Multiple sequence alignment - TraesCS6B01G278000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G278000 | chr6B | 100.000 | 5835 | 0 | 0 | 1 | 5835 | 503004024 | 503009858 | 0.000000e+00 | 10776.0 |
1 | TraesCS6B01G278000 | chr6B | 87.733 | 644 | 56 | 18 | 31 | 655 | 68210216 | 68209577 | 0.000000e+00 | 730.0 |
2 | TraesCS6B01G278000 | chr6B | 95.238 | 42 | 2 | 0 | 5447 | 5488 | 487142641 | 487142682 | 3.770000e-07 | 67.6 |
3 | TraesCS6B01G278000 | chr6D | 93.108 | 2336 | 126 | 21 | 3135 | 5448 | 320069781 | 320067459 | 0.000000e+00 | 3389.0 |
4 | TraesCS6B01G278000 | chr6D | 95.233 | 1951 | 61 | 13 | 676 | 2601 | 320072431 | 320070488 | 0.000000e+00 | 3059.0 |
5 | TraesCS6B01G278000 | chr6D | 94.334 | 353 | 15 | 5 | 5485 | 5835 | 41299802 | 41299453 | 2.390000e-148 | 536.0 |
6 | TraesCS6B01G278000 | chr6D | 92.401 | 329 | 20 | 4 | 2813 | 3139 | 320070148 | 320069823 | 1.150000e-126 | 464.0 |
7 | TraesCS6B01G278000 | chr6A | 91.779 | 2153 | 139 | 18 | 3309 | 5448 | 457586715 | 457584588 | 0.000000e+00 | 2961.0 |
8 | TraesCS6B01G278000 | chr6A | 94.040 | 755 | 42 | 1 | 1246 | 1997 | 457609655 | 457608901 | 0.000000e+00 | 1142.0 |
9 | TraesCS6B01G278000 | chr6A | 89.394 | 330 | 28 | 5 | 2820 | 3145 | 457603141 | 457602815 | 5.440000e-110 | 409.0 |
10 | TraesCS6B01G278000 | chr6A | 89.937 | 318 | 22 | 8 | 2393 | 2706 | 457603523 | 457603212 | 9.110000e-108 | 401.0 |
11 | TraesCS6B01G278000 | chr6A | 77.260 | 365 | 48 | 20 | 5485 | 5835 | 382070617 | 382070960 | 1.290000e-41 | 182.0 |
12 | TraesCS6B01G278000 | chr6A | 96.703 | 91 | 3 | 0 | 3194 | 3284 | 457602688 | 457602598 | 1.010000e-32 | 152.0 |
13 | TraesCS6B01G278000 | chr6A | 93.056 | 72 | 5 | 0 | 2742 | 2813 | 554452145 | 554452216 | 8.000000e-19 | 106.0 |
14 | TraesCS6B01G278000 | chr3A | 92.507 | 734 | 46 | 2 | 996 | 1729 | 653051596 | 653052320 | 0.000000e+00 | 1042.0 |
15 | TraesCS6B01G278000 | chr3A | 76.146 | 1287 | 228 | 55 | 3480 | 4721 | 100353336 | 100354588 | 2.330000e-168 | 603.0 |
16 | TraesCS6B01G278000 | chr4A | 91.045 | 670 | 36 | 8 | 1 | 657 | 734739650 | 734740308 | 0.000000e+00 | 883.0 |
17 | TraesCS6B01G278000 | chr4A | 89.851 | 670 | 37 | 11 | 1 | 657 | 736579418 | 736580069 | 0.000000e+00 | 832.0 |
18 | TraesCS6B01G278000 | chr4A | 77.660 | 1034 | 188 | 37 | 3482 | 4481 | 579527660 | 579526636 | 1.810000e-164 | 590.0 |
19 | TraesCS6B01G278000 | chr4A | 80.030 | 661 | 126 | 4 | 1618 | 2275 | 579528871 | 579528214 | 8.790000e-133 | 484.0 |
20 | TraesCS6B01G278000 | chr4A | 93.151 | 73 | 5 | 0 | 2741 | 2813 | 317649553 | 317649625 | 2.220000e-19 | 108.0 |
21 | TraesCS6B01G278000 | chr4A | 93.151 | 73 | 5 | 0 | 2741 | 2813 | 646314403 | 646314475 | 2.220000e-19 | 108.0 |
22 | TraesCS6B01G278000 | chr4A | 95.652 | 46 | 2 | 0 | 3221 | 3266 | 612057789 | 612057834 | 2.260000e-09 | 75.0 |
23 | TraesCS6B01G278000 | chr4B | 89.513 | 677 | 35 | 14 | 1 | 660 | 502725881 | 502725224 | 0.000000e+00 | 824.0 |
24 | TraesCS6B01G278000 | chr4B | 78.061 | 980 | 176 | 33 | 3474 | 4420 | 32971837 | 32972810 | 3.030000e-162 | 582.0 |
25 | TraesCS6B01G278000 | chr4B | 77.255 | 1042 | 187 | 43 | 3474 | 4478 | 34540933 | 34541961 | 3.050000e-157 | 566.0 |
26 | TraesCS6B01G278000 | chr4B | 79.066 | 664 | 133 | 5 | 1615 | 2275 | 32970636 | 32971296 | 8.920000e-123 | 451.0 |
27 | TraesCS6B01G278000 | chr4B | 93.151 | 73 | 5 | 0 | 2741 | 2813 | 370882522 | 370882594 | 2.220000e-19 | 108.0 |
28 | TraesCS6B01G278000 | chr4B | 91.667 | 72 | 6 | 0 | 2742 | 2813 | 108802300 | 108802229 | 3.720000e-17 | 100.0 |
29 | TraesCS6B01G278000 | chr4B | 83.333 | 90 | 10 | 2 | 3185 | 3269 | 32971559 | 32971648 | 1.740000e-10 | 78.7 |
30 | TraesCS6B01G278000 | chr5D | 77.734 | 1280 | 232 | 40 | 3483 | 4720 | 486908707 | 486907439 | 0.000000e+00 | 736.0 |
31 | TraesCS6B01G278000 | chr5D | 77.348 | 1267 | 248 | 32 | 3483 | 4720 | 486898117 | 486896861 | 0.000000e+00 | 713.0 |
32 | TraesCS6B01G278000 | chr5D | 78.086 | 1191 | 207 | 43 | 3482 | 4640 | 487006117 | 487007285 | 0.000000e+00 | 704.0 |
33 | TraesCS6B01G278000 | chr5D | 94.334 | 353 | 17 | 3 | 5485 | 5835 | 255131080 | 255131431 | 6.650000e-149 | 538.0 |
34 | TraesCS6B01G278000 | chr5D | 79.450 | 618 | 122 | 5 | 1662 | 2275 | 486909874 | 486909258 | 3.230000e-117 | 433.0 |
35 | TraesCS6B01G278000 | chr5D | 79.160 | 619 | 116 | 10 | 1662 | 2275 | 486899281 | 486898671 | 3.250000e-112 | 416.0 |
36 | TraesCS6B01G278000 | chr5D | 79.427 | 593 | 103 | 14 | 3902 | 4477 | 487173085 | 487172495 | 9.110000e-108 | 401.0 |
37 | TraesCS6B01G278000 | chr5D | 78.120 | 617 | 120 | 12 | 1662 | 2272 | 487004955 | 487005562 | 1.530000e-100 | 377.0 |
38 | TraesCS6B01G278000 | chr5D | 95.652 | 46 | 2 | 0 | 3221 | 3266 | 558947516 | 558947561 | 2.260000e-09 | 75.0 |
39 | TraesCS6B01G278000 | chr7A | 86.530 | 683 | 56 | 19 | 1 | 657 | 130199269 | 130199941 | 0.000000e+00 | 719.0 |
40 | TraesCS6B01G278000 | chr7A | 85.965 | 342 | 28 | 10 | 5497 | 5833 | 595020387 | 595020061 | 1.200000e-91 | 348.0 |
41 | TraesCS6B01G278000 | chr5B | 77.465 | 1278 | 238 | 37 | 3483 | 4720 | 598659021 | 598657754 | 0.000000e+00 | 719.0 |
42 | TraesCS6B01G278000 | chr5B | 88.226 | 603 | 53 | 11 | 1 | 591 | 669686757 | 669687353 | 0.000000e+00 | 704.0 |
43 | TraesCS6B01G278000 | chr5B | 85.928 | 668 | 69 | 21 | 1 | 657 | 348377286 | 348377939 | 0.000000e+00 | 689.0 |
44 | TraesCS6B01G278000 | chr5B | 77.628 | 1189 | 217 | 39 | 3488 | 4640 | 599122954 | 599121779 | 0.000000e+00 | 676.0 |
45 | TraesCS6B01G278000 | chr5B | 79.773 | 618 | 120 | 5 | 1662 | 2275 | 598660188 | 598659572 | 1.490000e-120 | 444.0 |
46 | TraesCS6B01G278000 | chr5B | 85.119 | 336 | 28 | 7 | 5502 | 5833 | 295888389 | 295888072 | 2.030000e-84 | 324.0 |
47 | TraesCS6B01G278000 | chr5A | 77.361 | 1281 | 235 | 42 | 3483 | 4720 | 607577831 | 607576563 | 0.000000e+00 | 708.0 |
48 | TraesCS6B01G278000 | chr1B | 77.255 | 1319 | 219 | 54 | 3454 | 4718 | 540138178 | 540139469 | 0.000000e+00 | 699.0 |
49 | TraesCS6B01G278000 | chr1B | 87.438 | 406 | 32 | 11 | 5448 | 5835 | 494770157 | 494770561 | 3.210000e-122 | 449.0 |
50 | TraesCS6B01G278000 | chr1B | 97.959 | 49 | 1 | 0 | 3221 | 3269 | 540137972 | 540138020 | 1.040000e-12 | 86.1 |
51 | TraesCS6B01G278000 | chr7B | 85.672 | 677 | 66 | 14 | 3 | 657 | 64085761 | 64086428 | 0.000000e+00 | 684.0 |
52 | TraesCS6B01G278000 | chr2B | 85.714 | 679 | 62 | 18 | 3 | 657 | 729531036 | 729530369 | 0.000000e+00 | 684.0 |
53 | TraesCS6B01G278000 | chr2B | 94.302 | 351 | 18 | 2 | 5487 | 5835 | 752100971 | 752101321 | 2.390000e-148 | 536.0 |
54 | TraesCS6B01G278000 | chr2B | 91.250 | 80 | 6 | 1 | 2735 | 2813 | 577237524 | 577237603 | 2.220000e-19 | 108.0 |
55 | TraesCS6B01G278000 | chr2B | 82.883 | 111 | 14 | 4 | 3 | 111 | 654507267 | 654507374 | 1.730000e-15 | 95.3 |
56 | TraesCS6B01G278000 | chr2B | 81.982 | 111 | 15 | 4 | 3 | 111 | 654478011 | 654478118 | 8.050000e-14 | 89.8 |
57 | TraesCS6B01G278000 | chr4D | 78.423 | 964 | 177 | 28 | 3482 | 4420 | 21695227 | 21694270 | 3.010000e-167 | 599.0 |
58 | TraesCS6B01G278000 | chr4D | 94.857 | 350 | 14 | 4 | 5485 | 5832 | 220644543 | 220644890 | 1.430000e-150 | 544.0 |
59 | TraesCS6B01G278000 | chr4D | 94.334 | 353 | 16 | 4 | 5485 | 5835 | 394354898 | 394354548 | 6.650000e-149 | 538.0 |
60 | TraesCS6B01G278000 | chr4D | 80.392 | 663 | 126 | 3 | 1615 | 2275 | 22572599 | 22573259 | 8.730000e-138 | 501.0 |
61 | TraesCS6B01G278000 | chr4D | 79.066 | 664 | 133 | 5 | 1618 | 2278 | 21696434 | 21695774 | 8.920000e-123 | 451.0 |
62 | TraesCS6B01G278000 | chr4D | 90.196 | 51 | 5 | 0 | 608 | 658 | 476332007 | 476332057 | 3.770000e-07 | 67.6 |
63 | TraesCS6B01G278000 | chr4D | 91.111 | 45 | 4 | 0 | 5449 | 5493 | 258249199 | 258249243 | 1.760000e-05 | 62.1 |
64 | TraesCS6B01G278000 | chr7D | 95.184 | 353 | 13 | 4 | 5485 | 5835 | 490843787 | 490843437 | 6.610000e-154 | 555.0 |
65 | TraesCS6B01G278000 | chr7D | 83.158 | 95 | 12 | 4 | 3185 | 3275 | 566321047 | 566321141 | 3.750000e-12 | 84.2 |
66 | TraesCS6B01G278000 | chr3D | 94.602 | 352 | 17 | 2 | 5485 | 5835 | 294516107 | 294515757 | 1.430000e-150 | 544.0 |
67 | TraesCS6B01G278000 | chr3D | 94.334 | 353 | 16 | 4 | 5485 | 5835 | 382831294 | 382831644 | 6.650000e-149 | 538.0 |
68 | TraesCS6B01G278000 | chr2D | 94.318 | 352 | 18 | 2 | 5485 | 5835 | 57068856 | 57069206 | 6.650000e-149 | 538.0 |
69 | TraesCS6B01G278000 | chr2A | 84.783 | 368 | 26 | 9 | 5485 | 5833 | 422599404 | 422599048 | 5.600000e-90 | 342.0 |
70 | TraesCS6B01G278000 | chr2A | 93.056 | 72 | 5 | 0 | 2742 | 2813 | 554015016 | 554014945 | 8.000000e-19 | 106.0 |
71 | TraesCS6B01G278000 | chr3B | 86.901 | 313 | 27 | 7 | 5449 | 5760 | 74824815 | 74825114 | 7.240000e-89 | 339.0 |
72 | TraesCS6B01G278000 | chr3B | 84.345 | 313 | 34 | 10 | 5450 | 5760 | 577347779 | 577347480 | 5.720000e-75 | 292.0 |
73 | TraesCS6B01G278000 | chr1A | 91.781 | 73 | 6 | 0 | 2741 | 2813 | 490419423 | 490419351 | 1.030000e-17 | 102.0 |
74 | TraesCS6B01G278000 | chr1A | 86.667 | 90 | 6 | 5 | 3185 | 3269 | 497751665 | 497751753 | 1.730000e-15 | 95.3 |
75 | TraesCS6B01G278000 | chr1D | 90.411 | 73 | 7 | 0 | 2741 | 2813 | 462960382 | 462960454 | 4.810000e-16 | 97.1 |
76 | TraesCS6B01G278000 | chr1D | 95.918 | 49 | 2 | 0 | 3221 | 3269 | 402136527 | 402136575 | 4.850000e-11 | 80.5 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G278000 | chr6B | 503004024 | 503009858 | 5834 | False | 10776.000000 | 10776 | 100.000000 | 1 | 5835 | 1 | chr6B.!!$F2 | 5834 |
1 | TraesCS6B01G278000 | chr6B | 68209577 | 68210216 | 639 | True | 730.000000 | 730 | 87.733000 | 31 | 655 | 1 | chr6B.!!$R1 | 624 |
2 | TraesCS6B01G278000 | chr6D | 320067459 | 320072431 | 4972 | True | 2304.000000 | 3389 | 93.580667 | 676 | 5448 | 3 | chr6D.!!$R2 | 4772 |
3 | TraesCS6B01G278000 | chr6A | 457584588 | 457586715 | 2127 | True | 2961.000000 | 2961 | 91.779000 | 3309 | 5448 | 1 | chr6A.!!$R1 | 2139 |
4 | TraesCS6B01G278000 | chr6A | 457608901 | 457609655 | 754 | True | 1142.000000 | 1142 | 94.040000 | 1246 | 1997 | 1 | chr6A.!!$R2 | 751 |
5 | TraesCS6B01G278000 | chr6A | 457602598 | 457603523 | 925 | True | 320.666667 | 409 | 92.011333 | 2393 | 3284 | 3 | chr6A.!!$R3 | 891 |
6 | TraesCS6B01G278000 | chr3A | 653051596 | 653052320 | 724 | False | 1042.000000 | 1042 | 92.507000 | 996 | 1729 | 1 | chr3A.!!$F2 | 733 |
7 | TraesCS6B01G278000 | chr3A | 100353336 | 100354588 | 1252 | False | 603.000000 | 603 | 76.146000 | 3480 | 4721 | 1 | chr3A.!!$F1 | 1241 |
8 | TraesCS6B01G278000 | chr4A | 734739650 | 734740308 | 658 | False | 883.000000 | 883 | 91.045000 | 1 | 657 | 1 | chr4A.!!$F4 | 656 |
9 | TraesCS6B01G278000 | chr4A | 736579418 | 736580069 | 651 | False | 832.000000 | 832 | 89.851000 | 1 | 657 | 1 | chr4A.!!$F5 | 656 |
10 | TraesCS6B01G278000 | chr4A | 579526636 | 579528871 | 2235 | True | 537.000000 | 590 | 78.845000 | 1618 | 4481 | 2 | chr4A.!!$R1 | 2863 |
11 | TraesCS6B01G278000 | chr4B | 502725224 | 502725881 | 657 | True | 824.000000 | 824 | 89.513000 | 1 | 660 | 1 | chr4B.!!$R2 | 659 |
12 | TraesCS6B01G278000 | chr4B | 34540933 | 34541961 | 1028 | False | 566.000000 | 566 | 77.255000 | 3474 | 4478 | 1 | chr4B.!!$F1 | 1004 |
13 | TraesCS6B01G278000 | chr4B | 32970636 | 32972810 | 2174 | False | 370.566667 | 582 | 80.153333 | 1615 | 4420 | 3 | chr4B.!!$F3 | 2805 |
14 | TraesCS6B01G278000 | chr5D | 486907439 | 486909874 | 2435 | True | 584.500000 | 736 | 78.592000 | 1662 | 4720 | 2 | chr5D.!!$R3 | 3058 |
15 | TraesCS6B01G278000 | chr5D | 486896861 | 486899281 | 2420 | True | 564.500000 | 713 | 78.254000 | 1662 | 4720 | 2 | chr5D.!!$R2 | 3058 |
16 | TraesCS6B01G278000 | chr5D | 487004955 | 487007285 | 2330 | False | 540.500000 | 704 | 78.103000 | 1662 | 4640 | 2 | chr5D.!!$F3 | 2978 |
17 | TraesCS6B01G278000 | chr5D | 487172495 | 487173085 | 590 | True | 401.000000 | 401 | 79.427000 | 3902 | 4477 | 1 | chr5D.!!$R1 | 575 |
18 | TraesCS6B01G278000 | chr7A | 130199269 | 130199941 | 672 | False | 719.000000 | 719 | 86.530000 | 1 | 657 | 1 | chr7A.!!$F1 | 656 |
19 | TraesCS6B01G278000 | chr5B | 669686757 | 669687353 | 596 | False | 704.000000 | 704 | 88.226000 | 1 | 591 | 1 | chr5B.!!$F2 | 590 |
20 | TraesCS6B01G278000 | chr5B | 348377286 | 348377939 | 653 | False | 689.000000 | 689 | 85.928000 | 1 | 657 | 1 | chr5B.!!$F1 | 656 |
21 | TraesCS6B01G278000 | chr5B | 599121779 | 599122954 | 1175 | True | 676.000000 | 676 | 77.628000 | 3488 | 4640 | 1 | chr5B.!!$R2 | 1152 |
22 | TraesCS6B01G278000 | chr5B | 598657754 | 598660188 | 2434 | True | 581.500000 | 719 | 78.619000 | 1662 | 4720 | 2 | chr5B.!!$R3 | 3058 |
23 | TraesCS6B01G278000 | chr5A | 607576563 | 607577831 | 1268 | True | 708.000000 | 708 | 77.361000 | 3483 | 4720 | 1 | chr5A.!!$R1 | 1237 |
24 | TraesCS6B01G278000 | chr1B | 540137972 | 540139469 | 1497 | False | 392.550000 | 699 | 87.607000 | 3221 | 4718 | 2 | chr1B.!!$F2 | 1497 |
25 | TraesCS6B01G278000 | chr7B | 64085761 | 64086428 | 667 | False | 684.000000 | 684 | 85.672000 | 3 | 657 | 1 | chr7B.!!$F1 | 654 |
26 | TraesCS6B01G278000 | chr2B | 729530369 | 729531036 | 667 | True | 684.000000 | 684 | 85.714000 | 3 | 657 | 1 | chr2B.!!$R1 | 654 |
27 | TraesCS6B01G278000 | chr4D | 21694270 | 21696434 | 2164 | True | 525.000000 | 599 | 78.744500 | 1618 | 4420 | 2 | chr4D.!!$R2 | 2802 |
28 | TraesCS6B01G278000 | chr4D | 22572599 | 22573259 | 660 | False | 501.000000 | 501 | 80.392000 | 1615 | 2275 | 1 | chr4D.!!$F1 | 660 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
544 | 580 | 0.035056 | AATCGGCTGGGAGAAGGTTG | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 | F |
667 | 713 | 0.109458 | GGTTTTTCCGGCGCTTAAGG | 60.109 | 55.000 | 7.64 | 6.38 | 0.00 | 2.69 | F |
1131 | 1182 | 0.179140 | GAGAGTTCTCGCTGAGGCTG | 60.179 | 60.000 | 0.00 | 0.00 | 36.09 | 4.85 | F |
1132 | 1183 | 0.610509 | AGAGTTCTCGCTGAGGCTGA | 60.611 | 55.000 | 0.00 | 0.00 | 36.09 | 4.26 | F |
2755 | 3016 | 1.141858 | GATACTGAAGGGGAGCCTTGG | 59.858 | 57.143 | 0.00 | 0.00 | 0.00 | 3.61 | F |
2780 | 3041 | 0.107831 | TGGTAAAGCTGCCGTCTTGT | 59.892 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 | F |
2790 | 3051 | 0.173708 | GCCGTCTTGTGACTAGGAGG | 59.826 | 60.000 | 0.00 | 0.00 | 40.86 | 4.30 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2515 | 2592 | 0.971386 | ATTTCTTGTTGCCCCTGCTG | 59.029 | 50.000 | 0.0 | 0.0 | 38.71 | 4.41 | R |
2616 | 2695 | 6.069705 | CCCCCTATAAACTAGGTCAAACAA | 57.930 | 41.667 | 0.0 | 0.0 | 32.88 | 2.83 | R |
2761 | 3022 | 0.107831 | ACAAGACGGCAGCTTTACCA | 59.892 | 50.000 | 0.0 | 0.0 | 0.00 | 3.25 | R |
2762 | 3023 | 0.517316 | CACAAGACGGCAGCTTTACC | 59.483 | 55.000 | 0.0 | 0.0 | 0.00 | 2.85 | R |
4743 | 5334 | 2.092049 | TCGCTAGGAACCTCCATCACTA | 60.092 | 50.000 | 0.0 | 0.0 | 39.61 | 2.74 | R |
4789 | 5380 | 0.609957 | TCGCTACGGGAAAGACCTCA | 60.610 | 55.000 | 0.0 | 0.0 | 38.98 | 3.86 | R |
4845 | 5436 | 1.822990 | CCAGCTCATTCACTTGCCATT | 59.177 | 47.619 | 0.0 | 0.0 | 0.00 | 3.16 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
162 | 164 | 9.179552 | CATGAATTCTTTTTGAATACGTGAACA | 57.820 | 29.630 | 7.05 | 0.00 | 43.99 | 3.18 |
290 | 299 | 8.934507 | AACATTTTCTGGAAACACGATTTTTA | 57.065 | 26.923 | 0.00 | 0.00 | 35.60 | 1.52 |
391 | 404 | 6.967135 | ACTTGAATAGGAAAACGGAAAGAAC | 58.033 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
527 | 554 | 4.810345 | TGGTTCCCAAAACCAGTAAGAAT | 58.190 | 39.130 | 5.56 | 0.00 | 44.74 | 2.40 |
544 | 580 | 0.035056 | AATCGGCTGGGAGAAGGTTG | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
657 | 703 | 1.807742 | TGCGTCCAATAGGTTTTTCCG | 59.192 | 47.619 | 0.00 | 0.00 | 41.99 | 4.30 |
659 | 705 | 1.131693 | CGTCCAATAGGTTTTTCCGGC | 59.868 | 52.381 | 0.00 | 0.00 | 41.99 | 6.13 |
660 | 706 | 1.131693 | GTCCAATAGGTTTTTCCGGCG | 59.868 | 52.381 | 0.00 | 0.00 | 41.99 | 6.46 |
661 | 707 | 0.179148 | CCAATAGGTTTTTCCGGCGC | 60.179 | 55.000 | 0.00 | 0.00 | 41.99 | 6.53 |
662 | 708 | 0.808755 | CAATAGGTTTTTCCGGCGCT | 59.191 | 50.000 | 7.64 | 0.00 | 41.99 | 5.92 |
663 | 709 | 1.201414 | CAATAGGTTTTTCCGGCGCTT | 59.799 | 47.619 | 7.64 | 0.00 | 41.99 | 4.68 |
664 | 710 | 2.406596 | ATAGGTTTTTCCGGCGCTTA | 57.593 | 45.000 | 7.64 | 0.00 | 41.99 | 3.09 |
665 | 711 | 2.181954 | TAGGTTTTTCCGGCGCTTAA | 57.818 | 45.000 | 7.64 | 0.00 | 41.99 | 1.85 |
666 | 712 | 0.879090 | AGGTTTTTCCGGCGCTTAAG | 59.121 | 50.000 | 7.64 | 0.00 | 41.99 | 1.85 |
667 | 713 | 0.109458 | GGTTTTTCCGGCGCTTAAGG | 60.109 | 55.000 | 7.64 | 6.38 | 0.00 | 2.69 |
668 | 714 | 0.731514 | GTTTTTCCGGCGCTTAAGGC | 60.732 | 55.000 | 7.64 | 6.03 | 37.64 | 4.35 |
679 | 725 | 2.649331 | GCTTAAGGCGCGATATAGGA | 57.351 | 50.000 | 12.10 | 0.00 | 0.00 | 2.94 |
680 | 726 | 2.955614 | GCTTAAGGCGCGATATAGGAA | 58.044 | 47.619 | 12.10 | 0.00 | 0.00 | 3.36 |
681 | 727 | 3.323243 | GCTTAAGGCGCGATATAGGAAA | 58.677 | 45.455 | 12.10 | 0.00 | 0.00 | 3.13 |
682 | 728 | 3.933332 | GCTTAAGGCGCGATATAGGAAAT | 59.067 | 43.478 | 12.10 | 0.00 | 0.00 | 2.17 |
725 | 771 | 2.747855 | GCGACCTGGAAGCCCAAG | 60.748 | 66.667 | 0.00 | 0.00 | 42.98 | 3.61 |
732 | 778 | 1.547372 | CCTGGAAGCCCAAGAACATTG | 59.453 | 52.381 | 0.00 | 0.00 | 42.98 | 2.82 |
758 | 804 | 9.140286 | GTTATTTTGAAGAATAAGCCCAAGAAC | 57.860 | 33.333 | 0.00 | 0.00 | 33.45 | 3.01 |
771 | 817 | 3.009723 | CCCAAGAACATTGCAGTACGAT | 58.990 | 45.455 | 0.00 | 0.00 | 0.00 | 3.73 |
825 | 876 | 5.221541 | ACGGATAATGATGAGACTTCCCTTC | 60.222 | 44.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1026 | 1077 | 3.319198 | GGAAGCACTCCCGACCCA | 61.319 | 66.667 | 0.00 | 0.00 | 38.44 | 4.51 |
1105 | 1156 | 1.226603 | GACGACGATGAGTTCCCCG | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 5.73 |
1107 | 1158 | 2.577059 | GACGATGAGTTCCCCGCA | 59.423 | 61.111 | 0.00 | 0.00 | 0.00 | 5.69 |
1127 | 1178 | 1.370609 | TACGGAGAGTTCTCGCTGAG | 58.629 | 55.000 | 16.73 | 6.19 | 43.76 | 3.35 |
1128 | 1179 | 1.309499 | ACGGAGAGTTCTCGCTGAGG | 61.309 | 60.000 | 16.73 | 2.56 | 43.76 | 3.86 |
1129 | 1180 | 1.140804 | GGAGAGTTCTCGCTGAGGC | 59.859 | 63.158 | 3.24 | 0.00 | 43.76 | 4.70 |
1130 | 1181 | 1.319614 | GGAGAGTTCTCGCTGAGGCT | 61.320 | 60.000 | 3.24 | 0.00 | 43.76 | 4.58 |
1131 | 1182 | 0.179140 | GAGAGTTCTCGCTGAGGCTG | 60.179 | 60.000 | 0.00 | 0.00 | 36.09 | 4.85 |
1132 | 1183 | 0.610509 | AGAGTTCTCGCTGAGGCTGA | 60.611 | 55.000 | 0.00 | 0.00 | 36.09 | 4.26 |
1197 | 1248 | 4.115199 | CCTTCCTCCCCCGCCTTG | 62.115 | 72.222 | 0.00 | 0.00 | 0.00 | 3.61 |
1342 | 1393 | 1.975407 | CCTTTGGCCTCCAGTGCTG | 60.975 | 63.158 | 3.32 | 0.00 | 33.81 | 4.41 |
2287 | 2351 | 5.948992 | AACTGGTGAGCAGTCTTAATTTC | 57.051 | 39.130 | 18.37 | 0.00 | 31.67 | 2.17 |
2297 | 2361 | 7.283127 | TGAGCAGTCTTAATTTCTTTCAACACT | 59.717 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
2337 | 2409 | 2.237393 | TGCATTGGTTTCCTTTGTGC | 57.763 | 45.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2350 | 2424 | 9.946165 | GGTTTCCTTTGTGCTGTATTAATATAC | 57.054 | 33.333 | 0.00 | 0.00 | 37.68 | 1.47 |
2354 | 2428 | 9.542462 | TCCTTTGTGCTGTATTAATATACTGTC | 57.458 | 33.333 | 0.00 | 0.00 | 38.04 | 3.51 |
2357 | 2431 | 7.046292 | TGTGCTGTATTAATATACTGTCGGT | 57.954 | 36.000 | 0.00 | 0.00 | 38.04 | 4.69 |
2372 | 2447 | 3.752665 | TGTCGGTTGGGTTAAAAGCATA | 58.247 | 40.909 | 0.00 | 0.00 | 0.00 | 3.14 |
2544 | 2621 | 6.152831 | AGGGGCAACAAGAAATTAGATTACAC | 59.847 | 38.462 | 0.00 | 0.00 | 39.74 | 2.90 |
2594 | 2672 | 7.647827 | TCCCTCCATTTCAAAATATAAGGTGA | 58.352 | 34.615 | 8.17 | 0.00 | 0.00 | 4.02 |
2741 | 3002 | 9.716531 | AATGATACTGATGTGGTAATGATACTG | 57.283 | 33.333 | 0.00 | 0.00 | 32.36 | 2.74 |
2742 | 3003 | 8.477419 | TGATACTGATGTGGTAATGATACTGA | 57.523 | 34.615 | 0.00 | 0.00 | 32.36 | 3.41 |
2743 | 3004 | 8.923270 | TGATACTGATGTGGTAATGATACTGAA | 58.077 | 33.333 | 0.00 | 0.00 | 32.36 | 3.02 |
2745 | 3006 | 6.586344 | ACTGATGTGGTAATGATACTGAAGG | 58.414 | 40.000 | 0.00 | 0.00 | 32.36 | 3.46 |
2746 | 3007 | 5.928976 | TGATGTGGTAATGATACTGAAGGG | 58.071 | 41.667 | 0.00 | 0.00 | 32.36 | 3.95 |
2747 | 3008 | 4.771114 | TGTGGTAATGATACTGAAGGGG | 57.229 | 45.455 | 0.00 | 0.00 | 32.36 | 4.79 |
2748 | 3009 | 4.367166 | TGTGGTAATGATACTGAAGGGGA | 58.633 | 43.478 | 0.00 | 0.00 | 32.36 | 4.81 |
2750 | 3011 | 3.391296 | TGGTAATGATACTGAAGGGGAGC | 59.609 | 47.826 | 0.00 | 0.00 | 32.36 | 4.70 |
2751 | 3012 | 3.244596 | GGTAATGATACTGAAGGGGAGCC | 60.245 | 52.174 | 0.00 | 0.00 | 32.36 | 4.70 |
2754 | 3015 | 1.839994 | TGATACTGAAGGGGAGCCTTG | 59.160 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
2755 | 3016 | 1.141858 | GATACTGAAGGGGAGCCTTGG | 59.858 | 57.143 | 0.00 | 0.00 | 0.00 | 3.61 |
2756 | 3017 | 1.562672 | TACTGAAGGGGAGCCTTGGC | 61.563 | 60.000 | 2.97 | 2.97 | 0.00 | 4.52 |
2757 | 3018 | 3.984193 | CTGAAGGGGAGCCTTGGCG | 62.984 | 68.421 | 5.95 | 0.00 | 0.00 | 5.69 |
2760 | 3021 | 2.595009 | GAAGGGGAGCCTTGGCGTAG | 62.595 | 65.000 | 5.95 | 0.00 | 0.00 | 3.51 |
2761 | 3022 | 3.400054 | GGGGAGCCTTGGCGTAGT | 61.400 | 66.667 | 5.95 | 0.00 | 0.00 | 2.73 |
2762 | 3023 | 2.125106 | GGGAGCCTTGGCGTAGTG | 60.125 | 66.667 | 5.95 | 0.00 | 0.00 | 2.74 |
2763 | 3024 | 2.125106 | GGAGCCTTGGCGTAGTGG | 60.125 | 66.667 | 5.95 | 0.00 | 0.00 | 4.00 |
2765 | 3026 | 1.610554 | GGAGCCTTGGCGTAGTGGTA | 61.611 | 60.000 | 5.95 | 0.00 | 0.00 | 3.25 |
2766 | 3027 | 0.248289 | GAGCCTTGGCGTAGTGGTAA | 59.752 | 55.000 | 5.95 | 0.00 | 0.00 | 2.85 |
2767 | 3028 | 0.688487 | AGCCTTGGCGTAGTGGTAAA | 59.312 | 50.000 | 5.95 | 0.00 | 0.00 | 2.01 |
2769 | 3030 | 1.084289 | CCTTGGCGTAGTGGTAAAGC | 58.916 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2770 | 3031 | 1.338769 | CCTTGGCGTAGTGGTAAAGCT | 60.339 | 52.381 | 0.00 | 0.00 | 0.00 | 3.74 |
2771 | 3032 | 1.732259 | CTTGGCGTAGTGGTAAAGCTG | 59.268 | 52.381 | 0.00 | 0.00 | 0.00 | 4.24 |
2772 | 3033 | 0.672401 | TGGCGTAGTGGTAAAGCTGC | 60.672 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
2773 | 3034 | 1.366854 | GGCGTAGTGGTAAAGCTGCC | 61.367 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2774 | 3035 | 1.693083 | GCGTAGTGGTAAAGCTGCCG | 61.693 | 60.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2776 | 3037 | 1.356938 | GTAGTGGTAAAGCTGCCGTC | 58.643 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2777 | 3038 | 1.067071 | GTAGTGGTAAAGCTGCCGTCT | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
2778 | 3039 | 0.396811 | AGTGGTAAAGCTGCCGTCTT | 59.603 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2780 | 3041 | 0.107831 | TGGTAAAGCTGCCGTCTTGT | 59.892 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2781 | 3042 | 0.517316 | GGTAAAGCTGCCGTCTTGTG | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2782 | 3043 | 1.508632 | GTAAAGCTGCCGTCTTGTGA | 58.491 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2783 | 3044 | 1.194772 | GTAAAGCTGCCGTCTTGTGAC | 59.805 | 52.381 | 0.00 | 0.00 | 39.70 | 3.67 |
2784 | 3045 | 0.179045 | AAAGCTGCCGTCTTGTGACT | 60.179 | 50.000 | 0.00 | 0.00 | 40.86 | 3.41 |
2785 | 3046 | 0.679505 | AAGCTGCCGTCTTGTGACTA | 59.320 | 50.000 | 0.00 | 0.00 | 40.86 | 2.59 |
2786 | 3047 | 0.244994 | AGCTGCCGTCTTGTGACTAG | 59.755 | 55.000 | 0.00 | 0.00 | 40.86 | 2.57 |
2787 | 3048 | 0.737715 | GCTGCCGTCTTGTGACTAGG | 60.738 | 60.000 | 0.00 | 0.00 | 40.86 | 3.02 |
2790 | 3051 | 0.173708 | GCCGTCTTGTGACTAGGAGG | 59.826 | 60.000 | 0.00 | 0.00 | 40.86 | 4.30 |
2791 | 3052 | 1.546961 | CCGTCTTGTGACTAGGAGGT | 58.453 | 55.000 | 0.00 | 0.00 | 40.86 | 3.85 |
2792 | 3053 | 1.473278 | CCGTCTTGTGACTAGGAGGTC | 59.527 | 57.143 | 0.00 | 0.00 | 40.86 | 3.85 |
2793 | 3054 | 2.160205 | CGTCTTGTGACTAGGAGGTCA | 58.840 | 52.381 | 0.00 | 0.00 | 42.96 | 4.02 |
2794 | 3055 | 2.755655 | CGTCTTGTGACTAGGAGGTCAT | 59.244 | 50.000 | 0.00 | 0.00 | 46.04 | 3.06 |
2795 | 3056 | 3.428180 | CGTCTTGTGACTAGGAGGTCATG | 60.428 | 52.174 | 0.00 | 0.00 | 46.04 | 3.07 |
2796 | 3057 | 3.099905 | TCTTGTGACTAGGAGGTCATGG | 58.900 | 50.000 | 0.00 | 0.00 | 46.04 | 3.66 |
2797 | 3058 | 1.866015 | TGTGACTAGGAGGTCATGGG | 58.134 | 55.000 | 0.00 | 0.00 | 46.04 | 4.00 |
2798 | 3059 | 1.078823 | TGTGACTAGGAGGTCATGGGT | 59.921 | 52.381 | 0.00 | 0.00 | 46.04 | 4.51 |
2799 | 3060 | 2.188817 | GTGACTAGGAGGTCATGGGTT | 58.811 | 52.381 | 0.00 | 0.00 | 46.04 | 4.11 |
2800 | 3061 | 2.168728 | GTGACTAGGAGGTCATGGGTTC | 59.831 | 54.545 | 0.00 | 0.00 | 46.04 | 3.62 |
2801 | 3062 | 2.225522 | TGACTAGGAGGTCATGGGTTCA | 60.226 | 50.000 | 0.00 | 0.00 | 40.72 | 3.18 |
2802 | 3063 | 2.838202 | GACTAGGAGGTCATGGGTTCAA | 59.162 | 50.000 | 0.00 | 0.00 | 36.35 | 2.69 |
2803 | 3064 | 2.840651 | ACTAGGAGGTCATGGGTTCAAG | 59.159 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2804 | 3065 | 1.747444 | AGGAGGTCATGGGTTCAAGT | 58.253 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2805 | 3066 | 1.630878 | AGGAGGTCATGGGTTCAAGTC | 59.369 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
2806 | 3067 | 1.630878 | GGAGGTCATGGGTTCAAGTCT | 59.369 | 52.381 | 0.00 | 0.00 | 0.00 | 3.24 |
2807 | 3068 | 2.040412 | GGAGGTCATGGGTTCAAGTCTT | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2808 | 3069 | 3.077359 | GAGGTCATGGGTTCAAGTCTTG | 58.923 | 50.000 | 6.21 | 6.21 | 0.00 | 3.02 |
2809 | 3070 | 2.162681 | GGTCATGGGTTCAAGTCTTGG | 58.837 | 52.381 | 12.66 | 0.00 | 0.00 | 3.61 |
2810 | 3071 | 2.224769 | GGTCATGGGTTCAAGTCTTGGA | 60.225 | 50.000 | 12.66 | 0.30 | 0.00 | 3.53 |
2811 | 3072 | 3.486383 | GTCATGGGTTCAAGTCTTGGAA | 58.514 | 45.455 | 12.66 | 3.49 | 0.00 | 3.53 |
2812 | 3073 | 3.888930 | GTCATGGGTTCAAGTCTTGGAAA | 59.111 | 43.478 | 12.66 | 0.00 | 0.00 | 3.13 |
2814 | 3075 | 2.306847 | TGGGTTCAAGTCTTGGAAAGC | 58.693 | 47.619 | 12.66 | 9.64 | 45.70 | 3.51 |
2815 | 3076 | 2.091885 | TGGGTTCAAGTCTTGGAAAGCT | 60.092 | 45.455 | 12.66 | 0.00 | 45.70 | 3.74 |
2816 | 3077 | 2.294512 | GGGTTCAAGTCTTGGAAAGCTG | 59.705 | 50.000 | 12.66 | 0.00 | 45.70 | 4.24 |
2817 | 3078 | 2.294512 | GGTTCAAGTCTTGGAAAGCTGG | 59.705 | 50.000 | 12.66 | 0.00 | 45.70 | 4.85 |
2818 | 3079 | 2.952310 | GTTCAAGTCTTGGAAAGCTGGT | 59.048 | 45.455 | 12.66 | 0.00 | 45.70 | 4.00 |
2838 | 3099 | 8.422566 | AGCTGGTAGAAATTAGTACACCTTATC | 58.577 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
2860 | 3121 | 6.976934 | TCTTTATTTTGGAATAGATGGGGC | 57.023 | 37.500 | 0.00 | 0.00 | 0.00 | 5.80 |
2873 | 3134 | 8.854117 | GGAATAGATGGGGCATTCATTAATATC | 58.146 | 37.037 | 0.00 | 0.00 | 31.61 | 1.63 |
2921 | 3183 | 4.511527 | GTGAATCAGACATGACTGGTGAT | 58.488 | 43.478 | 22.15 | 8.58 | 38.57 | 3.06 |
2923 | 3185 | 2.947448 | TCAGACATGACTGGTGATCG | 57.053 | 50.000 | 22.15 | 0.00 | 38.31 | 3.69 |
2934 | 3196 | 2.104111 | ACTGGTGATCGGTTCTTTCACA | 59.896 | 45.455 | 4.85 | 0.00 | 41.17 | 3.58 |
2935 | 3197 | 2.480419 | CTGGTGATCGGTTCTTTCACAC | 59.520 | 50.000 | 4.85 | 0.00 | 41.17 | 3.82 |
2943 | 3205 | 3.385433 | TCGGTTCTTTCACACTCACCTAA | 59.615 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
3125 | 3431 | 9.942850 | TTTGAGTGATTGAGTCTAATGACATTA | 57.057 | 29.630 | 7.65 | 7.65 | 45.20 | 1.90 |
3165 | 3517 | 6.288294 | TGTAGCATTGTGTAATACTCCCATC | 58.712 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3166 | 3518 | 5.372343 | AGCATTGTGTAATACTCCCATCA | 57.628 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
3385 | 3853 | 0.179181 | CATGTTGCGCAAGTAGGCAG | 60.179 | 55.000 | 25.78 | 7.75 | 40.75 | 4.85 |
3423 | 3891 | 3.586470 | AATATTCCCATTGTGCCGGTA | 57.414 | 42.857 | 1.90 | 0.00 | 0.00 | 4.02 |
3784 | 4267 | 3.394674 | TGGTTCGCTTTGACATGTCTA | 57.605 | 42.857 | 25.55 | 16.43 | 0.00 | 2.59 |
3789 | 4272 | 5.163982 | GGTTCGCTTTGACATGTCTAAGTAC | 60.164 | 44.000 | 34.69 | 29.35 | 41.96 | 2.73 |
3853 | 4354 | 4.209288 | CGAGGTTTGTGTAGTGTTCTCTTG | 59.791 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
3985 | 4524 | 1.078426 | GAGGCGCCCATACAGTGTT | 60.078 | 57.895 | 26.15 | 0.00 | 0.00 | 3.32 |
4021 | 4560 | 0.614697 | TGGAGAAGGCAGATCCGTCA | 60.615 | 55.000 | 0.00 | 0.00 | 44.52 | 4.35 |
4182 | 4721 | 1.401761 | ACAACAATGGAAGCAGCACA | 58.598 | 45.000 | 0.00 | 0.00 | 0.00 | 4.57 |
4411 | 4973 | 1.003233 | GCCAGTGTAGCTAACAAGGGT | 59.997 | 52.381 | 0.00 | 0.00 | 40.63 | 4.34 |
4656 | 5247 | 1.144936 | GGGAAGTCGATGAGGGCAG | 59.855 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
4840 | 5431 | 3.780850 | AGGTAGTGGGCTTTTAGCATACT | 59.219 | 43.478 | 10.46 | 10.46 | 44.75 | 2.12 |
4845 | 5436 | 5.566469 | AGTGGGCTTTTAGCATACTAACAA | 58.434 | 37.500 | 0.67 | 0.00 | 44.75 | 2.83 |
4864 | 5455 | 3.250744 | CAAATGGCAAGTGAATGAGCTG | 58.749 | 45.455 | 0.00 | 0.00 | 0.00 | 4.24 |
4881 | 5472 | 3.702045 | GAGCTGGTCTAATCAGTGGTAGT | 59.298 | 47.826 | 0.00 | 0.00 | 34.89 | 2.73 |
4886 | 5477 | 4.081642 | TGGTCTAATCAGTGGTAGTGCTTC | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
4957 | 5548 | 8.150945 | ACATCTAGATAACAATATGTGTGGTCC | 58.849 | 37.037 | 4.54 | 0.00 | 40.60 | 4.46 |
4965 | 5556 | 4.280677 | ACAATATGTGTGGTCCAGGTTTTG | 59.719 | 41.667 | 0.00 | 0.00 | 39.72 | 2.44 |
4973 | 5564 | 2.299582 | TGGTCCAGGTTTTGCATCATTG | 59.700 | 45.455 | 0.00 | 0.00 | 0.00 | 2.82 |
5067 | 5658 | 6.968131 | TTTGTGTCATGAGATAGTTACAGC | 57.032 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
5072 | 5663 | 6.865726 | GTGTCATGAGATAGTTACAGCCTATG | 59.134 | 42.308 | 0.00 | 0.00 | 0.00 | 2.23 |
5074 | 5665 | 6.865726 | GTCATGAGATAGTTACAGCCTATGTG | 59.134 | 42.308 | 0.00 | 0.00 | 43.80 | 3.21 |
5082 | 5673 | 1.882912 | ACAGCCTATGTGTGTGTGTG | 58.117 | 50.000 | 0.00 | 0.00 | 41.91 | 3.82 |
5083 | 5674 | 1.140852 | ACAGCCTATGTGTGTGTGTGT | 59.859 | 47.619 | 0.00 | 0.00 | 41.91 | 3.72 |
5084 | 5675 | 1.532437 | CAGCCTATGTGTGTGTGTGTG | 59.468 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
5085 | 5676 | 1.140852 | AGCCTATGTGTGTGTGTGTGT | 59.859 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
5086 | 5677 | 1.264020 | GCCTATGTGTGTGTGTGTGTG | 59.736 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
5087 | 5678 | 2.560504 | CCTATGTGTGTGTGTGTGTGT | 58.439 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
5094 | 5685 | 1.663643 | GTGTGTGTGTGTGTGGTACTG | 59.336 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
5099 | 5690 | 1.134640 | TGTGTGTGTGGTACTGTGGTC | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
5101 | 5692 | 1.834896 | TGTGTGTGGTACTGTGGTCTT | 59.165 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
5107 | 5698 | 4.689345 | GTGTGGTACTGTGGTCTTTATGTC | 59.311 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
5127 | 5720 | 5.474825 | TGTCATTTACATGTTACTCGAGCA | 58.525 | 37.500 | 13.61 | 2.58 | 31.43 | 4.26 |
5170 | 5763 | 3.117701 | TCAATGGTGTGAGAGGTGGAAAA | 60.118 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
5174 | 5767 | 3.650942 | TGGTGTGAGAGGTGGAAAATAGT | 59.349 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
5222 | 5815 | 3.634504 | TGGCTTGATGGCATAGATTTGT | 58.365 | 40.909 | 0.00 | 0.00 | 46.76 | 2.83 |
5228 | 5821 | 7.082602 | GCTTGATGGCATAGATTTGTATGAAG | 58.917 | 38.462 | 0.00 | 0.00 | 32.88 | 3.02 |
5276 | 5871 | 5.533528 | GGCCCTTCACTCAAAGTAAGTTTTA | 59.466 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
5286 | 5881 | 9.185680 | ACTCAAAGTAAGTTTTATTTCCACACT | 57.814 | 29.630 | 0.00 | 0.00 | 0.00 | 3.55 |
5300 | 5895 | 6.419484 | TTTCCACACTCTCTAGTTCAATCA | 57.581 | 37.500 | 0.00 | 0.00 | 31.97 | 2.57 |
5302 | 5897 | 4.832823 | TCCACACTCTCTAGTTCAATCACA | 59.167 | 41.667 | 0.00 | 0.00 | 31.97 | 3.58 |
5322 | 5917 | 3.181454 | ACATCTCCCCTACATAAAAGCGG | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 5.52 |
5323 | 5918 | 1.140252 | TCTCCCCTACATAAAAGCGGC | 59.860 | 52.381 | 0.00 | 0.00 | 0.00 | 6.53 |
5324 | 5919 | 0.913205 | TCCCCTACATAAAAGCGGCA | 59.087 | 50.000 | 1.45 | 0.00 | 0.00 | 5.69 |
5375 | 5979 | 1.516110 | ATGGAGGGGTTGATCTCTGG | 58.484 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5386 | 5990 | 2.832838 | TGATCTCTGGTGGCTCCTAAA | 58.167 | 47.619 | 7.19 | 0.00 | 37.07 | 1.85 |
5393 | 5997 | 1.141254 | TGGTGGCTCCTAAACGTTTCA | 59.859 | 47.619 | 18.42 | 5.22 | 37.07 | 2.69 |
5423 | 6027 | 7.388776 | TCAAAGATGTTGTTTGAGGTAGATCAG | 59.611 | 37.037 | 0.00 | 0.00 | 38.66 | 2.90 |
5430 | 6034 | 4.027437 | GTTTGAGGTAGATCAGTCCCTCT | 58.973 | 47.826 | 16.21 | 0.00 | 43.21 | 3.69 |
5437 | 6041 | 2.387757 | AGATCAGTCCCTCTTCTGCTC | 58.612 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
5448 | 6052 | 3.055963 | CCTCTTCTGCTCTGATGTTGTCT | 60.056 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
5449 | 6053 | 3.922910 | TCTTCTGCTCTGATGTTGTCTG | 58.077 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
5450 | 6054 | 2.090400 | TCTGCTCTGATGTTGTCTGC | 57.910 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
5451 | 6055 | 1.622312 | TCTGCTCTGATGTTGTCTGCT | 59.378 | 47.619 | 0.00 | 0.00 | 0.00 | 4.24 |
5452 | 6056 | 2.827921 | TCTGCTCTGATGTTGTCTGCTA | 59.172 | 45.455 | 0.00 | 0.00 | 0.00 | 3.49 |
5453 | 6057 | 3.450096 | TCTGCTCTGATGTTGTCTGCTAT | 59.550 | 43.478 | 0.00 | 0.00 | 0.00 | 2.97 |
5454 | 6058 | 4.081254 | TCTGCTCTGATGTTGTCTGCTATT | 60.081 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
5455 | 6059 | 4.582869 | TGCTCTGATGTTGTCTGCTATTT | 58.417 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
5456 | 6060 | 4.633126 | TGCTCTGATGTTGTCTGCTATTTC | 59.367 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
5457 | 6061 | 4.874966 | GCTCTGATGTTGTCTGCTATTTCT | 59.125 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
5458 | 6062 | 5.353678 | GCTCTGATGTTGTCTGCTATTTCTT | 59.646 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5459 | 6063 | 6.675002 | GCTCTGATGTTGTCTGCTATTTCTTG | 60.675 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
5460 | 6064 | 6.466812 | TCTGATGTTGTCTGCTATTTCTTGA | 58.533 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5461 | 6065 | 6.592994 | TCTGATGTTGTCTGCTATTTCTTGAG | 59.407 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
5462 | 6066 | 5.122869 | TGATGTTGTCTGCTATTTCTTGAGC | 59.877 | 40.000 | 0.00 | 0.00 | 39.25 | 4.26 |
5463 | 6067 | 4.645535 | TGTTGTCTGCTATTTCTTGAGCT | 58.354 | 39.130 | 0.00 | 0.00 | 39.54 | 4.09 |
5464 | 6068 | 5.065914 | TGTTGTCTGCTATTTCTTGAGCTT | 58.934 | 37.500 | 0.00 | 0.00 | 39.54 | 3.74 |
5465 | 6069 | 5.049198 | TGTTGTCTGCTATTTCTTGAGCTTG | 60.049 | 40.000 | 0.00 | 0.00 | 39.54 | 4.01 |
5466 | 6070 | 3.438087 | TGTCTGCTATTTCTTGAGCTTGC | 59.562 | 43.478 | 0.00 | 0.00 | 39.54 | 4.01 |
5467 | 6071 | 3.438087 | GTCTGCTATTTCTTGAGCTTGCA | 59.562 | 43.478 | 0.00 | 0.00 | 39.54 | 4.08 |
5468 | 6072 | 3.438087 | TCTGCTATTTCTTGAGCTTGCAC | 59.562 | 43.478 | 0.00 | 0.00 | 39.54 | 4.57 |
5469 | 6073 | 3.415212 | TGCTATTTCTTGAGCTTGCACT | 58.585 | 40.909 | 0.00 | 0.00 | 39.54 | 4.40 |
5470 | 6074 | 3.189910 | TGCTATTTCTTGAGCTTGCACTG | 59.810 | 43.478 | 0.00 | 0.00 | 39.54 | 3.66 |
5471 | 6075 | 3.427233 | GCTATTTCTTGAGCTTGCACTGG | 60.427 | 47.826 | 0.00 | 0.00 | 35.73 | 4.00 |
5472 | 6076 | 2.057137 | TTTCTTGAGCTTGCACTGGT | 57.943 | 45.000 | 0.00 | 0.00 | 0.00 | 4.00 |
5473 | 6077 | 2.057137 | TTCTTGAGCTTGCACTGGTT | 57.943 | 45.000 | 0.00 | 0.00 | 0.00 | 3.67 |
5474 | 6078 | 2.057137 | TCTTGAGCTTGCACTGGTTT | 57.943 | 45.000 | 0.00 | 0.00 | 0.00 | 3.27 |
5475 | 6079 | 2.378038 | TCTTGAGCTTGCACTGGTTTT | 58.622 | 42.857 | 0.00 | 0.00 | 0.00 | 2.43 |
5476 | 6080 | 2.760092 | TCTTGAGCTTGCACTGGTTTTT | 59.240 | 40.909 | 0.00 | 0.00 | 0.00 | 1.94 |
5477 | 6081 | 2.869233 | TGAGCTTGCACTGGTTTTTC | 57.131 | 45.000 | 0.00 | 0.00 | 0.00 | 2.29 |
5478 | 6082 | 1.408702 | TGAGCTTGCACTGGTTTTTCC | 59.591 | 47.619 | 0.00 | 0.00 | 0.00 | 3.13 |
5479 | 6083 | 0.752658 | AGCTTGCACTGGTTTTTCCC | 59.247 | 50.000 | 0.00 | 0.00 | 34.77 | 3.97 |
5480 | 6084 | 0.752658 | GCTTGCACTGGTTTTTCCCT | 59.247 | 50.000 | 0.00 | 0.00 | 34.77 | 4.20 |
5481 | 6085 | 1.138859 | GCTTGCACTGGTTTTTCCCTT | 59.861 | 47.619 | 0.00 | 0.00 | 34.77 | 3.95 |
5482 | 6086 | 2.825205 | CTTGCACTGGTTTTTCCCTTG | 58.175 | 47.619 | 0.00 | 0.00 | 34.77 | 3.61 |
5483 | 6087 | 0.463620 | TGCACTGGTTTTTCCCTTGC | 59.536 | 50.000 | 0.00 | 0.00 | 40.97 | 4.01 |
5484 | 6088 | 0.463620 | GCACTGGTTTTTCCCTTGCA | 59.536 | 50.000 | 0.00 | 0.00 | 40.56 | 4.08 |
5485 | 6089 | 1.538849 | GCACTGGTTTTTCCCTTGCAG | 60.539 | 52.381 | 0.00 | 0.00 | 40.56 | 4.41 |
5486 | 6090 | 2.031120 | CACTGGTTTTTCCCTTGCAGA | 58.969 | 47.619 | 0.00 | 0.00 | 34.77 | 4.26 |
5487 | 6091 | 2.035066 | CACTGGTTTTTCCCTTGCAGAG | 59.965 | 50.000 | 0.00 | 0.00 | 34.77 | 3.35 |
5488 | 6092 | 2.091885 | ACTGGTTTTTCCCTTGCAGAGA | 60.092 | 45.455 | 0.00 | 0.00 | 34.77 | 3.10 |
5489 | 6093 | 3.160269 | CTGGTTTTTCCCTTGCAGAGAT | 58.840 | 45.455 | 0.00 | 0.00 | 34.77 | 2.75 |
5490 | 6094 | 4.202567 | ACTGGTTTTTCCCTTGCAGAGATA | 60.203 | 41.667 | 0.00 | 0.00 | 34.77 | 1.98 |
5491 | 6095 | 4.735369 | TGGTTTTTCCCTTGCAGAGATAA | 58.265 | 39.130 | 0.00 | 0.00 | 34.77 | 1.75 |
5492 | 6096 | 4.766891 | TGGTTTTTCCCTTGCAGAGATAAG | 59.233 | 41.667 | 0.00 | 0.00 | 34.77 | 1.73 |
5493 | 6097 | 4.767409 | GGTTTTTCCCTTGCAGAGATAAGT | 59.233 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
5494 | 6098 | 5.944007 | GGTTTTTCCCTTGCAGAGATAAGTA | 59.056 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5495 | 6099 | 6.603599 | GGTTTTTCCCTTGCAGAGATAAGTAT | 59.396 | 38.462 | 0.00 | 0.00 | 0.00 | 2.12 |
5496 | 6100 | 7.122799 | GGTTTTTCCCTTGCAGAGATAAGTATT | 59.877 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
5497 | 6101 | 8.523658 | GTTTTTCCCTTGCAGAGATAAGTATTT | 58.476 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
5498 | 6102 | 7.865706 | TTTCCCTTGCAGAGATAAGTATTTC | 57.134 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
5499 | 6103 | 5.930135 | TCCCTTGCAGAGATAAGTATTTCC | 58.070 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
5500 | 6104 | 5.066593 | CCCTTGCAGAGATAAGTATTTCCC | 58.933 | 45.833 | 0.00 | 0.00 | 0.00 | 3.97 |
5501 | 6105 | 5.163152 | CCCTTGCAGAGATAAGTATTTCCCT | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5502 | 6106 | 5.994668 | CCTTGCAGAGATAAGTATTTCCCTC | 59.005 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5503 | 6107 | 6.408548 | CCTTGCAGAGATAAGTATTTCCCTCA | 60.409 | 42.308 | 0.00 | 0.00 | 0.00 | 3.86 |
5504 | 6108 | 6.166984 | TGCAGAGATAAGTATTTCCCTCAG | 57.833 | 41.667 | 0.00 | 0.00 | 0.00 | 3.35 |
5505 | 6109 | 4.994217 | GCAGAGATAAGTATTTCCCTCAGC | 59.006 | 45.833 | 0.00 | 0.00 | 0.00 | 4.26 |
5506 | 6110 | 5.221621 | GCAGAGATAAGTATTTCCCTCAGCT | 60.222 | 44.000 | 0.00 | 0.00 | 32.72 | 4.24 |
5507 | 6111 | 6.687647 | GCAGAGATAAGTATTTCCCTCAGCTT | 60.688 | 42.308 | 0.00 | 0.00 | 32.72 | 3.74 |
5508 | 6112 | 7.472100 | GCAGAGATAAGTATTTCCCTCAGCTTA | 60.472 | 40.741 | 0.00 | 0.00 | 32.72 | 3.09 |
5509 | 6113 | 8.424918 | CAGAGATAAGTATTTCCCTCAGCTTAA | 58.575 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
5510 | 6114 | 8.646900 | AGAGATAAGTATTTCCCTCAGCTTAAG | 58.353 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
5511 | 6115 | 8.554490 | AGATAAGTATTTCCCTCAGCTTAAGA | 57.446 | 34.615 | 6.67 | 0.00 | 0.00 | 2.10 |
5512 | 6116 | 8.993424 | AGATAAGTATTTCCCTCAGCTTAAGAA | 58.007 | 33.333 | 6.67 | 0.00 | 0.00 | 2.52 |
5513 | 6117 | 8.966069 | ATAAGTATTTCCCTCAGCTTAAGAAC | 57.034 | 34.615 | 6.67 | 0.00 | 0.00 | 3.01 |
5514 | 6118 | 6.628644 | AGTATTTCCCTCAGCTTAAGAACT | 57.371 | 37.500 | 6.67 | 0.00 | 0.00 | 3.01 |
5515 | 6119 | 7.735326 | AGTATTTCCCTCAGCTTAAGAACTA | 57.265 | 36.000 | 6.67 | 0.00 | 0.00 | 2.24 |
5516 | 6120 | 8.147244 | AGTATTTCCCTCAGCTTAAGAACTAA | 57.853 | 34.615 | 6.67 | 0.00 | 0.00 | 2.24 |
5517 | 6121 | 8.261522 | AGTATTTCCCTCAGCTTAAGAACTAAG | 58.738 | 37.037 | 6.67 | 0.00 | 40.17 | 2.18 |
5518 | 6122 | 5.422214 | TTCCCTCAGCTTAAGAACTAAGG | 57.578 | 43.478 | 6.67 | 0.00 | 37.98 | 2.69 |
5519 | 6123 | 4.426704 | TCCCTCAGCTTAAGAACTAAGGT | 58.573 | 43.478 | 6.67 | 0.00 | 46.89 | 3.50 |
5520 | 6124 | 5.586877 | TCCCTCAGCTTAAGAACTAAGGTA | 58.413 | 41.667 | 6.67 | 0.00 | 44.69 | 3.08 |
5521 | 6125 | 6.203072 | TCCCTCAGCTTAAGAACTAAGGTAT | 58.797 | 40.000 | 6.67 | 0.00 | 44.69 | 2.73 |
5522 | 6126 | 6.324254 | TCCCTCAGCTTAAGAACTAAGGTATC | 59.676 | 42.308 | 6.67 | 0.00 | 44.69 | 2.24 |
5523 | 6127 | 6.098409 | CCCTCAGCTTAAGAACTAAGGTATCA | 59.902 | 42.308 | 6.67 | 0.00 | 44.69 | 2.15 |
5524 | 6128 | 7.364762 | CCCTCAGCTTAAGAACTAAGGTATCAA | 60.365 | 40.741 | 6.67 | 0.00 | 44.69 | 2.57 |
5525 | 6129 | 8.207545 | CCTCAGCTTAAGAACTAAGGTATCAAT | 58.792 | 37.037 | 6.67 | 0.00 | 44.69 | 2.57 |
5526 | 6130 | 9.255304 | CTCAGCTTAAGAACTAAGGTATCAATC | 57.745 | 37.037 | 6.67 | 0.00 | 44.69 | 2.67 |
5527 | 6131 | 8.204836 | TCAGCTTAAGAACTAAGGTATCAATCC | 58.795 | 37.037 | 6.67 | 0.00 | 44.69 | 3.01 |
5528 | 6132 | 7.987458 | CAGCTTAAGAACTAAGGTATCAATCCA | 59.013 | 37.037 | 6.67 | 0.00 | 44.69 | 3.41 |
5529 | 6133 | 8.207545 | AGCTTAAGAACTAAGGTATCAATCCAG | 58.792 | 37.037 | 6.67 | 0.00 | 44.66 | 3.86 |
5530 | 6134 | 7.988028 | GCTTAAGAACTAAGGTATCAATCCAGT | 59.012 | 37.037 | 6.67 | 0.00 | 37.98 | 4.00 |
5533 | 6137 | 7.604657 | AGAACTAAGGTATCAATCCAGTAGG | 57.395 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5543 | 6147 | 3.045518 | TCCAGTAGGAGACAACGCA | 57.954 | 52.632 | 0.00 | 0.00 | 39.61 | 5.24 |
5544 | 6148 | 0.601558 | TCCAGTAGGAGACAACGCAC | 59.398 | 55.000 | 0.00 | 0.00 | 39.61 | 5.34 |
5545 | 6149 | 0.317160 | CCAGTAGGAGACAACGCACA | 59.683 | 55.000 | 0.00 | 0.00 | 36.89 | 4.57 |
5546 | 6150 | 1.270094 | CCAGTAGGAGACAACGCACAA | 60.270 | 52.381 | 0.00 | 0.00 | 36.89 | 3.33 |
5547 | 6151 | 2.479837 | CAGTAGGAGACAACGCACAAA | 58.520 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
5548 | 6152 | 3.067106 | CAGTAGGAGACAACGCACAAAT | 58.933 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
5549 | 6153 | 3.123621 | CAGTAGGAGACAACGCACAAATC | 59.876 | 47.826 | 0.00 | 0.00 | 0.00 | 2.17 |
5550 | 6154 | 2.254546 | AGGAGACAACGCACAAATCA | 57.745 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5551 | 6155 | 1.873591 | AGGAGACAACGCACAAATCAC | 59.126 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
5552 | 6156 | 1.069227 | GGAGACAACGCACAAATCACC | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
5553 | 6157 | 1.601903 | GAGACAACGCACAAATCACCA | 59.398 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
5554 | 6158 | 2.020720 | AGACAACGCACAAATCACCAA | 58.979 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
5555 | 6159 | 2.622942 | AGACAACGCACAAATCACCAAT | 59.377 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
5556 | 6160 | 3.818210 | AGACAACGCACAAATCACCAATA | 59.182 | 39.130 | 0.00 | 0.00 | 0.00 | 1.90 |
5557 | 6161 | 3.896122 | ACAACGCACAAATCACCAATAC | 58.104 | 40.909 | 0.00 | 0.00 | 0.00 | 1.89 |
5558 | 6162 | 3.241701 | CAACGCACAAATCACCAATACC | 58.758 | 45.455 | 0.00 | 0.00 | 0.00 | 2.73 |
5559 | 6163 | 2.790433 | ACGCACAAATCACCAATACCT | 58.210 | 42.857 | 0.00 | 0.00 | 0.00 | 3.08 |
5560 | 6164 | 2.487762 | ACGCACAAATCACCAATACCTG | 59.512 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
5561 | 6165 | 2.731968 | CGCACAAATCACCAATACCTGC | 60.732 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
5562 | 6166 | 2.230992 | GCACAAATCACCAATACCTGCA | 59.769 | 45.455 | 0.00 | 0.00 | 0.00 | 4.41 |
5563 | 6167 | 3.836949 | CACAAATCACCAATACCTGCAC | 58.163 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
5564 | 6168 | 3.255395 | CACAAATCACCAATACCTGCACA | 59.745 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
5565 | 6169 | 3.894427 | ACAAATCACCAATACCTGCACAA | 59.106 | 39.130 | 0.00 | 0.00 | 0.00 | 3.33 |
5566 | 6170 | 4.343526 | ACAAATCACCAATACCTGCACAAA | 59.656 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
5567 | 6171 | 4.519540 | AATCACCAATACCTGCACAAAC | 57.480 | 40.909 | 0.00 | 0.00 | 0.00 | 2.93 |
5568 | 6172 | 2.937519 | TCACCAATACCTGCACAAACA | 58.062 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
5569 | 6173 | 3.291584 | TCACCAATACCTGCACAAACAA | 58.708 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
5570 | 6174 | 3.894427 | TCACCAATACCTGCACAAACAAT | 59.106 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
5571 | 6175 | 4.022416 | TCACCAATACCTGCACAAACAATC | 60.022 | 41.667 | 0.00 | 0.00 | 0.00 | 2.67 |
5572 | 6176 | 3.894427 | ACCAATACCTGCACAAACAATCA | 59.106 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
5573 | 6177 | 4.343526 | ACCAATACCTGCACAAACAATCAA | 59.656 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
5574 | 6178 | 5.163364 | ACCAATACCTGCACAAACAATCAAA | 60.163 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
5575 | 6179 | 5.177327 | CCAATACCTGCACAAACAATCAAAC | 59.823 | 40.000 | 0.00 | 0.00 | 0.00 | 2.93 |
5576 | 6180 | 3.883830 | ACCTGCACAAACAATCAAACA | 57.116 | 38.095 | 0.00 | 0.00 | 0.00 | 2.83 |
5577 | 6181 | 4.199432 | ACCTGCACAAACAATCAAACAA | 57.801 | 36.364 | 0.00 | 0.00 | 0.00 | 2.83 |
5578 | 6182 | 3.932089 | ACCTGCACAAACAATCAAACAAC | 59.068 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
5579 | 6183 | 4.183101 | CCTGCACAAACAATCAAACAACT | 58.817 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
5580 | 6184 | 4.630940 | CCTGCACAAACAATCAAACAACTT | 59.369 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
5581 | 6185 | 5.446206 | CCTGCACAAACAATCAAACAACTTG | 60.446 | 40.000 | 0.00 | 0.00 | 36.25 | 3.16 |
5582 | 6186 | 4.142945 | TGCACAAACAATCAAACAACTTGC | 60.143 | 37.500 | 0.00 | 0.00 | 34.76 | 4.01 |
5583 | 6187 | 4.142945 | GCACAAACAATCAAACAACTTGCA | 60.143 | 37.500 | 0.00 | 0.00 | 34.76 | 4.08 |
5584 | 6188 | 5.315195 | CACAAACAATCAAACAACTTGCAC | 58.685 | 37.500 | 0.00 | 0.00 | 34.76 | 4.57 |
5585 | 6189 | 4.391523 | ACAAACAATCAAACAACTTGCACC | 59.608 | 37.500 | 0.00 | 0.00 | 34.76 | 5.01 |
5586 | 6190 | 3.177997 | ACAATCAAACAACTTGCACCC | 57.822 | 42.857 | 0.00 | 0.00 | 34.76 | 4.61 |
5587 | 6191 | 2.499289 | ACAATCAAACAACTTGCACCCA | 59.501 | 40.909 | 0.00 | 0.00 | 34.76 | 4.51 |
5588 | 6192 | 3.055530 | ACAATCAAACAACTTGCACCCAA | 60.056 | 39.130 | 0.00 | 0.00 | 34.76 | 4.12 |
5589 | 6193 | 2.663826 | TCAAACAACTTGCACCCAAC | 57.336 | 45.000 | 0.00 | 0.00 | 34.76 | 3.77 |
5590 | 6194 | 1.135257 | TCAAACAACTTGCACCCAACG | 60.135 | 47.619 | 0.00 | 0.00 | 34.76 | 4.10 |
5591 | 6195 | 0.459411 | AAACAACTTGCACCCAACGC | 60.459 | 50.000 | 0.00 | 0.00 | 0.00 | 4.84 |
5592 | 6196 | 2.353376 | CAACTTGCACCCAACGCG | 60.353 | 61.111 | 3.53 | 3.53 | 0.00 | 6.01 |
5593 | 6197 | 2.515057 | AACTTGCACCCAACGCGA | 60.515 | 55.556 | 15.93 | 0.00 | 0.00 | 5.87 |
5594 | 6198 | 1.896660 | AACTTGCACCCAACGCGAT | 60.897 | 52.632 | 15.93 | 0.00 | 0.00 | 4.58 |
5595 | 6199 | 0.604243 | AACTTGCACCCAACGCGATA | 60.604 | 50.000 | 15.93 | 0.00 | 0.00 | 2.92 |
5596 | 6200 | 0.604243 | ACTTGCACCCAACGCGATAA | 60.604 | 50.000 | 15.93 | 0.00 | 0.00 | 1.75 |
5597 | 6201 | 0.519519 | CTTGCACCCAACGCGATAAA | 59.480 | 50.000 | 15.93 | 0.00 | 0.00 | 1.40 |
5598 | 6202 | 0.519519 | TTGCACCCAACGCGATAAAG | 59.480 | 50.000 | 15.93 | 0.00 | 0.00 | 1.85 |
5599 | 6203 | 1.302383 | TGCACCCAACGCGATAAAGG | 61.302 | 55.000 | 15.93 | 8.56 | 0.00 | 3.11 |
5600 | 6204 | 1.988834 | GCACCCAACGCGATAAAGGG | 61.989 | 60.000 | 15.93 | 17.99 | 45.20 | 3.95 |
5601 | 6205 | 4.629779 | CCCAACGCGATAAAGGGT | 57.370 | 55.556 | 15.93 | 0.00 | 39.03 | 4.34 |
5602 | 6206 | 2.862738 | CCCAACGCGATAAAGGGTT | 58.137 | 52.632 | 15.93 | 0.00 | 46.11 | 4.11 |
5606 | 6210 | 2.172851 | AACGCGATAAAGGGTTGACA | 57.827 | 45.000 | 15.93 | 0.00 | 44.01 | 3.58 |
5607 | 6211 | 2.172851 | ACGCGATAAAGGGTTGACAA | 57.827 | 45.000 | 15.93 | 0.00 | 33.28 | 3.18 |
5608 | 6212 | 2.706890 | ACGCGATAAAGGGTTGACAAT | 58.293 | 42.857 | 15.93 | 0.00 | 33.28 | 2.71 |
5609 | 6213 | 2.676342 | ACGCGATAAAGGGTTGACAATC | 59.324 | 45.455 | 15.93 | 0.00 | 33.28 | 2.67 |
5610 | 6214 | 2.031683 | CGCGATAAAGGGTTGACAATCC | 59.968 | 50.000 | 9.67 | 9.67 | 0.00 | 3.01 |
5611 | 6215 | 2.357952 | GCGATAAAGGGTTGACAATCCC | 59.642 | 50.000 | 14.13 | 14.40 | 43.71 | 3.85 |
5617 | 6221 | 1.165270 | GGGTTGACAATCCCTTCACG | 58.835 | 55.000 | 6.16 | 0.00 | 40.48 | 4.35 |
5618 | 6222 | 1.165270 | GGTTGACAATCCCTTCACGG | 58.835 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
5619 | 6223 | 1.544759 | GGTTGACAATCCCTTCACGGT | 60.545 | 52.381 | 0.00 | 0.00 | 0.00 | 4.83 |
5620 | 6224 | 1.804748 | GTTGACAATCCCTTCACGGTC | 59.195 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
5621 | 6225 | 1.052617 | TGACAATCCCTTCACGGTCA | 58.947 | 50.000 | 0.00 | 0.00 | 33.31 | 4.02 |
5622 | 6226 | 1.270625 | TGACAATCCCTTCACGGTCAC | 60.271 | 52.381 | 0.00 | 0.00 | 30.99 | 3.67 |
5623 | 6227 | 1.002087 | GACAATCCCTTCACGGTCACT | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
5624 | 6228 | 1.420138 | ACAATCCCTTCACGGTCACTT | 59.580 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
5625 | 6229 | 1.806542 | CAATCCCTTCACGGTCACTTG | 59.193 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
5626 | 6230 | 0.321653 | ATCCCTTCACGGTCACTTGC | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
5627 | 6231 | 1.227823 | CCCTTCACGGTCACTTGCA | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 4.08 |
5628 | 6232 | 0.817634 | CCCTTCACGGTCACTTGCAA | 60.818 | 55.000 | 0.00 | 0.00 | 0.00 | 4.08 |
5629 | 6233 | 1.021202 | CCTTCACGGTCACTTGCAAA | 58.979 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
5630 | 6234 | 1.403679 | CCTTCACGGTCACTTGCAAAA | 59.596 | 47.619 | 0.00 | 0.00 | 0.00 | 2.44 |
5631 | 6235 | 2.159310 | CCTTCACGGTCACTTGCAAAAA | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
5632 | 6236 | 3.490761 | CCTTCACGGTCACTTGCAAAAAT | 60.491 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
5633 | 6237 | 4.261405 | CCTTCACGGTCACTTGCAAAAATA | 60.261 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
5634 | 6238 | 4.902443 | TCACGGTCACTTGCAAAAATAA | 57.098 | 36.364 | 0.00 | 0.00 | 0.00 | 1.40 |
5635 | 6239 | 4.854399 | TCACGGTCACTTGCAAAAATAAG | 58.146 | 39.130 | 0.00 | 0.00 | 0.00 | 1.73 |
5636 | 6240 | 4.576873 | TCACGGTCACTTGCAAAAATAAGA | 59.423 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
5637 | 6241 | 5.240623 | TCACGGTCACTTGCAAAAATAAGAT | 59.759 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
5638 | 6242 | 5.569059 | CACGGTCACTTGCAAAAATAAGATC | 59.431 | 40.000 | 0.00 | 0.00 | 0.00 | 2.75 |
5639 | 6243 | 5.473504 | ACGGTCACTTGCAAAAATAAGATCT | 59.526 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
5640 | 6244 | 6.653320 | ACGGTCACTTGCAAAAATAAGATCTA | 59.347 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
5641 | 6245 | 7.174253 | ACGGTCACTTGCAAAAATAAGATCTAA | 59.826 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
5642 | 6246 | 8.184192 | CGGTCACTTGCAAAAATAAGATCTAAT | 58.816 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
5718 | 6322 | 9.581289 | TTGGTTTATGGATCAGAAAGTAAAAGA | 57.419 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
5719 | 6323 | 9.753674 | TGGTTTATGGATCAGAAAGTAAAAGAT | 57.246 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
5723 | 6327 | 7.707624 | ATGGATCAGAAAGTAAAAGATTGCA | 57.292 | 32.000 | 0.00 | 0.00 | 0.00 | 4.08 |
5724 | 6328 | 7.523293 | TGGATCAGAAAGTAAAAGATTGCAA | 57.477 | 32.000 | 0.00 | 0.00 | 0.00 | 4.08 |
5725 | 6329 | 7.950512 | TGGATCAGAAAGTAAAAGATTGCAAA | 58.049 | 30.769 | 1.71 | 0.00 | 0.00 | 3.68 |
5726 | 6330 | 8.420222 | TGGATCAGAAAGTAAAAGATTGCAAAA | 58.580 | 29.630 | 1.71 | 0.00 | 0.00 | 2.44 |
5727 | 6331 | 9.428097 | GGATCAGAAAGTAAAAGATTGCAAAAT | 57.572 | 29.630 | 1.71 | 0.00 | 0.00 | 1.82 |
5741 | 6345 | 9.860898 | AAGATTGCAAAATAGTAGATTGGAAAC | 57.139 | 29.630 | 1.71 | 6.48 | 37.80 | 2.78 |
5742 | 6346 | 9.247861 | AGATTGCAAAATAGTAGATTGGAAACT | 57.752 | 29.630 | 1.71 | 8.12 | 37.80 | 2.66 |
5743 | 6347 | 9.860898 | GATTGCAAAATAGTAGATTGGAAACTT | 57.139 | 29.630 | 1.71 | 0.00 | 37.80 | 2.66 |
5764 | 6368 | 8.848474 | AACTTATATGATGGAAAATAGACCCG | 57.152 | 34.615 | 0.00 | 0.00 | 0.00 | 5.28 |
5765 | 6369 | 7.394816 | ACTTATATGATGGAAAATAGACCCGG | 58.605 | 38.462 | 0.00 | 0.00 | 0.00 | 5.73 |
5766 | 6370 | 3.508845 | ATGATGGAAAATAGACCCGGG | 57.491 | 47.619 | 22.25 | 22.25 | 0.00 | 5.73 |
5767 | 6371 | 1.493022 | TGATGGAAAATAGACCCGGGG | 59.507 | 52.381 | 27.92 | 12.73 | 0.00 | 5.73 |
5768 | 6372 | 0.850784 | ATGGAAAATAGACCCGGGGG | 59.149 | 55.000 | 27.92 | 5.70 | 42.03 | 5.40 |
5769 | 6373 | 1.152819 | GGAAAATAGACCCGGGGGC | 60.153 | 63.158 | 27.92 | 16.20 | 39.32 | 5.80 |
5770 | 6374 | 1.152819 | GAAAATAGACCCGGGGGCC | 60.153 | 63.158 | 27.92 | 13.76 | 39.32 | 5.80 |
5771 | 6375 | 1.928714 | GAAAATAGACCCGGGGGCCA | 61.929 | 60.000 | 27.92 | 0.54 | 39.32 | 5.36 |
5772 | 6376 | 1.293683 | AAAATAGACCCGGGGGCCAT | 61.294 | 55.000 | 27.92 | 4.01 | 39.32 | 4.40 |
5773 | 6377 | 0.402272 | AAATAGACCCGGGGGCCATA | 60.402 | 55.000 | 27.92 | 10.11 | 39.32 | 2.74 |
5774 | 6378 | 0.840722 | AATAGACCCGGGGGCCATAG | 60.841 | 60.000 | 27.92 | 0.00 | 39.32 | 2.23 |
5775 | 6379 | 2.765705 | ATAGACCCGGGGGCCATAGG | 62.766 | 65.000 | 27.92 | 4.40 | 39.32 | 2.57 |
5777 | 6381 | 4.771745 | ACCCGGGGGCCATAGGTT | 62.772 | 66.667 | 27.92 | 0.00 | 39.32 | 3.50 |
5778 | 6382 | 3.425925 | CCCGGGGGCCATAGGTTT | 61.426 | 66.667 | 14.71 | 0.00 | 0.00 | 3.27 |
5779 | 6383 | 2.194868 | CCGGGGGCCATAGGTTTC | 59.805 | 66.667 | 4.39 | 0.00 | 0.00 | 2.78 |
5780 | 6384 | 2.685534 | CCGGGGGCCATAGGTTTCA | 61.686 | 63.158 | 4.39 | 0.00 | 0.00 | 2.69 |
5781 | 6385 | 1.453197 | CGGGGGCCATAGGTTTCAC | 60.453 | 63.158 | 4.39 | 0.00 | 0.00 | 3.18 |
5782 | 6386 | 1.921869 | CGGGGGCCATAGGTTTCACT | 61.922 | 60.000 | 4.39 | 0.00 | 0.00 | 3.41 |
5783 | 6387 | 1.218844 | GGGGGCCATAGGTTTCACTA | 58.781 | 55.000 | 4.39 | 0.00 | 0.00 | 2.74 |
5784 | 6388 | 1.143073 | GGGGGCCATAGGTTTCACTAG | 59.857 | 57.143 | 4.39 | 0.00 | 0.00 | 2.57 |
5785 | 6389 | 2.124411 | GGGGCCATAGGTTTCACTAGA | 58.876 | 52.381 | 4.39 | 0.00 | 0.00 | 2.43 |
5786 | 6390 | 2.104963 | GGGGCCATAGGTTTCACTAGAG | 59.895 | 54.545 | 4.39 | 0.00 | 0.00 | 2.43 |
5787 | 6391 | 2.104963 | GGGCCATAGGTTTCACTAGAGG | 59.895 | 54.545 | 4.39 | 0.00 | 0.00 | 3.69 |
5788 | 6392 | 2.485657 | GGCCATAGGTTTCACTAGAGGC | 60.486 | 54.545 | 0.00 | 9.62 | 42.61 | 4.70 |
5789 | 6393 | 2.436173 | GCCATAGGTTTCACTAGAGGCT | 59.564 | 50.000 | 0.00 | 0.00 | 41.31 | 4.58 |
5790 | 6394 | 3.118223 | GCCATAGGTTTCACTAGAGGCTT | 60.118 | 47.826 | 0.00 | 0.00 | 41.31 | 4.35 |
5791 | 6395 | 4.698575 | CCATAGGTTTCACTAGAGGCTTC | 58.301 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
5792 | 6396 | 4.407296 | CCATAGGTTTCACTAGAGGCTTCT | 59.593 | 45.833 | 3.00 | 3.00 | 37.46 | 2.85 |
5793 | 6397 | 5.452636 | CCATAGGTTTCACTAGAGGCTTCTC | 60.453 | 48.000 | 0.00 | 0.00 | 37.79 | 2.87 |
5795 | 6399 | 3.767131 | AGGTTTCACTAGAGGCTTCTCTC | 59.233 | 47.826 | 0.00 | 0.00 | 43.99 | 3.20 |
5796 | 6400 | 3.511934 | GGTTTCACTAGAGGCTTCTCTCA | 59.488 | 47.826 | 0.00 | 0.00 | 43.99 | 3.27 |
5797 | 6401 | 4.021016 | GGTTTCACTAGAGGCTTCTCTCAA | 60.021 | 45.833 | 0.00 | 0.00 | 43.99 | 3.02 |
5798 | 6402 | 5.167845 | GTTTCACTAGAGGCTTCTCTCAAG | 58.832 | 45.833 | 0.00 | 0.00 | 43.99 | 3.02 |
5799 | 6403 | 4.308526 | TCACTAGAGGCTTCTCTCAAGA | 57.691 | 45.455 | 0.00 | 0.00 | 43.99 | 3.02 |
5800 | 6404 | 4.865905 | TCACTAGAGGCTTCTCTCAAGAT | 58.134 | 43.478 | 0.00 | 0.00 | 43.99 | 2.40 |
5801 | 6405 | 6.007485 | TCACTAGAGGCTTCTCTCAAGATA | 57.993 | 41.667 | 0.00 | 0.00 | 43.99 | 1.98 |
5802 | 6406 | 6.061441 | TCACTAGAGGCTTCTCTCAAGATAG | 58.939 | 44.000 | 0.00 | 0.00 | 43.99 | 2.08 |
5803 | 6407 | 4.827284 | ACTAGAGGCTTCTCTCAAGATAGC | 59.173 | 45.833 | 0.00 | 5.97 | 43.99 | 2.97 |
5804 | 6408 | 3.641046 | AGAGGCTTCTCTCAAGATAGCA | 58.359 | 45.455 | 13.17 | 0.00 | 43.99 | 3.49 |
5805 | 6409 | 4.029520 | AGAGGCTTCTCTCAAGATAGCAA | 58.970 | 43.478 | 13.17 | 0.00 | 43.99 | 3.91 |
5806 | 6410 | 4.469227 | AGAGGCTTCTCTCAAGATAGCAAA | 59.531 | 41.667 | 13.17 | 0.00 | 43.99 | 3.68 |
5807 | 6411 | 5.130809 | AGAGGCTTCTCTCAAGATAGCAAAT | 59.869 | 40.000 | 13.17 | 2.96 | 43.99 | 2.32 |
5808 | 6412 | 6.326064 | AGAGGCTTCTCTCAAGATAGCAAATA | 59.674 | 38.462 | 13.17 | 0.00 | 43.99 | 1.40 |
5809 | 6413 | 6.893583 | AGGCTTCTCTCAAGATAGCAAATAA | 58.106 | 36.000 | 13.17 | 0.00 | 37.38 | 1.40 |
5810 | 6414 | 7.516452 | AGGCTTCTCTCAAGATAGCAAATAAT | 58.484 | 34.615 | 13.17 | 0.00 | 37.38 | 1.28 |
5811 | 6415 | 7.444792 | AGGCTTCTCTCAAGATAGCAAATAATG | 59.555 | 37.037 | 13.17 | 0.00 | 37.38 | 1.90 |
5820 | 6424 | 2.962089 | GCAAATAATGCGCTGGGTG | 58.038 | 52.632 | 9.73 | 0.20 | 46.87 | 4.61 |
5821 | 6425 | 0.455410 | GCAAATAATGCGCTGGGTGA | 59.545 | 50.000 | 9.73 | 0.00 | 46.87 | 4.02 |
5822 | 6426 | 1.135141 | GCAAATAATGCGCTGGGTGAA | 60.135 | 47.619 | 9.73 | 0.00 | 46.87 | 3.18 |
5823 | 6427 | 2.529151 | CAAATAATGCGCTGGGTGAAC | 58.471 | 47.619 | 9.73 | 0.00 | 0.00 | 3.18 |
5824 | 6428 | 1.832883 | AATAATGCGCTGGGTGAACA | 58.167 | 45.000 | 9.73 | 0.00 | 0.00 | 3.18 |
5825 | 6429 | 1.832883 | ATAATGCGCTGGGTGAACAA | 58.167 | 45.000 | 9.73 | 0.00 | 0.00 | 2.83 |
5826 | 6430 | 1.610363 | TAATGCGCTGGGTGAACAAA | 58.390 | 45.000 | 9.73 | 0.00 | 0.00 | 2.83 |
5827 | 6431 | 0.968405 | AATGCGCTGGGTGAACAAAT | 59.032 | 45.000 | 9.73 | 0.00 | 0.00 | 2.32 |
5828 | 6432 | 0.968405 | ATGCGCTGGGTGAACAAATT | 59.032 | 45.000 | 9.73 | 0.00 | 0.00 | 1.82 |
5829 | 6433 | 1.610363 | TGCGCTGGGTGAACAAATTA | 58.390 | 45.000 | 9.73 | 0.00 | 0.00 | 1.40 |
5830 | 6434 | 1.268352 | TGCGCTGGGTGAACAAATTAC | 59.732 | 47.619 | 9.73 | 0.00 | 0.00 | 1.89 |
5831 | 6435 | 1.539827 | GCGCTGGGTGAACAAATTACT | 59.460 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
5832 | 6436 | 2.668279 | GCGCTGGGTGAACAAATTACTG | 60.668 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
5833 | 6437 | 2.552315 | CGCTGGGTGAACAAATTACTGT | 59.448 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
5834 | 6438 | 3.364964 | CGCTGGGTGAACAAATTACTGTC | 60.365 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
11 | 12 | 8.806634 | TCGAAATTTGTTCTCTGTTTCAAAATG | 58.193 | 29.630 | 0.00 | 0.00 | 34.32 | 2.32 |
99 | 101 | 7.550906 | TGTTCGGGATTTTTCAAAATTGTTCTT | 59.449 | 29.630 | 0.00 | 0.00 | 38.64 | 2.52 |
374 | 387 | 6.512342 | TTTTGTGTTCTTTCCGTTTTCCTA | 57.488 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
527 | 554 | 2.592993 | CCAACCTTCTCCCAGCCGA | 61.593 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
544 | 580 | 1.334329 | CGTACAAGTTCCGGTTTTGCC | 60.334 | 52.381 | 0.00 | 0.00 | 0.00 | 4.52 |
591 | 627 | 3.129462 | TCGCACAGAGAGATTCTTACTGG | 59.871 | 47.826 | 18.38 | 11.80 | 32.41 | 4.00 |
593 | 629 | 6.320164 | ACTTATCGCACAGAGAGATTCTTACT | 59.680 | 38.462 | 0.00 | 0.00 | 37.89 | 2.24 |
594 | 630 | 6.500041 | ACTTATCGCACAGAGAGATTCTTAC | 58.500 | 40.000 | 0.00 | 0.00 | 37.89 | 2.34 |
599 | 641 | 3.958704 | CGACTTATCGCACAGAGAGATT | 58.041 | 45.455 | 0.00 | 0.00 | 42.43 | 2.40 |
660 | 706 | 2.649331 | TCCTATATCGCGCCTTAAGC | 57.351 | 50.000 | 0.00 | 0.00 | 38.52 | 3.09 |
661 | 707 | 4.201724 | GCATTTCCTATATCGCGCCTTAAG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
662 | 708 | 3.682858 | GCATTTCCTATATCGCGCCTTAA | 59.317 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
663 | 709 | 3.259064 | GCATTTCCTATATCGCGCCTTA | 58.741 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
664 | 710 | 2.076863 | GCATTTCCTATATCGCGCCTT | 58.923 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
665 | 711 | 1.676014 | GGCATTTCCTATATCGCGCCT | 60.676 | 52.381 | 0.00 | 0.00 | 35.39 | 5.52 |
666 | 712 | 0.727398 | GGCATTTCCTATATCGCGCC | 59.273 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
667 | 713 | 0.370273 | CGGCATTTCCTATATCGCGC | 59.630 | 55.000 | 0.00 | 0.00 | 0.00 | 6.86 |
668 | 714 | 0.999406 | CCGGCATTTCCTATATCGCG | 59.001 | 55.000 | 0.00 | 0.00 | 0.00 | 5.87 |
669 | 715 | 2.380084 | TCCGGCATTTCCTATATCGC | 57.620 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
670 | 716 | 3.262420 | CCTTCCGGCATTTCCTATATCG | 58.738 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
671 | 717 | 3.263425 | TCCCTTCCGGCATTTCCTATATC | 59.737 | 47.826 | 0.00 | 0.00 | 0.00 | 1.63 |
672 | 718 | 3.256704 | TCCCTTCCGGCATTTCCTATAT | 58.743 | 45.455 | 0.00 | 0.00 | 0.00 | 0.86 |
673 | 719 | 2.637872 | CTCCCTTCCGGCATTTCCTATA | 59.362 | 50.000 | 0.00 | 0.00 | 0.00 | 1.31 |
674 | 720 | 1.421646 | CTCCCTTCCGGCATTTCCTAT | 59.578 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
675 | 721 | 0.837272 | CTCCCTTCCGGCATTTCCTA | 59.163 | 55.000 | 0.00 | 0.00 | 0.00 | 2.94 |
676 | 722 | 1.208165 | ACTCCCTTCCGGCATTTCCT | 61.208 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
677 | 723 | 0.544697 | TACTCCCTTCCGGCATTTCC | 59.455 | 55.000 | 0.00 | 0.00 | 0.00 | 3.13 |
678 | 724 | 1.475213 | CCTACTCCCTTCCGGCATTTC | 60.475 | 57.143 | 0.00 | 0.00 | 0.00 | 2.17 |
679 | 725 | 0.546598 | CCTACTCCCTTCCGGCATTT | 59.453 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
680 | 726 | 0.326238 | TCCTACTCCCTTCCGGCATT | 60.326 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
681 | 727 | 0.104934 | ATCCTACTCCCTTCCGGCAT | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
682 | 728 | 0.326238 | AATCCTACTCCCTTCCGGCA | 60.326 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
732 | 778 | 9.140286 | GTTCTTGGGCTTATTCTTCAAAATAAC | 57.860 | 33.333 | 0.00 | 0.00 | 30.11 | 1.89 |
1105 | 1156 | 0.382515 | AGCGAGAACTCTCCGTATGC | 59.617 | 55.000 | 1.13 | 0.00 | 39.79 | 3.14 |
1107 | 1158 | 1.944024 | CTCAGCGAGAACTCTCCGTAT | 59.056 | 52.381 | 1.13 | 0.00 | 39.79 | 3.06 |
1158 | 1209 | 2.868196 | CTCTCTTCGTCGACGCCA | 59.132 | 61.111 | 32.19 | 19.76 | 39.60 | 5.69 |
1202 | 1253 | 4.559063 | AGCTGGGCCTGCTATGCG | 62.559 | 66.667 | 33.30 | 0.00 | 36.91 | 4.73 |
1325 | 1376 | 2.633509 | GCAGCACTGGAGGCCAAAG | 61.634 | 63.158 | 5.01 | 0.89 | 30.80 | 2.77 |
2287 | 2351 | 9.573133 | AGTGTTGAAAGAAATAAGTGTTGAAAG | 57.427 | 29.630 | 0.00 | 0.00 | 0.00 | 2.62 |
2297 | 2361 | 6.336566 | TGCAAGCAAGTGTTGAAAGAAATAA | 58.663 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2303 | 2367 | 3.246699 | CCAATGCAAGCAAGTGTTGAAAG | 59.753 | 43.478 | 0.00 | 0.00 | 0.00 | 2.62 |
2304 | 2368 | 3.196463 | CCAATGCAAGCAAGTGTTGAAA | 58.804 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
2305 | 2369 | 2.168106 | ACCAATGCAAGCAAGTGTTGAA | 59.832 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
2306 | 2370 | 1.755959 | ACCAATGCAAGCAAGTGTTGA | 59.244 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
2307 | 2371 | 2.228138 | ACCAATGCAAGCAAGTGTTG | 57.772 | 45.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2308 | 2372 | 2.985957 | AACCAATGCAAGCAAGTGTT | 57.014 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2309 | 2373 | 2.483538 | GGAAACCAATGCAAGCAAGTGT | 60.484 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
2310 | 2374 | 2.137523 | GGAAACCAATGCAAGCAAGTG | 58.862 | 47.619 | 0.00 | 0.43 | 0.00 | 3.16 |
2337 | 2409 | 7.439381 | ACCCAACCGACAGTATATTAATACAG | 58.561 | 38.462 | 0.00 | 0.00 | 40.49 | 2.74 |
2350 | 2424 | 1.950909 | TGCTTTTAACCCAACCGACAG | 59.049 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
2354 | 2428 | 5.534407 | ACTTTTATGCTTTTAACCCAACCG | 58.466 | 37.500 | 0.00 | 0.00 | 0.00 | 4.44 |
2515 | 2592 | 0.971386 | ATTTCTTGTTGCCCCTGCTG | 59.029 | 50.000 | 0.00 | 0.00 | 38.71 | 4.41 |
2612 | 2691 | 9.689501 | CCCCTATAAACTAGGTCAAACAAATAA | 57.310 | 33.333 | 0.00 | 0.00 | 32.88 | 1.40 |
2613 | 2692 | 8.276477 | CCCCCTATAAACTAGGTCAAACAAATA | 58.724 | 37.037 | 0.00 | 0.00 | 32.88 | 1.40 |
2614 | 2693 | 7.123383 | CCCCCTATAAACTAGGTCAAACAAAT | 58.877 | 38.462 | 0.00 | 0.00 | 32.88 | 2.32 |
2615 | 2694 | 6.486941 | CCCCCTATAAACTAGGTCAAACAAA | 58.513 | 40.000 | 0.00 | 0.00 | 32.88 | 2.83 |
2616 | 2695 | 6.069705 | CCCCCTATAAACTAGGTCAAACAA | 57.930 | 41.667 | 0.00 | 0.00 | 32.88 | 2.83 |
2733 | 2994 | 2.503869 | AGGCTCCCCTTCAGTATCAT | 57.496 | 50.000 | 0.00 | 0.00 | 38.74 | 2.45 |
2743 | 3004 | 3.083997 | CTACGCCAAGGCTCCCCT | 61.084 | 66.667 | 9.73 | 0.00 | 45.77 | 4.79 |
2745 | 3006 | 2.125106 | CACTACGCCAAGGCTCCC | 60.125 | 66.667 | 9.73 | 0.00 | 39.32 | 4.30 |
2746 | 3007 | 1.610554 | TACCACTACGCCAAGGCTCC | 61.611 | 60.000 | 9.73 | 0.00 | 39.32 | 4.70 |
2747 | 3008 | 0.248289 | TTACCACTACGCCAAGGCTC | 59.752 | 55.000 | 9.73 | 0.00 | 39.32 | 4.70 |
2748 | 3009 | 0.688487 | TTTACCACTACGCCAAGGCT | 59.312 | 50.000 | 9.73 | 0.00 | 39.32 | 4.58 |
2750 | 3011 | 1.084289 | GCTTTACCACTACGCCAAGG | 58.916 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2751 | 3012 | 1.732259 | CAGCTTTACCACTACGCCAAG | 59.268 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
2754 | 3015 | 1.366854 | GGCAGCTTTACCACTACGCC | 61.367 | 60.000 | 0.00 | 0.00 | 0.00 | 5.68 |
2755 | 3016 | 1.693083 | CGGCAGCTTTACCACTACGC | 61.693 | 60.000 | 0.00 | 0.00 | 0.00 | 4.42 |
2756 | 3017 | 0.389426 | ACGGCAGCTTTACCACTACG | 60.389 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2757 | 3018 | 1.067071 | AGACGGCAGCTTTACCACTAC | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
2760 | 3021 | 0.517316 | CAAGACGGCAGCTTTACCAC | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
2761 | 3022 | 0.107831 | ACAAGACGGCAGCTTTACCA | 59.892 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
2762 | 3023 | 0.517316 | CACAAGACGGCAGCTTTACC | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2763 | 3024 | 1.194772 | GTCACAAGACGGCAGCTTTAC | 59.805 | 52.381 | 0.00 | 0.00 | 34.60 | 2.01 |
2765 | 3026 | 2.321213 | GTCACAAGACGGCAGCTTT | 58.679 | 52.632 | 0.00 | 0.00 | 34.60 | 3.51 |
2766 | 3027 | 4.049393 | GTCACAAGACGGCAGCTT | 57.951 | 55.556 | 0.00 | 0.00 | 34.60 | 3.74 |
2781 | 3042 | 2.467880 | TGAACCCATGACCTCCTAGTC | 58.532 | 52.381 | 0.00 | 0.00 | 37.28 | 2.59 |
2782 | 3043 | 2.642171 | TGAACCCATGACCTCCTAGT | 57.358 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2783 | 3044 | 2.840651 | ACTTGAACCCATGACCTCCTAG | 59.159 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2784 | 3045 | 2.838202 | GACTTGAACCCATGACCTCCTA | 59.162 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
2785 | 3046 | 1.630878 | GACTTGAACCCATGACCTCCT | 59.369 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
2786 | 3047 | 1.630878 | AGACTTGAACCCATGACCTCC | 59.369 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2787 | 3048 | 3.077359 | CAAGACTTGAACCCATGACCTC | 58.923 | 50.000 | 9.76 | 0.00 | 0.00 | 3.85 |
2790 | 3051 | 3.140325 | TCCAAGACTTGAACCCATGAC | 57.860 | 47.619 | 16.99 | 0.00 | 0.00 | 3.06 |
2791 | 3052 | 3.874383 | TTCCAAGACTTGAACCCATGA | 57.126 | 42.857 | 16.99 | 0.54 | 0.00 | 3.07 |
2792 | 3053 | 3.305608 | GCTTTCCAAGACTTGAACCCATG | 60.306 | 47.826 | 16.99 | 0.00 | 0.00 | 3.66 |
2793 | 3054 | 2.893489 | GCTTTCCAAGACTTGAACCCAT | 59.107 | 45.455 | 16.99 | 0.00 | 0.00 | 4.00 |
2794 | 3055 | 2.091885 | AGCTTTCCAAGACTTGAACCCA | 60.092 | 45.455 | 16.99 | 0.00 | 0.00 | 4.51 |
2795 | 3056 | 2.294512 | CAGCTTTCCAAGACTTGAACCC | 59.705 | 50.000 | 16.99 | 1.41 | 0.00 | 4.11 |
2796 | 3057 | 2.294512 | CCAGCTTTCCAAGACTTGAACC | 59.705 | 50.000 | 16.99 | 0.74 | 0.00 | 3.62 |
2797 | 3058 | 2.952310 | ACCAGCTTTCCAAGACTTGAAC | 59.048 | 45.455 | 16.99 | 1.38 | 0.00 | 3.18 |
2798 | 3059 | 3.297134 | ACCAGCTTTCCAAGACTTGAA | 57.703 | 42.857 | 16.99 | 6.40 | 0.00 | 2.69 |
2799 | 3060 | 3.646162 | TCTACCAGCTTTCCAAGACTTGA | 59.354 | 43.478 | 16.99 | 0.20 | 0.00 | 3.02 |
2800 | 3061 | 4.008074 | TCTACCAGCTTTCCAAGACTTG | 57.992 | 45.455 | 8.31 | 8.31 | 0.00 | 3.16 |
2801 | 3062 | 4.706842 | TTCTACCAGCTTTCCAAGACTT | 57.293 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
2802 | 3063 | 4.706842 | TTTCTACCAGCTTTCCAAGACT | 57.293 | 40.909 | 0.00 | 0.00 | 0.00 | 3.24 |
2803 | 3064 | 5.966742 | AATTTCTACCAGCTTTCCAAGAC | 57.033 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
2804 | 3065 | 6.779860 | ACTAATTTCTACCAGCTTTCCAAGA | 58.220 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2805 | 3066 | 7.606456 | TGTACTAATTTCTACCAGCTTTCCAAG | 59.394 | 37.037 | 0.00 | 0.00 | 0.00 | 3.61 |
2806 | 3067 | 7.389607 | GTGTACTAATTTCTACCAGCTTTCCAA | 59.610 | 37.037 | 0.00 | 0.00 | 0.00 | 3.53 |
2807 | 3068 | 6.877322 | GTGTACTAATTTCTACCAGCTTTCCA | 59.123 | 38.462 | 0.00 | 0.00 | 0.00 | 3.53 |
2808 | 3069 | 6.315642 | GGTGTACTAATTTCTACCAGCTTTCC | 59.684 | 42.308 | 0.00 | 0.00 | 0.00 | 3.13 |
2809 | 3070 | 7.104290 | AGGTGTACTAATTTCTACCAGCTTTC | 58.896 | 38.462 | 0.00 | 0.00 | 0.00 | 2.62 |
2810 | 3071 | 7.017319 | AGGTGTACTAATTTCTACCAGCTTT | 57.983 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2811 | 3072 | 6.622427 | AGGTGTACTAATTTCTACCAGCTT | 57.378 | 37.500 | 0.00 | 0.00 | 0.00 | 3.74 |
2812 | 3073 | 6.622427 | AAGGTGTACTAATTTCTACCAGCT | 57.378 | 37.500 | 0.00 | 0.00 | 0.00 | 4.24 |
2813 | 3074 | 8.422566 | AGATAAGGTGTACTAATTTCTACCAGC | 58.577 | 37.037 | 0.00 | 0.00 | 0.00 | 4.85 |
2838 | 3099 | 6.729690 | TGCCCCATCTATTCCAAAATAAAG | 57.270 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
2873 | 3134 | 6.903479 | GCAAAGCTCAAAACTCAAAATTGAAG | 59.097 | 34.615 | 0.00 | 0.00 | 36.64 | 3.02 |
2921 | 3183 | 1.760613 | AGGTGAGTGTGAAAGAACCGA | 59.239 | 47.619 | 0.00 | 0.00 | 32.83 | 4.69 |
2923 | 3185 | 5.179555 | GTGATTAGGTGAGTGTGAAAGAACC | 59.820 | 44.000 | 0.00 | 0.00 | 0.00 | 3.62 |
3052 | 3358 | 1.885887 | GCCCTTGAATTGTAGTGCACA | 59.114 | 47.619 | 21.04 | 1.84 | 34.51 | 4.57 |
3096 | 3402 | 8.559536 | TGTCATTAGACTCAATCACTCAAAAAC | 58.440 | 33.333 | 0.00 | 0.00 | 45.20 | 2.43 |
3125 | 3431 | 5.515797 | TGCTACATTACTCAAGCGTATCT | 57.484 | 39.130 | 0.00 | 0.00 | 37.80 | 1.98 |
3165 | 3517 | 3.444742 | ACATCCCACATGTATGCAACTTG | 59.555 | 43.478 | 0.00 | 2.04 | 38.79 | 3.16 |
3166 | 3518 | 3.700538 | ACATCCCACATGTATGCAACTT | 58.299 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
3215 | 3671 | 5.989477 | TCAGGAAATTGACGACCTATTGAT | 58.011 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
3218 | 3674 | 6.992715 | CCTTATCAGGAAATTGACGACCTATT | 59.007 | 38.462 | 0.00 | 0.00 | 44.19 | 1.73 |
3472 | 3941 | 9.442047 | ACAACCTTCAAATAACAAATGAAACAA | 57.558 | 25.926 | 0.00 | 0.00 | 33.08 | 2.83 |
3784 | 4267 | 7.166691 | ACACAGATCCACTATTAACGTACTT | 57.833 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3789 | 4272 | 4.259810 | CGCAACACAGATCCACTATTAACG | 60.260 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
3985 | 4524 | 6.325028 | CCTTCTCCACCTCATCAAAGAGTATA | 59.675 | 42.308 | 0.00 | 0.00 | 33.75 | 1.47 |
4021 | 4560 | 7.068716 | AGGAGCTGAAGAAAAACATTAAACACT | 59.931 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
4182 | 4721 | 2.370849 | ACCTGTTCCATAACAAGACCGT | 59.629 | 45.455 | 0.00 | 0.00 | 44.79 | 4.83 |
4411 | 4973 | 4.941873 | TCGTCACTTGCAACTAGAGAGATA | 59.058 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
4505 | 5072 | 3.699538 | AGACTGGTGAATACGCATGTCTA | 59.300 | 43.478 | 0.00 | 0.00 | 38.11 | 2.59 |
4513 | 5080 | 7.494625 | ACCAAAACATATAGACTGGTGAATACG | 59.505 | 37.037 | 0.00 | 0.00 | 35.86 | 3.06 |
4656 | 5247 | 3.000925 | CGTAGCATCAACGGAAACCATAC | 59.999 | 47.826 | 0.00 | 0.00 | 36.71 | 2.39 |
4743 | 5334 | 2.092049 | TCGCTAGGAACCTCCATCACTA | 60.092 | 50.000 | 0.00 | 0.00 | 39.61 | 2.74 |
4789 | 5380 | 0.609957 | TCGCTACGGGAAAGACCTCA | 60.610 | 55.000 | 0.00 | 0.00 | 38.98 | 3.86 |
4840 | 5431 | 4.523943 | AGCTCATTCACTTGCCATTTGTTA | 59.476 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
4845 | 5436 | 1.822990 | CCAGCTCATTCACTTGCCATT | 59.177 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
4864 | 5455 | 4.434520 | GAAGCACTACCACTGATTAGACC | 58.565 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
4881 | 5472 | 5.880332 | AGAAGCATCTTTTATTACCGAAGCA | 59.120 | 36.000 | 0.00 | 0.00 | 29.15 | 3.91 |
4929 | 5520 | 9.905713 | ACCACACATATTGTTATCTAGATGTTT | 57.094 | 29.630 | 15.79 | 0.00 | 35.67 | 2.83 |
4936 | 5527 | 6.385759 | ACCTGGACCACACATATTGTTATCTA | 59.614 | 38.462 | 0.00 | 0.00 | 35.67 | 1.98 |
4944 | 5535 | 3.258123 | GCAAAACCTGGACCACACATATT | 59.742 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
4957 | 5548 | 4.273969 | AGCAAAACAATGATGCAAAACCTG | 59.726 | 37.500 | 11.40 | 0.00 | 42.45 | 4.00 |
4965 | 5556 | 6.357198 | CAACAAACTAGCAAAACAATGATGC | 58.643 | 36.000 | 0.00 | 0.00 | 40.34 | 3.91 |
4973 | 5564 | 3.068165 | AGGGAGCAACAAACTAGCAAAAC | 59.932 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
5051 | 5642 | 6.644181 | CACACATAGGCTGTAACTATCTCATG | 59.356 | 42.308 | 0.00 | 0.00 | 35.91 | 3.07 |
5065 | 5656 | 1.140852 | ACACACACACACACATAGGCT | 59.859 | 47.619 | 0.00 | 0.00 | 0.00 | 4.58 |
5067 | 5658 | 2.287644 | CACACACACACACACACATAGG | 59.712 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5072 | 5663 | 1.395608 | GTACCACACACACACACACAC | 59.604 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
5074 | 5665 | 1.663643 | CAGTACCACACACACACACAC | 59.336 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
5082 | 5673 | 2.614829 | AAGACCACAGTACCACACAC | 57.385 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
5083 | 5674 | 4.101898 | ACATAAAGACCACAGTACCACACA | 59.898 | 41.667 | 0.00 | 0.00 | 0.00 | 3.72 |
5084 | 5675 | 4.638304 | ACATAAAGACCACAGTACCACAC | 58.362 | 43.478 | 0.00 | 0.00 | 0.00 | 3.82 |
5085 | 5676 | 4.345547 | TGACATAAAGACCACAGTACCACA | 59.654 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
5086 | 5677 | 4.890088 | TGACATAAAGACCACAGTACCAC | 58.110 | 43.478 | 0.00 | 0.00 | 0.00 | 4.16 |
5087 | 5678 | 5.755409 | ATGACATAAAGACCACAGTACCA | 57.245 | 39.130 | 0.00 | 0.00 | 0.00 | 3.25 |
5127 | 5720 | 2.163818 | TCGAGAAAAGACCGCAACAT | 57.836 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
5276 | 5871 | 6.876257 | GTGATTGAACTAGAGAGTGTGGAAAT | 59.124 | 38.462 | 0.00 | 0.00 | 35.52 | 2.17 |
5283 | 5878 | 6.272318 | GGAGATGTGATTGAACTAGAGAGTG | 58.728 | 44.000 | 0.00 | 0.00 | 35.52 | 3.51 |
5286 | 5881 | 4.651503 | GGGGAGATGTGATTGAACTAGAGA | 59.348 | 45.833 | 0.00 | 0.00 | 0.00 | 3.10 |
5300 | 5895 | 3.181454 | CCGCTTTTATGTAGGGGAGATGT | 60.181 | 47.826 | 0.00 | 0.00 | 45.78 | 3.06 |
5302 | 5897 | 2.224548 | GCCGCTTTTATGTAGGGGAGAT | 60.225 | 50.000 | 9.80 | 0.00 | 45.78 | 2.75 |
5322 | 5917 | 2.175715 | AGGGATTCTTTGGGTCCTATGC | 59.824 | 50.000 | 0.00 | 0.00 | 32.55 | 3.14 |
5323 | 5918 | 4.505742 | GCTAGGGATTCTTTGGGTCCTATG | 60.506 | 50.000 | 0.00 | 0.00 | 32.55 | 2.23 |
5324 | 5919 | 3.653352 | GCTAGGGATTCTTTGGGTCCTAT | 59.347 | 47.826 | 0.00 | 0.00 | 32.55 | 2.57 |
5375 | 5979 | 3.071479 | TGATGAAACGTTTAGGAGCCAC | 58.929 | 45.455 | 14.65 | 0.00 | 0.00 | 5.01 |
5386 | 5990 | 6.317789 | ACAACATCTTTGATGATGAAACGT | 57.682 | 33.333 | 19.58 | 0.00 | 44.71 | 3.99 |
5393 | 5997 | 6.906157 | ACCTCAAACAACATCTTTGATGAT | 57.094 | 33.333 | 13.63 | 0.00 | 37.09 | 2.45 |
5423 | 6027 | 1.830477 | ACATCAGAGCAGAAGAGGGAC | 59.170 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
5430 | 6034 | 2.038164 | AGCAGACAACATCAGAGCAGAA | 59.962 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
5437 | 6041 | 6.675002 | GCTCAAGAAATAGCAGACAACATCAG | 60.675 | 42.308 | 0.00 | 0.00 | 38.63 | 2.90 |
5448 | 6052 | 3.189910 | CAGTGCAAGCTCAAGAAATAGCA | 59.810 | 43.478 | 0.00 | 0.00 | 41.32 | 3.49 |
5449 | 6053 | 3.427233 | CCAGTGCAAGCTCAAGAAATAGC | 60.427 | 47.826 | 0.00 | 0.00 | 39.08 | 2.97 |
5450 | 6054 | 3.755378 | ACCAGTGCAAGCTCAAGAAATAG | 59.245 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
5451 | 6055 | 3.754965 | ACCAGTGCAAGCTCAAGAAATA | 58.245 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
5452 | 6056 | 2.590821 | ACCAGTGCAAGCTCAAGAAAT | 58.409 | 42.857 | 0.00 | 0.00 | 0.00 | 2.17 |
5453 | 6057 | 2.057137 | ACCAGTGCAAGCTCAAGAAA | 57.943 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5454 | 6058 | 2.057137 | AACCAGTGCAAGCTCAAGAA | 57.943 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5455 | 6059 | 2.057137 | AAACCAGTGCAAGCTCAAGA | 57.943 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5456 | 6060 | 2.877043 | AAAACCAGTGCAAGCTCAAG | 57.123 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5457 | 6061 | 2.159114 | GGAAAAACCAGTGCAAGCTCAA | 60.159 | 45.455 | 0.00 | 0.00 | 38.79 | 3.02 |
5458 | 6062 | 1.408702 | GGAAAAACCAGTGCAAGCTCA | 59.591 | 47.619 | 0.00 | 0.00 | 38.79 | 4.26 |
5459 | 6063 | 1.269778 | GGGAAAAACCAGTGCAAGCTC | 60.270 | 52.381 | 0.00 | 0.00 | 41.20 | 4.09 |
5460 | 6064 | 0.752658 | GGGAAAAACCAGTGCAAGCT | 59.247 | 50.000 | 0.00 | 0.00 | 41.20 | 3.74 |
5461 | 6065 | 0.752658 | AGGGAAAAACCAGTGCAAGC | 59.247 | 50.000 | 0.00 | 0.00 | 41.20 | 4.01 |
5462 | 6066 | 2.825205 | CAAGGGAAAAACCAGTGCAAG | 58.175 | 47.619 | 0.00 | 0.00 | 41.20 | 4.01 |
5463 | 6067 | 1.134551 | GCAAGGGAAAAACCAGTGCAA | 60.135 | 47.619 | 0.00 | 0.00 | 44.30 | 4.08 |
5464 | 6068 | 0.463620 | GCAAGGGAAAAACCAGTGCA | 59.536 | 50.000 | 0.00 | 0.00 | 44.30 | 4.57 |
5465 | 6069 | 0.463620 | TGCAAGGGAAAAACCAGTGC | 59.536 | 50.000 | 0.00 | 0.00 | 44.79 | 4.40 |
5466 | 6070 | 2.031120 | TCTGCAAGGGAAAAACCAGTG | 58.969 | 47.619 | 0.00 | 0.00 | 41.20 | 3.66 |
5467 | 6071 | 2.091885 | TCTCTGCAAGGGAAAAACCAGT | 60.092 | 45.455 | 0.00 | 0.00 | 43.45 | 4.00 |
5468 | 6072 | 2.586425 | TCTCTGCAAGGGAAAAACCAG | 58.414 | 47.619 | 0.00 | 0.00 | 43.45 | 4.00 |
5469 | 6073 | 2.746279 | TCTCTGCAAGGGAAAAACCA | 57.254 | 45.000 | 0.00 | 0.00 | 43.45 | 3.67 |
5477 | 6081 | 5.066593 | GGGAAATACTTATCTCTGCAAGGG | 58.933 | 45.833 | 0.00 | 0.00 | 33.69 | 3.95 |
5478 | 6082 | 5.934781 | AGGGAAATACTTATCTCTGCAAGG | 58.065 | 41.667 | 0.00 | 0.00 | 0.00 | 3.61 |
5479 | 6083 | 6.586344 | TGAGGGAAATACTTATCTCTGCAAG | 58.414 | 40.000 | 0.00 | 0.00 | 0.00 | 4.01 |
5480 | 6084 | 6.560003 | TGAGGGAAATACTTATCTCTGCAA | 57.440 | 37.500 | 0.00 | 0.00 | 0.00 | 4.08 |
5481 | 6085 | 5.453903 | GCTGAGGGAAATACTTATCTCTGCA | 60.454 | 44.000 | 12.69 | 0.00 | 42.05 | 4.41 |
5482 | 6086 | 4.994217 | GCTGAGGGAAATACTTATCTCTGC | 59.006 | 45.833 | 0.00 | 0.00 | 38.37 | 4.26 |
5483 | 6087 | 6.418057 | AGCTGAGGGAAATACTTATCTCTG | 57.582 | 41.667 | 0.00 | 0.00 | 0.00 | 3.35 |
5484 | 6088 | 8.554490 | TTAAGCTGAGGGAAATACTTATCTCT | 57.446 | 34.615 | 0.00 | 0.00 | 0.00 | 3.10 |
5485 | 6089 | 8.643324 | TCTTAAGCTGAGGGAAATACTTATCTC | 58.357 | 37.037 | 0.00 | 0.00 | 0.00 | 2.75 |
5486 | 6090 | 8.554490 | TCTTAAGCTGAGGGAAATACTTATCT | 57.446 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
5487 | 6091 | 9.047371 | GTTCTTAAGCTGAGGGAAATACTTATC | 57.953 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
5488 | 6092 | 8.773216 | AGTTCTTAAGCTGAGGGAAATACTTAT | 58.227 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
5489 | 6093 | 8.147244 | AGTTCTTAAGCTGAGGGAAATACTTA | 57.853 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
5490 | 6094 | 7.021998 | AGTTCTTAAGCTGAGGGAAATACTT | 57.978 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5491 | 6095 | 6.628644 | AGTTCTTAAGCTGAGGGAAATACT | 57.371 | 37.500 | 0.00 | 0.00 | 0.00 | 2.12 |
5492 | 6096 | 7.496263 | CCTTAGTTCTTAAGCTGAGGGAAATAC | 59.504 | 40.741 | 11.09 | 0.00 | 37.93 | 1.89 |
5493 | 6097 | 7.182206 | ACCTTAGTTCTTAAGCTGAGGGAAATA | 59.818 | 37.037 | 18.82 | 1.74 | 41.22 | 1.40 |
5494 | 6098 | 6.012421 | ACCTTAGTTCTTAAGCTGAGGGAAAT | 60.012 | 38.462 | 18.82 | 2.51 | 41.22 | 2.17 |
5495 | 6099 | 5.309806 | ACCTTAGTTCTTAAGCTGAGGGAAA | 59.690 | 40.000 | 18.82 | 0.00 | 41.22 | 3.13 |
5496 | 6100 | 4.844655 | ACCTTAGTTCTTAAGCTGAGGGAA | 59.155 | 41.667 | 18.82 | 0.00 | 41.22 | 3.97 |
5497 | 6101 | 4.426704 | ACCTTAGTTCTTAAGCTGAGGGA | 58.573 | 43.478 | 18.82 | 0.00 | 41.22 | 4.20 |
5498 | 6102 | 4.828072 | ACCTTAGTTCTTAAGCTGAGGG | 57.172 | 45.455 | 18.82 | 10.42 | 41.22 | 4.30 |
5499 | 6103 | 7.113658 | TGATACCTTAGTTCTTAAGCTGAGG | 57.886 | 40.000 | 15.22 | 15.22 | 42.22 | 3.86 |
5500 | 6104 | 9.255304 | GATTGATACCTTAGTTCTTAAGCTGAG | 57.745 | 37.037 | 0.00 | 0.00 | 37.93 | 3.35 |
5501 | 6105 | 8.204836 | GGATTGATACCTTAGTTCTTAAGCTGA | 58.795 | 37.037 | 0.00 | 0.00 | 37.93 | 4.26 |
5502 | 6106 | 7.987458 | TGGATTGATACCTTAGTTCTTAAGCTG | 59.013 | 37.037 | 0.00 | 0.00 | 37.93 | 4.24 |
5503 | 6107 | 8.090788 | TGGATTGATACCTTAGTTCTTAAGCT | 57.909 | 34.615 | 0.00 | 0.00 | 37.93 | 3.74 |
5504 | 6108 | 7.988028 | ACTGGATTGATACCTTAGTTCTTAAGC | 59.012 | 37.037 | 0.00 | 0.00 | 37.93 | 3.09 |
5507 | 6111 | 9.144298 | CCTACTGGATTGATACCTTAGTTCTTA | 57.856 | 37.037 | 0.00 | 0.00 | 34.57 | 2.10 |
5508 | 6112 | 7.844779 | TCCTACTGGATTGATACCTTAGTTCTT | 59.155 | 37.037 | 0.00 | 0.00 | 37.46 | 2.52 |
5509 | 6113 | 7.363031 | TCCTACTGGATTGATACCTTAGTTCT | 58.637 | 38.462 | 0.00 | 0.00 | 37.46 | 3.01 |
5510 | 6114 | 7.506261 | TCTCCTACTGGATTGATACCTTAGTTC | 59.494 | 40.741 | 0.00 | 0.00 | 42.29 | 3.01 |
5511 | 6115 | 7.288158 | GTCTCCTACTGGATTGATACCTTAGTT | 59.712 | 40.741 | 0.00 | 0.00 | 42.29 | 2.24 |
5512 | 6116 | 6.778559 | GTCTCCTACTGGATTGATACCTTAGT | 59.221 | 42.308 | 0.00 | 0.00 | 42.29 | 2.24 |
5513 | 6117 | 6.778069 | TGTCTCCTACTGGATTGATACCTTAG | 59.222 | 42.308 | 0.00 | 0.00 | 42.29 | 2.18 |
5514 | 6118 | 6.679542 | TGTCTCCTACTGGATTGATACCTTA | 58.320 | 40.000 | 0.00 | 0.00 | 42.29 | 2.69 |
5515 | 6119 | 5.529289 | TGTCTCCTACTGGATTGATACCTT | 58.471 | 41.667 | 0.00 | 0.00 | 42.29 | 3.50 |
5516 | 6120 | 5.144159 | TGTCTCCTACTGGATTGATACCT | 57.856 | 43.478 | 0.00 | 0.00 | 42.29 | 3.08 |
5517 | 6121 | 5.602628 | GTTGTCTCCTACTGGATTGATACC | 58.397 | 45.833 | 0.00 | 0.00 | 42.29 | 2.73 |
5518 | 6122 | 5.282510 | CGTTGTCTCCTACTGGATTGATAC | 58.717 | 45.833 | 0.00 | 0.00 | 42.29 | 2.24 |
5519 | 6123 | 4.202121 | GCGTTGTCTCCTACTGGATTGATA | 60.202 | 45.833 | 0.00 | 0.00 | 42.29 | 2.15 |
5520 | 6124 | 3.430929 | GCGTTGTCTCCTACTGGATTGAT | 60.431 | 47.826 | 0.00 | 0.00 | 42.29 | 2.57 |
5521 | 6125 | 2.094182 | GCGTTGTCTCCTACTGGATTGA | 60.094 | 50.000 | 0.00 | 0.00 | 42.29 | 2.57 |
5522 | 6126 | 2.271800 | GCGTTGTCTCCTACTGGATTG | 58.728 | 52.381 | 0.00 | 0.00 | 42.29 | 2.67 |
5523 | 6127 | 1.899814 | TGCGTTGTCTCCTACTGGATT | 59.100 | 47.619 | 0.00 | 0.00 | 42.29 | 3.01 |
5524 | 6128 | 1.204941 | GTGCGTTGTCTCCTACTGGAT | 59.795 | 52.381 | 0.00 | 0.00 | 42.29 | 3.41 |
5525 | 6129 | 0.601558 | GTGCGTTGTCTCCTACTGGA | 59.398 | 55.000 | 0.00 | 0.00 | 40.69 | 3.86 |
5526 | 6130 | 0.317160 | TGTGCGTTGTCTCCTACTGG | 59.683 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
5527 | 6131 | 2.148916 | TTGTGCGTTGTCTCCTACTG | 57.851 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
5528 | 6132 | 2.902705 | TTTGTGCGTTGTCTCCTACT | 57.097 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5529 | 6133 | 3.064207 | TGATTTGTGCGTTGTCTCCTAC | 58.936 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
5530 | 6134 | 3.064207 | GTGATTTGTGCGTTGTCTCCTA | 58.936 | 45.455 | 0.00 | 0.00 | 0.00 | 2.94 |
5531 | 6135 | 1.873591 | GTGATTTGTGCGTTGTCTCCT | 59.126 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
5532 | 6136 | 1.069227 | GGTGATTTGTGCGTTGTCTCC | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
5533 | 6137 | 1.601903 | TGGTGATTTGTGCGTTGTCTC | 59.398 | 47.619 | 0.00 | 0.00 | 0.00 | 3.36 |
5534 | 6138 | 1.674359 | TGGTGATTTGTGCGTTGTCT | 58.326 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5535 | 6139 | 2.483583 | TTGGTGATTTGTGCGTTGTC | 57.516 | 45.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5536 | 6140 | 3.305064 | GGTATTGGTGATTTGTGCGTTGT | 60.305 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
5537 | 6141 | 3.057596 | AGGTATTGGTGATTTGTGCGTTG | 60.058 | 43.478 | 0.00 | 0.00 | 0.00 | 4.10 |
5538 | 6142 | 3.057596 | CAGGTATTGGTGATTTGTGCGTT | 60.058 | 43.478 | 0.00 | 0.00 | 0.00 | 4.84 |
5539 | 6143 | 2.487762 | CAGGTATTGGTGATTTGTGCGT | 59.512 | 45.455 | 0.00 | 0.00 | 0.00 | 5.24 |
5540 | 6144 | 2.731968 | GCAGGTATTGGTGATTTGTGCG | 60.732 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
5541 | 6145 | 2.230992 | TGCAGGTATTGGTGATTTGTGC | 59.769 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
5542 | 6146 | 3.255395 | TGTGCAGGTATTGGTGATTTGTG | 59.745 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
5543 | 6147 | 3.495331 | TGTGCAGGTATTGGTGATTTGT | 58.505 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
5544 | 6148 | 4.517952 | TTGTGCAGGTATTGGTGATTTG | 57.482 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
5545 | 6149 | 4.343526 | TGTTTGTGCAGGTATTGGTGATTT | 59.656 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
5546 | 6150 | 3.894427 | TGTTTGTGCAGGTATTGGTGATT | 59.106 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
5547 | 6151 | 3.495331 | TGTTTGTGCAGGTATTGGTGAT | 58.505 | 40.909 | 0.00 | 0.00 | 0.00 | 3.06 |
5548 | 6152 | 2.937519 | TGTTTGTGCAGGTATTGGTGA | 58.062 | 42.857 | 0.00 | 0.00 | 0.00 | 4.02 |
5549 | 6153 | 3.724508 | TTGTTTGTGCAGGTATTGGTG | 57.275 | 42.857 | 0.00 | 0.00 | 0.00 | 4.17 |
5550 | 6154 | 3.894427 | TGATTGTTTGTGCAGGTATTGGT | 59.106 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
5551 | 6155 | 4.517952 | TGATTGTTTGTGCAGGTATTGG | 57.482 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
5552 | 6156 | 5.752472 | TGTTTGATTGTTTGTGCAGGTATTG | 59.248 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
5553 | 6157 | 5.911752 | TGTTTGATTGTTTGTGCAGGTATT | 58.088 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
5554 | 6158 | 5.528043 | TGTTTGATTGTTTGTGCAGGTAT | 57.472 | 34.783 | 0.00 | 0.00 | 0.00 | 2.73 |
5555 | 6159 | 4.991153 | TGTTTGATTGTTTGTGCAGGTA | 57.009 | 36.364 | 0.00 | 0.00 | 0.00 | 3.08 |
5556 | 6160 | 3.883830 | TGTTTGATTGTTTGTGCAGGT | 57.116 | 38.095 | 0.00 | 0.00 | 0.00 | 4.00 |
5557 | 6161 | 4.183101 | AGTTGTTTGATTGTTTGTGCAGG | 58.817 | 39.130 | 0.00 | 0.00 | 0.00 | 4.85 |
5558 | 6162 | 5.552807 | CAAGTTGTTTGATTGTTTGTGCAG | 58.447 | 37.500 | 0.00 | 0.00 | 39.21 | 4.41 |
5559 | 6163 | 4.142945 | GCAAGTTGTTTGATTGTTTGTGCA | 60.143 | 37.500 | 4.48 | 0.00 | 39.21 | 4.57 |
5560 | 6164 | 4.142945 | TGCAAGTTGTTTGATTGTTTGTGC | 60.143 | 37.500 | 4.48 | 0.00 | 39.21 | 4.57 |
5561 | 6165 | 5.315195 | GTGCAAGTTGTTTGATTGTTTGTG | 58.685 | 37.500 | 4.48 | 0.00 | 39.21 | 3.33 |
5562 | 6166 | 4.391523 | GGTGCAAGTTGTTTGATTGTTTGT | 59.608 | 37.500 | 4.48 | 0.00 | 39.21 | 2.83 |
5563 | 6167 | 4.201802 | GGGTGCAAGTTGTTTGATTGTTTG | 60.202 | 41.667 | 4.48 | 0.00 | 39.21 | 2.93 |
5564 | 6168 | 3.938334 | GGGTGCAAGTTGTTTGATTGTTT | 59.062 | 39.130 | 4.48 | 0.00 | 39.21 | 2.83 |
5565 | 6169 | 3.055530 | TGGGTGCAAGTTGTTTGATTGTT | 60.056 | 39.130 | 4.48 | 0.00 | 39.21 | 2.83 |
5566 | 6170 | 2.499289 | TGGGTGCAAGTTGTTTGATTGT | 59.501 | 40.909 | 4.48 | 0.00 | 39.21 | 2.71 |
5567 | 6171 | 3.176552 | TGGGTGCAAGTTGTTTGATTG | 57.823 | 42.857 | 4.48 | 0.00 | 39.21 | 2.67 |
5568 | 6172 | 3.530535 | GTTGGGTGCAAGTTGTTTGATT | 58.469 | 40.909 | 4.48 | 0.00 | 39.21 | 2.57 |
5569 | 6173 | 2.481104 | CGTTGGGTGCAAGTTGTTTGAT | 60.481 | 45.455 | 4.48 | 0.00 | 39.21 | 2.57 |
5570 | 6174 | 1.135257 | CGTTGGGTGCAAGTTGTTTGA | 60.135 | 47.619 | 4.48 | 0.00 | 39.21 | 2.69 |
5571 | 6175 | 1.276415 | CGTTGGGTGCAAGTTGTTTG | 58.724 | 50.000 | 4.48 | 0.00 | 39.88 | 2.93 |
5572 | 6176 | 0.459411 | GCGTTGGGTGCAAGTTGTTT | 60.459 | 50.000 | 4.48 | 0.00 | 0.00 | 2.83 |
5573 | 6177 | 1.140804 | GCGTTGGGTGCAAGTTGTT | 59.859 | 52.632 | 4.48 | 0.00 | 0.00 | 2.83 |
5574 | 6178 | 2.804856 | GCGTTGGGTGCAAGTTGT | 59.195 | 55.556 | 4.48 | 0.00 | 0.00 | 3.32 |
5575 | 6179 | 2.128853 | ATCGCGTTGGGTGCAAGTTG | 62.129 | 55.000 | 5.77 | 0.00 | 0.00 | 3.16 |
5576 | 6180 | 0.604243 | TATCGCGTTGGGTGCAAGTT | 60.604 | 50.000 | 5.77 | 0.00 | 0.00 | 2.66 |
5577 | 6181 | 0.604243 | TTATCGCGTTGGGTGCAAGT | 60.604 | 50.000 | 5.77 | 0.00 | 0.00 | 3.16 |
5578 | 6182 | 0.519519 | TTTATCGCGTTGGGTGCAAG | 59.480 | 50.000 | 5.77 | 0.00 | 0.00 | 4.01 |
5579 | 6183 | 0.519519 | CTTTATCGCGTTGGGTGCAA | 59.480 | 50.000 | 5.77 | 0.00 | 0.00 | 4.08 |
5580 | 6184 | 1.302383 | CCTTTATCGCGTTGGGTGCA | 61.302 | 55.000 | 5.77 | 0.00 | 0.00 | 4.57 |
5581 | 6185 | 1.427819 | CCTTTATCGCGTTGGGTGC | 59.572 | 57.895 | 5.77 | 0.00 | 0.00 | 5.01 |
5582 | 6186 | 2.094904 | CCCTTTATCGCGTTGGGTG | 58.905 | 57.895 | 5.77 | 0.00 | 33.49 | 4.61 |
5583 | 6187 | 1.681076 | ACCCTTTATCGCGTTGGGT | 59.319 | 52.632 | 18.64 | 18.64 | 45.47 | 4.51 |
5584 | 6188 | 0.450184 | CAACCCTTTATCGCGTTGGG | 59.550 | 55.000 | 5.77 | 13.78 | 43.26 | 4.12 |
5585 | 6189 | 1.129811 | GTCAACCCTTTATCGCGTTGG | 59.870 | 52.381 | 5.77 | 0.00 | 36.95 | 3.77 |
5586 | 6190 | 1.801771 | TGTCAACCCTTTATCGCGTTG | 59.198 | 47.619 | 5.77 | 0.02 | 37.52 | 4.10 |
5587 | 6191 | 2.172851 | TGTCAACCCTTTATCGCGTT | 57.827 | 45.000 | 5.77 | 0.00 | 0.00 | 4.84 |
5588 | 6192 | 2.172851 | TTGTCAACCCTTTATCGCGT | 57.827 | 45.000 | 5.77 | 0.00 | 0.00 | 6.01 |
5589 | 6193 | 2.031683 | GGATTGTCAACCCTTTATCGCG | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 5.87 |
5590 | 6194 | 2.357952 | GGGATTGTCAACCCTTTATCGC | 59.642 | 50.000 | 13.19 | 0.32 | 42.56 | 4.58 |
5598 | 6202 | 1.165270 | CGTGAAGGGATTGTCAACCC | 58.835 | 55.000 | 12.77 | 12.77 | 45.88 | 4.11 |
5599 | 6203 | 1.165270 | CCGTGAAGGGATTGTCAACC | 58.835 | 55.000 | 0.00 | 0.00 | 35.97 | 3.77 |
5600 | 6204 | 1.804748 | GACCGTGAAGGGATTGTCAAC | 59.195 | 52.381 | 0.00 | 0.00 | 46.96 | 3.18 |
5601 | 6205 | 1.418264 | TGACCGTGAAGGGATTGTCAA | 59.582 | 47.619 | 0.00 | 0.00 | 46.96 | 3.18 |
5602 | 6206 | 1.052617 | TGACCGTGAAGGGATTGTCA | 58.947 | 50.000 | 0.00 | 0.00 | 46.96 | 3.58 |
5603 | 6207 | 1.002087 | AGTGACCGTGAAGGGATTGTC | 59.998 | 52.381 | 0.00 | 0.00 | 46.96 | 3.18 |
5604 | 6208 | 1.056660 | AGTGACCGTGAAGGGATTGT | 58.943 | 50.000 | 0.00 | 0.00 | 46.96 | 2.71 |
5605 | 6209 | 1.806542 | CAAGTGACCGTGAAGGGATTG | 59.193 | 52.381 | 0.00 | 0.00 | 46.96 | 2.67 |
5606 | 6210 | 1.882352 | GCAAGTGACCGTGAAGGGATT | 60.882 | 52.381 | 0.00 | 0.00 | 46.96 | 3.01 |
5607 | 6211 | 0.321653 | GCAAGTGACCGTGAAGGGAT | 60.322 | 55.000 | 0.00 | 0.00 | 46.96 | 3.85 |
5608 | 6212 | 1.070786 | GCAAGTGACCGTGAAGGGA | 59.929 | 57.895 | 0.00 | 0.00 | 46.96 | 4.20 |
5609 | 6213 | 0.817634 | TTGCAAGTGACCGTGAAGGG | 60.818 | 55.000 | 0.00 | 0.00 | 46.96 | 3.95 |
5611 | 6215 | 2.842208 | TTTTGCAAGTGACCGTGAAG | 57.158 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5612 | 6216 | 3.791973 | ATTTTTGCAAGTGACCGTGAA | 57.208 | 38.095 | 0.00 | 0.00 | 0.00 | 3.18 |
5613 | 6217 | 4.576873 | TCTTATTTTTGCAAGTGACCGTGA | 59.423 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
5614 | 6218 | 4.854399 | TCTTATTTTTGCAAGTGACCGTG | 58.146 | 39.130 | 0.00 | 0.00 | 0.00 | 4.94 |
5615 | 6219 | 5.473504 | AGATCTTATTTTTGCAAGTGACCGT | 59.526 | 36.000 | 0.00 | 0.00 | 0.00 | 4.83 |
5616 | 6220 | 5.942872 | AGATCTTATTTTTGCAAGTGACCG | 58.057 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
5692 | 6296 | 9.581289 | TCTTTTACTTTCTGATCCATAAACCAA | 57.419 | 29.630 | 0.00 | 0.00 | 0.00 | 3.67 |
5693 | 6297 | 9.753674 | ATCTTTTACTTTCTGATCCATAAACCA | 57.246 | 29.630 | 0.00 | 0.00 | 0.00 | 3.67 |
5697 | 6301 | 9.241919 | TGCAATCTTTTACTTTCTGATCCATAA | 57.758 | 29.630 | 0.00 | 0.00 | 0.00 | 1.90 |
5698 | 6302 | 8.806429 | TGCAATCTTTTACTTTCTGATCCATA | 57.194 | 30.769 | 0.00 | 0.00 | 0.00 | 2.74 |
5699 | 6303 | 7.707624 | TGCAATCTTTTACTTTCTGATCCAT | 57.292 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5700 | 6304 | 7.523293 | TTGCAATCTTTTACTTTCTGATCCA | 57.477 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5701 | 6305 | 8.816640 | TTTTGCAATCTTTTACTTTCTGATCC | 57.183 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
5715 | 6319 | 9.860898 | GTTTCCAATCTACTATTTTGCAATCTT | 57.139 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
5716 | 6320 | 9.247861 | AGTTTCCAATCTACTATTTTGCAATCT | 57.752 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
5717 | 6321 | 9.860898 | AAGTTTCCAATCTACTATTTTGCAATC | 57.139 | 29.630 | 0.00 | 0.00 | 0.00 | 2.67 |
5738 | 6342 | 9.284968 | CGGGTCTATTTTCCATCATATAAGTTT | 57.715 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
5739 | 6343 | 7.883311 | CCGGGTCTATTTTCCATCATATAAGTT | 59.117 | 37.037 | 0.00 | 0.00 | 0.00 | 2.66 |
5740 | 6344 | 7.394816 | CCGGGTCTATTTTCCATCATATAAGT | 58.605 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
5741 | 6345 | 6.823689 | CCCGGGTCTATTTTCCATCATATAAG | 59.176 | 42.308 | 14.18 | 0.00 | 0.00 | 1.73 |
5742 | 6346 | 6.296778 | CCCCGGGTCTATTTTCCATCATATAA | 60.297 | 42.308 | 21.85 | 0.00 | 0.00 | 0.98 |
5743 | 6347 | 5.190925 | CCCCGGGTCTATTTTCCATCATATA | 59.809 | 44.000 | 21.85 | 0.00 | 0.00 | 0.86 |
5744 | 6348 | 4.018415 | CCCCGGGTCTATTTTCCATCATAT | 60.018 | 45.833 | 21.85 | 0.00 | 0.00 | 1.78 |
5745 | 6349 | 3.329520 | CCCCGGGTCTATTTTCCATCATA | 59.670 | 47.826 | 21.85 | 0.00 | 0.00 | 2.15 |
5746 | 6350 | 2.108250 | CCCCGGGTCTATTTTCCATCAT | 59.892 | 50.000 | 21.85 | 0.00 | 0.00 | 2.45 |
5747 | 6351 | 1.493022 | CCCCGGGTCTATTTTCCATCA | 59.507 | 52.381 | 21.85 | 0.00 | 0.00 | 3.07 |
5748 | 6352 | 1.202891 | CCCCCGGGTCTATTTTCCATC | 60.203 | 57.143 | 21.85 | 0.00 | 0.00 | 3.51 |
5749 | 6353 | 0.850784 | CCCCCGGGTCTATTTTCCAT | 59.149 | 55.000 | 21.85 | 0.00 | 0.00 | 3.41 |
5750 | 6354 | 1.928714 | GCCCCCGGGTCTATTTTCCA | 61.929 | 60.000 | 21.85 | 0.00 | 37.65 | 3.53 |
5751 | 6355 | 1.152819 | GCCCCCGGGTCTATTTTCC | 60.153 | 63.158 | 21.85 | 0.00 | 37.65 | 3.13 |
5752 | 6356 | 1.152819 | GGCCCCCGGGTCTATTTTC | 60.153 | 63.158 | 21.85 | 0.00 | 36.84 | 2.29 |
5753 | 6357 | 1.293683 | ATGGCCCCCGGGTCTATTTT | 61.294 | 55.000 | 21.85 | 0.00 | 41.25 | 1.82 |
5754 | 6358 | 0.402272 | TATGGCCCCCGGGTCTATTT | 60.402 | 55.000 | 21.85 | 1.76 | 41.25 | 1.40 |
5755 | 6359 | 0.840722 | CTATGGCCCCCGGGTCTATT | 60.841 | 60.000 | 21.85 | 3.54 | 41.25 | 1.73 |
5756 | 6360 | 1.229529 | CTATGGCCCCCGGGTCTAT | 60.230 | 63.158 | 21.85 | 16.13 | 41.25 | 1.98 |
5757 | 6361 | 2.203182 | CTATGGCCCCCGGGTCTA | 59.797 | 66.667 | 21.85 | 9.28 | 41.25 | 2.59 |
5758 | 6362 | 4.900259 | CCTATGGCCCCCGGGTCT | 62.900 | 72.222 | 21.85 | 0.94 | 41.25 | 3.85 |
5760 | 6364 | 4.771745 | AACCTATGGCCCCCGGGT | 62.772 | 66.667 | 21.85 | 1.96 | 37.65 | 5.28 |
5761 | 6365 | 3.425925 | AAACCTATGGCCCCCGGG | 61.426 | 66.667 | 15.80 | 15.80 | 38.57 | 5.73 |
5762 | 6366 | 2.194868 | GAAACCTATGGCCCCCGG | 59.805 | 66.667 | 0.00 | 0.00 | 0.00 | 5.73 |
5763 | 6367 | 1.453197 | GTGAAACCTATGGCCCCCG | 60.453 | 63.158 | 0.00 | 0.00 | 0.00 | 5.73 |
5764 | 6368 | 1.143073 | CTAGTGAAACCTATGGCCCCC | 59.857 | 57.143 | 0.00 | 0.00 | 37.80 | 5.40 |
5765 | 6369 | 2.104963 | CTCTAGTGAAACCTATGGCCCC | 59.895 | 54.545 | 0.00 | 0.00 | 37.80 | 5.80 |
5766 | 6370 | 2.104963 | CCTCTAGTGAAACCTATGGCCC | 59.895 | 54.545 | 0.00 | 0.00 | 37.80 | 5.80 |
5767 | 6371 | 2.485657 | GCCTCTAGTGAAACCTATGGCC | 60.486 | 54.545 | 0.00 | 0.00 | 37.80 | 5.36 |
5768 | 6372 | 2.436173 | AGCCTCTAGTGAAACCTATGGC | 59.564 | 50.000 | 0.00 | 0.00 | 37.80 | 4.40 |
5769 | 6373 | 4.407296 | AGAAGCCTCTAGTGAAACCTATGG | 59.593 | 45.833 | 0.00 | 0.00 | 37.80 | 2.74 |
5770 | 6374 | 5.596845 | GAGAAGCCTCTAGTGAAACCTATG | 58.403 | 45.833 | 0.00 | 0.00 | 35.13 | 2.23 |
5771 | 6375 | 5.862678 | GAGAAGCCTCTAGTGAAACCTAT | 57.137 | 43.478 | 0.00 | 0.00 | 35.13 | 2.57 |
5784 | 6388 | 4.399004 | TTGCTATCTTGAGAGAAGCCTC | 57.601 | 45.455 | 12.78 | 0.00 | 36.27 | 4.70 |
5785 | 6389 | 4.833478 | TTTGCTATCTTGAGAGAAGCCT | 57.167 | 40.909 | 12.78 | 0.00 | 36.27 | 4.58 |
5786 | 6390 | 7.583230 | CATTATTTGCTATCTTGAGAGAAGCC | 58.417 | 38.462 | 12.78 | 0.95 | 36.27 | 4.35 |
5803 | 6407 | 2.094803 | TGTTCACCCAGCGCATTATTTG | 60.095 | 45.455 | 11.47 | 0.00 | 0.00 | 2.32 |
5804 | 6408 | 2.166829 | TGTTCACCCAGCGCATTATTT | 58.833 | 42.857 | 11.47 | 0.00 | 0.00 | 1.40 |
5805 | 6409 | 1.832883 | TGTTCACCCAGCGCATTATT | 58.167 | 45.000 | 11.47 | 0.00 | 0.00 | 1.40 |
5806 | 6410 | 1.832883 | TTGTTCACCCAGCGCATTAT | 58.167 | 45.000 | 11.47 | 0.00 | 0.00 | 1.28 |
5807 | 6411 | 1.610363 | TTTGTTCACCCAGCGCATTA | 58.390 | 45.000 | 11.47 | 0.00 | 0.00 | 1.90 |
5808 | 6412 | 0.968405 | ATTTGTTCACCCAGCGCATT | 59.032 | 45.000 | 11.47 | 0.00 | 0.00 | 3.56 |
5809 | 6413 | 0.968405 | AATTTGTTCACCCAGCGCAT | 59.032 | 45.000 | 11.47 | 0.00 | 0.00 | 4.73 |
5810 | 6414 | 1.268352 | GTAATTTGTTCACCCAGCGCA | 59.732 | 47.619 | 11.47 | 0.00 | 0.00 | 6.09 |
5811 | 6415 | 1.539827 | AGTAATTTGTTCACCCAGCGC | 59.460 | 47.619 | 0.00 | 0.00 | 0.00 | 5.92 |
5812 | 6416 | 2.552315 | ACAGTAATTTGTTCACCCAGCG | 59.448 | 45.455 | 0.00 | 0.00 | 0.00 | 5.18 |
5813 | 6417 | 4.160736 | GACAGTAATTTGTTCACCCAGC | 57.839 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.