.00 0.00 0.00 3.66
6230 6828 4.900635 ATCAAACGAAAAAGCTCAGTGT 57.099 36.364 0.00 0.00 0.00 3.55
6231 6829 4.014847 TCAAACGAAAAAGCTCAGTGTG 57.985 40.909 0.00 0.00 0.00 3.82
6232 6830 3.687212 TCAAACGAAAAAGCTCAGTGTGA 59.313 39.130 0.00 0.00 0.00 3.58
6233 6831 4.335315 TCAAACGAAAAAGCTCAGTGTGAT 59.665 37.500 0.00 0.00 0.00 3.06
6234 6832 4.474226 AACGAAAAAGCTCAGTGTGATC 57.526 40.909 0.00 0.00 0.00 2.92
6235 6833 2.808543 ACGAAAAAGCTCAGTGTGATCC 59.191 45.455 0.00 0.00 0.00 3.36
6236 6834 3.070018 CGAAAAAGCTCAGTGTGATCCT 58.930 45.455 0.00 0.00 0.00 3.24
6237 6835 3.499918 CGAAAAAGCTCAGTGTGATCCTT 59.500 43.478 0.00 0.00 0.00 3.36
6238 6836 4.023707 CGAAAAAGCTCAGTGTGATCCTTT 60.024 41.667 0.00 0.00 32.72 3.11
6239 6837 5.506317 CGAAAAAGCTCAGTGTGATCCTTTT 60.506 40.000 0.00 8.49 38.39 2.27
6240 6838 5.444663 AAAAGCTCAGTGTGATCCTTTTC 57.555 39.130 0.00 0.00 35.13 2.29
6241 6839 3.777106 AGCTCAGTGTGATCCTTTTCA 57.223 42.857 0.00 0.00 0.00 2.69
6242 6840 3.672808 AGCTCAGTGTGATCCTTTTCAG 58.327 45.455 0.00 0.00 0.00 3.02
6243 6841 2.161211 GCTCAGTGTGATCCTTTTCAGC 59.839 50.000 0.00 0.00 0.00 4.26
6244 6842 2.746362 CTCAGTGTGATCCTTTTCAGCC 59.254 50.000 0.00 0.00 0.00 4.85
6245 6843 2.106338 TCAGTGTGATCCTTTTCAGCCA 59.894 45.455 0.00 0.00 0.00 4.75
6246 6844 2.886523 CAGTGTGATCCTTTTCAGCCAA 59.113 45.455 0.00 0.00 0.00 4.52
6247 6845 3.318839 CAGTGTGATCCTTTTCAGCCAAA 59.681 43.478 0.00 0.00 0.00 3.28
6248 6846 3.960102 AGTGTGATCCTTTTCAGCCAAAA 59.040 39.130 0.00 0.00 32.77 2.44
6249 6847 4.051237 GTGTGATCCTTTTCAGCCAAAAC 58.949 43.478 0.00 0.00 30.42 2.43
6250 6848 3.069443 TGTGATCCTTTTCAGCCAAAACC 59.931 43.478 0.00 0.00 30.42 3.27
6251 6849 3.321968 GTGATCCTTTTCAGCCAAAACCT 59.678 43.478 0.00 0.00 30.42 3.50
6252 6850 3.321682 TGATCCTTTTCAGCCAAAACCTG 59.678 43.478 0.00 0.00 30.42 4.00
6253 6851 3.025322 TCCTTTTCAGCCAAAACCTGA 57.975 42.857 0.00 0.00 37.54 3.86
6254 6852 3.370104 TCCTTTTCAGCCAAAACCTGAA 58.630 40.909 0.09 0.09 44.92 3.02
6255 6853 3.966665 TCCTTTTCAGCCAAAACCTGAAT 59.033 39.130 4.86 0.00 45.62 2.57
6256 6854 4.060205 CCTTTTCAGCCAAAACCTGAATG 58.940 43.478 4.86 2.47 45.62 2.67
6257 6855 2.818130 TTCAGCCAAAACCTGAATGC 57.182 45.000 0.09 0.00 42.58 3.56
6258 6856 1.999648 TCAGCCAAAACCTGAATGCT 58.000 45.000 0.00 0.00 36.46 3.79
6259 6857 1.888512 TCAGCCAAAACCTGAATGCTC 59.111 47.619 0.00 0.00 36.46 4.26
6260 6858 1.891150 CAGCCAAAACCTGAATGCTCT 59.109 47.619 0.00 0.00 32.03 4.09
6261 6859 3.084039 CAGCCAAAACCTGAATGCTCTA 58.916 45.455 0.00 0.00 32.03 2.43
6262 6860 3.084786 AGCCAAAACCTGAATGCTCTAC 58.915 45.455 0.00 0.00 0.00 2.59
6263 6861 3.084786 GCCAAAACCTGAATGCTCTACT 58.915 45.455 0.00 0.00 0.00 2.57
6264 6862 4.019321 AGCCAAAACCTGAATGCTCTACTA 60.019 41.667 0.00 0.00 0.00 1.82
6265 6863 4.884164 GCCAAAACCTGAATGCTCTACTAT 59.116 41.667 0.00 0.00 0.00 2.12
6266 6864 6.055588 GCCAAAACCTGAATGCTCTACTATA 58.944 40.000 0.00 0.00 0.00 1.31
6267 6865 6.542370 GCCAAAACCTGAATGCTCTACTATAA 59.458 38.462 0.00 0.00 0.00 0.98
6268 6866 7.067008 GCCAAAACCTGAATGCTCTACTATAAA 59.933 37.037 0.00 0.00 0.00 1.40
6269 6867 8.398665 CCAAAACCTGAATGCTCTACTATAAAC 58.601 37.037 0.00 0.00 0.00 2.01
6270 6868 9.167311 CAAAACCTGAATGCTCTACTATAAACT 57.833 33.333 0.00 0.00 0.00 2.66
6272 6870 9.819267 AAACCTGAATGCTCTACTATAAACTAC 57.181 33.333 0.00 0.00 0.00 2.73
6273 6871 8.770010 ACCTGAATGCTCTACTATAAACTACT 57.230 34.615 0.00 0.00 0.00 2.57
6274 6872 8.852135 ACCTGAATGCTCTACTATAAACTACTC 58.148 37.037 0.00 0.00 0.00 2.59
6275 6873 8.301002 CCTGAATGCTCTACTATAAACTACTCC 58.699 40.741 0.00 0.00 0.00 3.85
6276 6874 8.179509 TGAATGCTCTACTATAAACTACTCCC 57.820 38.462 0.00 0.00 0.00 4.30
6277 6875 8.005388 TGAATGCTCTACTATAAACTACTCCCT 58.995 37.037 0.00 0.00 0.00 4.20
6278 6876 8.411991 AATGCTCTACTATAAACTACTCCCTC 57.588 38.462 0.00 0.00 0.00 4.30
6279 6877 6.305411 TGCTCTACTATAAACTACTCCCTCC 58.695 44.000 0.00 0.00 0.00 4.30
6280 6878 5.412286 GCTCTACTATAAACTACTCCCTCCG 59.588 48.000 0.00 0.00 0.00 4.63
6281 6879 6.506538 TCTACTATAAACTACTCCCTCCGT 57.493 41.667 0.00 0.00 0.00 4.69
6282 6880 6.904626 TCTACTATAAACTACTCCCTCCGTT 58.095 40.000 0.00 0.00 0.00 4.44
6283 6881 7.349598 TCTACTATAAACTACTCCCTCCGTTT 58.650 38.462 0.00 0.00 34.37 3.60
6284 6882 6.462552 ACTATAAACTACTCCCTCCGTTTC 57.537 41.667 0.00 0.00 32.46 2.78
6285 6883 6.193504 ACTATAAACTACTCCCTCCGTTTCT 58.806 40.000 0.00 0.00 32.46 2.52
6286 6884 7.349598 ACTATAAACTACTCCCTCCGTTTCTA 58.650 38.462 0.00 0.00 32.46 2.10
6287 6885 7.836183 ACTATAAACTACTCCCTCCGTTTCTAA 59.164 37.037 0.00 0.00 32.46 2.10
6288 6886 5.813513 AAACTACTCCCTCCGTTTCTAAA 57.186 39.130 0.00 0.00 0.00 1.85
6289 6887 6.370186 AAACTACTCCCTCCGTTTCTAAAT 57.630 37.500 0.00 0.00 0.00 1.40
6290 6888 7.486407 AAACTACTCCCTCCGTTTCTAAATA 57.514 36.000 0.00 0.00 0.00 1.40
6291 6889 7.672122 AACTACTCCCTCCGTTTCTAAATAT 57.328 36.000 0.00 0.00 0.00 1.28
6292 6890 7.672122 ACTACTCCCTCCGTTTCTAAATATT 57.328 36.000 0.00 0.00 0.00 1.28
6293 6891 8.087303 ACTACTCCCTCCGTTTCTAAATATTT 57.913 34.615 5.89 5.89 0.00 1.40
6294 6892 7.985752 ACTACTCCCTCCGTTTCTAAATATTTG 59.014 37.037 11.05 1.65 0.00 2.32
6295 6893 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
6296 6894 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
6297 6895 6.117488 TCCCTCCGTTTCTAAATATTTGTCC 58.883 40.000 11.05 0.00 0.00 4.02
6298 6896 6.069847 TCCCTCCGTTTCTAAATATTTGTCCT 60.070 38.462 11.05 0.00 0.00 3.85
6299 6897 6.602009 CCCTCCGTTTCTAAATATTTGTCCTT 59.398 38.462 11.05 0.00 0.00 3.36
6300 6898 7.122204 CCCTCCGTTTCTAAATATTTGTCCTTT 59.878 37.037 11.05 0.00 0.00 3.11
6301 6899 8.520351 CCTCCGTTTCTAAATATTTGTCCTTTT 58.480 33.333 11.05 0.00 0.00 2.27
6316 6914 8.885494 TTTGTCCTTTTACAGATTTCAAATGG 57.115 30.769 0.00 0.00 0.00 3.16
6317 6915 7.831691 TGTCCTTTTACAGATTTCAAATGGA 57.168 32.000 0.00 0.00 34.75 3.41
6318 6916 7.657336 TGTCCTTTTACAGATTTCAAATGGAC 58.343 34.615 17.67 17.67 46.45 4.02
6319 6917 7.505585 TGTCCTTTTACAGATTTCAAATGGACT 59.494 33.333 21.76 0.00 46.43 3.85
6320 6918 9.010029 GTCCTTTTACAGATTTCAAATGGACTA 57.990 33.333 17.41 0.00 44.76 2.59
6321 6919 9.010029 TCCTTTTACAGATTTCAAATGGACTAC 57.990 33.333 0.00 0.00 33.17 2.73
6322 6920 8.244113 CCTTTTACAGATTTCAAATGGACTACC 58.756 37.037 0.00 0.00 31.44 3.18
6336 6934 4.610333 TGGACTACCACATACAGATCAGT 58.390 43.478 0.00 0.00 41.77 3.41
6337 6935 4.402474 TGGACTACCACATACAGATCAGTG 59.598 45.833 0.21 0.00 41.77 3.66
6338 6936 4.363999 GACTACCACATACAGATCAGTGC 58.636 47.826 0.21 0.00 0.00 4.40
6339 6937 2.299993 ACCACATACAGATCAGTGCG 57.700 50.000 0.21 0.00 0.00 5.34
6340 6938 1.824852 ACCACATACAGATCAGTGCGA 59.175 47.619 0.21 0.00 0.00 5.10
6341 6939 2.159184 ACCACATACAGATCAGTGCGAG 60.159 50.000 0.21 0.00 0.00 5.03
6342 6940 2.159184 CCACATACAGATCAGTGCGAGT 60.159 50.000 0.21 0.00 0.00 4.18
6343 6941 3.066760 CCACATACAGATCAGTGCGAGTA 59.933 47.826 0.21 0.00 0.00 2.59
6344 6942 4.038361 CACATACAGATCAGTGCGAGTAC 58.962 47.826 0.21 0.00 0.00 2.73
6345 6943 3.948473 ACATACAGATCAGTGCGAGTACT 59.052 43.478 0.00 0.00 0.00 2.73
6346 6944 4.035792 ACATACAGATCAGTGCGAGTACTC 59.964 45.833 13.18 13.18 0.00 2.59
6347 6945 2.717390 ACAGATCAGTGCGAGTACTCT 58.283 47.619 20.34 0.00 0.00 3.24
6348 6946 2.680841 ACAGATCAGTGCGAGTACTCTC 59.319 50.000 20.34 13.47 37.35 3.20
6349 6947 2.942376 CAGATCAGTGCGAGTACTCTCT 59.058 50.000 20.34 11.36 38.45 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.094377 CGCAGGCCCTTTATGTTTTATATATGT 60.094 37.037 0.00 0.00 0.00 2.29
1 2 7.094377 ACGCAGGCCCTTTATGTTTTATATATG 60.094 37.037 0.00 0.00 0.00 1.78
68 69 1.454847 CTCTGTCCCCTCTCTCCCG 60.455 68.421 0.00 0.00 0.00 5.14
473 791 1.296068 GCAACAGCAGCTCTCCTCT 59.704 57.895 0.00 0.00 0.00 3.69
862 1181 2.645838 AGAAGCAGACAAGAAGCCAA 57.354 45.000 0.00 0.00 0.00 4.52
891 1210 4.084537 GCAAGGCACATATGATACGTACAC 60.085 45.833 10.38 0.00 0.00 2.90
938 1257 1.065273 CCATCTGCCAGAAATGCGC 59.935 57.895 0.00 0.00 0.00 6.09
939 1258 0.099968 CACCATCTGCCAGAAATGCG 59.900 55.000 0.00 0.00 0.00 4.73
976 1295 3.006728 TCCCACTTACCTGCCCCG 61.007 66.667 0.00 0.00 0.00 5.73
995 1316 2.516930 CAATCGCCCCCATTCGCT 60.517 61.111 0.00 0.00 0.00 4.93
1050 1371 2.438434 CCATTCACCACCTCCGCC 60.438 66.667 0.00 0.00 0.00 6.13
1053 1374 2.438434 CCGCCATTCACCACCTCC 60.438 66.667 0.00 0.00 0.00 4.30
1161 1482 1.012086 CATTGATGCACTCCCACTCG 58.988 55.000 0.00 0.00 0.00 4.18
1254 1575 2.923121 TGAAAAGAGCAGAACACAGCT 58.077 42.857 0.00 0.00 45.25 4.24
1255 1576 3.562505 CATGAAAAGAGCAGAACACAGC 58.437 45.455 0.00 0.00 0.00 4.40
1258 1579 3.911661 AGCATGAAAAGAGCAGAACAC 57.088 42.857 0.00 0.00 0.00 3.32
1260 1581 5.362556 TGTAAGCATGAAAAGAGCAGAAC 57.637 39.130 0.00 0.00 0.00 3.01
1261 1582 5.942236 AGATGTAAGCATGAAAAGAGCAGAA 59.058 36.000 0.00 0.00 35.07 3.02
1262 1583 5.494724 AGATGTAAGCATGAAAAGAGCAGA 58.505 37.500 0.00 0.00 35.07 4.26
1263 1584 5.814764 AGATGTAAGCATGAAAAGAGCAG 57.185 39.130 0.00 0.00 35.07 4.24
1264 1585 6.579666 AAAGATGTAAGCATGAAAAGAGCA 57.420 33.333 0.00 0.00 35.07 4.26
1265 1586 6.865205 ACAAAAGATGTAAGCATGAAAAGAGC 59.135 34.615 0.00 0.00 41.63 4.09
1266 1587 7.864379 ACACAAAAGATGTAAGCATGAAAAGAG 59.136 33.333 0.00 0.00 41.46 2.85
1267 1588 7.715657 ACACAAAAGATGTAAGCATGAAAAGA 58.284 30.769 0.00 0.00 41.46 2.52
1268 1589 7.935338 ACACAAAAGATGTAAGCATGAAAAG 57.065 32.000 0.00 0.00 41.46 2.27
1269 1590 8.715191 AAACACAAAAGATGTAAGCATGAAAA 57.285 26.923 0.00 0.00 41.46 2.29
1270 1591 8.715191 AAAACACAAAAGATGTAAGCATGAAA 57.285 26.923 0.00 0.00 41.46 2.69
1271 1592 8.715191 AAAAACACAAAAGATGTAAGCATGAA 57.285 26.923 0.00 0.00 41.46 2.57
1331 1652 5.194432 TGTTCCCAAAAAGCAGTAGTACAA 58.806 37.500 2.52 0.00 0.00 2.41
1336 1657 6.760770 TGAAAAATGTTCCCAAAAAGCAGTAG 59.239 34.615 0.00 0.00 0.00 2.57
1342 1663 8.341903 GGTGTTATGAAAAATGTTCCCAAAAAG 58.658 33.333 0.00 0.00 0.00 2.27
1350 1671 9.559958 CTACATCAGGTGTTATGAAAAATGTTC 57.440 33.333 0.00 0.00 42.29 3.18
1352 1673 8.862325 TCTACATCAGGTGTTATGAAAAATGT 57.138 30.769 0.00 0.00 42.29 2.71
1357 1678 8.362464 AGTACTCTACATCAGGTGTTATGAAA 57.638 34.615 0.00 0.00 42.29 2.69
1373 1694 7.846644 TCTAAGAGCAGTTGTAGTACTCTAC 57.153 40.000 0.00 0.00 44.72 2.59
1374 1695 7.066043 GCTTCTAAGAGCAGTTGTAGTACTCTA 59.934 40.741 0.00 0.00 42.25 2.43
1375 1696 6.127842 GCTTCTAAGAGCAGTTGTAGTACTCT 60.128 42.308 0.00 0.00 42.25 3.24
1376 1697 6.031471 GCTTCTAAGAGCAGTTGTAGTACTC 58.969 44.000 0.00 0.00 42.25 2.59
1377 1698 5.956642 GCTTCTAAGAGCAGTTGTAGTACT 58.043 41.667 0.00 0.00 42.25 2.73
1394 1715 8.565896 AATATGATGTTTGAGTGTTGCTTCTA 57.434 30.769 0.00 0.00 0.00 2.10
1490 1825 9.912634 CACATTGGAATGATTTAAACAGTAAGT 57.087 29.630 6.37 0.00 39.67 2.24
1491 1826 9.912634 ACACATTGGAATGATTTAAACAGTAAG 57.087 29.630 6.37 0.00 39.67 2.34
1493 1828 9.906660 GAACACATTGGAATGATTTAAACAGTA 57.093 29.630 6.37 0.00 39.67 2.74
1494 1829 8.420222 TGAACACATTGGAATGATTTAAACAGT 58.580 29.630 6.37 0.00 39.67 3.55
1495 1830 8.815141 TGAACACATTGGAATGATTTAAACAG 57.185 30.769 6.37 0.00 39.67 3.16
1517 1852 8.486210 ACCTGAGATACTTACATAGCAATTGAA 58.514 33.333 10.34 0.00 0.00 2.69
1518 1853 8.023021 ACCTGAGATACTTACATAGCAATTGA 57.977 34.615 10.34 0.00 0.00 2.57
1534 1869 6.620877 AATGACCACAACTTACCTGAGATA 57.379 37.500 0.00 0.00 0.00 1.98
1541 1876 5.067954 ACCAACTAATGACCACAACTTACC 58.932 41.667 0.00 0.00 0.00 2.85
1542 1877 7.733402 TTACCAACTAATGACCACAACTTAC 57.267 36.000 0.00 0.00 0.00 2.34
1544 1879 8.161425 AGTATTACCAACTAATGACCACAACTT 58.839 33.333 0.00 0.00 0.00 2.66
1548 1883 8.370266 ACTAGTATTACCAACTAATGACCACA 57.630 34.615 0.00 0.00 0.00 4.17
1567 1902 9.895138 GGAAAATGGAACCAAACTATACTAGTA 57.105 33.333 4.77 4.77 38.26 1.82
1571 1906 9.239551 GTTAGGAAAATGGAACCAAACTATACT 57.760 33.333 0.00 0.00 0.00 2.12
1572 1907 8.179615 CGTTAGGAAAATGGAACCAAACTATAC 58.820 37.037 0.00 0.00 0.00 1.47
1740 2075 4.695217 TTTCGACTCACAAGCTTTTGTT 57.305 36.364 12.16 1.29 31.86 2.83
1751 2086 8.728088 ATTATGTTTCACAATTTTCGACTCAC 57.272 30.769 0.00 0.00 0.00 3.51
1803 2138 5.508872 CAAAAACACTTGCTGAGAGAGAAG 58.491 41.667 0.00 0.00 0.00 2.85
1849 2184 6.437477 TCACTCCAGTCATAGTGTATGTCTTT 59.563 38.462 0.00 0.00 42.96 2.52
1966 2301 5.124936 ACTGGTTTGAGGACTTTGTAACAAC 59.875 40.000 0.00 0.00 0.00 3.32
1986 2321 3.318839 TCATGCTGAAAAGGAAACACTGG 59.681 43.478 0.00 0.00 0.00 4.00
2125 2465 8.637986 AGGTTAACAATGCTGAAAAAGAACATA 58.362 29.630 8.10 0.00 0.00 2.29
2150 2491 6.690098 GCAAACATGAGCATAACATACTCAAG 59.310 38.462 0.00 0.00 43.23 3.02
2190 2532 6.485171 AGGTGCCTTTCTGTAGAATAAACAT 58.515 36.000 0.00 0.00 33.54 2.71
2267 2609 2.095415 ACCTTCGCAAACGGAAATAAGC 60.095 45.455 0.00 0.00 40.63 3.09
2276 2618 3.300590 GCAATATTGAACCTTCGCAAACG 59.699 43.478 19.73 0.00 42.01 3.60
2330 2672 9.859427 CACAAATGAGAACATACAATAACCATT 57.141 29.630 0.00 0.00 35.50 3.16
2389 2731 4.586306 TTCATTTAAGAAGGTCTCCCCC 57.414 45.455 0.00 0.00 0.00 5.40
2425 2767 9.705290 GGACAAACCAATTTAAGTATTTGATGT 57.295 29.630 7.85 0.00 38.79 3.06
2494 2860 2.545526 GCACACATCTATGACGAATGGG 59.454 50.000 0.00 0.00 0.00 4.00
2501 2867 4.100529 GCAAACATGCACACATCTATGAC 58.899 43.478 0.00 0.00 32.87 3.06
2536 2902 6.650807 TCAACAGTCTGAATTGGTAGATGAAC 59.349 38.462 6.91 0.00 0.00 3.18
2601 2967 0.981183 CCACACTAGCCACAAGGGTA 59.019 55.000 0.00 0.00 45.70 3.69
2666 3032 6.371389 GGAAATATAATTGCCGCTTACACTC 58.629 40.000 0.00 0.00 0.00 3.51
2686 3052 3.703556 TCAACAAAGTTCTGCATGGGAAA 59.296 39.130 0.00 0.00 0.00 3.13
2842 3219 8.994429 TGTGAAGAATCAAAGCAAAGTAAAAA 57.006 26.923 0.00 0.00 37.30 1.94
2873 3250 6.761714 CCCATGACTACACAAGTAATTACTCC 59.238 42.308 18.28 2.54 39.07 3.85
2886 3263 5.163754 GCAACTAACAATCCCATGACTACAC 60.164 44.000 0.00 0.00 0.00 2.90
2921 3298 6.406624 CCCATGCTGAATAATGAAAGAAAGCT 60.407 38.462 0.00 0.00 0.00 3.74
2922 3299 5.751990 CCCATGCTGAATAATGAAAGAAAGC 59.248 40.000 0.00 0.00 0.00 3.51
2924 3301 5.957168 TCCCCATGCTGAATAATGAAAGAAA 59.043 36.000 0.00 0.00 0.00 2.52
2927 3304 4.891756 ACTCCCCATGCTGAATAATGAAAG 59.108 41.667 0.00 0.00 0.00 2.62
2974 3364 4.808895 TGTAATATGCGTGTAAGCTTGGAG 59.191 41.667 9.86 0.00 38.13 3.86
3085 3475 2.861462 TTGCACAACTCCCGAAAAAG 57.139 45.000 0.00 0.00 0.00 2.27
3109 3499 3.799432 ACCTGGGCATTTGTAACTACA 57.201 42.857 0.00 0.00 0.00 2.74
3124 3514 3.016736 GGACATGACCACATTAACCTGG 58.983 50.000 9.48 0.00 34.15 4.45
3145 3535 7.748683 TGCAAATGCTTAACTAGTGTTTTATCG 59.251 33.333 6.97 0.00 42.66 2.92
3172 3562 3.511934 TCTCCAGTCTAGCAACTTCCTTC 59.488 47.826 0.00 0.00 0.00 3.46
3335 3725 5.491078 TGTATTCCAAGGGAAATACAGAGGT 59.509 40.000 1.25 0.00 45.41 3.85
3530 3920 8.718734 CCAAAAGGTAATAACTAGAAGTCACAC 58.281 37.037 0.00 0.00 0.00 3.82
3561 3951 7.480810 AGAAAACAAATCAGTGTTGGAGTAAC 58.519 34.615 0.00 0.00 40.86 2.50
3587 3981 5.938125 GCTTTCCTGAGACCTAAACATACAA 59.062 40.000 0.00 0.00 0.00 2.41
3631 4025 0.189574 TTGGGGGCATTCCAACAGAA 59.810 50.000 2.71 0.00 39.15 3.02
3737 4131 4.830826 AAGACAAACGTTCATTTCCTCC 57.169 40.909 0.00 0.00 0.00 4.30
3769 4163 1.545651 GCTTGTGGGCTGGTACTTTCT 60.546 52.381 0.00 0.00 0.00 2.52
3848 4242 3.611766 AATAGGAGGTTCACCAAGACG 57.388 47.619 0.00 0.00 38.89 4.18
3925 4319 0.951558 ATGGGTTGCGTGTTGAAGAC 59.048 50.000 0.00 0.00 0.00 3.01
4117 4511 2.224378 TGCCCTTGAAAGAGTCTCACTG 60.224 50.000 1.94 0.00 0.00 3.66
4275 4669 8.970691 GCATAAAATCATGCCTAAACGATAAT 57.029 30.769 0.00 0.00 44.55 1.28
4348 4742 9.573133 AGCAAACACATTTCTTAGCATAATTAC 57.427 29.630 0.00 0.00 0.00 1.89
4393 4804 6.840527 ACCATTTCCAAATTTTCATCACCTT 58.159 32.000 0.00 0.00 0.00 3.50
4416 4827 7.147976 AGGAGTCATCAAACAATGCTTAAAAC 58.852 34.615 0.00 0.00 0.00 2.43
4418 4829 6.899393 AGGAGTCATCAAACAATGCTTAAA 57.101 33.333 0.00 0.00 0.00 1.52
4427 4838 5.752036 AGATCTCAAGGAGTCATCAAACA 57.248 39.130 0.00 0.00 0.00 2.83
4455 4873 7.469537 AGTATGTATGTATAAGGACCTGCTC 57.530 40.000 0.00 0.00 0.00 4.26
4465 4883 9.816787 TGGGACAGATGTAGTATGTATGTATAA 57.183 33.333 0.00 0.00 31.09 0.98
4468 4886 8.541899 TTTGGGACAGATGTAGTATGTATGTA 57.458 34.615 0.00 0.00 42.39 2.29
4469 4887 7.432148 TTTGGGACAGATGTAGTATGTATGT 57.568 36.000 0.00 0.00 42.39 2.29
4470 4888 8.908786 ATTTTGGGACAGATGTAGTATGTATG 57.091 34.615 0.00 0.00 42.39 2.39
4485 4903 7.032580 CGCTGATTTAATACAATTTTGGGACA 58.967 34.615 0.00 0.00 0.00 4.02
4500 4918 6.431543 TCCCAAAATAAGTGTCGCTGATTTAA 59.568 34.615 8.84 0.00 37.29 1.52
4512 5096 3.616219 TCCATCCGTCCCAAAATAAGTG 58.384 45.455 0.00 0.00 0.00 3.16
4530 5114 3.453717 AGCATTTCAGCAGATCTACTCCA 59.546 43.478 0.00 0.00 36.85 3.86
4604 5188 5.749462 CTCTTTCCATTCCCACTCTACAAT 58.251 41.667 0.00 0.00 0.00 2.71
4790 5374 3.938963 GCTCCACTTCCATGTAAATCGAA 59.061 43.478 0.00 0.00 0.00 3.71
4922 5506 9.574577 AGGGGAATATAGATAATTGGTGTATCA 57.425 33.333 0.00 0.00 31.49 2.15
4926 5510 9.951866 AAAAAGGGGAATATAGATAATTGGTGT 57.048 29.630 0.00 0.00 0.00 4.16
4956 5540 7.308348 CGTCCTTTCTCTCATCTTATCTAGGTC 60.308 44.444 0.00 0.00 0.00 3.85
5083 5674 1.630369 CATGTGGTTCCTCTCCTCCAA 59.370 52.381 0.00 0.00 0.00 3.53
5181 5772 2.279069 CCTCACGTGCTCCAGGTCT 61.279 63.158 11.67 0.00 29.69 3.85
5340 5931 5.753438 CCAATCATGAATCAATCAGCCAAAG 59.247 40.000 0.00 0.00 42.53 2.77
5365 5956 0.035439 TCAGCCAAAACGAGGGGATC 60.035 55.000 0.00 0.00 0.00 3.36
5366 5957 0.625849 ATCAGCCAAAACGAGGGGAT 59.374 50.000 0.00 0.00 0.00 3.85
5367 5958 0.404040 AATCAGCCAAAACGAGGGGA 59.596 50.000 0.00 0.00 0.00 4.81
5368 5959 0.527565 CAATCAGCCAAAACGAGGGG 59.472 55.000 0.00 0.00 0.00 4.79
5369 5960 0.527565 CCAATCAGCCAAAACGAGGG 59.472 55.000 0.00 0.00 0.00 4.30
5370 5961 1.247567 ACCAATCAGCCAAAACGAGG 58.752 50.000 0.00 0.00 0.00 4.63
5371 5962 2.293122 TCAACCAATCAGCCAAAACGAG 59.707 45.455 0.00 0.00 0.00 4.18
5372 5963 2.302260 TCAACCAATCAGCCAAAACGA 58.698 42.857 0.00 0.00 0.00 3.85
5373 5964 2.791383 TCAACCAATCAGCCAAAACG 57.209 45.000 0.00 0.00 0.00 3.60
5374 5965 4.255833 TCATCAACCAATCAGCCAAAAC 57.744 40.909 0.00 0.00 0.00 2.43
5375 5966 5.239351 CAATCATCAACCAATCAGCCAAAA 58.761 37.500 0.00 0.00 0.00 2.44
5376 5967 4.322877 CCAATCATCAACCAATCAGCCAAA 60.323 41.667 0.00 0.00 0.00 3.28
5377 5968 3.196039 CCAATCATCAACCAATCAGCCAA 59.804 43.478 0.00 0.00 0.00 4.52
5378 5969 2.761767 CCAATCATCAACCAATCAGCCA 59.238 45.455 0.00 0.00 0.00 4.75
5379 5970 2.101917 CCCAATCATCAACCAATCAGCC 59.898 50.000 0.00 0.00 0.00 4.85
5380 5971 2.762327 ACCCAATCATCAACCAATCAGC 59.238 45.455 0.00 0.00 0.00 4.26
5381 5972 3.382546 GGACCCAATCATCAACCAATCAG 59.617 47.826 0.00 0.00 0.00 2.90
5382 5973 3.245550 TGGACCCAATCATCAACCAATCA 60.246 43.478 0.00 0.00 0.00 2.57
5383 5974 3.364549 TGGACCCAATCATCAACCAATC 58.635 45.455 0.00 0.00 0.00 2.67
5384 5975 3.471430 TGGACCCAATCATCAACCAAT 57.529 42.857 0.00 0.00 0.00 3.16
5385 5976 2.988636 TGGACCCAATCATCAACCAA 57.011 45.000 0.00 0.00 0.00 3.67
5386 5977 2.311243 TCATGGACCCAATCATCAACCA 59.689 45.455 0.00 0.00 0.00 3.67
5387 5978 2.689983 GTCATGGACCCAATCATCAACC 59.310 50.000 0.00 0.00 0.00 3.77
5388 5979 2.355756 CGTCATGGACCCAATCATCAAC 59.644 50.000 0.00 0.00 0.00 3.18
5389 5980 2.238395 TCGTCATGGACCCAATCATCAA 59.762 45.455 0.00 0.00 0.00 2.57
5390 5981 1.836802 TCGTCATGGACCCAATCATCA 59.163 47.619 0.00 0.00 0.00 3.07
5391 5982 2.213499 GTCGTCATGGACCCAATCATC 58.787 52.381 0.00 0.00 0.00 2.92
5392 5983 1.559219 TGTCGTCATGGACCCAATCAT 59.441 47.619 0.00 0.00 36.07 2.45
5393 5984 0.980423 TGTCGTCATGGACCCAATCA 59.020 50.000 0.00 0.00 36.07 2.57
5394 5985 1.369625 GTGTCGTCATGGACCCAATC 58.630 55.000 0.00 0.00 36.07 2.67
5404 5995 0.317160 TTCTTGCCTCGTGTCGTCAT 59.683 50.000 0.00 0.00 0.00 3.06
5462 6053 4.697352 CCAAGATACAAAACCACCAGAGAG 59.303 45.833 0.00 0.00 0.00 3.20
5488 6083 2.293122 TGGAAAATCAGAACAGGCAACG 59.707 45.455 0.00 0.00 46.39 4.10
5520 6115 1.882625 GCATGCGCGTGTCCTGATA 60.883 57.895 29.00 0.00 0.00 2.15
5521 6116 3.197790 GCATGCGCGTGTCCTGAT 61.198 61.111 29.00 0.00 0.00 2.90
5544 6139 4.046286 AGGGCATACACCAAGATCAAAA 57.954 40.909 0.00 0.00 0.00 2.44
5558 6153 0.616371 ACCTACACGCAAAGGGCATA 59.384 50.000 2.96 0.00 45.17 3.14
5577 6172 2.357760 GCGCACCAAACCCGTCTA 60.358 61.111 0.30 0.00 0.00 2.59
5582 6177 3.834447 GAAACCGCGCACCAAACCC 62.834 63.158 8.75 0.00 0.00 4.11
5642 6237 2.945315 CGTCTGGATACGCAGTGAC 58.055 57.895 0.00 0.00 45.73 3.67
5683 6278 0.387565 ACCGTGGGAATTGCAACAAC 59.612 50.000 0.00 0.00 0.00 3.32
5684 6279 1.115467 AACCGTGGGAATTGCAACAA 58.885 45.000 0.00 0.00 0.00 2.83
5685 6280 1.115467 AAACCGTGGGAATTGCAACA 58.885 45.000 0.00 0.00 0.00 3.33
5692 6287 1.152652 TGGTGCAAACCGTGGGAAT 60.153 52.632 0.00 0.00 0.00 3.01
5714 6309 4.272504 TCGAAACAACCATTTCTGACAGAC 59.727 41.667 4.15 0.00 36.59 3.51
5734 6329 2.299013 ACAAGCTCTTGGTACACATCGA 59.701 45.455 13.48 0.00 44.45 3.59
5744 6339 5.179368 TGTTCGATTTTCTACAAGCTCTTGG 59.821 40.000 13.48 0.00 44.45 3.61
5746 6341 5.107453 CGTGTTCGATTTTCTACAAGCTCTT 60.107 40.000 0.00 0.00 39.71 2.85
5748 6343 4.150098 ACGTGTTCGATTTTCTACAAGCTC 59.850 41.667 0.00 0.00 40.62 4.09
5764 6359 1.556484 CAACGGACGACACGTGTTC 59.444 57.895 24.26 17.00 44.83 3.18
5799 6394 1.301401 CGCTTCCAACAAGGGTCGA 60.301 57.895 0.00 0.00 38.24 4.20
5800 6395 1.597027 ACGCTTCCAACAAGGGTCG 60.597 57.895 0.00 0.00 38.83 4.79
5894 6489 5.485662 AGAACAGAAAACAGTACACTTGC 57.514 39.130 0.00 0.00 0.00 4.01
5929 6524 5.163561 TGTTTGATTGAAGAACAAGACCACC 60.164 40.000 0.00 0.00 42.02 4.61
5962 6557 3.057946 GTCTTGGCTGAAAAGGATCACAC 60.058 47.826 0.00 0.00 0.00 3.82
5982 6579 9.796120 GTAGATGATAATAGTAGCATTCAGGTC 57.204 37.037 2.11 0.00 36.48 3.85
6032 6629 7.572724 GCATTGATCTATCAGTGACCTAAATGC 60.573 40.741 16.87 17.20 44.39 3.56
6034 6631 6.648310 CGCATTGATCTATCAGTGACCTAAAT 59.352 38.462 16.87 0.00 44.39 1.40
6040 6637 6.865726 AGTATTCGCATTGATCTATCAGTGAC 59.134 38.462 16.87 7.55 44.39 3.67
6046 6643 8.768955 ACTTTTGAGTATTCGCATTGATCTATC 58.231 33.333 0.00 0.00 0.00 2.08
6061 6658 2.644798 ACTGGCCTGGACTTTTGAGTAT 59.355 45.455 14.82 0.00 0.00 2.12
6069 6666 1.136329 ACATCCACTGGCCTGGACTT 61.136 55.000 15.66 3.40 43.38 3.01
6077 6674 1.137086 ACTATCACGACATCCACTGGC 59.863 52.381 0.00 0.00 0.00 4.85
6086 6683 8.630037 ACTGAATGTATATGAACTATCACGACA 58.370 33.333 0.00 0.00 38.69 4.35
6087 6684 8.906693 CACTGAATGTATATGAACTATCACGAC 58.093 37.037 0.00 0.00 38.69 4.34
6122 6720 7.004086 ACATGTGAAAGGGAGATTTGTTTAGA 58.996 34.615 0.00 0.00 0.00 2.10
6150 6748 7.985184 ACAGAAAACAGTATTCACAGTGTTCTA 59.015 33.333 0.00 0.00 43.30 2.10
6157 6755 8.147642 AGAAGAACAGAAAACAGTATTCACAG 57.852 34.615 0.00 0.00 0.00 3.66
6158 6756 7.768582 TGAGAAGAACAGAAAACAGTATTCACA 59.231 33.333 0.00 0.00 0.00 3.58
6159 6757 8.142994 TGAGAAGAACAGAAAACAGTATTCAC 57.857 34.615 0.00 0.00 0.00 3.18
6160 6758 8.731275 TTGAGAAGAACAGAAAACAGTATTCA 57.269 30.769 0.00 0.00 0.00 2.57
6161 6759 7.800847 GCTTGAGAAGAACAGAAAACAGTATTC 59.199 37.037 0.00 0.00 0.00 1.75
6162 6760 7.519008 CGCTTGAGAAGAACAGAAAACAGTATT 60.519 37.037 0.00 0.00 0.00 1.89
6163 6761 6.073548 CGCTTGAGAAGAACAGAAAACAGTAT 60.074 38.462 0.00 0.00 0.00 2.12
6164 6762 5.234329 CGCTTGAGAAGAACAGAAAACAGTA 59.766 40.000 0.00 0.00 0.00 2.74
6165 6763 4.034510 CGCTTGAGAAGAACAGAAAACAGT 59.965 41.667 0.00 0.00 0.00 3.55
6166 6764 4.521943 CGCTTGAGAAGAACAGAAAACAG 58.478 43.478 0.00 0.00 0.00 3.16
6167 6765 3.312421 CCGCTTGAGAAGAACAGAAAACA 59.688 43.478 0.00 0.00 0.00 2.83
6168 6766 3.560068 TCCGCTTGAGAAGAACAGAAAAC 59.440 43.478 0.00 0.00 0.00 2.43
6169 6767 3.560068 GTCCGCTTGAGAAGAACAGAAAA 59.440 43.478 0.00 0.00 0.00 2.29
6170 6768 3.131396 GTCCGCTTGAGAAGAACAGAAA 58.869 45.455 0.00 0.00 0.00 2.52
6171 6769 2.102420 TGTCCGCTTGAGAAGAACAGAA 59.898 45.455 0.00 0.00 0.00 3.02
6172 6770 1.686587 TGTCCGCTTGAGAAGAACAGA 59.313 47.619 0.00 0.00 0.00 3.41
6173 6771 2.064762 CTGTCCGCTTGAGAAGAACAG 58.935 52.381 0.00 0.00 0.00 3.16
6174 6772 1.412710 ACTGTCCGCTTGAGAAGAACA 59.587 47.619 0.00 0.00 0.00 3.18
6175 6773 1.795286 CACTGTCCGCTTGAGAAGAAC 59.205 52.381 0.00 0.00 0.00 3.01
6176 6774 1.270305 CCACTGTCCGCTTGAGAAGAA 60.270 52.381 0.00 0.00 0.00 2.52
6177 6775 0.318441 CCACTGTCCGCTTGAGAAGA 59.682 55.000 0.00 0.00 0.00 2.87
6178 6776 0.034059 ACCACTGTCCGCTTGAGAAG 59.966 55.000 0.00 0.00 0.00 2.85
6179 6777 0.033504 GACCACTGTCCGCTTGAGAA 59.966 55.000 0.00 0.00 35.34 2.87
6180 6778 0.827925 AGACCACTGTCCGCTTGAGA 60.828 55.000 0.00 0.00 42.81 3.27
6181 6779 0.034059 AAGACCACTGTCCGCTTGAG 59.966 55.000 0.00 0.00 42.81 3.02
6182 6780 0.249868 CAAGACCACTGTCCGCTTGA 60.250 55.000 0.00 0.00 42.81 3.02
6183 6781 0.532862 ACAAGACCACTGTCCGCTTG 60.533 55.000 0.00 0.00 42.81 4.01
6184 6782 0.180406 AACAAGACCACTGTCCGCTT 59.820 50.000 0.00 0.00 42.81 4.68
6185 6783 0.249911 GAACAAGACCACTGTCCGCT 60.250 55.000 0.00 0.00 42.81 5.52
6186 6784 0.249911 AGAACAAGACCACTGTCCGC 60.250 55.000 0.00 0.00 42.81 5.54
6187 6785 2.135933 GAAGAACAAGACCACTGTCCG 58.864 52.381 0.00 0.00 42.81 4.79
6188 6786 3.194005 TGAAGAACAAGACCACTGTCC 57.806 47.619 0.00 0.00 42.81 4.02
6189 6787 4.816385 TGATTGAAGAACAAGACCACTGTC 59.184 41.667 0.00 0.00 42.02 3.51
6190 6788 4.780815 TGATTGAAGAACAAGACCACTGT 58.219 39.130 0.00 0.00 42.02 3.55
6191 6789 5.756195 TTGATTGAAGAACAAGACCACTG 57.244 39.130 0.00 0.00 42.02 3.66
6192 6790 5.220854 CGTTTGATTGAAGAACAAGACCACT 60.221 40.000 0.00 0.00 42.02 4.00
6193 6791 4.970003 CGTTTGATTGAAGAACAAGACCAC 59.030 41.667 0.00 0.00 42.02 4.16
6194 6792 4.878971 TCGTTTGATTGAAGAACAAGACCA 59.121 37.500 0.00 0.00 42.02 4.02
6195 6793 5.418310 TCGTTTGATTGAAGAACAAGACC 57.582 39.130 0.00 0.00 42.02 3.85
6196 6794 7.734538 TTTTCGTTTGATTGAAGAACAAGAC 57.265 32.000 0.00 0.00 42.02 3.01
6197 6795 7.009174 GCTTTTTCGTTTGATTGAAGAACAAGA 59.991 33.333 6.58 0.00 42.02 3.02
6198 6796 7.009540 AGCTTTTTCGTTTGATTGAAGAACAAG 59.990 33.333 0.00 0.00 42.02 3.16
6199 6797 6.811170 AGCTTTTTCGTTTGATTGAAGAACAA 59.189 30.769 0.00 0.00 42.95 2.83
6200 6798 6.329496 AGCTTTTTCGTTTGATTGAAGAACA 58.671 32.000 0.00 0.00 0.00 3.18
6201 6799 6.472163 TGAGCTTTTTCGTTTGATTGAAGAAC 59.528 34.615 0.00 0.00 0.00 3.01
6202 6800 6.559810 TGAGCTTTTTCGTTTGATTGAAGAA 58.440 32.000 0.00 0.00 0.00 2.52
6203 6801 6.130298 TGAGCTTTTTCGTTTGATTGAAGA 57.870 33.333 0.00 0.00 0.00 2.87
6204 6802 5.973565 ACTGAGCTTTTTCGTTTGATTGAAG 59.026 36.000 0.00 0.00 0.00 3.02
6205 6803 5.743398 CACTGAGCTTTTTCGTTTGATTGAA 59.257 36.000 0.00 0.00 0.00 2.69
6206 6804 5.163663 ACACTGAGCTTTTTCGTTTGATTGA 60.164 36.000 0.00 0.00 0.00 2.57
6207 6805 5.036737 ACACTGAGCTTTTTCGTTTGATTG 58.963 37.500 0.00 0.00 0.00 2.67
6208 6806 5.036737 CACACTGAGCTTTTTCGTTTGATT 58.963 37.500 0.00 0.00 0.00 2.57
6209 6807 4.335315 TCACACTGAGCTTTTTCGTTTGAT 59.665 37.500 0.00 0.00 0.00 2.57
6210 6808 3.687212 TCACACTGAGCTTTTTCGTTTGA 59.313 39.130 0.00 0.00 0.00 2.69
6211 6809 4.014847 TCACACTGAGCTTTTTCGTTTG 57.985 40.909 0.00 0.00 0.00 2.93
6212 6810 4.261197 GGATCACACTGAGCTTTTTCGTTT 60.261 41.667 0.00 0.00 32.54 3.60
6213 6811 3.251004 GGATCACACTGAGCTTTTTCGTT 59.749 43.478 0.00 0.00 32.54 3.85
6214 6812 2.808543 GGATCACACTGAGCTTTTTCGT 59.191 45.455 0.00 0.00 32.54 3.85
6215 6813 3.070018 AGGATCACACTGAGCTTTTTCG 58.930 45.455 0.00 0.00 32.54 3.46
6216 6814 5.444663 AAAGGATCACACTGAGCTTTTTC 57.555 39.130 0.00 0.00 38.61 2.29
6217 6815 5.859205 AAAAGGATCACACTGAGCTTTTT 57.141 34.783 4.94 4.94 43.77 1.94
6218 6816 4.889409 TGAAAAGGATCACACTGAGCTTTT 59.111 37.500 0.00 0.00 42.51 2.27
6219 6817 4.464008 TGAAAAGGATCACACTGAGCTTT 58.536 39.130 0.00 0.00 33.45 3.51
6220 6818 4.070716 CTGAAAAGGATCACACTGAGCTT 58.929 43.478 0.00 0.00 32.54 3.74
6221 6819 3.672808 CTGAAAAGGATCACACTGAGCT 58.327 45.455 0.00 0.00 32.54 4.09
6222 6820 2.161211 GCTGAAAAGGATCACACTGAGC 59.839 50.000 0.00 0.00 30.81 4.26
6223 6821 2.746362 GGCTGAAAAGGATCACACTGAG 59.254 50.000 0.00 0.00 0.00 3.35
6224 6822 2.106338 TGGCTGAAAAGGATCACACTGA 59.894 45.455 0.00 0.00 0.00 3.41
6225 6823 2.507484 TGGCTGAAAAGGATCACACTG 58.493 47.619 0.00 0.00 0.00 3.66
6226 6824 2.957402 TGGCTGAAAAGGATCACACT 57.043 45.000 0.00 0.00 0.00 3.55
6227 6825 4.051237 GTTTTGGCTGAAAAGGATCACAC 58.949 43.478 0.00 0.00 34.10 3.82
6228 6826 3.069443 GGTTTTGGCTGAAAAGGATCACA 59.931 43.478 0.00 0.00 34.10 3.58
6229 6827 3.321968 AGGTTTTGGCTGAAAAGGATCAC 59.678 43.478 0.00 0.00 34.10 3.06
6230 6828 3.321682 CAGGTTTTGGCTGAAAAGGATCA 59.678 43.478 0.00 0.00 34.10 2.92
6231 6829 3.573967 TCAGGTTTTGGCTGAAAAGGATC 59.426 43.478 0.00 0.00 34.10 3.36
6232 6830 3.575805 TCAGGTTTTGGCTGAAAAGGAT 58.424 40.909 0.00 0.00 34.10 3.24
6233 6831 3.025322 TCAGGTTTTGGCTGAAAAGGA 57.975 42.857 0.00 0.00 34.10 3.36
6234 6832 3.817709 TTCAGGTTTTGGCTGAAAAGG 57.182 42.857 0.00 0.00 34.10 3.11
6235 6833 3.495753 GCATTCAGGTTTTGGCTGAAAAG 59.504 43.478 0.00 0.00 39.98 2.27
6236 6834 3.134442 AGCATTCAGGTTTTGGCTGAAAA 59.866 39.130 0.00 0.00 39.98 2.29
6237 6835 2.699846 AGCATTCAGGTTTTGGCTGAAA 59.300 40.909 0.00 0.00 39.98 2.69
6238 6836 2.297033 GAGCATTCAGGTTTTGGCTGAA 59.703 45.455 0.00 0.00 40.69 3.02
6239 6837 1.888512 GAGCATTCAGGTTTTGGCTGA 59.111 47.619 0.00 0.00 0.00 4.26
6240 6838 1.891150 AGAGCATTCAGGTTTTGGCTG 59.109 47.619 0.00 0.00 0.00 4.85
6241 6839 2.299326 AGAGCATTCAGGTTTTGGCT 57.701 45.000 0.00 0.00 0.00 4.75
6242 6840 3.084786 AGTAGAGCATTCAGGTTTTGGC 58.915 45.455 0.00 0.00 0.00 4.52
6243 6841 8.398665 GTTTATAGTAGAGCATTCAGGTTTTGG 58.601 37.037 0.00 0.00 0.00 3.28
6244 6842 9.167311 AGTTTATAGTAGAGCATTCAGGTTTTG 57.833 33.333 0.00 0.00 0.00 2.44
6246 6844 9.819267 GTAGTTTATAGTAGAGCATTCAGGTTT 57.181 33.333 0.00 0.00 0.00 3.27
6247 6845 9.203163 AGTAGTTTATAGTAGAGCATTCAGGTT 57.797 33.333 0.00 0.00 0.00 3.50
6248 6846 8.770010 AGTAGTTTATAGTAGAGCATTCAGGT 57.230 34.615 0.00 0.00 0.00 4.00
6249 6847 8.301002 GGAGTAGTTTATAGTAGAGCATTCAGG 58.699 40.741 0.00 0.00 0.00 3.86
6250 6848 8.301002 GGGAGTAGTTTATAGTAGAGCATTCAG 58.699 40.741 0.00 0.00 0.00 3.02
6251 6849 8.005388 AGGGAGTAGTTTATAGTAGAGCATTCA 58.995 37.037 0.00 0.00 0.00 2.57
6252 6850 8.411991 AGGGAGTAGTTTATAGTAGAGCATTC 57.588 38.462 0.00 0.00 0.00 2.67
6253 6851 7.452189 GGAGGGAGTAGTTTATAGTAGAGCATT 59.548 40.741 0.00 0.00 0.00 3.56
6254 6852 6.949463 GGAGGGAGTAGTTTATAGTAGAGCAT 59.051 42.308 0.00 0.00 0.00 3.79
6255 6853 6.305411 GGAGGGAGTAGTTTATAGTAGAGCA 58.695 44.000 0.00 0.00 0.00 4.26
6256 6854 5.412286 CGGAGGGAGTAGTTTATAGTAGAGC 59.588 48.000 0.00 0.00 0.00 4.09
6257 6855 6.532826 ACGGAGGGAGTAGTTTATAGTAGAG 58.467 44.000 0.00 0.00 0.00 2.43
6258 6856 6.506538 ACGGAGGGAGTAGTTTATAGTAGA 57.493 41.667 0.00 0.00 0.00 2.59
6259 6857 7.501892 AGAAACGGAGGGAGTAGTTTATAGTAG 59.498 40.741 0.00 0.00 37.00 2.57
6260 6858 7.349598 AGAAACGGAGGGAGTAGTTTATAGTA 58.650 38.462 0.00 0.00 37.00 1.82
6261 6859 6.193504 AGAAACGGAGGGAGTAGTTTATAGT 58.806 40.000 0.00 0.00 37.00 2.12
6262 6860 6.712179 AGAAACGGAGGGAGTAGTTTATAG 57.288 41.667 0.00 0.00 37.00 1.31
6263 6861 8.593945 TTTAGAAACGGAGGGAGTAGTTTATA 57.406 34.615 0.00 0.00 37.00 0.98
6264 6862 7.486407 TTTAGAAACGGAGGGAGTAGTTTAT 57.514 36.000 0.00 0.00 37.00 1.40
6265 6863 6.916360 TTTAGAAACGGAGGGAGTAGTTTA 57.084 37.500 0.00 0.00 37.00 2.01
6266 6864 5.813513 TTTAGAAACGGAGGGAGTAGTTT 57.186 39.130 0.00 0.00 39.21 2.66
6267 6865 7.672122 ATATTTAGAAACGGAGGGAGTAGTT 57.328 36.000 0.00 0.00 0.00 2.24
6268 6866 7.672122 AATATTTAGAAACGGAGGGAGTAGT 57.328 36.000 0.00 0.00 0.00 2.73
6269 6867 7.985752 ACAAATATTTAGAAACGGAGGGAGTAG 59.014 37.037 0.00 0.00 0.00 2.57
6270 6868 7.854337 ACAAATATTTAGAAACGGAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
6271 6869 6.718294 ACAAATATTTAGAAACGGAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
6272 6870 6.260271 GGACAAATATTTAGAAACGGAGGGAG 59.740 42.308 0.00 0.00 0.00 4.30
6273 6871 6.069847 AGGACAAATATTTAGAAACGGAGGGA 60.070 38.462 0.00 0.00 0.00 4.20
6274 6872 6.120220 AGGACAAATATTTAGAAACGGAGGG 58.880 40.000 0.00 0.00 0.00 4.30
6275 6873 7.625828 AAGGACAAATATTTAGAAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
6290 6888 9.492973 CCATTTGAAATCTGTAAAAGGACAAAT 57.507 29.630 0.00 0.00 36.38 2.32
6291 6889 8.700051 TCCATTTGAAATCTGTAAAAGGACAAA 58.300 29.630 0.00 0.00 29.31 2.83
6292 6890 8.141268 GTCCATTTGAAATCTGTAAAAGGACAA 58.859 33.333 14.70 0.00 44.90 3.18
6293 6891 7.505585 AGTCCATTTGAAATCTGTAAAAGGACA 59.494 33.333 19.19 0.00 46.52 4.02
6294 6892 7.886338 AGTCCATTTGAAATCTGTAAAAGGAC 58.114 34.615 12.72 12.72 45.43 3.85
6295 6893 9.010029 GTAGTCCATTTGAAATCTGTAAAAGGA 57.990 33.333 0.00 0.00 31.14 3.36
6296 6894 8.244113 GGTAGTCCATTTGAAATCTGTAAAAGG 58.756 37.037 0.00 0.00 0.00 3.11
6297 6895 8.792633 TGGTAGTCCATTTGAAATCTGTAAAAG 58.207 33.333 0.00 0.00 39.03 2.27
6298 6896 8.573035 GTGGTAGTCCATTTGAAATCTGTAAAA 58.427 33.333 0.00 0.00 46.20 1.52
6299 6897 7.721842 TGTGGTAGTCCATTTGAAATCTGTAAA 59.278 33.333 0.00 0.00 46.20 2.01
6300 6898 7.227873 TGTGGTAGTCCATTTGAAATCTGTAA 58.772 34.615 0.00 0.00 46.20 2.41
6301 6899 6.774673 TGTGGTAGTCCATTTGAAATCTGTA 58.225 36.000 0.00 0.00 46.20 2.74
6302 6900 5.630121 TGTGGTAGTCCATTTGAAATCTGT 58.370 37.500 0.00 0.00 46.20 3.41
6303 6901 6.764308 ATGTGGTAGTCCATTTGAAATCTG 57.236 37.500 0.00 0.00 46.20 2.90
6304 6902 7.402054 TGTATGTGGTAGTCCATTTGAAATCT 58.598 34.615 0.00 0.00 46.20 2.40
6305 6903 7.552687 TCTGTATGTGGTAGTCCATTTGAAATC 59.447 37.037 0.00 0.00 46.20 2.17
6306 6904 7.402054 TCTGTATGTGGTAGTCCATTTGAAAT 58.598 34.615 0.00 0.00 46.20 2.17
6307 6905 6.774673 TCTGTATGTGGTAGTCCATTTGAAA 58.225 36.000 0.00 0.00 46.20 2.69
6308 6906 6.367374 TCTGTATGTGGTAGTCCATTTGAA 57.633 37.500 0.00 0.00 46.20 2.69
6309 6907 6.156083 TGATCTGTATGTGGTAGTCCATTTGA 59.844 38.462 0.00 0.00 46.20 2.69
6310 6908 6.348498 TGATCTGTATGTGGTAGTCCATTTG 58.652 40.000 0.00 0.00 46.20 2.32
6311 6909 6.156949 ACTGATCTGTATGTGGTAGTCCATTT 59.843 38.462 3.02 0.00 46.20 2.32
6312 6910 5.663106 ACTGATCTGTATGTGGTAGTCCATT 59.337 40.000 3.02 0.00 46.20 3.16
6313 6911 5.069648 CACTGATCTGTATGTGGTAGTCCAT 59.930 44.000 4.78 0.00 46.20 3.41
6314 6912 4.402474 CACTGATCTGTATGTGGTAGTCCA 59.598 45.833 4.78 0.00 42.05 4.02
6315 6913 4.737946 GCACTGATCTGTATGTGGTAGTCC 60.738 50.000 4.78 0.00 0.00 3.85
6316 6914 4.363999 GCACTGATCTGTATGTGGTAGTC 58.636 47.826 4.78 0.00 0.00 2.59
6317 6915 3.181486 CGCACTGATCTGTATGTGGTAGT 60.181 47.826 4.78 0.00 0.00 2.73
6318 6916 3.066760 TCGCACTGATCTGTATGTGGTAG 59.933 47.826 4.78 0.00 0.00 3.18
6319 6917 3.020984 TCGCACTGATCTGTATGTGGTA 58.979 45.455 4.78 0.00 0.00 3.25
6320 6918 1.824852 TCGCACTGATCTGTATGTGGT 59.175 47.619 4.78 0.00 0.00 4.16
6321 6919 2.159184 ACTCGCACTGATCTGTATGTGG 60.159 50.000 4.78 0.00 0.00 4.17
6322 6920 3.156511 ACTCGCACTGATCTGTATGTG 57.843 47.619 4.78 1.62 0.00 3.21
6323 6921 3.948473 AGTACTCGCACTGATCTGTATGT 59.052 43.478 4.78 5.02 0.00 2.29
6324 6922 4.274705 AGAGTACTCGCACTGATCTGTATG 59.725 45.833 17.07 1.43 34.09 2.39
6325 6923 4.456535 AGAGTACTCGCACTGATCTGTAT 58.543 43.478 17.07 0.00 34.09 2.29
6326 6924 3.872182 GAGAGTACTCGCACTGATCTGTA 59.128 47.826 20.26 0.00 33.32 2.74
6327 6925 2.680841 GAGAGTACTCGCACTGATCTGT 59.319 50.000 20.26 0.00 33.32 3.41
6328 6926 2.942376 AGAGAGTACTCGCACTGATCTG 59.058 50.000 25.69 0.00 46.64 2.90
6329 6927 3.275617 AGAGAGTACTCGCACTGATCT 57.724 47.619 25.69 14.47 46.64 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.