Multiple sequence alignment - TraesCS6B01G278300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G278300 chr6B 100.000 4376 0 0 1 4376 503561897 503557522 0.000000e+00 8082
1 TraesCS6B01G278300 chr6D 86.946 4152 276 124 1 4026 319677932 319681943 0.000000e+00 4420
2 TraesCS6B01G278300 chr6D 84.682 346 39 10 4039 4376 319682252 319682591 2.520000e-87 333
3 TraesCS6B01G278300 chr6A 88.214 3394 189 79 253 3522 457370532 457373838 0.000000e+00 3856
4 TraesCS6B01G278300 chr3B 90.370 135 8 3 4148 4281 101911548 101911418 5.820000e-39 172
5 TraesCS6B01G278300 chr1B 90.370 135 8 3 4148 4281 543405996 543405866 5.820000e-39 172
6 TraesCS6B01G278300 chr5B 89.630 135 9 3 4148 4281 128815179 128815309 2.710000e-37 167
7 TraesCS6B01G278300 chr4D 89.630 135 9 3 4148 4281 19877090 19877220 2.710000e-37 167
8 TraesCS6B01G278300 chr1A 89.630 135 9 3 4148 4281 154075238 154075368 2.710000e-37 167
9 TraesCS6B01G278300 chr3D 88.889 135 10 3 4148 4281 568585754 568585884 1.260000e-35 161
10 TraesCS6B01G278300 chr2B 88.889 135 9 4 4148 4281 152829829 152829700 1.260000e-35 161
11 TraesCS6B01G278300 chr5D 87.407 135 12 3 4148 4281 6267347 6267217 2.730000e-32 150
12 TraesCS6B01G278300 chr5D 91.250 80 7 0 4047 4126 5820247 5820168 4.630000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G278300 chr6B 503557522 503561897 4375 True 8082.0 8082 100.000 1 4376 1 chr6B.!!$R1 4375
1 TraesCS6B01G278300 chr6D 319677932 319682591 4659 False 2376.5 4420 85.814 1 4376 2 chr6D.!!$F1 4375
2 TraesCS6B01G278300 chr6A 457370532 457373838 3306 False 3856.0 3856 88.214 253 3522 1 chr6A.!!$F1 3269

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
793 874 0.038892 CCCGGAAAACGTCTTCTCGA 60.039 55.0 0.73 0.0 42.24 4.04 F
1803 1920 0.035317 AGAAACATGCTGCTCCGTCA 59.965 50.0 0.00 0.0 0.00 4.35 F
1818 1935 0.848942 CGTCATCGGCTTCGAAGATG 59.151 55.0 28.95 21.5 46.60 2.90 F
2987 3151 0.896479 TGTTCACCGACCTCGATCCA 60.896 55.0 0.00 0.0 43.02 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2334 2467 0.399075 ATCGGTTTCCTCCCGTTTGT 59.601 50.0 0.0 0.0 45.63 2.83 R
3024 3188 0.311790 AGCACCACACAAATTGCTCG 59.688 50.0 0.0 0.0 41.53 5.03 R
3232 3421 0.975887 GGCAAGGGGAAAATCAGCAA 59.024 50.0 0.0 0.0 0.00 3.91 R
4246 4764 0.945813 CGAAAGTACGGGTTTGCCAA 59.054 50.0 0.0 0.0 36.17 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.138125 TCGGTCATTTACGAAACCTAACT 57.862 39.130 0.00 0.00 36.01 2.24
29 30 4.434713 TTACGAAACCTAACTACCGACC 57.565 45.455 0.00 0.00 0.00 4.79
30 31 1.200020 ACGAAACCTAACTACCGACCG 59.800 52.381 0.00 0.00 0.00 4.79
32 33 0.968405 AAACCTAACTACCGACCGCA 59.032 50.000 0.00 0.00 0.00 5.69
33 34 1.188863 AACCTAACTACCGACCGCAT 58.811 50.000 0.00 0.00 0.00 4.73
35 36 1.952296 ACCTAACTACCGACCGCATAG 59.048 52.381 0.00 0.00 0.00 2.23
36 37 1.952296 CCTAACTACCGACCGCATAGT 59.048 52.381 0.00 0.00 0.00 2.12
37 38 2.360165 CCTAACTACCGACCGCATAGTT 59.640 50.000 16.13 16.13 41.07 2.24
38 39 3.181483 CCTAACTACCGACCGCATAGTTT 60.181 47.826 16.70 7.03 39.34 2.66
62 64 4.168760 CCACGATTTTTCAGCAGAAATCC 58.831 43.478 5.01 0.00 42.90 3.01
71 73 5.649782 TTCAGCAGAAATCCCATCTTTTC 57.350 39.130 0.00 0.00 33.08 2.29
72 74 4.019174 TCAGCAGAAATCCCATCTTTTCC 58.981 43.478 0.00 0.00 33.30 3.13
73 75 3.131755 CAGCAGAAATCCCATCTTTTCCC 59.868 47.826 0.00 0.00 33.30 3.97
119 121 0.244450 AATCACGCCCAGCAATGTTG 59.756 50.000 0.00 0.00 0.00 3.33
124 126 1.885871 GCCCAGCAATGTTGAGTCC 59.114 57.895 0.00 0.00 0.00 3.85
137 139 3.338126 GAGTCCGCGATCACCACGT 62.338 63.158 8.23 0.00 0.00 4.49
140 142 2.179767 CCGCGATCACCACGTACA 59.820 61.111 8.23 0.00 0.00 2.90
141 143 1.872234 CCGCGATCACCACGTACAG 60.872 63.158 8.23 0.00 0.00 2.74
142 144 1.872234 CGCGATCACCACGTACAGG 60.872 63.158 0.00 0.00 0.00 4.00
143 145 1.518572 GCGATCACCACGTACAGGG 60.519 63.158 6.33 2.56 0.00 4.45
161 177 2.187946 CTGACCACGATCCTGCCC 59.812 66.667 0.00 0.00 0.00 5.36
162 178 3.391665 CTGACCACGATCCTGCCCC 62.392 68.421 0.00 0.00 0.00 5.80
163 179 3.083997 GACCACGATCCTGCCCCT 61.084 66.667 0.00 0.00 0.00 4.79
164 180 2.610859 ACCACGATCCTGCCCCTT 60.611 61.111 0.00 0.00 0.00 3.95
165 181 2.124570 CCACGATCCTGCCCCTTG 60.125 66.667 0.00 0.00 0.00 3.61
166 182 2.671070 CACGATCCTGCCCCTTGT 59.329 61.111 0.00 0.00 0.00 3.16
167 183 1.450312 CACGATCCTGCCCCTTGTC 60.450 63.158 0.00 0.00 0.00 3.18
168 184 2.190578 CGATCCTGCCCCTTGTCC 59.809 66.667 0.00 0.00 0.00 4.02
169 185 2.370445 CGATCCTGCCCCTTGTCCT 61.370 63.158 0.00 0.00 0.00 3.85
170 186 1.225704 GATCCTGCCCCTTGTCCTG 59.774 63.158 0.00 0.00 0.00 3.86
171 187 1.229951 ATCCTGCCCCTTGTCCTGA 60.230 57.895 0.00 0.00 0.00 3.86
172 188 1.566298 ATCCTGCCCCTTGTCCTGAC 61.566 60.000 0.00 0.00 0.00 3.51
173 189 2.227036 CCTGCCCCTTGTCCTGACT 61.227 63.158 0.00 0.00 0.00 3.41
174 190 1.298014 CTGCCCCTTGTCCTGACTC 59.702 63.158 0.00 0.00 0.00 3.36
175 191 2.190488 CTGCCCCTTGTCCTGACTCC 62.190 65.000 0.00 0.00 0.00 3.85
176 192 1.920835 GCCCCTTGTCCTGACTCCT 60.921 63.158 0.00 0.00 0.00 3.69
177 193 1.986413 CCCCTTGTCCTGACTCCTG 59.014 63.158 0.00 0.00 0.00 3.86
178 194 0.838122 CCCCTTGTCCTGACTCCTGT 60.838 60.000 0.00 0.00 0.00 4.00
179 195 1.059913 CCCTTGTCCTGACTCCTGTT 58.940 55.000 0.00 0.00 0.00 3.16
180 196 1.002544 CCCTTGTCCTGACTCCTGTTC 59.997 57.143 0.00 0.00 0.00 3.18
181 197 1.974236 CCTTGTCCTGACTCCTGTTCT 59.026 52.381 0.00 0.00 0.00 3.01
182 198 2.028567 CCTTGTCCTGACTCCTGTTCTC 60.029 54.545 0.00 0.00 0.00 2.87
183 199 1.633774 TGTCCTGACTCCTGTTCTCC 58.366 55.000 0.00 0.00 0.00 3.71
184 200 0.528470 GTCCTGACTCCTGTTCTCCG 59.472 60.000 0.00 0.00 0.00 4.63
185 201 0.612174 TCCTGACTCCTGTTCTCCGG 60.612 60.000 0.00 0.00 0.00 5.14
186 202 1.608717 CCTGACTCCTGTTCTCCGGG 61.609 65.000 0.00 0.00 41.48 5.73
187 203 0.900647 CTGACTCCTGTTCTCCGGGT 60.901 60.000 0.00 0.00 40.86 5.28
188 204 1.185618 TGACTCCTGTTCTCCGGGTG 61.186 60.000 0.00 0.00 40.86 4.61
189 205 2.266055 CTCCTGTTCTCCGGGTGC 59.734 66.667 0.00 0.00 40.86 5.01
190 206 3.649277 CTCCTGTTCTCCGGGTGCG 62.649 68.421 0.00 0.00 40.86 5.34
191 207 4.003788 CCTGTTCTCCGGGTGCGT 62.004 66.667 0.00 0.00 34.56 5.24
192 208 2.642254 CCTGTTCTCCGGGTGCGTA 61.642 63.158 0.00 0.00 34.56 4.42
193 209 1.445582 CTGTTCTCCGGGTGCGTAC 60.446 63.158 0.00 0.00 0.00 3.67
194 210 2.149803 CTGTTCTCCGGGTGCGTACA 62.150 60.000 5.86 0.00 0.00 2.90
195 211 1.217244 GTTCTCCGGGTGCGTACAT 59.783 57.895 5.86 0.00 0.00 2.29
196 212 1.082117 GTTCTCCGGGTGCGTACATG 61.082 60.000 5.86 0.00 0.00 3.21
197 213 2.845752 TTCTCCGGGTGCGTACATGC 62.846 60.000 5.86 0.00 0.00 4.06
198 214 4.805231 TCCGGGTGCGTACATGCG 62.805 66.667 5.86 0.00 37.81 4.73
273 311 0.992802 GGAAGCTACAAAGACGCTCG 59.007 55.000 0.00 0.00 32.70 5.03
287 325 3.096791 CTCGGGTCGACCTACGTC 58.903 66.667 32.52 15.54 43.13 4.34
305 343 1.660575 CACGGACGCGGGATATGAC 60.661 63.158 12.47 0.00 0.00 3.06
370 410 1.850755 TTCCCTTCTCCCACCACCC 60.851 63.158 0.00 0.00 0.00 4.61
376 421 4.016706 CTCCCACCACCCACGACC 62.017 72.222 0.00 0.00 0.00 4.79
513 564 3.453679 GCTTCTCCTCGTCCCGCT 61.454 66.667 0.00 0.00 0.00 5.52
514 565 2.802106 CTTCTCCTCGTCCCGCTC 59.198 66.667 0.00 0.00 0.00 5.03
515 566 2.754658 TTCTCCTCGTCCCGCTCC 60.755 66.667 0.00 0.00 0.00 4.70
516 567 4.816984 TCTCCTCGTCCCGCTCCC 62.817 72.222 0.00 0.00 0.00 4.30
577 628 0.243095 CCCGCTATAAGTACCGAGGC 59.757 60.000 0.00 0.00 0.00 4.70
626 682 1.241990 CCCTCAACCAGACGAGACGA 61.242 60.000 0.00 0.00 0.00 4.20
627 683 0.169230 CCTCAACCAGACGAGACGAG 59.831 60.000 0.00 0.00 0.00 4.18
628 684 1.157585 CTCAACCAGACGAGACGAGA 58.842 55.000 0.00 0.00 0.00 4.04
630 686 0.452950 CAACCAGACGAGACGAGACG 60.453 60.000 0.00 0.00 0.00 4.18
639 703 2.020287 GACGAGACGAGACGCGAG 59.980 66.667 15.93 3.32 44.57 5.03
658 722 1.373059 GCCCCTCCTCGATTGATCC 59.627 63.158 0.00 0.00 0.00 3.36
659 723 1.668294 CCCCTCCTCGATTGATCCG 59.332 63.158 0.00 0.00 0.00 4.18
660 724 1.005630 CCCTCCTCGATTGATCCGC 60.006 63.158 0.00 0.00 0.00 5.54
661 725 1.372251 CCTCCTCGATTGATCCGCG 60.372 63.158 0.00 0.00 0.00 6.46
662 726 1.360551 CTCCTCGATTGATCCGCGT 59.639 57.895 4.92 0.00 0.00 6.01
663 727 0.661780 CTCCTCGATTGATCCGCGTC 60.662 60.000 4.92 0.00 0.00 5.19
664 728 2.011349 CCTCGATTGATCCGCGTCG 61.011 63.158 4.92 6.80 35.55 5.12
665 729 1.010013 CTCGATTGATCCGCGTCGA 60.010 57.895 15.06 15.06 40.38 4.20
666 730 1.262824 CTCGATTGATCCGCGTCGAC 61.263 60.000 12.41 5.18 38.09 4.20
667 731 2.293627 CGATTGATCCGCGTCGACC 61.294 63.158 10.58 1.77 36.25 4.79
668 732 1.949631 GATTGATCCGCGTCGACCC 60.950 63.158 10.58 0.00 0.00 4.46
669 733 3.441011 ATTGATCCGCGTCGACCCC 62.441 63.158 10.58 0.00 0.00 4.95
678 742 4.267503 GTCGACCCCCGCTCGATC 62.268 72.222 3.51 0.00 41.93 3.69
681 745 4.267503 GACCCCCGCTCGATCGTC 62.268 72.222 15.94 7.49 0.00 4.20
683 747 3.606662 CCCCCGCTCGATCGTCAT 61.607 66.667 15.94 0.00 0.00 3.06
684 748 2.265904 CCCCCGCTCGATCGTCATA 61.266 63.158 15.94 0.00 0.00 2.15
685 749 1.081376 CCCCGCTCGATCGTCATAC 60.081 63.158 15.94 0.55 0.00 2.39
686 750 1.440518 CCCGCTCGATCGTCATACG 60.441 63.158 15.94 12.09 44.19 3.06
687 751 1.278937 CCGCTCGATCGTCATACGT 59.721 57.895 15.94 0.00 43.14 3.57
740 808 1.810030 CGCGTCAAGCTAGGGTTCC 60.810 63.158 0.00 0.00 45.59 3.62
755 823 0.664224 GTTCCTGGTTTTTCGCCGAA 59.336 50.000 0.00 0.00 0.00 4.30
756 824 1.268625 GTTCCTGGTTTTTCGCCGAAT 59.731 47.619 0.00 0.00 0.00 3.34
757 825 1.611519 TCCTGGTTTTTCGCCGAATT 58.388 45.000 0.00 0.00 0.00 2.17
758 826 1.957877 TCCTGGTTTTTCGCCGAATTT 59.042 42.857 0.00 0.00 0.00 1.82
759 827 2.030628 TCCTGGTTTTTCGCCGAATTTC 60.031 45.455 0.00 0.00 0.00 2.17
771 852 0.230769 CGAATTTCTCGCTGGATCGC 59.769 55.000 0.00 0.00 41.49 4.58
772 853 1.290203 GAATTTCTCGCTGGATCGCA 58.710 50.000 0.00 0.00 0.00 5.10
773 854 1.260033 GAATTTCTCGCTGGATCGCAG 59.740 52.381 6.79 6.79 0.00 5.18
793 874 0.038892 CCCGGAAAACGTCTTCTCGA 60.039 55.000 0.73 0.00 42.24 4.04
794 875 1.403780 CCCGGAAAACGTCTTCTCGAT 60.404 52.381 0.73 0.00 42.24 3.59
795 876 1.918609 CCGGAAAACGTCTTCTCGATC 59.081 52.381 12.21 0.00 42.24 3.69
796 877 1.578023 CGGAAAACGTCTTCTCGATCG 59.422 52.381 9.36 9.36 37.93 3.69
806 887 4.201504 CGTCTTCTCGATCGTTTCCTTTTC 60.202 45.833 15.94 0.00 0.00 2.29
811 892 1.717645 CGATCGTTTCCTTTTCGACGT 59.282 47.619 7.03 0.00 36.46 4.34
812 893 2.910482 CGATCGTTTCCTTTTCGACGTA 59.090 45.455 7.03 0.00 36.46 3.57
822 903 5.544650 TCCTTTTCGACGTAAATCTTTCCT 58.455 37.500 0.00 0.00 0.00 3.36
828 909 3.060363 CGACGTAAATCTTTCCTTCGGTG 59.940 47.826 0.00 0.00 0.00 4.94
832 913 3.643159 AAATCTTTCCTTCGGTGCAAC 57.357 42.857 0.00 0.00 0.00 4.17
833 914 2.270352 ATCTTTCCTTCGGTGCAACA 57.730 45.000 0.98 0.00 39.98 3.33
834 915 2.045561 TCTTTCCTTCGGTGCAACAA 57.954 45.000 0.98 0.00 39.98 2.83
835 916 2.370349 TCTTTCCTTCGGTGCAACAAA 58.630 42.857 0.98 0.00 39.98 2.83
836 917 2.955660 TCTTTCCTTCGGTGCAACAAAT 59.044 40.909 0.98 0.00 39.98 2.32
837 918 3.004315 TCTTTCCTTCGGTGCAACAAATC 59.996 43.478 0.98 0.00 39.98 2.17
838 919 2.270352 TCCTTCGGTGCAACAAATCT 57.730 45.000 0.98 0.00 39.98 2.40
843 924 4.261405 CCTTCGGTGCAACAAATCTGTTTA 60.261 41.667 0.98 0.00 43.45 2.01
877 958 0.729116 CGATTTGCAGGCGATCTTGT 59.271 50.000 0.00 0.00 0.00 3.16
878 959 1.131126 CGATTTGCAGGCGATCTTGTT 59.869 47.619 0.00 0.00 0.00 2.83
881 962 3.451141 TTTGCAGGCGATCTTGTTTTT 57.549 38.095 0.00 0.00 0.00 1.94
901 982 5.437289 TTTTTCTTGCTGAACACGATCAT 57.563 34.783 0.00 0.00 33.88 2.45
903 984 3.317603 TCTTGCTGAACACGATCATGA 57.682 42.857 0.00 0.00 0.00 3.07
904 985 3.865446 TCTTGCTGAACACGATCATGAT 58.135 40.909 8.25 8.25 0.00 2.45
909 990 6.493449 TGCTGAACACGATCATGATTTTTA 57.507 33.333 10.14 0.00 0.00 1.52
911 992 8.207521 TGCTGAACACGATCATGATTTTTATA 57.792 30.769 10.14 0.00 0.00 0.98
937 1040 8.956533 TTATAGGTTTATTAAACACCGTACCC 57.043 34.615 18.41 1.87 43.15 3.69
941 1046 7.049754 AGGTTTATTAAACACCGTACCCTATG 58.950 38.462 18.41 0.00 43.15 2.23
954 1059 0.861837 CCCTATGCGATCGTTCTTGC 59.138 55.000 17.81 0.00 0.00 4.01
963 1068 2.351418 CGATCGTTCTTGCAGGCATTAA 59.649 45.455 7.03 0.00 0.00 1.40
964 1069 3.002656 CGATCGTTCTTGCAGGCATTAAT 59.997 43.478 7.03 0.00 0.00 1.40
965 1070 4.531332 GATCGTTCTTGCAGGCATTAATC 58.469 43.478 0.00 0.00 0.00 1.75
966 1071 3.342719 TCGTTCTTGCAGGCATTAATCA 58.657 40.909 0.00 0.00 0.00 2.57
970 1075 2.938451 TCTTGCAGGCATTAATCACTCG 59.062 45.455 0.00 0.00 0.00 4.18
991 1096 4.157105 TCGGAGTTTCATACGACAAGATCA 59.843 41.667 0.00 0.00 0.00 2.92
1003 1111 0.179100 CAAGATCACCGCGGAGATGT 60.179 55.000 37.39 31.56 0.00 3.06
1011 1119 2.920645 CGCGGAGATGTCGGGCTAT 61.921 63.158 0.00 0.00 34.12 2.97
1034 1142 4.512198 TGACGACAATGAAACCAACGTAAT 59.488 37.500 0.00 0.00 32.88 1.89
1035 1143 5.007823 TGACGACAATGAAACCAACGTAATT 59.992 36.000 0.00 0.00 32.88 1.40
1044 1152 6.367421 TGAAACCAACGTAATTTCAATCTCG 58.633 36.000 15.50 0.00 38.92 4.04
1053 1161 6.035112 ACGTAATTTCAATCTCGCTCTTTCTC 59.965 38.462 0.00 0.00 0.00 2.87
1055 1163 7.432545 CGTAATTTCAATCTCGCTCTTTCTCTA 59.567 37.037 0.00 0.00 0.00 2.43
1056 1164 9.255304 GTAATTTCAATCTCGCTCTTTCTCTAT 57.745 33.333 0.00 0.00 0.00 1.98
1057 1165 8.729805 AATTTCAATCTCGCTCTTTCTCTATT 57.270 30.769 0.00 0.00 0.00 1.73
1058 1166 7.531280 TTTCAATCTCGCTCTTTCTCTATTG 57.469 36.000 0.00 0.00 0.00 1.90
1059 1167 5.595885 TCAATCTCGCTCTTTCTCTATTGG 58.404 41.667 0.00 0.00 0.00 3.16
1060 1168 5.360999 TCAATCTCGCTCTTTCTCTATTGGA 59.639 40.000 0.00 0.00 0.00 3.53
1062 1170 5.661056 TCTCGCTCTTTCTCTATTGGAAA 57.339 39.130 0.00 0.00 0.00 3.13
1063 1171 6.227298 TCTCGCTCTTTCTCTATTGGAAAT 57.773 37.500 0.00 0.00 33.12 2.17
1065 1173 7.106239 TCTCGCTCTTTCTCTATTGGAAATTT 58.894 34.615 0.00 0.00 33.12 1.82
1066 1174 7.065085 TCTCGCTCTTTCTCTATTGGAAATTTG 59.935 37.037 0.00 0.00 33.12 2.32
1067 1175 6.094048 TCGCTCTTTCTCTATTGGAAATTTGG 59.906 38.462 0.00 0.00 33.12 3.28
1068 1176 6.094048 CGCTCTTTCTCTATTGGAAATTTGGA 59.906 38.462 0.00 0.00 33.12 3.53
1070 1178 8.473219 GCTCTTTCTCTATTGGAAATTTGGAAT 58.527 33.333 0.00 0.00 33.12 3.01
1072 1180 8.971073 TCTTTCTCTATTGGAAATTTGGAATCC 58.029 33.333 0.00 0.00 33.12 3.01
1077 1185 8.434589 TCTATTGGAAATTTGGAATCCTTTGT 57.565 30.769 0.00 0.00 34.24 2.83
1086 1194 7.787623 ATTTGGAATCCTTTGTCTCTTCATT 57.212 32.000 0.00 0.00 0.00 2.57
1107 1215 7.520798 TCATTATTGGAGATCCTAGCACAAAT 58.479 34.615 0.00 0.00 36.82 2.32
1108 1216 8.000709 TCATTATTGGAGATCCTAGCACAAATT 58.999 33.333 0.00 0.00 36.82 1.82
1111 1219 4.517285 TGGAGATCCTAGCACAAATTCAC 58.483 43.478 0.00 0.00 36.82 3.18
1113 1226 4.943705 GGAGATCCTAGCACAAATTCACAA 59.056 41.667 0.00 0.00 0.00 3.33
1118 1231 2.490328 AGCACAAATTCACAACCACG 57.510 45.000 0.00 0.00 0.00 4.94
1128 1241 2.176546 CAACCACGAGCCAATGCG 59.823 61.111 0.00 0.00 44.33 4.73
1130 1243 1.377202 AACCACGAGCCAATGCGAT 60.377 52.632 0.00 0.00 44.33 4.58
1131 1244 1.369091 AACCACGAGCCAATGCGATC 61.369 55.000 0.00 0.00 44.33 3.69
1133 1246 1.640069 CACGAGCCAATGCGATCTG 59.360 57.895 0.00 0.00 44.33 2.90
1145 1258 2.659731 GCGATCTGCAGAATTAGCAC 57.340 50.000 22.50 2.56 45.45 4.40
1148 1263 3.064545 GCGATCTGCAGAATTAGCACTTT 59.935 43.478 22.50 0.00 45.45 2.66
1154 1269 6.643388 TCTGCAGAATTAGCACTTTGATAGA 58.357 36.000 15.67 0.00 37.02 1.98
1155 1270 6.536582 TCTGCAGAATTAGCACTTTGATAGAC 59.463 38.462 15.67 0.00 37.02 2.59
1156 1271 6.409704 TGCAGAATTAGCACTTTGATAGACT 58.590 36.000 1.19 0.00 37.02 3.24
1163 1278 7.776933 TTAGCACTTTGATAGACTATTGCAG 57.223 36.000 15.20 6.55 0.00 4.41
1170 1285 7.995488 ACTTTGATAGACTATTGCAGCCTTTAT 59.005 33.333 0.00 0.00 0.00 1.40
1174 1289 7.445402 TGATAGACTATTGCAGCCTTTATTTCC 59.555 37.037 0.00 0.00 0.00 3.13
1177 1292 6.608808 AGACTATTGCAGCCTTTATTTCCAAT 59.391 34.615 0.00 0.00 0.00 3.16
1183 1298 5.951747 TGCAGCCTTTATTTCCAATCTAACT 59.048 36.000 0.00 0.00 0.00 2.24
1184 1299 6.127647 TGCAGCCTTTATTTCCAATCTAACTG 60.128 38.462 0.00 0.00 0.00 3.16
1189 1304 7.201857 GCCTTTATTTCCAATCTAACTGATGCT 60.202 37.037 0.00 0.00 35.21 3.79
1193 1308 9.851686 TTATTTCCAATCTAACTGATGCTATGT 57.148 29.630 0.00 0.00 35.21 2.29
1196 1311 9.494271 TTTCCAATCTAACTGATGCTATGTATC 57.506 33.333 0.00 0.00 35.21 2.24
1212 1327 9.566723 TGCTATGTATCGCAAACACATATGTGC 62.567 40.741 31.19 18.59 40.30 4.57
1236 1351 2.577700 CAGCTAGTGGAGGACGAGTAT 58.422 52.381 0.00 0.00 30.27 2.12
1374 1489 2.202810 GAGGAAGAAGAGCCGCCG 60.203 66.667 0.00 0.00 0.00 6.46
1413 1528 3.591527 TCCTTTCCTTCAGGGAGCAATTA 59.408 43.478 0.00 0.00 46.01 1.40
1452 1567 0.246635 AACATCAGTCTAACGGCGCT 59.753 50.000 6.90 0.00 0.00 5.92
1534 1649 1.864711 TCGCTCGGTCTCTTGTTTTTG 59.135 47.619 0.00 0.00 0.00 2.44
1661 1777 4.554036 GAGGCGGGGTGCTCATCC 62.554 72.222 0.00 0.00 45.43 3.51
1710 1826 4.557695 CGTCCAGAGTATGTCCTGCTAATC 60.558 50.000 0.00 0.00 0.00 1.75
1735 1852 5.886960 ACTGTTTTGATCCTGAAGTATGC 57.113 39.130 0.00 0.00 0.00 3.14
1773 1890 1.066143 GGTGACTCACCGGAACATCAT 60.066 52.381 9.46 0.00 44.95 2.45
1778 1895 6.046593 GTGACTCACCGGAACATCATAATTA 58.953 40.000 9.46 0.00 0.00 1.40
1794 1911 7.812690 TCATAATTATCTGCAGAAACATGCT 57.187 32.000 22.50 4.57 46.63 3.79
1803 1920 0.035317 AGAAACATGCTGCTCCGTCA 59.965 50.000 0.00 0.00 0.00 4.35
1817 1934 3.258225 CGTCATCGGCTTCGAAGAT 57.742 52.632 28.95 10.86 46.60 2.40
1818 1935 0.848942 CGTCATCGGCTTCGAAGATG 59.151 55.000 28.95 21.50 46.60 2.90
1851 1968 1.675310 CGCCCATGAGCAGAAACCA 60.675 57.895 0.00 0.00 0.00 3.67
1899 2016 4.782019 TTGGCTTTGACATTACCACATC 57.218 40.909 0.00 0.00 0.00 3.06
1929 2046 5.633830 AACTTGTTATGCTGTTGAGATGG 57.366 39.130 0.00 0.00 0.00 3.51
1930 2047 3.441572 ACTTGTTATGCTGTTGAGATGGC 59.558 43.478 0.00 0.00 0.00 4.40
1932 2049 3.623703 TGTTATGCTGTTGAGATGGCAT 58.376 40.909 0.00 0.00 45.57 4.40
1933 2050 4.779696 TGTTATGCTGTTGAGATGGCATA 58.220 39.130 0.00 0.00 43.74 3.14
1934 2051 5.379187 TGTTATGCTGTTGAGATGGCATAT 58.621 37.500 0.00 0.00 43.88 1.78
1935 2052 5.239963 TGTTATGCTGTTGAGATGGCATATG 59.760 40.000 0.00 0.00 43.88 1.78
1936 2053 3.564053 TGCTGTTGAGATGGCATATGA 57.436 42.857 6.97 0.00 0.00 2.15
1937 2054 3.473625 TGCTGTTGAGATGGCATATGAG 58.526 45.455 6.97 0.00 0.00 2.90
1938 2055 3.135167 TGCTGTTGAGATGGCATATGAGA 59.865 43.478 6.97 0.00 0.00 3.27
1939 2056 4.132336 GCTGTTGAGATGGCATATGAGAA 58.868 43.478 6.97 0.00 0.00 2.87
1940 2057 4.760715 GCTGTTGAGATGGCATATGAGAAT 59.239 41.667 6.97 0.00 0.00 2.40
1941 2058 5.241064 GCTGTTGAGATGGCATATGAGAATT 59.759 40.000 6.97 0.00 0.00 2.17
1942 2059 6.238953 GCTGTTGAGATGGCATATGAGAATTT 60.239 38.462 6.97 0.00 0.00 1.82
1943 2060 7.034685 TGTTGAGATGGCATATGAGAATTTG 57.965 36.000 6.97 0.00 0.00 2.32
1944 2061 6.040054 TGTTGAGATGGCATATGAGAATTTGG 59.960 38.462 6.97 0.00 0.00 3.28
1945 2062 5.698104 TGAGATGGCATATGAGAATTTGGT 58.302 37.500 6.97 0.00 0.00 3.67
2087 2204 2.474526 CGTGCAGAAAATAAGCCTGTCG 60.475 50.000 0.00 0.00 0.00 4.35
2185 2315 7.599171 TGACATTGTGTATATATGGTAGACGG 58.401 38.462 0.00 0.00 0.00 4.79
2235 2365 1.599071 CTGCTGCGACAAACAAGAAGA 59.401 47.619 0.00 0.00 0.00 2.87
2318 2451 1.807814 ACAAGGTGGTCTCTCAGGTT 58.192 50.000 0.00 0.00 0.00 3.50
2334 2467 2.303022 CAGGTTAAGAAGGAGCCACTGA 59.697 50.000 0.00 0.00 0.00 3.41
2408 2541 2.030562 ACCACCAAAGCTCGTCCG 59.969 61.111 0.00 0.00 0.00 4.79
2491 2624 3.376918 GTTGCCTTCTGCCCAGCC 61.377 66.667 0.00 0.00 40.16 4.85
2791 2952 8.592809 AGGAATGTGTATCTGAATCTATTCCTC 58.407 37.037 15.05 0.62 45.68 3.71
2820 2981 1.600957 CAGCCATCTCCAATAAGTGCG 59.399 52.381 0.00 0.00 0.00 5.34
2987 3151 0.896479 TGTTCACCGACCTCGATCCA 60.896 55.000 0.00 0.00 43.02 3.41
3024 3188 1.127343 AGCCCACTAGAGATGAAGCC 58.873 55.000 0.00 0.00 0.00 4.35
3232 3421 5.894807 CAAACGATGATTTTGCCTATTCCT 58.105 37.500 0.00 0.00 0.00 3.36
3243 3432 4.989279 TGCCTATTCCTTGCTGATTTTC 57.011 40.909 0.00 0.00 0.00 2.29
3314 3503 3.513515 GAGGATGAAGAGGAATATCGCCT 59.486 47.826 0.00 0.00 38.81 5.52
3322 3511 2.999355 GAGGAATATCGCCTGATTCAGC 59.001 50.000 8.23 3.45 35.44 4.26
3327 3516 1.950828 ATCGCCTGATTCAGCAAGAG 58.049 50.000 8.23 0.00 0.00 2.85
3336 3525 1.820010 TTCAGCAAGAGGAGCAGCGA 61.820 55.000 0.00 0.00 0.00 4.93
3363 3555 1.136224 GCGAAGAAGAAGAAGCAACGG 60.136 52.381 0.00 0.00 0.00 4.44
3379 3571 3.770666 CAACGGACAGAATCGTAGACAT 58.229 45.455 0.00 0.00 42.51 3.06
3381 3573 3.770666 ACGGACAGAATCGTAGACATTG 58.229 45.455 0.00 0.00 42.51 2.82
3400 3592 2.033372 TGCCATGGCCAGATTGTATTG 58.967 47.619 33.44 0.88 41.09 1.90
3408 3600 3.555966 GCCAGATTGTATTGCCCTAGTT 58.444 45.455 0.00 0.00 0.00 2.24
3418 3610 9.944376 ATTGTATTGCCCTAGTTATATAGTGTG 57.056 33.333 0.00 0.00 0.00 3.82
3419 3611 7.383687 TGTATTGCCCTAGTTATATAGTGTGC 58.616 38.462 0.00 0.00 0.00 4.57
3459 3653 3.056107 TCCAGGACATCAAGTTAAGGACG 60.056 47.826 0.00 0.00 0.00 4.79
3467 3661 5.071250 ACATCAAGTTAAGGACGGCCATATA 59.929 40.000 11.69 0.00 36.29 0.86
3477 3671 4.402793 AGGACGGCCATATATCATGAGTAC 59.597 45.833 11.69 0.00 36.29 2.73
3511 3705 9.661563 AGACTACATTTTGACGGTTCATATTAA 57.338 29.630 0.00 0.00 0.00 1.40
3534 3730 7.481275 AATTGCAACATGGTAGTTTTTGAAG 57.519 32.000 0.00 0.00 0.00 3.02
3779 3980 5.192327 AGTTTTGGAGATGCTTTCAACTG 57.808 39.130 0.00 0.00 0.00 3.16
3790 3991 1.800586 CTTTCAACTGCTGCGCTCTAA 59.199 47.619 9.73 0.00 0.00 2.10
3838 4039 4.584874 TCCTTAAGAATTCGAACCATGCA 58.415 39.130 3.36 0.00 0.00 3.96
3840 4041 4.201950 CCTTAAGAATTCGAACCATGCAGG 60.202 45.833 3.36 0.00 45.67 4.85
3882 4083 8.908786 TGTTAAGACAGATTGAGAGAAAATGT 57.091 30.769 0.00 0.00 0.00 2.71
3959 4164 6.707440 TGCCTAAATTGAAGTCAAGTCAAA 57.293 33.333 0.00 0.00 38.44 2.69
4031 4236 9.669353 CCAATATAAAAGGATTCAACTCAATCG 57.331 33.333 0.00 0.00 34.08 3.34
4035 4240 2.893637 AGGATTCAACTCAATCGACCG 58.106 47.619 0.00 0.00 34.08 4.79
4036 4241 2.233922 AGGATTCAACTCAATCGACCGT 59.766 45.455 0.00 0.00 34.08 4.83
4037 4242 3.446161 AGGATTCAACTCAATCGACCGTA 59.554 43.478 0.00 0.00 34.08 4.02
4047 4548 3.930229 TCAATCGACCGTAAATTCACCTG 59.070 43.478 0.00 0.00 0.00 4.00
4048 4549 1.717194 TCGACCGTAAATTCACCTGC 58.283 50.000 0.00 0.00 0.00 4.85
4112 4613 5.818136 ATCTAATAACAACGTGCATTGCT 57.182 34.783 10.49 0.00 32.47 3.91
4113 4614 5.621197 TCTAATAACAACGTGCATTGCTT 57.379 34.783 10.49 0.00 32.47 3.91
4126 4627 5.218885 GTGCATTGCTTGTACACATTTACA 58.781 37.500 10.49 0.00 40.35 2.41
4128 4629 5.218885 GCATTGCTTGTACACATTTACACA 58.781 37.500 0.16 0.00 31.53 3.72
4133 4634 8.789881 TTGCTTGTACACATTTACACATTTAC 57.210 30.769 0.00 0.00 31.53 2.01
4134 4635 7.364200 TGCTTGTACACATTTACACATTTACC 58.636 34.615 0.00 0.00 31.53 2.85
4135 4636 7.013369 TGCTTGTACACATTTACACATTTACCA 59.987 33.333 0.00 0.00 31.53 3.25
4136 4637 7.537306 GCTTGTACACATTTACACATTTACCAG 59.463 37.037 0.00 0.00 31.53 4.00
4137 4638 8.453238 TTGTACACATTTACACATTTACCAGT 57.547 30.769 0.00 0.00 31.53 4.00
4138 4639 8.453238 TGTACACATTTACACATTTACCAGTT 57.547 30.769 0.00 0.00 0.00 3.16
4139 4640 8.904834 TGTACACATTTACACATTTACCAGTTT 58.095 29.630 0.00 0.00 0.00 2.66
4267 4785 0.514255 GGCAAACCCGTACTTTCGTC 59.486 55.000 0.00 0.00 0.00 4.20
4327 4845 2.006888 ACATCCACGCTGAAATAACCG 58.993 47.619 0.00 0.00 0.00 4.44
4334 4852 4.472286 CACGCTGAAATAACCGACAAAAT 58.528 39.130 0.00 0.00 0.00 1.82
4359 4877 4.872691 CCTGCAGTAAATGACCTGAACTAG 59.127 45.833 13.81 0.00 0.00 2.57
4360 4878 5.482908 CTGCAGTAAATGACCTGAACTAGT 58.517 41.667 5.25 0.00 0.00 2.57
4361 4879 6.351033 CCTGCAGTAAATGACCTGAACTAGTA 60.351 42.308 13.81 0.00 0.00 1.82
4368 4886 2.228103 TGACCTGAACTAGTACGTGCAG 59.772 50.000 6.38 4.10 39.78 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.053662 GCAAACTATGCGGTCGGTA 57.946 52.632 0.00 0.00 46.87 4.02
32 33 4.022416 TGCTGAAAAATCGTGGCAAACTAT 60.022 37.500 0.00 0.00 0.00 2.12
33 34 3.316588 TGCTGAAAAATCGTGGCAAACTA 59.683 39.130 0.00 0.00 0.00 2.24
35 36 2.468831 TGCTGAAAAATCGTGGCAAAC 58.531 42.857 0.00 0.00 0.00 2.93
36 37 2.360483 TCTGCTGAAAAATCGTGGCAAA 59.640 40.909 0.00 0.00 0.00 3.68
37 38 1.952990 TCTGCTGAAAAATCGTGGCAA 59.047 42.857 0.00 0.00 0.00 4.52
38 39 1.603456 TCTGCTGAAAAATCGTGGCA 58.397 45.000 0.00 0.00 0.00 4.92
72 74 2.375174 TCTGATCCCGAATTAATGGGGG 59.625 50.000 19.66 17.44 46.03 5.40
73 75 3.788227 TCTGATCCCGAATTAATGGGG 57.212 47.619 15.66 15.66 46.03 4.96
119 121 2.579787 CGTGGTGATCGCGGACTC 60.580 66.667 6.13 1.38 44.78 3.36
137 139 1.327690 GGATCGTGGTCAGCCCTGTA 61.328 60.000 0.00 0.00 0.00 2.74
140 142 2.039624 AGGATCGTGGTCAGCCCT 59.960 61.111 0.00 0.00 0.00 5.19
141 143 2.187946 CAGGATCGTGGTCAGCCC 59.812 66.667 7.54 0.00 0.00 5.19
142 144 2.512515 GCAGGATCGTGGTCAGCC 60.513 66.667 16.66 0.00 0.00 4.85
143 145 2.512515 GGCAGGATCGTGGTCAGC 60.513 66.667 16.66 2.07 0.00 4.26
161 177 1.974236 AGAACAGGAGTCAGGACAAGG 59.026 52.381 1.84 0.00 0.00 3.61
162 178 2.028567 GGAGAACAGGAGTCAGGACAAG 60.029 54.545 1.84 0.00 0.00 3.16
163 179 1.971357 GGAGAACAGGAGTCAGGACAA 59.029 52.381 1.84 0.00 0.00 3.18
164 180 1.633774 GGAGAACAGGAGTCAGGACA 58.366 55.000 1.84 0.00 0.00 4.02
165 181 0.528470 CGGAGAACAGGAGTCAGGAC 59.472 60.000 0.00 0.00 0.00 3.85
166 182 0.612174 CCGGAGAACAGGAGTCAGGA 60.612 60.000 0.00 0.00 33.26 3.86
167 183 1.608717 CCCGGAGAACAGGAGTCAGG 61.609 65.000 0.73 0.00 33.26 3.86
168 184 0.900647 ACCCGGAGAACAGGAGTCAG 60.901 60.000 0.73 0.00 33.26 3.51
169 185 1.155390 ACCCGGAGAACAGGAGTCA 59.845 57.895 0.73 0.00 33.26 3.41
170 186 1.592223 CACCCGGAGAACAGGAGTC 59.408 63.158 0.73 0.00 33.26 3.36
171 187 2.584391 GCACCCGGAGAACAGGAGT 61.584 63.158 0.73 0.00 33.26 3.85
172 188 2.266055 GCACCCGGAGAACAGGAG 59.734 66.667 0.73 0.00 33.26 3.69
173 189 3.691342 CGCACCCGGAGAACAGGA 61.691 66.667 0.73 0.00 33.26 3.86
174 190 2.642254 TACGCACCCGGAGAACAGG 61.642 63.158 0.73 0.00 39.22 4.00
175 191 1.445582 GTACGCACCCGGAGAACAG 60.446 63.158 0.73 0.00 39.22 3.16
176 192 1.537814 ATGTACGCACCCGGAGAACA 61.538 55.000 0.73 0.00 39.22 3.18
177 193 1.082117 CATGTACGCACCCGGAGAAC 61.082 60.000 0.73 0.00 39.22 3.01
178 194 1.216977 CATGTACGCACCCGGAGAA 59.783 57.895 0.73 0.00 39.22 2.87
179 195 2.889617 CATGTACGCACCCGGAGA 59.110 61.111 0.73 0.00 39.22 3.71
180 196 2.890474 GCATGTACGCACCCGGAG 60.890 66.667 0.73 0.00 39.22 4.63
181 197 4.805231 CGCATGTACGCACCCGGA 62.805 66.667 0.73 0.00 39.22 5.14
212 228 4.767255 CCACGTGCCAGGGAGAGC 62.767 72.222 10.91 0.00 0.00 4.09
237 253 1.997874 CCAACCCTCCCCTCCTCTG 60.998 68.421 0.00 0.00 0.00 3.35
238 254 1.761780 TTCCAACCCTCCCCTCCTCT 61.762 60.000 0.00 0.00 0.00 3.69
273 311 2.482374 CGTGACGTAGGTCGACCC 59.518 66.667 30.82 15.65 46.49 4.46
287 325 1.660575 GTCATATCCCGCGTCCGTG 60.661 63.158 4.92 0.00 0.00 4.94
305 343 3.487202 CGCAACATCACCGGTCCG 61.487 66.667 2.59 3.60 0.00 4.79
346 384 1.925455 TGGGAGAAGGGAAGGCCAG 60.925 63.158 5.01 0.00 35.15 4.85
350 388 1.685820 GTGGTGGGAGAAGGGAAGG 59.314 63.158 0.00 0.00 0.00 3.46
351 389 1.685820 GGTGGTGGGAGAAGGGAAG 59.314 63.158 0.00 0.00 0.00 3.46
352 390 1.850755 GGGTGGTGGGAGAAGGGAA 60.851 63.158 0.00 0.00 0.00 3.97
353 391 2.204090 GGGTGGTGGGAGAAGGGA 60.204 66.667 0.00 0.00 0.00 4.20
356 394 2.214216 TCGTGGGTGGTGGGAGAAG 61.214 63.158 0.00 0.00 0.00 2.85
358 396 2.920912 GTCGTGGGTGGTGGGAGA 60.921 66.667 0.00 0.00 0.00 3.71
639 703 1.373059 GATCAATCGAGGAGGGGCC 59.627 63.158 0.00 0.00 0.00 5.80
664 728 4.267503 GACGATCGAGCGGGGGTC 62.268 72.222 28.05 11.88 35.12 4.46
665 729 2.971095 TATGACGATCGAGCGGGGGT 62.971 60.000 28.05 12.36 35.12 4.95
666 730 2.265904 TATGACGATCGAGCGGGGG 61.266 63.158 28.05 0.00 35.12 5.40
667 731 1.081376 GTATGACGATCGAGCGGGG 60.081 63.158 28.05 0.00 35.12 5.73
668 732 1.440518 CGTATGACGATCGAGCGGG 60.441 63.158 28.05 0.23 46.05 6.13
669 733 0.721811 GACGTATGACGATCGAGCGG 60.722 60.000 28.05 10.61 46.05 5.52
670 734 0.042448 TGACGTATGACGATCGAGCG 60.042 55.000 23.12 23.12 46.05 5.03
671 735 1.660614 CCTGACGTATGACGATCGAGC 60.661 57.143 24.34 13.69 46.05 5.03
672 736 1.598132 ACCTGACGTATGACGATCGAG 59.402 52.381 24.34 4.83 46.05 4.04
673 737 1.329599 CACCTGACGTATGACGATCGA 59.670 52.381 24.34 0.00 46.05 3.59
674 738 1.329599 TCACCTGACGTATGACGATCG 59.670 52.381 14.88 14.88 46.05 3.69
675 739 2.855187 GCTCACCTGACGTATGACGATC 60.855 54.545 5.94 0.94 46.05 3.69
676 740 1.065701 GCTCACCTGACGTATGACGAT 59.934 52.381 5.94 0.00 46.05 3.73
677 741 0.450583 GCTCACCTGACGTATGACGA 59.549 55.000 5.94 0.00 46.05 4.20
679 743 1.746220 AGAGCTCACCTGACGTATGAC 59.254 52.381 17.77 0.00 0.00 3.06
680 744 2.017782 GAGAGCTCACCTGACGTATGA 58.982 52.381 17.77 0.00 0.00 2.15
681 745 2.020720 AGAGAGCTCACCTGACGTATG 58.979 52.381 17.77 0.00 0.00 2.39
682 746 2.294074 GAGAGAGCTCACCTGACGTAT 58.706 52.381 17.77 0.00 40.96 3.06
683 747 1.740297 GAGAGAGCTCACCTGACGTA 58.260 55.000 17.77 0.00 40.96 3.57
684 748 1.302383 CGAGAGAGCTCACCTGACGT 61.302 60.000 17.77 0.00 41.36 4.34
685 749 1.302383 ACGAGAGAGCTCACCTGACG 61.302 60.000 17.77 14.37 41.36 4.35
686 750 0.885196 AACGAGAGAGCTCACCTGAC 59.115 55.000 17.77 1.09 41.36 3.51
687 751 1.169577 GAACGAGAGAGCTCACCTGA 58.830 55.000 17.77 0.00 41.36 3.86
728 796 3.497332 GAAAAACCAGGAACCCTAGCTT 58.503 45.455 0.00 0.00 29.64 3.74
740 808 3.234386 GAGAAATTCGGCGAAAAACCAG 58.766 45.455 27.40 0.00 0.00 4.00
755 823 2.983433 CTGCGATCCAGCGAGAAAT 58.017 52.632 0.00 0.00 40.67 2.17
756 824 4.502263 CTGCGATCCAGCGAGAAA 57.498 55.556 0.00 0.00 40.67 2.52
771 852 0.602905 AGAAGACGTTTTCCGGGCTG 60.603 55.000 14.66 0.00 42.24 4.85
772 853 0.320508 GAGAAGACGTTTTCCGGGCT 60.321 55.000 14.66 0.00 42.24 5.19
773 854 1.623973 CGAGAAGACGTTTTCCGGGC 61.624 60.000 14.66 2.62 42.24 6.13
793 874 5.636543 AGATTTACGTCGAAAAGGAAACGAT 59.363 36.000 0.00 0.00 38.44 3.73
794 875 4.984161 AGATTTACGTCGAAAAGGAAACGA 59.016 37.500 0.00 0.00 38.44 3.85
795 876 5.260027 AGATTTACGTCGAAAAGGAAACG 57.740 39.130 0.00 0.00 40.77 3.60
796 877 6.576313 GGAAAGATTTACGTCGAAAAGGAAAC 59.424 38.462 0.00 0.00 0.00 2.78
822 903 3.791973 AAACAGATTTGTTGCACCGAA 57.208 38.095 1.85 0.00 46.54 4.30
851 932 2.464459 GCCTGCAAATCGTCTCCGG 61.464 63.158 0.00 0.00 33.95 5.14
853 934 0.811616 ATCGCCTGCAAATCGTCTCC 60.812 55.000 0.00 0.00 0.00 3.71
858 939 0.729116 ACAAGATCGCCTGCAAATCG 59.271 50.000 0.00 0.00 0.00 3.34
859 940 2.927553 AACAAGATCGCCTGCAAATC 57.072 45.000 0.00 0.00 0.00 2.17
881 962 4.064388 TCATGATCGTGTTCAGCAAGAAA 58.936 39.130 14.52 0.00 38.94 2.52
911 992 9.559732 GGGTACGGTGTTTAATAAACCTATAAT 57.440 33.333 12.72 0.00 40.67 1.28
914 995 7.199167 AGGGTACGGTGTTTAATAAACCTAT 57.801 36.000 12.72 0.14 40.67 2.57
915 996 6.619329 AGGGTACGGTGTTTAATAAACCTA 57.381 37.500 12.72 0.00 40.67 3.08
916 997 5.503634 AGGGTACGGTGTTTAATAAACCT 57.496 39.130 12.72 0.00 40.67 3.50
917 998 6.238456 GCATAGGGTACGGTGTTTAATAAACC 60.238 42.308 12.72 4.97 40.67 3.27
918 999 6.509997 CGCATAGGGTACGGTGTTTAATAAAC 60.510 42.308 8.82 8.82 41.73 2.01
919 1000 5.523188 CGCATAGGGTACGGTGTTTAATAAA 59.477 40.000 0.00 0.00 0.00 1.40
922 1003 3.132646 TCGCATAGGGTACGGTGTTTAAT 59.867 43.478 0.00 0.00 0.00 1.40
923 1004 2.495270 TCGCATAGGGTACGGTGTTTAA 59.505 45.455 0.00 0.00 0.00 1.52
924 1005 2.098614 TCGCATAGGGTACGGTGTTTA 58.901 47.619 0.00 0.00 0.00 2.01
925 1006 0.896923 TCGCATAGGGTACGGTGTTT 59.103 50.000 0.00 0.00 0.00 2.83
926 1007 1.068127 GATCGCATAGGGTACGGTGTT 59.932 52.381 0.00 0.00 0.00 3.32
928 1009 0.386858 CGATCGCATAGGGTACGGTG 60.387 60.000 0.26 0.00 0.00 4.94
929 1010 0.820891 ACGATCGCATAGGGTACGGT 60.821 55.000 16.60 0.00 0.00 4.83
930 1011 0.313043 AACGATCGCATAGGGTACGG 59.687 55.000 16.60 0.00 0.00 4.02
931 1012 1.266175 AGAACGATCGCATAGGGTACG 59.734 52.381 16.60 0.00 0.00 3.67
933 1014 2.545113 GCAAGAACGATCGCATAGGGTA 60.545 50.000 16.60 0.00 0.00 3.69
937 1040 1.524355 CCTGCAAGAACGATCGCATAG 59.476 52.381 16.60 2.83 34.07 2.23
941 1046 1.709147 ATGCCTGCAAGAACGATCGC 61.709 55.000 16.60 0.00 34.07 4.58
954 1059 3.185246 ACTCCGAGTGATTAATGCCTG 57.815 47.619 0.00 0.00 0.00 4.85
963 1068 3.442625 TGTCGTATGAAACTCCGAGTGAT 59.557 43.478 0.65 0.00 0.00 3.06
964 1069 2.815503 TGTCGTATGAAACTCCGAGTGA 59.184 45.455 0.65 0.00 0.00 3.41
965 1070 3.211803 TGTCGTATGAAACTCCGAGTG 57.788 47.619 0.65 0.00 0.00 3.51
966 1071 3.504906 TCTTGTCGTATGAAACTCCGAGT 59.495 43.478 0.00 0.00 0.00 4.18
970 1075 4.567159 GGTGATCTTGTCGTATGAAACTCC 59.433 45.833 0.00 0.00 0.00 3.85
1003 1111 1.107945 TCATTGTCGTCATAGCCCGA 58.892 50.000 0.00 0.00 0.00 5.14
1011 1119 2.281517 ACGTTGGTTTCATTGTCGTCA 58.718 42.857 0.00 0.00 0.00 4.35
1034 1142 6.536582 CCAATAGAGAAAGAGCGAGATTGAAA 59.463 38.462 0.00 0.00 0.00 2.69
1035 1143 6.045318 CCAATAGAGAAAGAGCGAGATTGAA 58.955 40.000 0.00 0.00 0.00 2.69
1044 1152 7.396540 TCCAAATTTCCAATAGAGAAAGAGC 57.603 36.000 0.00 0.00 36.71 4.09
1053 1161 8.534496 AGACAAAGGATTCCAAATTTCCAATAG 58.466 33.333 5.29 0.00 31.65 1.73
1055 1163 7.236225 AGAGACAAAGGATTCCAAATTTCCAAT 59.764 33.333 5.29 0.00 31.65 3.16
1056 1164 6.554605 AGAGACAAAGGATTCCAAATTTCCAA 59.445 34.615 5.29 0.00 31.65 3.53
1057 1165 6.077322 AGAGACAAAGGATTCCAAATTTCCA 58.923 36.000 5.29 0.00 31.65 3.53
1058 1166 6.596309 AGAGACAAAGGATTCCAAATTTCC 57.404 37.500 5.29 0.00 0.00 3.13
1059 1167 7.661040 TGAAGAGACAAAGGATTCCAAATTTC 58.339 34.615 5.29 0.00 0.00 2.17
1060 1168 7.601705 TGAAGAGACAAAGGATTCCAAATTT 57.398 32.000 5.29 0.00 0.00 1.82
1062 1170 7.787623 AATGAAGAGACAAAGGATTCCAAAT 57.212 32.000 5.29 0.00 0.00 2.32
1063 1171 8.884124 ATAATGAAGAGACAAAGGATTCCAAA 57.116 30.769 5.29 0.00 0.00 3.28
1065 1173 7.340232 CCAATAATGAAGAGACAAAGGATTCCA 59.660 37.037 5.29 0.00 0.00 3.53
1066 1174 7.557719 TCCAATAATGAAGAGACAAAGGATTCC 59.442 37.037 0.00 0.00 0.00 3.01
1067 1175 8.511604 TCCAATAATGAAGAGACAAAGGATTC 57.488 34.615 0.00 0.00 0.00 2.52
1068 1176 8.331740 TCTCCAATAATGAAGAGACAAAGGATT 58.668 33.333 0.00 0.00 30.56 3.01
1070 1178 7.257790 TCTCCAATAATGAAGAGACAAAGGA 57.742 36.000 0.00 0.00 30.56 3.36
1071 1179 7.228308 GGATCTCCAATAATGAAGAGACAAAGG 59.772 40.741 0.00 0.00 38.15 3.11
1072 1180 7.992033 AGGATCTCCAATAATGAAGAGACAAAG 59.008 37.037 0.00 0.00 38.15 2.77
1077 1185 6.784473 TGCTAGGATCTCCAATAATGAAGAGA 59.216 38.462 0.00 0.00 39.56 3.10
1086 1194 6.767902 GTGAATTTGTGCTAGGATCTCCAATA 59.232 38.462 0.00 0.00 38.89 1.90
1107 1215 0.950836 CATTGGCTCGTGGTTGTGAA 59.049 50.000 0.00 0.00 0.00 3.18
1108 1216 1.514678 GCATTGGCTCGTGGTTGTGA 61.515 55.000 0.00 0.00 36.96 3.58
1111 1219 1.647545 ATCGCATTGGCTCGTGGTTG 61.648 55.000 0.00 0.00 38.10 3.77
1113 1226 1.815421 GATCGCATTGGCTCGTGGT 60.815 57.895 0.00 0.00 38.10 4.16
1128 1241 5.808042 TCAAAGTGCTAATTCTGCAGATC 57.192 39.130 19.04 5.46 41.41 2.75
1130 1243 6.536582 GTCTATCAAAGTGCTAATTCTGCAGA 59.463 38.462 13.74 13.74 41.41 4.26
1131 1244 6.538021 AGTCTATCAAAGTGCTAATTCTGCAG 59.462 38.462 7.63 7.63 41.41 4.41
1133 1246 6.917217 AGTCTATCAAAGTGCTAATTCTGC 57.083 37.500 0.00 0.00 0.00 4.26
1135 1248 9.050601 GCAATAGTCTATCAAAGTGCTAATTCT 57.949 33.333 6.31 0.00 0.00 2.40
1137 1250 8.737168 TGCAATAGTCTATCAAAGTGCTAATT 57.263 30.769 12.48 0.00 0.00 1.40
1139 1252 6.258727 GCTGCAATAGTCTATCAAAGTGCTAA 59.741 38.462 12.48 0.00 0.00 3.09
1141 1254 4.574013 GCTGCAATAGTCTATCAAAGTGCT 59.426 41.667 12.48 0.00 0.00 4.40
1142 1255 4.260948 GGCTGCAATAGTCTATCAAAGTGC 60.261 45.833 0.50 6.54 0.00 4.40
1143 1256 5.121811 AGGCTGCAATAGTCTATCAAAGTG 58.878 41.667 0.50 0.00 40.29 3.16
1144 1257 5.365021 AGGCTGCAATAGTCTATCAAAGT 57.635 39.130 0.50 0.00 40.29 2.66
1145 1258 6.690194 AAAGGCTGCAATAGTCTATCAAAG 57.310 37.500 0.50 0.00 41.53 2.77
1148 1263 7.445402 GGAAATAAAGGCTGCAATAGTCTATCA 59.555 37.037 0.50 0.00 41.53 2.15
1154 1269 6.608808 AGATTGGAAATAAAGGCTGCAATAGT 59.391 34.615 0.50 0.00 32.11 2.12
1155 1270 7.047460 AGATTGGAAATAAAGGCTGCAATAG 57.953 36.000 0.50 0.00 32.11 1.73
1156 1271 8.413229 GTTAGATTGGAAATAAAGGCTGCAATA 58.587 33.333 0.50 0.00 32.11 1.90
1163 1278 6.920210 GCATCAGTTAGATTGGAAATAAAGGC 59.080 38.462 0.00 0.00 33.72 4.35
1170 1285 9.494271 GATACATAGCATCAGTTAGATTGGAAA 57.506 33.333 0.00 0.00 33.72 3.13
1174 1289 6.587608 TGCGATACATAGCATCAGTTAGATTG 59.412 38.462 0.00 0.00 38.59 2.67
1177 1292 5.705609 TGCGATACATAGCATCAGTTAGA 57.294 39.130 0.00 0.00 38.59 2.10
1183 1298 4.187694 TGTGTTTGCGATACATAGCATCA 58.812 39.130 0.00 0.00 43.42 3.07
1184 1299 4.794248 TGTGTTTGCGATACATAGCATC 57.206 40.909 0.00 0.00 43.42 3.91
1291 1406 2.124693 GCTCCTCCTCGTCCTCCTG 61.125 68.421 0.00 0.00 0.00 3.86
1374 1489 3.056313 GATTTCCTGCGTGCCAGCC 62.056 63.158 0.00 0.00 40.36 4.85
1413 1528 5.995446 TGTTGTTTCCTTAATTTGGCCTTT 58.005 33.333 3.32 0.00 0.00 3.11
1452 1567 0.333993 AGCTAGGGTTCCCGTAGTCA 59.666 55.000 10.66 0.00 42.12 3.41
1473 1588 0.731514 GCGGTTGATCAGACGACGAA 60.732 55.000 20.77 0.00 0.00 3.85
1534 1649 7.498570 ACTGAAAGAGGATGCTAGAATCAAATC 59.501 37.037 12.98 7.27 37.43 2.17
1624 1740 3.335356 ATGAGCCGGGGAGCAAGTG 62.335 63.158 2.18 0.00 34.23 3.16
1661 1777 3.629398 GGTTCTGGTTCTCCTGCATTATG 59.371 47.826 0.00 0.00 33.50 1.90
1710 1826 6.583806 GCATACTTCAGGATCAAAACAGTTTG 59.416 38.462 0.00 0.00 44.71 2.93
1735 1852 2.287915 CACCGGACAGTTCAAAGAGTTG 59.712 50.000 9.46 0.00 35.95 3.16
1764 1881 8.623903 TGTTTCTGCAGATAATTATGATGTTCC 58.376 33.333 19.04 0.00 0.00 3.62
1803 1920 1.156645 GCTGCATCTTCGAAGCCGAT 61.157 55.000 20.56 6.43 45.10 4.18
1851 1968 4.884668 TCAAACCTGAGGTACGATCTTT 57.115 40.909 3.68 0.00 33.12 2.52
1932 2049 9.135189 CCCAAATTCTCATACCAAATTCTCATA 57.865 33.333 0.00 0.00 0.00 2.15
1933 2050 7.620888 ACCCAAATTCTCATACCAAATTCTCAT 59.379 33.333 0.00 0.00 0.00 2.90
1934 2051 6.953520 ACCCAAATTCTCATACCAAATTCTCA 59.046 34.615 0.00 0.00 0.00 3.27
1935 2052 7.260603 CACCCAAATTCTCATACCAAATTCTC 58.739 38.462 0.00 0.00 0.00 2.87
1936 2053 6.155049 CCACCCAAATTCTCATACCAAATTCT 59.845 38.462 0.00 0.00 0.00 2.40
1937 2054 6.070824 ACCACCCAAATTCTCATACCAAATTC 60.071 38.462 0.00 0.00 0.00 2.17
1938 2055 5.784906 ACCACCCAAATTCTCATACCAAATT 59.215 36.000 0.00 0.00 0.00 1.82
1939 2056 5.341169 ACCACCCAAATTCTCATACCAAAT 58.659 37.500 0.00 0.00 0.00 2.32
1940 2057 4.746466 ACCACCCAAATTCTCATACCAAA 58.254 39.130 0.00 0.00 0.00 3.28
1941 2058 4.396357 ACCACCCAAATTCTCATACCAA 57.604 40.909 0.00 0.00 0.00 3.67
1942 2059 4.396357 AACCACCCAAATTCTCATACCA 57.604 40.909 0.00 0.00 0.00 3.25
1943 2060 4.081697 CCAAACCACCCAAATTCTCATACC 60.082 45.833 0.00 0.00 0.00 2.73
1944 2061 4.620567 GCCAAACCACCCAAATTCTCATAC 60.621 45.833 0.00 0.00 0.00 2.39
1945 2062 3.513515 GCCAAACCACCCAAATTCTCATA 59.486 43.478 0.00 0.00 0.00 2.15
2087 2204 1.270550 CTCACCAGATTTTGTGGCCAC 59.729 52.381 29.67 29.67 38.83 5.01
2167 2295 4.952262 TCGCCGTCTACCATATATACAC 57.048 45.455 0.00 0.00 0.00 2.90
2185 2315 1.004504 GTTTCATCCGATGAGCTTCGC 60.005 52.381 10.91 0.00 40.94 4.70
2235 2365 1.259840 GCAGGATGGTTTGTGGGCAT 61.260 55.000 0.00 0.00 35.86 4.40
2318 2451 3.740115 GTTTGTCAGTGGCTCCTTCTTA 58.260 45.455 0.00 0.00 0.00 2.10
2334 2467 0.399075 ATCGGTTTCCTCCCGTTTGT 59.601 50.000 0.00 0.00 45.63 2.83
2382 2515 2.043852 TTTGGTGGTGCCGTTGGT 60.044 55.556 0.00 0.00 41.21 3.67
2424 2557 2.324330 GCGGGTTTTGGCCATTTGC 61.324 57.895 6.09 1.21 40.16 3.68
2515 2648 4.025858 GCTGCCTCTGACCCTGCA 62.026 66.667 0.00 0.00 0.00 4.41
2785 2946 1.260544 GGCTGCAAACAAGGAGGAAT 58.739 50.000 0.50 0.00 0.00 3.01
2791 2952 0.529378 GGAGATGGCTGCAAACAAGG 59.471 55.000 0.50 0.00 31.98 3.61
2820 2981 1.816074 TTGCGGGATCACTGTAAACC 58.184 50.000 0.00 0.00 0.00 3.27
2987 3151 2.754002 GGCTAGAACTACTTCACCGACT 59.246 50.000 0.00 0.00 0.00 4.18
3024 3188 0.311790 AGCACCACACAAATTGCTCG 59.688 50.000 0.00 0.00 41.53 5.03
3218 3407 5.945144 AATCAGCAAGGAATAGGCAAAAT 57.055 34.783 0.00 0.00 0.00 1.82
3228 3417 2.899256 CAAGGGGAAAATCAGCAAGGAA 59.101 45.455 0.00 0.00 0.00 3.36
3229 3418 2.528564 CAAGGGGAAAATCAGCAAGGA 58.471 47.619 0.00 0.00 0.00 3.36
3232 3421 0.975887 GGCAAGGGGAAAATCAGCAA 59.024 50.000 0.00 0.00 0.00 3.91
3243 3432 2.355007 CCAAAGCAAATAAGGCAAGGGG 60.355 50.000 0.00 0.00 0.00 4.79
3314 3503 1.678123 GCTGCTCCTCTTGCTGAATCA 60.678 52.381 0.00 0.00 0.00 2.57
3322 3511 1.519013 GCTCTCGCTGCTCCTCTTG 60.519 63.158 0.00 0.00 0.00 3.02
3336 3525 1.216710 CTTCTTCTTCGCCCGCTCT 59.783 57.895 0.00 0.00 0.00 4.09
3363 3555 3.521560 TGGCAATGTCTACGATTCTGTC 58.478 45.455 0.00 0.00 0.00 3.51
3379 3571 2.431419 CAATACAATCTGGCCATGGCAA 59.569 45.455 36.56 26.87 44.11 4.52
3381 3573 1.269936 GCAATACAATCTGGCCATGGC 60.270 52.381 29.47 29.47 41.06 4.40
3400 3592 5.986501 AGAGCACACTATATAACTAGGGC 57.013 43.478 0.00 0.00 0.00 5.19
3418 3610 7.011576 GTCCTGGAACTTAAGCTATAAAAGAGC 59.988 40.741 1.29 0.00 40.42 4.09
3419 3611 8.041323 TGTCCTGGAACTTAAGCTATAAAAGAG 58.959 37.037 1.29 0.00 0.00 2.85
3459 3653 6.109359 GTCTTGGTACTCATGATATATGGCC 58.891 44.000 0.00 0.00 33.08 5.36
3467 3661 4.274147 AGTCTCGTCTTGGTACTCATGAT 58.726 43.478 0.00 0.00 33.08 2.45
3477 3671 4.090066 CGTCAAAATGTAGTCTCGTCTTGG 59.910 45.833 0.00 0.00 0.00 3.61
3511 3705 6.815089 TCTTCAAAAACTACCATGTTGCAAT 58.185 32.000 0.59 0.00 0.00 3.56
3758 3954 3.737774 GCAGTTGAAAGCATCTCCAAAAC 59.262 43.478 0.00 0.00 0.00 2.43
3759 3955 3.638160 AGCAGTTGAAAGCATCTCCAAAA 59.362 39.130 0.00 0.00 0.00 2.44
3763 3964 1.135460 GCAGCAGTTGAAAGCATCTCC 60.135 52.381 0.00 0.00 0.00 3.71
3838 4039 4.778213 ACATAATACATGCAGTCCACCT 57.222 40.909 0.00 0.00 0.00 4.00
3840 4041 7.279981 TGTCTTAACATAATACATGCAGTCCAC 59.720 37.037 0.00 0.00 0.00 4.02
3841 4042 7.334858 TGTCTTAACATAATACATGCAGTCCA 58.665 34.615 0.00 0.00 0.00 4.02
3843 4044 8.648557 TCTGTCTTAACATAATACATGCAGTC 57.351 34.615 0.00 0.00 34.13 3.51
3844 4045 9.618890 AATCTGTCTTAACATAATACATGCAGT 57.381 29.630 0.00 0.00 34.13 4.40
3845 4046 9.874215 CAATCTGTCTTAACATAATACATGCAG 57.126 33.333 0.00 0.00 34.13 4.41
3856 4057 9.512588 ACATTTTCTCTCAATCTGTCTTAACAT 57.487 29.630 0.00 0.00 34.13 2.71
3857 4058 8.908786 ACATTTTCTCTCAATCTGTCTTAACA 57.091 30.769 0.00 0.00 0.00 2.41
3927 4128 6.094048 TGACTTCAATTTAGGCATGCTTACTC 59.906 38.462 18.92 0.00 0.00 2.59
4016 4221 2.618053 ACGGTCGATTGAGTTGAATCC 58.382 47.619 0.00 0.00 0.00 3.01
4026 4231 3.485216 GCAGGTGAATTTACGGTCGATTG 60.485 47.826 0.00 0.00 0.00 2.67
4028 4233 2.277084 GCAGGTGAATTTACGGTCGAT 58.723 47.619 0.00 0.00 0.00 3.59
4029 4234 1.001068 TGCAGGTGAATTTACGGTCGA 59.999 47.619 0.00 0.00 0.00 4.20
4030 4235 1.434555 TGCAGGTGAATTTACGGTCG 58.565 50.000 0.00 0.00 0.00 4.79
4031 4236 4.434713 AATTGCAGGTGAATTTACGGTC 57.565 40.909 0.00 0.00 0.00 4.79
4033 4238 7.807907 GGATATTAATTGCAGGTGAATTTACGG 59.192 37.037 0.00 0.00 0.00 4.02
4037 4242 7.986889 GGTTGGATATTAATTGCAGGTGAATTT 59.013 33.333 0.00 0.00 0.00 1.82
4101 4602 1.304254 TGTGTACAAGCAATGCACGT 58.696 45.000 8.35 6.38 33.23 4.49
4104 4605 5.218885 GTGTAAATGTGTACAAGCAATGCA 58.781 37.500 8.35 0.00 35.79 3.96
4105 4606 5.218885 TGTGTAAATGTGTACAAGCAATGC 58.781 37.500 0.00 0.00 35.79 3.56
4106 4607 7.872163 AATGTGTAAATGTGTACAAGCAATG 57.128 32.000 0.00 0.00 35.79 2.82
4112 4613 8.453238 ACTGGTAAATGTGTAAATGTGTACAA 57.547 30.769 0.00 0.00 35.79 2.41
4113 4614 8.453238 AACTGGTAAATGTGTAAATGTGTACA 57.547 30.769 0.00 0.00 0.00 2.90
4133 4634 8.980481 ACCAAATTGGATAGTCTATAAACTGG 57.020 34.615 20.25 4.84 40.96 4.00
4244 4762 2.603652 CGAAAGTACGGGTTTGCCAAAG 60.604 50.000 0.00 0.00 36.17 2.77
4245 4763 1.334243 CGAAAGTACGGGTTTGCCAAA 59.666 47.619 0.00 0.00 36.17 3.28
4246 4764 0.945813 CGAAAGTACGGGTTTGCCAA 59.054 50.000 0.00 0.00 36.17 4.52
4267 4785 6.338146 TGTGGATTACTTAGAGACCATTTCG 58.662 40.000 0.00 0.00 0.00 3.46
4327 4845 4.622740 GTCATTTACTGCAGGCATTTTGTC 59.377 41.667 19.93 2.37 0.00 3.18
4334 4852 1.350684 TCAGGTCATTTACTGCAGGCA 59.649 47.619 19.93 1.85 34.76 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.