Multiple sequence alignment - TraesCS6B01G275900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G275900 chr6B 100.000 5065 0 0 1 5065 499018740 499013676 0.000000e+00 9354.0
1 TraesCS6B01G275900 chr6B 84.101 868 97 16 3409 4253 605767146 605766297 0.000000e+00 800.0
2 TraesCS6B01G275900 chr6B 99.174 121 1 0 147 267 499018475 499018355 8.540000e-53 219.0
3 TraesCS6B01G275900 chr6B 99.174 121 1 0 266 386 499018594 499018474 8.540000e-53 219.0
4 TraesCS6B01G275900 chr3A 94.949 4059 146 25 266 4294 108918126 108922155 0.000000e+00 6305.0
5 TraesCS6B01G275900 chr3A 91.528 602 46 5 872 1471 46616346 46615748 0.000000e+00 824.0
6 TraesCS6B01G275900 chr3A 84.606 864 96 19 3409 4252 271639715 271640561 0.000000e+00 824.0
7 TraesCS6B01G275900 chr3A 83.562 803 81 12 1554 2338 46615749 46614980 0.000000e+00 704.0
8 TraesCS6B01G275900 chr3A 87.336 458 37 12 2789 3228 46612020 46611566 5.850000e-139 505.0
9 TraesCS6B01G275900 chr3A 87.923 414 38 5 3760 4169 209650947 209651352 1.280000e-130 477.0
10 TraesCS6B01G275900 chr3A 84.540 511 45 17 2332 2821 46614946 46614449 4.590000e-130 475.0
11 TraesCS6B01G275900 chr3A 87.306 386 34 10 2615 2990 271639331 271639711 1.300000e-115 427.0
12 TraesCS6B01G275900 chr3A 87.467 375 37 7 3388 3756 209642654 209643024 1.690000e-114 424.0
13 TraesCS6B01G275900 chr3A 91.367 278 12 2 1 267 108917969 108918245 2.230000e-98 370.0
14 TraesCS6B01G275900 chr3A 86.207 203 15 7 3029 3225 209642392 209642587 1.850000e-49 207.0
15 TraesCS6B01G275900 chr3A 88.542 96 10 1 1462 1556 507291584 507291489 1.150000e-21 115.0
16 TraesCS6B01G275900 chr6A 95.345 3802 120 25 523 4293 461835925 461839700 0.000000e+00 5987.0
17 TraesCS6B01G275900 chr6A 88.462 156 17 1 4482 4637 461841961 461842115 2.410000e-43 187.0
18 TraesCS6B01G275900 chr6A 91.753 97 6 2 4374 4468 461841437 461841533 3.180000e-27 134.0
19 TraesCS6B01G275900 chr6A 100.000 30 0 0 4319 4348 594980995 594981024 7.080000e-04 56.5
20 TraesCS6B01G275900 chr6D 91.429 1085 74 9 3388 4461 324521803 324522879 0.000000e+00 1471.0
21 TraesCS6B01G275900 chr6D 89.670 910 62 7 586 1471 324519136 324520037 0.000000e+00 1131.0
22 TraesCS6B01G275900 chr6D 89.342 638 41 9 1554 2168 324520036 324520669 0.000000e+00 776.0
23 TraesCS6B01G275900 chr6D 89.087 449 18 17 2791 3225 324521309 324521740 3.470000e-146 529.0
24 TraesCS6B01G275900 chr6D 86.076 316 21 15 2424 2737 324521008 324521302 8.180000e-83 318.0
25 TraesCS6B01G275900 chr6D 90.710 183 13 2 2207 2388 324520825 324521004 1.820000e-59 241.0
26 TraesCS6B01G275900 chr6D 92.701 137 8 2 3233 3368 193787299 193787164 4.000000e-46 196.0
27 TraesCS6B01G275900 chr6D 79.026 267 18 12 266 505 324518498 324518753 1.140000e-31 148.0
28 TraesCS6B01G275900 chr6D 90.805 87 7 1 1472 1557 142148799 142148713 1.150000e-21 115.0
29 TraesCS6B01G275900 chr6D 100.000 30 0 0 4319 4348 466789333 466789362 7.080000e-04 56.5
30 TraesCS6B01G275900 chr3D 86.810 1069 91 30 2186 3228 35670489 35669445 0.000000e+00 1147.0
31 TraesCS6B01G275900 chr3D 86.216 740 78 22 1101 1831 35694926 35694202 0.000000e+00 780.0
32 TraesCS6B01G275900 chr3D 85.016 307 29 14 1858 2158 35689449 35689154 3.830000e-76 296.0
33 TraesCS6B01G275900 chr3D 97.222 36 1 0 4314 4349 26450341 26450376 1.520000e-05 62.1
34 TraesCS6B01G275900 chrUn 86.696 917 78 27 2332 3225 39274823 39275718 0.000000e+00 977.0
35 TraesCS6B01G275900 chrUn 92.180 601 43 4 872 1471 39273139 39273736 0.000000e+00 846.0
36 TraesCS6B01G275900 chrUn 83.915 516 47 14 1554 2054 39273735 39274229 1.280000e-125 460.0
37 TraesCS6B01G275900 chrUn 91.353 266 16 4 3388 3649 39275785 39276047 1.730000e-94 357.0
38 TraesCS6B01G275900 chrUn 92.701 137 8 2 3233 3368 413530014 413529879 4.000000e-46 196.0
39 TraesCS6B01G275900 chrUn 83.974 156 18 7 2184 2338 39274640 39274789 5.290000e-30 143.0
40 TraesCS6B01G275900 chr7A 86.227 864 82 17 3409 4252 165528857 165529703 0.000000e+00 902.0
41 TraesCS6B01G275900 chr7A 87.565 386 28 12 2616 2990 165528477 165528853 3.620000e-116 429.0
42 TraesCS6B01G275900 chr7A 93.431 137 7 2 3233 3368 686658100 686657965 8.600000e-48 202.0
43 TraesCS6B01G275900 chr1D 85.244 881 86 21 3409 4266 28959755 28958896 0.000000e+00 867.0
44 TraesCS6B01G275900 chr1D 87.333 300 25 7 2697 2990 28960051 28959759 1.050000e-86 331.0
45 TraesCS6B01G275900 chr5A 84.722 864 95 19 3409 4252 237942087 237941241 0.000000e+00 830.0
46 TraesCS6B01G275900 chr5A 88.312 385 29 9 2616 2990 237942469 237942091 1.000000e-121 448.0
47 TraesCS6B01G275900 chr5A 91.139 79 7 0 1472 1550 458199272 458199194 1.930000e-19 108.0
48 TraesCS6B01G275900 chr5A 96.970 33 1 0 4316 4348 118646912 118646944 7.080000e-04 56.5
49 TraesCS6B01G275900 chr2B 83.082 863 96 31 3393 4220 62995174 62994327 0.000000e+00 739.0
50 TraesCS6B01G275900 chr2B 86.942 582 62 6 877 1452 62996415 62995842 4.280000e-180 641.0
51 TraesCS6B01G275900 chr2B 84.091 440 43 17 2822 3238 62995670 62995235 2.840000e-107 399.0
52 TraesCS6B01G275900 chr2B 94.161 137 6 2 3233 3368 357214645 357214780 1.850000e-49 207.0
53 TraesCS6B01G275900 chr2B 94.161 137 7 1 3233 3368 391082592 391082456 1.850000e-49 207.0
54 TraesCS6B01G275900 chr2B 89.781 137 12 2 3233 3368 343697278 343697143 1.870000e-39 174.0
55 TraesCS6B01G275900 chr2B 91.463 82 4 3 1469 1550 394910784 394910862 5.360000e-20 110.0
56 TraesCS6B01G275900 chr7D 87.443 661 56 11 804 1463 72448015 72447381 0.000000e+00 736.0
57 TraesCS6B01G275900 chr7D 80.290 345 28 15 1554 1862 72447376 72447036 1.840000e-54 224.0
58 TraesCS6B01G275900 chr7D 100.000 30 0 0 4319 4348 627271205 627271234 7.080000e-04 56.5
59 TraesCS6B01G275900 chr2A 82.596 701 81 18 760 1452 40561175 40560508 9.450000e-162 580.0
60 TraesCS6B01G275900 chr2A 82.759 551 47 19 3391 3911 40559562 40559030 1.000000e-121 448.0
61 TraesCS6B01G275900 chr2A 84.101 434 43 10 2803 3214 40560072 40559643 3.670000e-106 396.0
62 TraesCS6B01G275900 chr2D 87.168 452 45 10 1001 1450 36584578 36584138 7.570000e-138 501.0
63 TraesCS6B01G275900 chr2D 89.888 89 8 1 1470 1557 512165838 512165926 4.140000e-21 113.0
64 TraesCS6B01G275900 chr7B 89.011 91 9 1 1467 1556 428965934 428965844 1.490000e-20 111.0
65 TraesCS6B01G275900 chr7B 97.059 34 1 0 4319 4352 462734079 462734046 1.970000e-04 58.4
66 TraesCS6B01G275900 chr5D 89.535 86 8 1 1465 1550 188826529 188826613 1.930000e-19 108.0
67 TraesCS6B01G275900 chr1A 88.060 67 7 1 1589 1654 68373694 68373760 1.510000e-10 78.7
68 TraesCS6B01G275900 chr4A 86.364 66 6 2 4641 4704 566301540 566301476 9.100000e-08 69.4
69 TraesCS6B01G275900 chr4D 100.000 34 0 0 4319 4352 421897328 421897295 4.230000e-06 63.9
70 TraesCS6B01G275900 chr3B 87.500 48 6 0 4301 4348 672778061 672778108 7.080000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G275900 chr6B 499013676 499018740 5064 True 3264.000000 9354 99.449333 1 5065 3 chr6B.!!$R2 5064
1 TraesCS6B01G275900 chr6B 605766297 605767146 849 True 800.000000 800 84.101000 3409 4253 1 chr6B.!!$R1 844
2 TraesCS6B01G275900 chr3A 108917969 108922155 4186 False 3337.500000 6305 93.158000 1 4294 2 chr3A.!!$F2 4293
3 TraesCS6B01G275900 chr3A 46611566 46616346 4780 True 627.000000 824 86.741500 872 3228 4 chr3A.!!$R2 2356
4 TraesCS6B01G275900 chr3A 271639331 271640561 1230 False 625.500000 824 85.956000 2615 4252 2 chr3A.!!$F4 1637
5 TraesCS6B01G275900 chr3A 209642392 209643024 632 False 315.500000 424 86.837000 3029 3756 2 chr3A.!!$F3 727
6 TraesCS6B01G275900 chr6A 461835925 461842115 6190 False 2102.666667 5987 91.853333 523 4637 3 chr6A.!!$F2 4114
7 TraesCS6B01G275900 chr6D 324518498 324522879 4381 False 659.142857 1471 87.905714 266 4461 7 chr6D.!!$F2 4195
8 TraesCS6B01G275900 chr3D 35669445 35670489 1044 True 1147.000000 1147 86.810000 2186 3228 1 chr3D.!!$R1 1042
9 TraesCS6B01G275900 chr3D 35694202 35694926 724 True 780.000000 780 86.216000 1101 1831 1 chr3D.!!$R3 730
10 TraesCS6B01G275900 chrUn 39273139 39276047 2908 False 556.600000 977 87.623600 872 3649 5 chrUn.!!$F1 2777
11 TraesCS6B01G275900 chr7A 165528477 165529703 1226 False 665.500000 902 86.896000 2616 4252 2 chr7A.!!$F1 1636
12 TraesCS6B01G275900 chr1D 28958896 28960051 1155 True 599.000000 867 86.288500 2697 4266 2 chr1D.!!$R1 1569
13 TraesCS6B01G275900 chr5A 237941241 237942469 1228 True 639.000000 830 86.517000 2616 4252 2 chr5A.!!$R2 1636
14 TraesCS6B01G275900 chr2B 62994327 62996415 2088 True 593.000000 739 84.705000 877 4220 3 chr2B.!!$R3 3343
15 TraesCS6B01G275900 chr7D 72447036 72448015 979 True 480.000000 736 83.866500 804 1862 2 chr7D.!!$R1 1058
16 TraesCS6B01G275900 chr2A 40559030 40561175 2145 True 474.666667 580 83.152000 760 3911 3 chr2A.!!$R1 3151

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
847 1214 0.034089 AGCCCAGCCCAGTGTAATTC 60.034 55.000 0.00 0.0 0.00 2.17 F
2157 2918 2.347731 GCAGGGAGCAACTGTAACTAC 58.652 52.381 4.59 0.0 44.79 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2480 3431 0.250727 TAGAAGCCAACCACACCTGC 60.251 55.0 0.0 0.0 0.0 4.85 R
4101 7650 0.396811 AAGGTACGCTTGCTTCTGGT 59.603 50.0 0.0 0.0 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 9.498176 TTTATAGTTAACTCTGTTCCAAAGGTC 57.502 33.333 12.39 0.00 0.00 3.85
52 53 5.368989 AGTTAACTCTGTTCCAAAGGTCAG 58.631 41.667 1.12 0.00 0.00 3.51
80 81 9.755804 TCTGCATTTAATTGTCATTTTGTTGTA 57.244 25.926 0.00 0.00 0.00 2.41
150 162 1.536766 CAAGTACACCCATGCACACAG 59.463 52.381 0.00 0.00 0.00 3.66
160 172 3.369681 CCCATGCACACAGCCAAATATTT 60.370 43.478 0.00 0.00 44.83 1.40
192 204 0.458669 GGACATAACCTCGCCGAAGA 59.541 55.000 0.00 0.00 0.00 2.87
198 210 1.726853 AACCTCGCCGAAGAAATCAG 58.273 50.000 0.00 0.00 0.00 2.90
200 212 0.740868 CCTCGCCGAAGAAATCAGCA 60.741 55.000 0.00 0.00 30.41 4.41
220 232 0.456312 GCTTGCAACAGCAGAGCATC 60.456 55.000 5.50 0.00 39.72 3.91
221 233 0.179197 CTTGCAACAGCAGAGCATCG 60.179 55.000 0.00 0.00 42.67 3.84
222 234 0.603439 TTGCAACAGCAGAGCATCGA 60.603 50.000 0.00 0.00 42.67 3.59
223 235 1.293963 TGCAACAGCAGAGCATCGAC 61.294 55.000 0.00 0.00 42.67 4.20
224 236 1.293963 GCAACAGCAGAGCATCGACA 61.294 55.000 0.00 0.00 42.67 4.35
225 237 1.366679 CAACAGCAGAGCATCGACAT 58.633 50.000 0.00 0.00 42.67 3.06
226 238 1.326852 CAACAGCAGAGCATCGACATC 59.673 52.381 0.00 0.00 42.67 3.06
227 239 0.533951 ACAGCAGAGCATCGACATCA 59.466 50.000 0.00 0.00 42.67 3.07
228 240 1.066645 ACAGCAGAGCATCGACATCAA 60.067 47.619 0.00 0.00 42.67 2.57
229 241 2.210961 CAGCAGAGCATCGACATCAAT 58.789 47.619 0.00 0.00 42.67 2.57
230 242 2.221286 CAGCAGAGCATCGACATCAATC 59.779 50.000 0.00 0.00 42.67 2.67
231 243 2.159000 AGCAGAGCATCGACATCAATCA 60.159 45.455 0.00 0.00 42.67 2.57
232 244 2.610833 GCAGAGCATCGACATCAATCAA 59.389 45.455 0.00 0.00 42.67 2.57
233 245 3.545624 GCAGAGCATCGACATCAATCAAC 60.546 47.826 0.00 0.00 42.67 3.18
234 246 2.862536 AGAGCATCGACATCAATCAACG 59.137 45.455 0.00 0.00 42.67 4.10
235 247 1.328680 AGCATCGACATCAATCAACGC 59.671 47.619 0.00 0.00 0.00 4.84
236 248 1.328680 GCATCGACATCAATCAACGCT 59.671 47.619 0.00 0.00 0.00 5.07
237 249 2.223112 GCATCGACATCAATCAACGCTT 60.223 45.455 0.00 0.00 0.00 4.68
238 250 3.348309 CATCGACATCAATCAACGCTTG 58.652 45.455 0.00 0.00 0.00 4.01
239 251 2.682836 TCGACATCAATCAACGCTTGA 58.317 42.857 3.49 3.49 45.01 3.02
250 262 4.902443 TCAACGCTTGATTGGTTGTTAA 57.098 36.364 3.44 0.00 41.27 2.01
251 263 5.250235 TCAACGCTTGATTGGTTGTTAAA 57.750 34.783 3.44 0.00 41.27 1.52
252 264 5.277825 TCAACGCTTGATTGGTTGTTAAAG 58.722 37.500 3.44 0.00 41.27 1.85
253 265 3.638484 ACGCTTGATTGGTTGTTAAAGC 58.362 40.909 0.00 0.00 37.31 3.51
254 266 2.986479 CGCTTGATTGGTTGTTAAAGCC 59.014 45.455 0.00 0.00 37.35 4.35
255 267 3.551863 CGCTTGATTGGTTGTTAAAGCCA 60.552 43.478 0.00 0.00 37.35 4.75
256 268 3.740832 GCTTGATTGGTTGTTAAAGCCAC 59.259 43.478 0.00 0.00 35.19 5.01
257 269 4.739137 GCTTGATTGGTTGTTAAAGCCACA 60.739 41.667 0.00 0.00 35.19 4.17
258 270 4.582701 TGATTGGTTGTTAAAGCCACAG 57.417 40.909 0.00 0.00 32.62 3.66
259 271 4.211125 TGATTGGTTGTTAAAGCCACAGA 58.789 39.130 0.00 0.00 32.62 3.41
260 272 4.646945 TGATTGGTTGTTAAAGCCACAGAA 59.353 37.500 0.00 0.00 32.62 3.02
261 273 5.127845 TGATTGGTTGTTAAAGCCACAGAAA 59.872 36.000 0.00 0.00 32.62 2.52
262 274 4.647424 TGGTTGTTAAAGCCACAGAAAG 57.353 40.909 0.00 0.00 32.62 2.62
263 275 4.020543 TGGTTGTTAAAGCCACAGAAAGT 58.979 39.130 0.00 0.00 32.62 2.66
264 276 4.464597 TGGTTGTTAAAGCCACAGAAAGTT 59.535 37.500 0.00 0.00 32.62 2.66
265 277 5.041287 GGTTGTTAAAGCCACAGAAAGTTC 58.959 41.667 0.00 0.00 0.00 3.01
266 278 5.393678 GGTTGTTAAAGCCACAGAAAGTTCA 60.394 40.000 0.00 0.00 0.00 3.18
267 279 5.243426 TGTTAAAGCCACAGAAAGTTCAC 57.757 39.130 0.00 0.00 0.00 3.18
268 280 4.702612 TGTTAAAGCCACAGAAAGTTCACA 59.297 37.500 0.00 0.00 0.00 3.58
269 281 5.163663 TGTTAAAGCCACAGAAAGTTCACAG 60.164 40.000 0.00 0.00 0.00 3.66
270 282 1.312815 AGCCACAGAAAGTTCACAGC 58.687 50.000 0.00 0.00 0.00 4.40
271 283 0.312102 GCCACAGAAAGTTCACAGCC 59.688 55.000 0.00 0.00 0.00 4.85
274 286 2.426738 CCACAGAAAGTTCACAGCCAAA 59.573 45.455 0.00 0.00 0.00 3.28
311 323 0.458669 GGACATAACCTCGCCGAAGA 59.541 55.000 0.00 0.00 0.00 2.87
315 327 3.195661 ACATAACCTCGCCGAAGAAATC 58.804 45.455 0.00 0.00 0.00 2.17
317 329 1.726853 AACCTCGCCGAAGAAATCAG 58.273 50.000 0.00 0.00 0.00 2.90
319 331 0.740868 CCTCGCCGAAGAAATCAGCA 60.741 55.000 0.00 0.00 30.41 4.41
335 347 1.081376 GCAGCTTGCAACAGCAGAG 60.081 57.895 12.73 3.65 44.26 3.35
336 348 1.081376 CAGCTTGCAACAGCAGAGC 60.081 57.895 12.73 4.69 42.84 4.09
417 430 8.139989 GGATACTTGATGGGATTGATTTTTCAG 58.860 37.037 0.00 0.00 0.00 3.02
426 439 5.418840 GGGATTGATTTTTCAGAAGGTGCTA 59.581 40.000 0.00 0.00 0.00 3.49
543 598 6.603237 TTGTTAGATGTGTGTTTGACTCTG 57.397 37.500 0.00 0.00 0.00 3.35
580 635 5.485708 TGGGGGTTTGGTTTAGATTTTATGG 59.514 40.000 0.00 0.00 0.00 2.74
619 959 4.678423 GGGTAATGGCCCTTGTCC 57.322 61.111 0.00 4.30 45.22 4.02
620 960 1.453197 GGGTAATGGCCCTTGTCCG 60.453 63.158 0.00 0.00 45.22 4.79
639 981 1.378531 GTGTGCTGTTGAGTTGGACA 58.621 50.000 0.00 0.00 0.00 4.02
707 1049 1.112113 GCCACTAGGTACTGCAGCTA 58.888 55.000 15.27 6.50 41.52 3.32
847 1214 0.034089 AGCCCAGCCCAGTGTAATTC 60.034 55.000 0.00 0.00 0.00 2.17
855 1222 5.338871 CCAGCCCAGTGTAATTCCTTAGTTA 60.339 44.000 0.00 0.00 0.00 2.24
985 1358 4.576053 TGGTAAATCCGCTGAATTGATCTG 59.424 41.667 0.00 0.00 39.52 2.90
1369 1743 3.659092 TTTTCAGGCTGCGTGCGG 61.659 61.111 16.90 0.00 44.05 5.69
1477 1853 7.373617 TGCTCCATTAGTTTGATATACTCCA 57.626 36.000 0.00 0.00 0.00 3.86
1481 1857 8.504811 TCCATTAGTTTGATATACTCCATCCA 57.495 34.615 0.00 0.00 0.00 3.41
1543 1919 7.167468 GCTTGCAAAAACGTCTTATATTATGGG 59.833 37.037 0.00 0.00 0.00 4.00
1544 1920 7.867305 TGCAAAAACGTCTTATATTATGGGA 57.133 32.000 0.00 0.00 0.00 4.37
1545 1921 7.699566 TGCAAAAACGTCTTATATTATGGGAC 58.300 34.615 0.00 0.00 0.00 4.46
1992 2435 4.276678 CACACTGGCAACTTATATGATGGG 59.723 45.833 0.00 0.00 37.61 4.00
2157 2918 2.347731 GCAGGGAGCAACTGTAACTAC 58.652 52.381 4.59 0.00 44.79 2.73
2238 3117 9.729023 CTAGAAGAATGCAGATATACTATTCCG 57.271 37.037 0.00 0.00 28.91 4.30
2270 3149 7.289310 TGAGAATTTCTGTAATGGATGCCATA 58.711 34.615 3.03 0.00 44.40 2.74
2590 3545 1.255882 GGCATGTTGGGAATGTGTCA 58.744 50.000 0.00 0.00 0.00 3.58
2591 3546 1.067635 GGCATGTTGGGAATGTGTCAC 60.068 52.381 0.00 0.00 0.00 3.67
2592 3547 1.612950 GCATGTTGGGAATGTGTCACA 59.387 47.619 8.40 8.40 38.13 3.58
2593 3548 2.231964 GCATGTTGGGAATGTGTCACAT 59.768 45.455 12.87 12.87 40.19 3.21
2632 3594 4.637977 TGCCGTGCATAGTTAATCAATCAA 59.362 37.500 0.00 0.00 31.71 2.57
2795 3767 9.907229 AACAGGGATAAAGATAACTTTCCTTAG 57.093 33.333 0.66 0.00 44.02 2.18
2904 6353 5.931441 AGAATCGCCTGCTATATTTGTTC 57.069 39.130 0.00 0.00 0.00 3.18
3231 6692 5.371629 GTTCTGTACATTTAAGCGTGTGAC 58.628 41.667 0.00 0.00 0.00 3.67
3255 6716 7.556844 ACGAACCTGATGATAATTACTCACTT 58.443 34.615 0.00 0.00 0.00 3.16
3257 6718 9.698309 CGAACCTGATGATAATTACTCACTTAT 57.302 33.333 0.00 0.00 0.00 1.73
3289 6750 5.819991 AGAAAGGATCTTGGCTATGAACAA 58.180 37.500 0.00 0.00 33.39 2.83
3334 6795 6.349426 CAGCAAATTGAATGAAACTTTCGTG 58.651 36.000 0.00 0.00 0.00 4.35
3349 6810 5.202640 ACTTTCGTGCGAAGTAAACATTTC 58.797 37.500 7.10 0.00 35.38 2.17
3493 6985 1.747355 CCTATCAAGGCCAAGTTGCTG 59.253 52.381 5.01 0.00 35.64 4.41
3685 7193 5.826643 TCAGAACCAGCCTTATTACCAATT 58.173 37.500 0.00 0.00 0.00 2.32
3705 7213 5.616488 ATTGTTTACAATGTGGTCGTACC 57.384 39.130 7.28 0.00 44.22 3.34
3788 7318 2.595386 GTGCTAAGCATTTGGTTTCCG 58.405 47.619 0.00 0.00 41.91 4.30
3833 7366 4.359434 TGTAACAACAATACTGCCTGGA 57.641 40.909 0.00 0.00 0.00 3.86
4086 7632 6.423604 GTGATTTTACTTCCACCCATTGTTTG 59.576 38.462 0.00 0.00 0.00 2.93
4101 7650 6.294453 CCCATTGTTTGTACATGAGCTTACAA 60.294 38.462 0.00 4.90 36.60 2.41
4114 7663 1.400242 GCTTACAACCAGAAGCAAGCG 60.400 52.381 1.86 0.00 45.99 4.68
4164 7713 7.904205 AGTAGTACATGTTGCCTAAAGTAACT 58.096 34.615 2.30 0.00 41.29 2.24
4219 7773 4.450419 CCTGCTGTTAGACTTGAGTTGAAG 59.550 45.833 0.00 0.00 0.00 3.02
4271 7825 2.413837 CCCCGAAACTCTGTACAGTTG 58.586 52.381 21.99 17.41 36.69 3.16
4273 7827 3.463944 CCCGAAACTCTGTACAGTTGTT 58.536 45.455 21.99 21.97 36.69 2.83
4283 7837 7.940850 ACTCTGTACAGTTGTTATGCATTTTT 58.059 30.769 21.99 0.00 0.00 1.94
4328 7885 6.952358 GGACATATACTACATTACTCCCTCCA 59.048 42.308 0.00 0.00 0.00 3.86
4344 7901 6.160459 ACTCCCTCCAATCCATATTACTTGTT 59.840 38.462 0.00 0.00 0.00 2.83
4369 7926 9.667107 TTGCTGCTTATATTATGGGAGTATTAC 57.333 33.333 0.00 0.00 0.00 1.89
4473 9706 9.961265 CGATGAGGTGTACAACTATATTCTAAA 57.039 33.333 14.83 0.00 0.00 1.85
4511 10156 4.864334 CCTCACCCGGCTGATGGC 62.864 72.222 0.00 0.00 40.90 4.40
4539 10184 1.367840 GTCAACCGCCTCTGTGACT 59.632 57.895 0.00 0.00 0.00 3.41
4541 10186 2.031163 AACCGCCTCTGTGACTGC 59.969 61.111 0.00 0.00 0.00 4.40
4542 10187 3.537206 AACCGCCTCTGTGACTGCC 62.537 63.158 0.00 0.00 0.00 4.85
4548 10193 1.326213 CCTCTGTGACTGCCCGATCT 61.326 60.000 0.00 0.00 0.00 2.75
4551 10196 0.463204 CTGTGACTGCCCGATCTGAT 59.537 55.000 0.00 0.00 0.00 2.90
4552 10197 0.904649 TGTGACTGCCCGATCTGATT 59.095 50.000 0.00 0.00 0.00 2.57
4586 10231 2.031157 GCACACAACAATCCTACCACAC 60.031 50.000 0.00 0.00 0.00 3.82
4592 10237 5.691305 CACAACAATCCTACCACACAAATTG 59.309 40.000 0.00 0.00 0.00 2.32
4609 10254 5.877031 CAAATTGGTTTTGCAACATTGTCA 58.123 33.333 0.00 0.00 38.42 3.58
4624 10269 0.602638 TGTCATCGTTGCAGGACACC 60.603 55.000 0.00 0.00 35.51 4.16
4626 10271 1.302431 CATCGTTGCAGGACACCCA 60.302 57.895 0.00 0.00 33.88 4.51
4628 10273 0.179004 ATCGTTGCAGGACACCCAAA 60.179 50.000 0.00 0.00 33.88 3.28
4629 10274 0.179004 TCGTTGCAGGACACCCAAAT 60.179 50.000 0.00 0.00 33.88 2.32
4637 10282 1.460273 GGACACCCAAATGCAACCGT 61.460 55.000 0.00 0.00 0.00 4.83
4638 10283 1.240256 GACACCCAAATGCAACCGTA 58.760 50.000 0.00 0.00 0.00 4.02
4639 10284 1.199097 GACACCCAAATGCAACCGTAG 59.801 52.381 0.00 0.00 0.00 3.51
4640 10285 1.243902 CACCCAAATGCAACCGTAGT 58.756 50.000 0.00 0.00 0.00 2.73
4641 10286 1.199097 CACCCAAATGCAACCGTAGTC 59.801 52.381 0.00 0.00 0.00 2.59
4642 10287 0.808755 CCCAAATGCAACCGTAGTCC 59.191 55.000 0.00 0.00 0.00 3.85
4643 10288 0.808755 CCAAATGCAACCGTAGTCCC 59.191 55.000 0.00 0.00 0.00 4.46
4644 10289 1.529226 CAAATGCAACCGTAGTCCCA 58.471 50.000 0.00 0.00 0.00 4.37
4645 10290 1.199097 CAAATGCAACCGTAGTCCCAC 59.801 52.381 0.00 0.00 0.00 4.61
4646 10291 0.690762 AATGCAACCGTAGTCCCACT 59.309 50.000 0.00 0.00 0.00 4.00
4647 10292 0.690762 ATGCAACCGTAGTCCCACTT 59.309 50.000 0.00 0.00 0.00 3.16
4648 10293 1.340088 TGCAACCGTAGTCCCACTTA 58.660 50.000 0.00 0.00 0.00 2.24
4649 10294 1.693062 TGCAACCGTAGTCCCACTTAA 59.307 47.619 0.00 0.00 0.00 1.85
4650 10295 2.104451 TGCAACCGTAGTCCCACTTAAA 59.896 45.455 0.00 0.00 0.00 1.52
4651 10296 3.244630 TGCAACCGTAGTCCCACTTAAAT 60.245 43.478 0.00 0.00 0.00 1.40
4652 10297 3.754850 GCAACCGTAGTCCCACTTAAATT 59.245 43.478 0.00 0.00 0.00 1.82
4653 10298 4.937015 GCAACCGTAGTCCCACTTAAATTA 59.063 41.667 0.00 0.00 0.00 1.40
4654 10299 5.163824 GCAACCGTAGTCCCACTTAAATTAC 60.164 44.000 0.00 0.00 0.00 1.89
4655 10300 6.168389 CAACCGTAGTCCCACTTAAATTACT 58.832 40.000 0.00 0.00 0.00 2.24
4656 10301 6.364568 ACCGTAGTCCCACTTAAATTACTT 57.635 37.500 0.00 0.00 0.00 2.24
4657 10302 6.772605 ACCGTAGTCCCACTTAAATTACTTT 58.227 36.000 0.00 0.00 0.00 2.66
4658 10303 7.906327 ACCGTAGTCCCACTTAAATTACTTTA 58.094 34.615 0.00 0.00 0.00 1.85
4659 10304 8.374743 ACCGTAGTCCCACTTAAATTACTTTAA 58.625 33.333 0.00 0.00 35.89 1.52
4660 10305 9.387257 CCGTAGTCCCACTTAAATTACTTTAAT 57.613 33.333 0.00 0.00 36.49 1.40
4663 10308 8.589701 AGTCCCACTTAAATTACTTTAATGGG 57.410 34.615 22.87 22.87 44.61 4.00
4664 10309 7.123697 AGTCCCACTTAAATTACTTTAATGGGC 59.876 37.037 23.41 20.28 43.99 5.36
4665 10310 7.123697 GTCCCACTTAAATTACTTTAATGGGCT 59.876 37.037 23.41 0.99 43.99 5.19
4666 10311 7.340999 TCCCACTTAAATTACTTTAATGGGCTC 59.659 37.037 23.41 0.00 43.99 4.70
4667 10312 7.417456 CCCACTTAAATTACTTTAATGGGCTCC 60.417 40.741 20.23 0.00 41.81 4.70
4668 10313 7.417456 CCACTTAAATTACTTTAATGGGCTCCC 60.417 40.741 0.00 0.00 36.49 4.30
4677 10322 2.354729 TGGGCTCCCATTGAACCG 59.645 61.111 2.93 0.00 41.89 4.44
4678 10323 2.440247 GGGCTCCCATTGAACCGG 60.440 66.667 0.00 0.00 35.81 5.28
4679 10324 2.674754 GGCTCCCATTGAACCGGA 59.325 61.111 9.46 0.00 0.00 5.14
4680 10325 1.001393 GGCTCCCATTGAACCGGAA 60.001 57.895 9.46 0.00 0.00 4.30
4681 10326 0.610785 GGCTCCCATTGAACCGGAAA 60.611 55.000 9.46 0.00 0.00 3.13
4682 10327 1.474330 GCTCCCATTGAACCGGAAAT 58.526 50.000 9.46 1.70 0.00 2.17
4683 10328 2.650322 GCTCCCATTGAACCGGAAATA 58.350 47.619 9.46 0.00 0.00 1.40
4684 10329 3.020984 GCTCCCATTGAACCGGAAATAA 58.979 45.455 9.46 0.00 0.00 1.40
4685 10330 3.445805 GCTCCCATTGAACCGGAAATAAA 59.554 43.478 9.46 0.00 0.00 1.40
4686 10331 4.099419 GCTCCCATTGAACCGGAAATAAAT 59.901 41.667 9.46 0.00 0.00 1.40
4687 10332 5.395214 GCTCCCATTGAACCGGAAATAAATT 60.395 40.000 9.46 0.00 0.00 1.82
4688 10333 6.183360 GCTCCCATTGAACCGGAAATAAATTA 60.183 38.462 9.46 0.00 0.00 1.40
4689 10334 7.631811 GCTCCCATTGAACCGGAAATAAATTAA 60.632 37.037 9.46 0.00 0.00 1.40
4690 10335 8.135382 TCCCATTGAACCGGAAATAAATTAAA 57.865 30.769 9.46 0.00 0.00 1.52
4691 10336 8.035984 TCCCATTGAACCGGAAATAAATTAAAC 58.964 33.333 9.46 0.00 0.00 2.01
4692 10337 7.009723 CCCATTGAACCGGAAATAAATTAAACG 59.990 37.037 9.46 0.00 0.00 3.60
4693 10338 7.009723 CCATTGAACCGGAAATAAATTAAACGG 59.990 37.037 9.46 0.00 44.86 4.44
4694 10339 5.952033 TGAACCGGAAATAAATTAAACGGG 58.048 37.500 9.46 0.00 43.73 5.28
4695 10340 4.374843 ACCGGAAATAAATTAAACGGGC 57.625 40.909 9.46 0.00 43.73 6.13
4696 10341 4.018490 ACCGGAAATAAATTAAACGGGCT 58.982 39.130 9.46 0.00 43.73 5.19
4697 10342 5.192176 ACCGGAAATAAATTAAACGGGCTA 58.808 37.500 9.46 0.00 43.73 3.93
4698 10343 5.829391 ACCGGAAATAAATTAAACGGGCTAT 59.171 36.000 9.46 0.00 43.73 2.97
4699 10344 6.016860 ACCGGAAATAAATTAAACGGGCTATC 60.017 38.462 9.46 0.00 43.73 2.08
4700 10345 6.376177 CGGAAATAAATTAAACGGGCTATCC 58.624 40.000 0.00 0.00 0.00 2.59
4714 10359 3.690460 GGCTATCCCACTTATCCCATTG 58.310 50.000 0.00 0.00 0.00 2.82
4715 10360 3.562176 GGCTATCCCACTTATCCCATTGG 60.562 52.174 0.00 0.00 0.00 3.16
4732 10377 3.483587 GGAACCCACCTCAGCTCA 58.516 61.111 0.00 0.00 0.00 4.26
4733 10378 1.003233 GGAACCCACCTCAGCTCAC 60.003 63.158 0.00 0.00 0.00 3.51
4734 10379 1.003233 GAACCCACCTCAGCTCACC 60.003 63.158 0.00 0.00 0.00 4.02
4735 10380 1.768684 GAACCCACCTCAGCTCACCA 61.769 60.000 0.00 0.00 0.00 4.17
4736 10381 1.772819 AACCCACCTCAGCTCACCAG 61.773 60.000 0.00 0.00 0.00 4.00
4745 10390 2.125350 GCTCACCAGCTCCTTCCG 60.125 66.667 0.00 0.00 43.09 4.30
4746 10391 2.650116 GCTCACCAGCTCCTTCCGA 61.650 63.158 0.00 0.00 43.09 4.55
4747 10392 1.965754 GCTCACCAGCTCCTTCCGAT 61.966 60.000 0.00 0.00 43.09 4.18
4748 10393 1.403814 CTCACCAGCTCCTTCCGATA 58.596 55.000 0.00 0.00 0.00 2.92
4749 10394 1.339610 CTCACCAGCTCCTTCCGATAG 59.660 57.143 0.00 0.00 0.00 2.08
4777 10422 3.278574 CTGTAGACAGAGAGGTCAGAGG 58.721 54.545 3.45 0.00 46.59 3.69
4778 10423 2.913617 TGTAGACAGAGAGGTCAGAGGA 59.086 50.000 0.00 0.00 40.29 3.71
4779 10424 2.806945 AGACAGAGAGGTCAGAGGAG 57.193 55.000 0.00 0.00 40.29 3.69
4780 10425 1.284785 AGACAGAGAGGTCAGAGGAGG 59.715 57.143 0.00 0.00 40.29 4.30
4781 10426 0.324275 ACAGAGAGGTCAGAGGAGGC 60.324 60.000 0.00 0.00 0.00 4.70
4782 10427 1.077068 AGAGAGGTCAGAGGAGGCG 60.077 63.158 0.00 0.00 0.00 5.52
4783 10428 2.757917 AGAGGTCAGAGGAGGCGC 60.758 66.667 0.00 0.00 0.00 6.53
4784 10429 3.844090 GAGGTCAGAGGAGGCGCC 61.844 72.222 21.89 21.89 0.00 6.53
4787 10432 4.803426 GTCAGAGGAGGCGCCGTG 62.803 72.222 23.20 14.58 43.43 4.94
4819 10464 4.640855 CCGTGGCCGCGTATCGAT 62.641 66.667 34.58 2.16 41.67 3.59
4820 10465 3.394874 CGTGGCCGCGTATCGATG 61.395 66.667 30.21 0.00 41.67 3.84
4821 10466 3.702555 GTGGCCGCGTATCGATGC 61.703 66.667 8.54 5.66 41.67 3.91
4822 10467 4.214327 TGGCCGCGTATCGATGCA 62.214 61.111 14.06 0.00 41.67 3.96
4823 10468 3.702555 GGCCGCGTATCGATGCAC 61.703 66.667 14.06 2.74 41.67 4.57
4824 10469 4.046998 GCCGCGTATCGATGCACG 62.047 66.667 15.66 15.66 41.67 5.34
4828 10473 4.046998 CGTATCGATGCACGCCGC 62.047 66.667 14.06 0.00 42.26 6.53
4829 10474 2.658593 GTATCGATGCACGCCGCT 60.659 61.111 8.54 0.00 43.06 5.52
4830 10475 2.658268 TATCGATGCACGCCGCTG 60.658 61.111 8.54 0.00 43.06 5.18
4831 10476 3.132481 TATCGATGCACGCCGCTGA 62.132 57.895 8.54 0.00 43.06 4.26
4851 10496 4.047125 CACCCCCGCCTGTTCCAT 62.047 66.667 0.00 0.00 0.00 3.41
4852 10497 3.728373 ACCCCCGCCTGTTCCATC 61.728 66.667 0.00 0.00 0.00 3.51
4853 10498 3.411517 CCCCCGCCTGTTCCATCT 61.412 66.667 0.00 0.00 0.00 2.90
4854 10499 2.190578 CCCCGCCTGTTCCATCTC 59.809 66.667 0.00 0.00 0.00 2.75
4855 10500 2.202932 CCCGCCTGTTCCATCTCG 60.203 66.667 0.00 0.00 0.00 4.04
4856 10501 2.892425 CCGCCTGTTCCATCTCGC 60.892 66.667 0.00 0.00 0.00 5.03
4857 10502 2.125552 CGCCTGTTCCATCTCGCA 60.126 61.111 0.00 0.00 0.00 5.10
4858 10503 2.456119 CGCCTGTTCCATCTCGCAC 61.456 63.158 0.00 0.00 0.00 5.34
4859 10504 2.109126 GCCTGTTCCATCTCGCACC 61.109 63.158 0.00 0.00 0.00 5.01
4860 10505 1.599047 CCTGTTCCATCTCGCACCT 59.401 57.895 0.00 0.00 0.00 4.00
4861 10506 0.742281 CCTGTTCCATCTCGCACCTG 60.742 60.000 0.00 0.00 0.00 4.00
4862 10507 0.742281 CTGTTCCATCTCGCACCTGG 60.742 60.000 0.00 0.00 0.00 4.45
4863 10508 2.109126 GTTCCATCTCGCACCTGGC 61.109 63.158 0.00 0.00 39.90 4.85
4864 10509 3.329542 TTCCATCTCGCACCTGGCC 62.330 63.158 0.00 0.00 40.31 5.36
4865 10510 4.864334 CCATCTCGCACCTGGCCC 62.864 72.222 0.00 0.00 40.31 5.80
4866 10511 4.864334 CATCTCGCACCTGGCCCC 62.864 72.222 0.00 0.00 40.31 5.80
4869 10514 4.785453 CTCGCACCTGGCCCCTTC 62.785 72.222 0.00 0.00 40.31 3.46
4881 10526 4.162690 CCCTTCCCCGCCTCGAAG 62.163 72.222 0.00 0.00 36.13 3.79
4882 10527 4.840005 CCTTCCCCGCCTCGAAGC 62.840 72.222 0.00 0.00 35.23 3.86
4883 10528 3.775654 CTTCCCCGCCTCGAAGCT 61.776 66.667 4.21 0.00 29.89 3.74
4884 10529 3.316573 CTTCCCCGCCTCGAAGCTT 62.317 63.158 0.00 0.00 29.89 3.74
4885 10530 3.310860 TTCCCCGCCTCGAAGCTTC 62.311 63.158 16.84 16.84 0.00 3.86
4886 10531 3.775654 CCCCGCCTCGAAGCTTCT 61.776 66.667 23.50 0.00 0.00 2.85
4887 10532 2.202810 CCCGCCTCGAAGCTTCTC 60.203 66.667 23.50 9.33 0.00 2.87
4888 10533 2.202810 CCGCCTCGAAGCTTCTCC 60.203 66.667 23.50 8.36 0.00 3.71
4889 10534 2.202810 CGCCTCGAAGCTTCTCCC 60.203 66.667 23.50 8.68 0.00 4.30
4890 10535 2.716017 CGCCTCGAAGCTTCTCCCT 61.716 63.158 23.50 0.00 0.00 4.20
4891 10536 1.599576 GCCTCGAAGCTTCTCCCTT 59.400 57.895 23.50 0.00 0.00 3.95
4892 10537 0.461163 GCCTCGAAGCTTCTCCCTTC 60.461 60.000 23.50 4.96 36.27 3.46
4893 10538 0.176910 CCTCGAAGCTTCTCCCTTCC 59.823 60.000 23.50 0.00 36.26 3.46
4894 10539 0.176910 CTCGAAGCTTCTCCCTTCCC 59.823 60.000 23.50 0.00 36.26 3.97
4895 10540 1.153549 CGAAGCTTCTCCCTTCCCG 60.154 63.158 23.50 4.49 36.26 5.14
4896 10541 1.222113 GAAGCTTCTCCCTTCCCGG 59.778 63.158 19.44 0.00 34.12 5.73
4897 10542 1.539124 AAGCTTCTCCCTTCCCGGT 60.539 57.895 0.00 0.00 0.00 5.28
4898 10543 1.554583 AAGCTTCTCCCTTCCCGGTC 61.555 60.000 0.00 0.00 0.00 4.79
4899 10544 2.893398 CTTCTCCCTTCCCGGTCG 59.107 66.667 0.00 0.00 0.00 4.79
4900 10545 3.372554 CTTCTCCCTTCCCGGTCGC 62.373 68.421 0.00 0.00 0.00 5.19
4924 10569 3.928343 CGGAAGCTACTCCTCGAAG 57.072 57.895 2.99 0.00 32.82 3.79
4925 10570 0.248702 CGGAAGCTACTCCTCGAAGC 60.249 60.000 2.99 0.00 36.48 3.86
4929 10574 1.107945 AGCTACTCCTCGAAGCTTCC 58.892 55.000 20.62 3.29 43.97 3.46
4930 10575 0.103390 GCTACTCCTCGAAGCTTCCC 59.897 60.000 20.62 0.00 33.40 3.97
4931 10576 1.770294 CTACTCCTCGAAGCTTCCCT 58.230 55.000 20.62 0.00 0.00 4.20
4932 10577 1.407258 CTACTCCTCGAAGCTTCCCTG 59.593 57.143 20.62 10.40 0.00 4.45
4933 10578 1.153469 CTCCTCGAAGCTTCCCTGC 60.153 63.158 20.62 0.00 0.00 4.85
4934 10579 1.610673 TCCTCGAAGCTTCCCTGCT 60.611 57.895 20.62 0.00 46.40 4.24
4935 10580 1.153469 CCTCGAAGCTTCCCTGCTC 60.153 63.158 20.62 0.00 43.24 4.26
4936 10581 1.612395 CCTCGAAGCTTCCCTGCTCT 61.612 60.000 20.62 0.00 43.24 4.09
4937 10582 0.459934 CTCGAAGCTTCCCTGCTCTG 60.460 60.000 20.62 4.22 43.24 3.35
4938 10583 1.449246 CGAAGCTTCCCTGCTCTGG 60.449 63.158 20.62 0.00 43.24 3.86
4939 10584 1.892819 CGAAGCTTCCCTGCTCTGGA 61.893 60.000 20.62 0.00 43.24 3.86
4940 10585 0.545646 GAAGCTTCCCTGCTCTGGAT 59.454 55.000 15.97 0.00 43.24 3.41
4941 10586 0.998145 AAGCTTCCCTGCTCTGGATT 59.002 50.000 0.00 0.00 43.24 3.01
4942 10587 0.255318 AGCTTCCCTGCTCTGGATTG 59.745 55.000 0.00 0.00 39.34 2.67
4943 10588 1.382692 GCTTCCCTGCTCTGGATTGC 61.383 60.000 0.00 0.00 0.00 3.56
4944 10589 0.034767 CTTCCCTGCTCTGGATTGCA 60.035 55.000 0.00 0.00 37.63 4.08
4945 10590 0.322816 TTCCCTGCTCTGGATTGCAC 60.323 55.000 0.00 0.00 35.20 4.57
4946 10591 1.203441 TCCCTGCTCTGGATTGCACT 61.203 55.000 0.00 0.00 35.20 4.40
4947 10592 0.323178 CCCTGCTCTGGATTGCACTT 60.323 55.000 0.00 0.00 35.20 3.16
4948 10593 0.809385 CCTGCTCTGGATTGCACTTG 59.191 55.000 0.00 0.00 35.20 3.16
4949 10594 0.170561 CTGCTCTGGATTGCACTTGC 59.829 55.000 0.00 0.00 42.50 4.01
4950 10595 0.251033 TGCTCTGGATTGCACTTGCT 60.251 50.000 2.33 0.00 42.66 3.91
4951 10596 1.003464 TGCTCTGGATTGCACTTGCTA 59.997 47.619 2.33 0.00 42.66 3.49
4952 10597 2.086869 GCTCTGGATTGCACTTGCTAA 58.913 47.619 2.33 0.00 42.66 3.09
4953 10598 2.686915 GCTCTGGATTGCACTTGCTAAT 59.313 45.455 2.33 1.19 42.66 1.73
4954 10599 3.243002 GCTCTGGATTGCACTTGCTAATC 60.243 47.826 13.54 13.54 42.66 1.75
4955 10600 4.197750 CTCTGGATTGCACTTGCTAATCT 58.802 43.478 17.90 0.00 42.66 2.40
4956 10601 4.592942 TCTGGATTGCACTTGCTAATCTT 58.407 39.130 17.90 0.00 42.66 2.40
4957 10602 4.397103 TCTGGATTGCACTTGCTAATCTTG 59.603 41.667 17.90 13.49 42.66 3.02
4958 10603 3.444742 TGGATTGCACTTGCTAATCTTGG 59.555 43.478 17.90 0.00 42.66 3.61
4959 10604 3.442100 GATTGCACTTGCTAATCTTGGC 58.558 45.455 14.18 0.00 42.66 4.52
4960 10605 1.176527 TGCACTTGCTAATCTTGGCC 58.823 50.000 0.00 0.00 42.66 5.36
4961 10606 1.272092 TGCACTTGCTAATCTTGGCCT 60.272 47.619 3.32 0.00 42.66 5.19
4962 10607 1.403323 GCACTTGCTAATCTTGGCCTC 59.597 52.381 3.32 0.00 38.21 4.70
4963 10608 2.019984 CACTTGCTAATCTTGGCCTCC 58.980 52.381 3.32 0.00 33.25 4.30
4964 10609 1.918957 ACTTGCTAATCTTGGCCTCCT 59.081 47.619 3.32 0.00 33.25 3.69
4965 10610 3.115390 ACTTGCTAATCTTGGCCTCCTA 58.885 45.455 3.32 0.00 33.25 2.94
4966 10611 3.718956 ACTTGCTAATCTTGGCCTCCTAT 59.281 43.478 3.32 0.00 33.25 2.57
4967 10612 4.202409 ACTTGCTAATCTTGGCCTCCTATC 60.202 45.833 3.32 0.00 33.25 2.08
4968 10613 3.591789 TGCTAATCTTGGCCTCCTATCT 58.408 45.455 3.32 0.00 33.25 1.98
4969 10614 3.976654 TGCTAATCTTGGCCTCCTATCTT 59.023 43.478 3.32 0.00 33.25 2.40
4970 10615 4.202398 TGCTAATCTTGGCCTCCTATCTTG 60.202 45.833 3.32 0.00 33.25 3.02
4971 10616 3.872459 AATCTTGGCCTCCTATCTTGG 57.128 47.619 3.32 0.00 0.00 3.61
4972 10617 2.270434 TCTTGGCCTCCTATCTTGGT 57.730 50.000 3.32 0.00 0.00 3.67
4973 10618 1.839994 TCTTGGCCTCCTATCTTGGTG 59.160 52.381 3.32 0.00 0.00 4.17
4974 10619 1.561542 CTTGGCCTCCTATCTTGGTGT 59.438 52.381 3.32 0.00 0.00 4.16
4975 10620 1.204146 TGGCCTCCTATCTTGGTGTC 58.796 55.000 3.32 0.00 0.00 3.67
4976 10621 1.204146 GGCCTCCTATCTTGGTGTCA 58.796 55.000 0.00 0.00 0.00 3.58
4977 10622 1.139853 GGCCTCCTATCTTGGTGTCAG 59.860 57.143 0.00 0.00 0.00 3.51
4978 10623 1.834263 GCCTCCTATCTTGGTGTCAGT 59.166 52.381 0.00 0.00 0.00 3.41
4979 10624 2.159028 GCCTCCTATCTTGGTGTCAGTC 60.159 54.545 0.00 0.00 0.00 3.51
4980 10625 3.370104 CCTCCTATCTTGGTGTCAGTCT 58.630 50.000 0.00 0.00 0.00 3.24
4981 10626 3.131933 CCTCCTATCTTGGTGTCAGTCTG 59.868 52.174 0.00 0.00 0.00 3.51
4982 10627 3.766591 CTCCTATCTTGGTGTCAGTCTGT 59.233 47.826 0.00 0.00 0.00 3.41
4983 10628 3.764434 TCCTATCTTGGTGTCAGTCTGTC 59.236 47.826 0.00 0.00 0.00 3.51
4984 10629 3.511540 CCTATCTTGGTGTCAGTCTGTCA 59.488 47.826 0.00 0.00 0.00 3.58
4985 10630 3.674528 ATCTTGGTGTCAGTCTGTCAG 57.325 47.619 0.00 0.00 0.00 3.51
4986 10631 1.069204 TCTTGGTGTCAGTCTGTCAGC 59.931 52.381 18.56 18.56 35.18 4.26
4987 10632 0.829990 TTGGTGTCAGTCTGTCAGCA 59.170 50.000 22.50 22.50 40.81 4.41
4988 10633 1.051008 TGGTGTCAGTCTGTCAGCAT 58.949 50.000 22.50 0.00 38.54 3.79
4989 10634 1.417517 TGGTGTCAGTCTGTCAGCATT 59.582 47.619 22.50 0.00 38.54 3.56
4990 10635 1.802960 GGTGTCAGTCTGTCAGCATTG 59.197 52.381 19.90 0.00 34.84 2.82
4991 10636 2.548707 GGTGTCAGTCTGTCAGCATTGA 60.549 50.000 19.90 0.00 34.84 2.57
4992 10637 3.133691 GTGTCAGTCTGTCAGCATTGAA 58.866 45.455 0.00 0.00 34.49 2.69
4993 10638 3.059325 GTGTCAGTCTGTCAGCATTGAAC 60.059 47.826 0.00 0.00 34.49 3.18
4994 10639 2.481952 GTCAGTCTGTCAGCATTGAACC 59.518 50.000 0.00 0.00 34.49 3.62
4995 10640 2.369860 TCAGTCTGTCAGCATTGAACCT 59.630 45.455 0.00 0.00 34.49 3.50
4996 10641 2.740981 CAGTCTGTCAGCATTGAACCTC 59.259 50.000 0.00 0.00 34.49 3.85
4997 10642 2.636893 AGTCTGTCAGCATTGAACCTCT 59.363 45.455 0.00 0.00 34.49 3.69
4998 10643 2.740981 GTCTGTCAGCATTGAACCTCTG 59.259 50.000 0.00 0.00 34.49 3.35
4999 10644 1.467734 CTGTCAGCATTGAACCTCTGC 59.532 52.381 0.00 0.00 34.49 4.26
5000 10645 1.202794 TGTCAGCATTGAACCTCTGCA 60.203 47.619 0.00 0.00 38.37 4.41
5001 10646 2.089980 GTCAGCATTGAACCTCTGCAT 58.910 47.619 0.00 0.00 38.37 3.96
5002 10647 2.097142 GTCAGCATTGAACCTCTGCATC 59.903 50.000 0.00 0.00 38.37 3.91
5003 10648 2.089201 CAGCATTGAACCTCTGCATCA 58.911 47.619 0.00 0.00 38.37 3.07
5004 10649 2.089980 AGCATTGAACCTCTGCATCAC 58.910 47.619 0.00 0.00 38.37 3.06
5005 10650 1.814394 GCATTGAACCTCTGCATCACA 59.186 47.619 0.00 0.00 35.96 3.58
5007 10652 1.527034 TTGAACCTCTGCATCACAGC 58.473 50.000 0.00 0.00 46.76 4.40
5008 10653 0.397564 TGAACCTCTGCATCACAGCA 59.602 50.000 0.00 0.00 46.76 4.41
5009 10654 1.003928 TGAACCTCTGCATCACAGCAT 59.996 47.619 0.00 0.00 46.76 3.79
5010 10655 1.400846 GAACCTCTGCATCACAGCATG 59.599 52.381 0.00 0.00 46.76 4.06
5023 10668 4.164252 GCATGCTGCTTGCTCAAC 57.836 55.556 27.19 4.21 40.96 3.18
5024 10669 1.445582 GCATGCTGCTTGCTCAACC 60.446 57.895 27.19 3.57 40.96 3.77
5025 10670 1.961378 CATGCTGCTTGCTCAACCA 59.039 52.632 0.00 0.00 43.37 3.67
5026 10671 0.315886 CATGCTGCTTGCTCAACCAA 59.684 50.000 0.00 0.00 43.37 3.67
5027 10672 1.042229 ATGCTGCTTGCTCAACCAAA 58.958 45.000 0.00 0.00 43.37 3.28
5028 10673 0.386476 TGCTGCTTGCTCAACCAAAG 59.614 50.000 0.00 0.00 43.37 2.77
5029 10674 0.319297 GCTGCTTGCTCAACCAAAGG 60.319 55.000 0.00 0.00 38.95 3.11
5030 10675 0.319297 CTGCTTGCTCAACCAAAGGC 60.319 55.000 0.00 0.00 0.00 4.35
5031 10676 1.042003 TGCTTGCTCAACCAAAGGCA 61.042 50.000 0.00 0.00 0.00 4.75
5032 10677 0.319297 GCTTGCTCAACCAAAGGCAG 60.319 55.000 0.00 0.00 36.06 4.85
5033 10678 1.035139 CTTGCTCAACCAAAGGCAGT 58.965 50.000 0.00 0.00 36.06 4.40
5034 10679 1.000938 CTTGCTCAACCAAAGGCAGTC 60.001 52.381 0.00 0.00 36.06 3.51
5035 10680 0.823356 TGCTCAACCAAAGGCAGTCC 60.823 55.000 0.00 0.00 0.00 3.85
5036 10681 0.823356 GCTCAACCAAAGGCAGTCCA 60.823 55.000 0.00 0.00 33.74 4.02
5037 10682 1.242076 CTCAACCAAAGGCAGTCCAG 58.758 55.000 0.00 0.00 33.74 3.86
5038 10683 0.178992 TCAACCAAAGGCAGTCCAGG 60.179 55.000 0.00 0.00 33.74 4.45
5039 10684 1.153756 AACCAAAGGCAGTCCAGGG 59.846 57.895 0.00 0.00 33.74 4.45
5040 10685 2.036256 CCAAAGGCAGTCCAGGGG 59.964 66.667 0.00 0.00 33.74 4.79
5041 10686 2.036256 CAAAGGCAGTCCAGGGGG 59.964 66.667 0.00 0.00 33.74 5.40
5042 10687 2.452491 AAAGGCAGTCCAGGGGGT 60.452 61.111 0.00 0.00 34.93 4.95
5043 10688 2.845345 AAAGGCAGTCCAGGGGGTG 61.845 63.158 0.00 0.00 34.93 4.61
5044 10689 3.810687 AAGGCAGTCCAGGGGGTGA 62.811 63.158 0.00 0.00 34.93 4.02
5045 10690 3.256960 GGCAGTCCAGGGGGTGAA 61.257 66.667 0.00 0.00 34.93 3.18
5046 10691 2.840753 GGCAGTCCAGGGGGTGAAA 61.841 63.158 0.00 0.00 34.93 2.69
5047 10692 1.603739 GCAGTCCAGGGGGTGAAAC 60.604 63.158 0.00 0.00 34.93 2.78
5048 10693 1.302511 CAGTCCAGGGGGTGAAACG 60.303 63.158 0.00 0.00 38.12 3.60
5063 10708 6.119144 GGTGAAACGCATTGTATCATTACT 57.881 37.500 0.00 0.00 38.12 2.24
5064 10709 6.192360 GGTGAAACGCATTGTATCATTACTC 58.808 40.000 0.00 0.00 38.12 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 5.627499 TGACAATTAAATGCAGACCTGAC 57.373 39.130 0.47 0.00 0.00 3.51
50 51 7.385752 ACAAAATGACAATTAAATGCAGACCTG 59.614 33.333 0.00 0.00 0.00 4.00
52 53 7.656707 ACAAAATGACAATTAAATGCAGACC 57.343 32.000 0.00 0.00 0.00 3.85
80 81 9.777297 AAAAATAACAACCAATGAAGTAGCATT 57.223 25.926 0.00 0.00 38.96 3.56
173 185 0.458669 TCTTCGGCGAGGTTATGTCC 59.541 55.000 18.75 0.00 0.00 4.02
192 204 1.604693 GCTGTTGCAAGCTGCTGATTT 60.605 47.619 1.35 0.00 45.31 2.17
214 226 2.598439 GCGTTGATTGATGTCGATGCTC 60.598 50.000 0.00 0.00 40.08 4.26
229 241 4.902443 TTAACAACCAATCAAGCGTTGA 57.098 36.364 6.19 3.69 45.01 3.18
230 242 4.085107 GCTTTAACAACCAATCAAGCGTTG 60.085 41.667 0.00 0.00 42.05 4.10
231 243 4.048504 GCTTTAACAACCAATCAAGCGTT 58.951 39.130 0.00 0.00 0.00 4.84
232 244 3.552068 GGCTTTAACAACCAATCAAGCGT 60.552 43.478 0.00 0.00 38.00 5.07
233 245 2.986479 GGCTTTAACAACCAATCAAGCG 59.014 45.455 0.00 0.00 38.00 4.68
234 246 3.740832 GTGGCTTTAACAACCAATCAAGC 59.259 43.478 0.00 0.00 34.63 4.01
235 247 4.942852 TGTGGCTTTAACAACCAATCAAG 58.057 39.130 0.00 0.00 34.63 3.02
236 248 4.646945 TCTGTGGCTTTAACAACCAATCAA 59.353 37.500 0.00 0.00 34.63 2.57
237 249 4.211125 TCTGTGGCTTTAACAACCAATCA 58.789 39.130 0.00 0.00 34.63 2.57
238 250 4.846779 TCTGTGGCTTTAACAACCAATC 57.153 40.909 0.00 0.00 34.63 2.67
239 251 5.128663 ACTTTCTGTGGCTTTAACAACCAAT 59.871 36.000 0.00 0.00 34.63 3.16
240 252 4.464597 ACTTTCTGTGGCTTTAACAACCAA 59.535 37.500 0.00 0.00 34.63 3.67
241 253 4.020543 ACTTTCTGTGGCTTTAACAACCA 58.979 39.130 0.00 0.00 0.00 3.67
242 254 4.649088 ACTTTCTGTGGCTTTAACAACC 57.351 40.909 0.00 0.00 0.00 3.77
243 255 5.515270 GTGAACTTTCTGTGGCTTTAACAAC 59.485 40.000 0.00 0.00 0.00 3.32
244 256 5.184096 TGTGAACTTTCTGTGGCTTTAACAA 59.816 36.000 0.00 0.00 0.00 2.83
245 257 4.702612 TGTGAACTTTCTGTGGCTTTAACA 59.297 37.500 0.00 0.00 0.00 2.41
246 258 5.243426 TGTGAACTTTCTGTGGCTTTAAC 57.757 39.130 0.00 0.00 0.00 2.01
247 259 4.202010 GCTGTGAACTTTCTGTGGCTTTAA 60.202 41.667 0.00 0.00 0.00 1.52
248 260 3.315191 GCTGTGAACTTTCTGTGGCTTTA 59.685 43.478 0.00 0.00 0.00 1.85
249 261 2.099756 GCTGTGAACTTTCTGTGGCTTT 59.900 45.455 0.00 0.00 0.00 3.51
250 262 1.678101 GCTGTGAACTTTCTGTGGCTT 59.322 47.619 0.00 0.00 0.00 4.35
251 263 1.312815 GCTGTGAACTTTCTGTGGCT 58.687 50.000 0.00 0.00 0.00 4.75
252 264 0.312102 GGCTGTGAACTTTCTGTGGC 59.688 55.000 0.00 0.00 0.00 5.01
253 265 1.679139 TGGCTGTGAACTTTCTGTGG 58.321 50.000 0.00 0.00 0.00 4.17
254 266 3.781079 TTTGGCTGTGAACTTTCTGTG 57.219 42.857 0.00 0.00 0.00 3.66
255 267 6.655078 AATATTTGGCTGTGAACTTTCTGT 57.345 33.333 0.00 0.00 0.00 3.41
256 268 9.474920 TTTTAATATTTGGCTGTGAACTTTCTG 57.525 29.630 0.00 0.00 0.00 3.02
293 305 2.288961 TTCTTCGGCGAGGTTATGTC 57.711 50.000 18.75 0.00 0.00 3.06
311 323 1.604693 GCTGTTGCAAGCTGCTGATTT 60.605 47.619 1.35 0.00 45.31 2.17
333 345 2.598439 GCGTTGATTGATGTCGATGCTC 60.598 50.000 0.00 0.00 40.08 4.26
335 347 1.328680 AGCGTTGATTGATGTCGATGC 59.671 47.619 0.00 1.04 42.41 3.91
336 348 3.062504 TCAAGCGTTGATTGATGTCGATG 59.937 43.478 0.00 0.00 32.88 3.84
417 430 2.618709 ACAAACAGCTTGTAGCACCTTC 59.381 45.455 1.09 0.00 46.75 3.46
530 585 1.134220 GTGGGGTCAGAGTCAAACACA 60.134 52.381 0.00 0.00 0.00 3.72
561 616 9.010029 TCTGTCTCCATAAAATCTAAACCAAAC 57.990 33.333 0.00 0.00 0.00 2.93
580 635 6.071165 ACCCAATCCAAAATCAAATCTGTCTC 60.071 38.462 0.00 0.00 0.00 3.36
619 959 0.304705 GTCCAACTCAACAGCACACG 59.695 55.000 0.00 0.00 0.00 4.49
620 960 1.378531 TGTCCAACTCAACAGCACAC 58.621 50.000 0.00 0.00 0.00 3.82
639 981 7.948034 TGGTTATCGAATTCCAATTTAGGTT 57.052 32.000 0.00 0.00 0.00 3.50
847 1214 7.390718 ACAAACCAGCAGTAAATCTAACTAAGG 59.609 37.037 0.00 0.00 0.00 2.69
855 1222 4.718961 ACTGACAAACCAGCAGTAAATCT 58.281 39.130 0.00 0.00 40.79 2.40
985 1358 7.210873 ACCTCGTCCATCTTTATTATCTGAAC 58.789 38.462 0.00 0.00 0.00 3.18
1346 1720 1.854126 CACGCAGCCTGAAAACAAAAG 59.146 47.619 0.00 0.00 0.00 2.27
1483 1859 9.520204 GCTTGCAACAATGTCTTATATTATTGT 57.480 29.630 0.00 0.00 43.40 2.71
1543 1919 7.093322 TCAGGTAATAAAGTACTTCTCCGTC 57.907 40.000 8.95 0.00 0.00 4.79
1544 1920 6.405619 GCTCAGGTAATAAAGTACTTCTCCGT 60.406 42.308 8.95 0.00 0.00 4.69
1545 1921 5.978322 GCTCAGGTAATAAAGTACTTCTCCG 59.022 44.000 8.95 4.89 0.00 4.63
1546 1922 6.875076 TGCTCAGGTAATAAAGTACTTCTCC 58.125 40.000 8.95 7.36 0.00 3.71
1548 1924 9.819267 GTATTGCTCAGGTAATAAAGTACTTCT 57.181 33.333 8.95 0.00 33.21 2.85
1740 2148 9.507329 AGATCACAAACACATTCTACAACTAAT 57.493 29.630 0.00 0.00 0.00 1.73
1992 2435 3.890756 TGGATGTCACCATGGCAAATATC 59.109 43.478 13.04 10.32 34.67 1.63
2101 2861 2.306805 TGACATTCATGGGAGTTCTGCT 59.693 45.455 0.00 0.00 0.00 4.24
2406 3357 0.318441 TTCCTCAAGCACAGGAGTCG 59.682 55.000 0.00 0.00 41.27 4.18
2475 3426 3.297620 CAACCACACCTGCCTGGC 61.298 66.667 12.87 12.87 40.22 4.85
2480 3431 0.250727 TAGAAGCCAACCACACCTGC 60.251 55.000 0.00 0.00 0.00 4.85
2590 3545 1.748122 GTGGCTGCTGCTGCTATGT 60.748 57.895 26.79 0.00 40.48 2.29
2591 3546 1.451567 AGTGGCTGCTGCTGCTATG 60.452 57.895 26.79 8.06 40.48 2.23
2592 3547 1.451567 CAGTGGCTGCTGCTGCTAT 60.452 57.895 26.79 13.00 40.48 2.97
2593 3548 2.046604 CAGTGGCTGCTGCTGCTA 60.047 61.111 26.79 20.56 40.48 3.49
2613 3575 9.823098 GAGATCATTGATTGATTAACTATGCAC 57.177 33.333 0.00 0.00 45.29 4.57
2632 3594 5.601729 TCTGCATAGAAAGAGGTGAGATCAT 59.398 40.000 0.00 0.00 0.00 2.45
2795 3767 7.202016 TCTTGACCACATTTCATAGTTCAAC 57.798 36.000 0.00 0.00 0.00 3.18
3231 6692 9.698309 ATAAGTGAGTAATTATCATCAGGTTCG 57.302 33.333 0.00 0.00 0.00 3.95
3255 6716 5.221722 CCAAGATCCTTTCTCGGGATGAATA 60.222 44.000 0.00 0.00 42.91 1.75
3257 6718 3.118261 CCAAGATCCTTTCTCGGGATGAA 60.118 47.826 0.00 0.00 42.91 2.57
3264 6725 4.327982 TCATAGCCAAGATCCTTTCTCG 57.672 45.455 0.00 0.00 31.78 4.04
3289 6750 4.081406 TGCACAAGCTAGTGATCCATTTT 58.919 39.130 0.00 0.00 42.05 1.82
3334 6795 4.213482 ACCAGACTGAAATGTTTACTTCGC 59.787 41.667 3.32 0.00 0.00 4.70
3349 6810 7.361201 CCATAACAGTAAATGAACACCAGACTG 60.361 40.741 0.00 0.00 38.68 3.51
3461 6953 3.889815 CCTTGATAGGTCTGGAAATGCA 58.110 45.455 0.00 0.00 36.74 3.96
3705 7213 0.790814 GAAAGGCCAGAACGAAGACG 59.209 55.000 5.01 0.00 45.75 4.18
3833 7366 7.716998 CAGATAATAGTTAGAAACTGGCATGGT 59.283 37.037 2.59 0.00 42.84 3.55
4039 7576 4.346418 ACAGTTCATCATAGATGGGAGGAC 59.654 45.833 7.11 0.64 0.00 3.85
4086 7632 4.093556 GCTTCTGGTTGTAAGCTCATGTAC 59.906 45.833 0.00 0.00 43.77 2.90
4101 7650 0.396811 AAGGTACGCTTGCTTCTGGT 59.603 50.000 0.00 0.00 0.00 4.00
4219 7773 3.871594 AGCAACATAAAGCATACTCCGAC 59.128 43.478 0.00 0.00 0.00 4.79
4253 7807 5.389516 GCATAACAACTGTACAGAGTTTCGG 60.390 44.000 29.25 22.29 33.75 4.30
4255 7809 6.539649 TGCATAACAACTGTACAGAGTTTC 57.460 37.500 29.25 21.84 33.75 2.78
4283 7837 7.733773 TGTCCCAGATAATGTAGAGAGAAAA 57.266 36.000 0.00 0.00 0.00 2.29
4299 7856 6.952358 GGGAGTAATGTAGTATATGTCCCAGA 59.048 42.308 13.39 0.00 40.84 3.86
4328 7885 6.780457 AAGCAGCAACAAGTAATATGGATT 57.220 33.333 0.00 0.00 0.00 3.01
4344 7901 9.046846 AGTAATACTCCCATAATATAAGCAGCA 57.953 33.333 0.00 0.00 0.00 4.41
4369 7926 6.852664 ACGAACTTTGCTTTTCCCATAATAG 58.147 36.000 0.00 0.00 0.00 1.73
4387 9614 9.817809 AACACTCATAATATATGTGAACGAACT 57.182 29.630 7.03 0.00 33.41 3.01
4473 9706 4.163649 AGGCTAAGCGTTTCCCTTACTATT 59.836 41.667 0.00 0.00 0.00 1.73
4474 9707 3.710165 AGGCTAAGCGTTTCCCTTACTAT 59.290 43.478 0.00 0.00 0.00 2.12
4476 9709 1.907255 AGGCTAAGCGTTTCCCTTACT 59.093 47.619 0.00 0.00 0.00 2.24
4477 9710 2.277969 GAGGCTAAGCGTTTCCCTTAC 58.722 52.381 5.77 0.00 0.00 2.34
4478 9711 1.903860 TGAGGCTAAGCGTTTCCCTTA 59.096 47.619 5.77 0.15 0.00 2.69
4548 10193 2.091541 GTGCCCCTCGATCAAAAATCA 58.908 47.619 0.00 0.00 0.00 2.57
4551 10196 1.243902 GTGTGCCCCTCGATCAAAAA 58.756 50.000 0.00 0.00 0.00 1.94
4552 10197 0.109532 TGTGTGCCCCTCGATCAAAA 59.890 50.000 0.00 0.00 0.00 2.44
4592 10237 3.380142 ACGATGACAATGTTGCAAAACC 58.620 40.909 0.00 0.00 0.00 3.27
4609 10254 0.179004 TTTGGGTGTCCTGCAACGAT 60.179 50.000 0.00 0.00 35.08 3.73
4618 10263 1.288752 CGGTTGCATTTGGGTGTCC 59.711 57.895 0.00 0.00 0.00 4.02
4624 10269 0.808755 GGGACTACGGTTGCATTTGG 59.191 55.000 0.00 0.00 0.00 3.28
4626 10271 1.073284 AGTGGGACTACGGTTGCATTT 59.927 47.619 0.00 0.00 0.00 2.32
4628 10273 0.690762 AAGTGGGACTACGGTTGCAT 59.309 50.000 0.00 0.00 0.00 3.96
4629 10274 1.340088 TAAGTGGGACTACGGTTGCA 58.660 50.000 0.00 0.00 0.00 4.08
4637 10282 9.689501 CCCATTAAAGTAATTTAAGTGGGACTA 57.310 33.333 28.90 5.63 41.45 2.59
4638 10283 7.123697 GCCCATTAAAGTAATTTAAGTGGGACT 59.876 37.037 32.47 11.96 41.45 3.85
4639 10284 7.123697 AGCCCATTAAAGTAATTTAAGTGGGAC 59.876 37.037 32.47 26.90 41.45 4.46
4640 10285 7.186268 AGCCCATTAAAGTAATTTAAGTGGGA 58.814 34.615 32.47 10.62 41.45 4.37
4641 10286 7.417456 GGAGCCCATTAAAGTAATTTAAGTGGG 60.417 40.741 28.69 28.69 41.61 4.61
4642 10287 7.417456 GGGAGCCCATTAAAGTAATTTAAGTGG 60.417 40.741 19.20 19.20 35.81 4.00
4643 10288 7.123547 TGGGAGCCCATTAAAGTAATTTAAGTG 59.876 37.037 12.98 10.75 41.89 3.16
4644 10289 7.186268 TGGGAGCCCATTAAAGTAATTTAAGT 58.814 34.615 12.98 0.86 41.89 2.24
4645 10290 7.654022 TGGGAGCCCATTAAAGTAATTTAAG 57.346 36.000 12.98 6.21 41.89 1.85
4661 10306 2.440247 CCGGTTCAATGGGAGCCC 60.440 66.667 0.00 0.00 43.54 5.19
4662 10307 0.610785 TTTCCGGTTCAATGGGAGCC 60.611 55.000 0.00 0.00 43.05 4.70
4663 10308 1.474330 ATTTCCGGTTCAATGGGAGC 58.526 50.000 0.00 0.00 0.00 4.70
4664 10309 5.852282 ATTTATTTCCGGTTCAATGGGAG 57.148 39.130 0.00 0.00 0.00 4.30
4665 10310 7.719871 TTAATTTATTTCCGGTTCAATGGGA 57.280 32.000 0.00 0.00 0.00 4.37
4666 10311 7.009723 CGTTTAATTTATTTCCGGTTCAATGGG 59.990 37.037 0.00 0.00 0.00 4.00
4667 10312 7.009723 CCGTTTAATTTATTTCCGGTTCAATGG 59.990 37.037 0.00 0.00 0.00 3.16
4668 10313 7.009723 CCCGTTTAATTTATTTCCGGTTCAATG 59.990 37.037 0.00 0.00 32.32 2.82
4669 10314 7.036829 CCCGTTTAATTTATTTCCGGTTCAAT 58.963 34.615 0.00 1.26 32.32 2.57
4670 10315 6.388278 CCCGTTTAATTTATTTCCGGTTCAA 58.612 36.000 0.00 0.00 32.32 2.69
4671 10316 5.621781 GCCCGTTTAATTTATTTCCGGTTCA 60.622 40.000 0.00 0.00 32.32 3.18
4672 10317 4.799949 GCCCGTTTAATTTATTTCCGGTTC 59.200 41.667 0.00 0.00 32.32 3.62
4673 10318 4.463539 AGCCCGTTTAATTTATTTCCGGTT 59.536 37.500 0.00 0.00 32.32 4.44
4674 10319 4.018490 AGCCCGTTTAATTTATTTCCGGT 58.982 39.130 0.00 0.00 32.32 5.28
4675 10320 4.642445 AGCCCGTTTAATTTATTTCCGG 57.358 40.909 0.00 0.00 0.00 5.14
4676 10321 6.376177 GGATAGCCCGTTTAATTTATTTCCG 58.624 40.000 0.00 0.00 0.00 4.30
4677 10322 6.684686 GGGATAGCCCGTTTAATTTATTTCC 58.315 40.000 0.00 0.00 46.48 3.13
4692 10337 6.645076 CCAATGGGATAAGTGGGATAGCCC 62.645 54.167 9.86 9.86 46.93 5.19
4693 10338 3.562176 CCAATGGGATAAGTGGGATAGCC 60.562 52.174 0.00 0.00 35.59 3.93
4694 10339 3.690460 CCAATGGGATAAGTGGGATAGC 58.310 50.000 0.00 0.00 35.59 2.97
4708 10353 1.000359 GAGGTGGGTTCCCAATGGG 60.000 63.158 13.28 13.28 46.11 4.00
4709 10354 0.323725 CTGAGGTGGGTTCCCAATGG 60.324 60.000 12.54 0.00 37.91 3.16
4710 10355 0.967380 GCTGAGGTGGGTTCCCAATG 60.967 60.000 12.54 2.94 37.91 2.82
4711 10356 1.142688 AGCTGAGGTGGGTTCCCAAT 61.143 55.000 12.54 4.39 37.91 3.16
4712 10357 1.774217 AGCTGAGGTGGGTTCCCAA 60.774 57.895 12.54 0.00 37.91 4.12
4713 10358 2.121963 AGCTGAGGTGGGTTCCCA 60.122 61.111 6.46 6.46 0.00 4.37
4714 10359 2.224159 TGAGCTGAGGTGGGTTCCC 61.224 63.158 0.00 0.12 0.00 3.97
4715 10360 1.003233 GTGAGCTGAGGTGGGTTCC 60.003 63.158 0.00 0.00 0.00 3.62
4716 10361 1.003233 GGTGAGCTGAGGTGGGTTC 60.003 63.158 0.00 0.00 0.00 3.62
4717 10362 1.770110 TGGTGAGCTGAGGTGGGTT 60.770 57.895 0.00 0.00 0.00 4.11
4718 10363 2.122413 TGGTGAGCTGAGGTGGGT 60.122 61.111 0.00 0.00 0.00 4.51
4719 10364 2.667418 CTGGTGAGCTGAGGTGGG 59.333 66.667 0.00 0.00 0.00 4.61
4720 10365 2.046507 GCTGGTGAGCTGAGGTGG 60.047 66.667 0.00 0.00 42.52 4.61
4728 10373 1.965754 ATCGGAAGGAGCTGGTGAGC 61.966 60.000 0.00 0.00 46.64 4.26
4729 10374 1.339610 CTATCGGAAGGAGCTGGTGAG 59.660 57.143 0.00 0.00 0.00 3.51
4730 10375 1.403814 CTATCGGAAGGAGCTGGTGA 58.596 55.000 0.00 0.00 0.00 4.02
4731 10376 0.390860 CCTATCGGAAGGAGCTGGTG 59.609 60.000 0.00 0.00 39.15 4.17
4732 10377 0.032017 ACCTATCGGAAGGAGCTGGT 60.032 55.000 10.49 0.00 39.15 4.00
4733 10378 1.123928 AACCTATCGGAAGGAGCTGG 58.876 55.000 10.49 0.00 39.15 4.85
4734 10379 2.432510 AGAAACCTATCGGAAGGAGCTG 59.567 50.000 10.49 0.00 39.15 4.24
4735 10380 2.696187 GAGAAACCTATCGGAAGGAGCT 59.304 50.000 10.49 0.00 39.15 4.09
4736 10381 2.696187 AGAGAAACCTATCGGAAGGAGC 59.304 50.000 10.49 0.80 39.15 4.70
4737 10382 3.702045 ACAGAGAAACCTATCGGAAGGAG 59.298 47.826 10.49 0.00 39.15 3.69
4738 10383 3.709587 ACAGAGAAACCTATCGGAAGGA 58.290 45.455 10.49 0.00 39.15 3.36
4739 10384 4.888239 TCTACAGAGAAACCTATCGGAAGG 59.112 45.833 2.77 2.77 42.82 3.46
4740 10385 5.357314 TGTCTACAGAGAAACCTATCGGAAG 59.643 44.000 0.00 0.00 31.96 3.46
4741 10386 5.258841 TGTCTACAGAGAAACCTATCGGAA 58.741 41.667 0.00 0.00 31.96 4.30
4742 10387 4.851843 TGTCTACAGAGAAACCTATCGGA 58.148 43.478 0.00 0.00 31.96 4.55
4743 10388 5.176407 CTGTCTACAGAGAAACCTATCGG 57.824 47.826 3.99 0.00 46.59 4.18
4756 10401 3.054728 TCCTCTGACCTCTCTGTCTACAG 60.055 52.174 3.64 3.64 45.08 2.74
4757 10402 2.913617 TCCTCTGACCTCTCTGTCTACA 59.086 50.000 0.00 0.00 36.21 2.74
4758 10403 3.541632 CTCCTCTGACCTCTCTGTCTAC 58.458 54.545 0.00 0.00 36.21 2.59
4759 10404 2.507886 CCTCCTCTGACCTCTCTGTCTA 59.492 54.545 0.00 0.00 36.21 2.59
4760 10405 1.284785 CCTCCTCTGACCTCTCTGTCT 59.715 57.143 0.00 0.00 36.21 3.41
4761 10406 1.762708 CCTCCTCTGACCTCTCTGTC 58.237 60.000 0.00 0.00 35.77 3.51
4762 10407 0.324275 GCCTCCTCTGACCTCTCTGT 60.324 60.000 0.00 0.00 0.00 3.41
4763 10408 1.383456 CGCCTCCTCTGACCTCTCTG 61.383 65.000 0.00 0.00 0.00 3.35
4764 10409 1.077068 CGCCTCCTCTGACCTCTCT 60.077 63.158 0.00 0.00 0.00 3.10
4765 10410 2.781158 GCGCCTCCTCTGACCTCTC 61.781 68.421 0.00 0.00 0.00 3.20
4766 10411 2.757917 GCGCCTCCTCTGACCTCT 60.758 66.667 0.00 0.00 0.00 3.69
4767 10412 3.844090 GGCGCCTCCTCTGACCTC 61.844 72.222 22.15 0.00 0.00 3.85
4770 10415 4.803426 CACGGCGCCTCCTCTGAC 62.803 72.222 26.68 0.00 0.00 3.51
4802 10447 4.640855 ATCGATACGCGGCCACGG 62.641 66.667 18.84 0.00 41.36 4.94
4803 10448 3.394874 CATCGATACGCGGCCACG 61.395 66.667 12.53 12.53 44.63 4.94
4804 10449 3.702555 GCATCGATACGCGGCCAC 61.703 66.667 12.47 0.00 41.33 5.01
4805 10450 4.214327 TGCATCGATACGCGGCCA 62.214 61.111 12.47 0.00 41.33 5.36
4806 10451 3.702555 GTGCATCGATACGCGGCC 61.703 66.667 12.47 0.00 41.33 6.13
4807 10452 4.046998 CGTGCATCGATACGCGGC 62.047 66.667 21.11 10.31 42.86 6.53
4811 10456 4.046998 GCGGCGTGCATCGATACG 62.047 66.667 14.83 14.83 45.45 3.06
4845 10490 2.109126 GCCAGGTGCGAGATGGAAC 61.109 63.158 1.61 0.00 36.09 3.62
4846 10491 2.268920 GCCAGGTGCGAGATGGAA 59.731 61.111 1.61 0.00 36.09 3.53
4847 10492 3.785859 GGCCAGGTGCGAGATGGA 61.786 66.667 0.00 0.00 42.61 3.41
4848 10493 4.864334 GGGCCAGGTGCGAGATGG 62.864 72.222 4.39 0.00 42.61 3.51
4849 10494 4.864334 GGGGCCAGGTGCGAGATG 62.864 72.222 4.39 0.00 42.61 2.90
4852 10497 4.785453 GAAGGGGCCAGGTGCGAG 62.785 72.222 4.39 0.00 42.61 5.03
4864 10509 4.162690 CTTCGAGGCGGGGAAGGG 62.163 72.222 7.16 0.00 36.78 3.95
4865 10510 4.840005 GCTTCGAGGCGGGGAAGG 62.840 72.222 2.91 1.22 39.96 3.46
4866 10511 3.316573 AAGCTTCGAGGCGGGGAAG 62.317 63.158 14.34 9.79 41.96 3.46
4867 10512 3.310860 GAAGCTTCGAGGCGGGGAA 62.311 63.158 14.34 0.00 37.29 3.97
4868 10513 3.771160 GAAGCTTCGAGGCGGGGA 61.771 66.667 14.34 0.00 37.29 4.81
4869 10514 3.724914 GAGAAGCTTCGAGGCGGGG 62.725 68.421 20.43 0.00 37.29 5.73
4870 10515 2.202810 GAGAAGCTTCGAGGCGGG 60.203 66.667 20.43 0.00 37.29 6.13
4871 10516 2.202810 GGAGAAGCTTCGAGGCGG 60.203 66.667 20.43 0.00 37.29 6.13
4872 10517 2.202810 GGGAGAAGCTTCGAGGCG 60.203 66.667 20.43 0.00 37.29 5.52
4873 10518 0.461163 GAAGGGAGAAGCTTCGAGGC 60.461 60.000 20.43 12.25 0.00 4.70
4874 10519 0.176910 GGAAGGGAGAAGCTTCGAGG 59.823 60.000 20.43 0.00 0.00 4.63
4875 10520 0.176910 GGGAAGGGAGAAGCTTCGAG 59.823 60.000 20.43 0.00 0.00 4.04
4876 10521 1.605058 CGGGAAGGGAGAAGCTTCGA 61.605 60.000 20.43 0.00 0.00 3.71
4877 10522 1.153549 CGGGAAGGGAGAAGCTTCG 60.154 63.158 20.43 2.38 0.00 3.79
4878 10523 1.222113 CCGGGAAGGGAGAAGCTTC 59.778 63.158 19.11 19.11 35.97 3.86
4879 10524 1.539124 ACCGGGAAGGGAGAAGCTT 60.539 57.895 6.32 0.00 46.96 3.74
4880 10525 1.990614 GACCGGGAAGGGAGAAGCT 60.991 63.158 6.32 0.00 46.96 3.74
4881 10526 2.585153 GACCGGGAAGGGAGAAGC 59.415 66.667 6.32 0.00 46.96 3.86
4882 10527 2.893398 CGACCGGGAAGGGAGAAG 59.107 66.667 6.32 0.00 46.96 2.85
4883 10528 3.387947 GCGACCGGGAAGGGAGAA 61.388 66.667 6.32 0.00 46.96 2.87
4901 10546 4.893601 GGAGTAGCTTCCGCGGCC 62.894 72.222 23.51 9.67 42.32 6.13
4902 10547 3.776659 GAGGAGTAGCTTCCGCGGC 62.777 68.421 23.51 9.39 42.29 6.53
4903 10548 2.413765 GAGGAGTAGCTTCCGCGG 59.586 66.667 22.12 22.12 42.29 6.46
4905 10550 0.248702 CTTCGAGGAGTAGCTTCCGC 60.249 60.000 0.00 0.00 42.29 5.54
4906 10551 0.248702 GCTTCGAGGAGTAGCTTCCG 60.249 60.000 0.00 0.00 42.29 4.30
4907 10552 3.652292 GCTTCGAGGAGTAGCTTCC 57.348 57.895 0.00 0.00 39.74 3.46
4911 10556 0.103390 GGGAAGCTTCGAGGAGTAGC 59.897 60.000 19.91 0.00 42.68 3.58
4912 10557 1.407258 CAGGGAAGCTTCGAGGAGTAG 59.593 57.143 19.91 0.83 0.00 2.57
4913 10558 1.475403 CAGGGAAGCTTCGAGGAGTA 58.525 55.000 19.91 0.00 0.00 2.59
4914 10559 1.893919 GCAGGGAAGCTTCGAGGAGT 61.894 60.000 19.91 0.00 0.00 3.85
4915 10560 1.153469 GCAGGGAAGCTTCGAGGAG 60.153 63.158 19.91 9.10 0.00 3.69
4916 10561 1.608717 GAGCAGGGAAGCTTCGAGGA 61.609 60.000 19.91 0.00 46.75 3.71
4917 10562 1.153469 GAGCAGGGAAGCTTCGAGG 60.153 63.158 19.91 12.12 46.75 4.63
4918 10563 0.459934 CAGAGCAGGGAAGCTTCGAG 60.460 60.000 19.91 12.78 46.75 4.04
4919 10564 1.593787 CAGAGCAGGGAAGCTTCGA 59.406 57.895 19.91 0.00 46.75 3.71
4920 10565 1.449246 CCAGAGCAGGGAAGCTTCG 60.449 63.158 19.91 7.86 46.75 3.79
4921 10566 0.545646 ATCCAGAGCAGGGAAGCTTC 59.454 55.000 18.54 18.54 46.75 3.86
4922 10567 0.998145 AATCCAGAGCAGGGAAGCTT 59.002 50.000 0.00 0.00 46.75 3.74
4924 10569 1.382692 GCAATCCAGAGCAGGGAAGC 61.383 60.000 0.00 0.00 38.09 3.86
4925 10570 0.034767 TGCAATCCAGAGCAGGGAAG 60.035 55.000 0.00 0.00 38.09 3.46
4926 10571 0.322816 GTGCAATCCAGAGCAGGGAA 60.323 55.000 0.00 0.00 42.14 3.97
4927 10572 1.203441 AGTGCAATCCAGAGCAGGGA 61.203 55.000 0.00 0.00 42.14 4.20
4928 10573 0.323178 AAGTGCAATCCAGAGCAGGG 60.323 55.000 0.00 0.00 42.14 4.45
4929 10574 0.809385 CAAGTGCAATCCAGAGCAGG 59.191 55.000 0.00 0.00 42.14 4.85
4930 10575 0.170561 GCAAGTGCAATCCAGAGCAG 59.829 55.000 0.00 0.00 42.14 4.24
4931 10576 0.251033 AGCAAGTGCAATCCAGAGCA 60.251 50.000 6.00 0.00 45.16 4.26
4932 10577 1.742761 TAGCAAGTGCAATCCAGAGC 58.257 50.000 6.00 0.00 45.16 4.09
4933 10578 4.197750 AGATTAGCAAGTGCAATCCAGAG 58.802 43.478 17.34 0.00 45.16 3.35
4934 10579 4.226427 AGATTAGCAAGTGCAATCCAGA 57.774 40.909 17.34 0.00 45.16 3.86
4935 10580 4.439700 CCAAGATTAGCAAGTGCAATCCAG 60.440 45.833 17.34 12.83 45.16 3.86
4936 10581 3.444742 CCAAGATTAGCAAGTGCAATCCA 59.555 43.478 17.34 0.00 45.16 3.41
4937 10582 3.736126 GCCAAGATTAGCAAGTGCAATCC 60.736 47.826 17.34 2.78 45.16 3.01
4938 10583 3.442100 GCCAAGATTAGCAAGTGCAATC 58.558 45.455 6.00 11.81 45.16 2.67
4939 10584 2.167075 GGCCAAGATTAGCAAGTGCAAT 59.833 45.455 6.00 3.67 45.16 3.56
4940 10585 1.545582 GGCCAAGATTAGCAAGTGCAA 59.454 47.619 6.00 0.00 45.16 4.08
4941 10586 1.176527 GGCCAAGATTAGCAAGTGCA 58.823 50.000 6.00 0.00 45.16 4.57
4942 10587 1.403323 GAGGCCAAGATTAGCAAGTGC 59.597 52.381 5.01 0.00 42.49 4.40
4943 10588 2.019984 GGAGGCCAAGATTAGCAAGTG 58.980 52.381 5.01 0.00 0.00 3.16
4944 10589 1.918957 AGGAGGCCAAGATTAGCAAGT 59.081 47.619 5.01 0.00 0.00 3.16
4945 10590 2.725221 AGGAGGCCAAGATTAGCAAG 57.275 50.000 5.01 0.00 0.00 4.01
4946 10591 3.976654 AGATAGGAGGCCAAGATTAGCAA 59.023 43.478 5.01 0.00 0.00 3.91
4947 10592 3.591789 AGATAGGAGGCCAAGATTAGCA 58.408 45.455 5.01 0.00 0.00 3.49
4948 10593 4.322567 CAAGATAGGAGGCCAAGATTAGC 58.677 47.826 5.01 0.00 0.00 3.09
4949 10594 4.349342 ACCAAGATAGGAGGCCAAGATTAG 59.651 45.833 5.01 0.00 0.00 1.73
4950 10595 4.103153 CACCAAGATAGGAGGCCAAGATTA 59.897 45.833 5.01 0.00 0.00 1.75
4951 10596 3.117738 CACCAAGATAGGAGGCCAAGATT 60.118 47.826 5.01 0.00 0.00 2.40
4952 10597 2.441001 CACCAAGATAGGAGGCCAAGAT 59.559 50.000 5.01 0.00 0.00 2.40
4953 10598 1.839994 CACCAAGATAGGAGGCCAAGA 59.160 52.381 5.01 0.00 0.00 3.02
4954 10599 1.561542 ACACCAAGATAGGAGGCCAAG 59.438 52.381 5.01 0.00 0.00 3.61
4955 10600 1.559682 GACACCAAGATAGGAGGCCAA 59.440 52.381 5.01 0.00 0.00 4.52
4956 10601 1.204146 GACACCAAGATAGGAGGCCA 58.796 55.000 5.01 0.00 0.00 5.36
4957 10602 1.139853 CTGACACCAAGATAGGAGGCC 59.860 57.143 0.00 0.00 0.00 5.19
4958 10603 1.834263 ACTGACACCAAGATAGGAGGC 59.166 52.381 0.00 0.00 0.00 4.70
4959 10604 3.131933 CAGACTGACACCAAGATAGGAGG 59.868 52.174 0.00 0.00 0.00 4.30
4960 10605 3.766591 ACAGACTGACACCAAGATAGGAG 59.233 47.826 10.08 0.00 0.00 3.69
4961 10606 3.764434 GACAGACTGACACCAAGATAGGA 59.236 47.826 10.08 0.00 0.00 2.94
4962 10607 3.511540 TGACAGACTGACACCAAGATAGG 59.488 47.826 10.08 0.00 0.00 2.57
4963 10608 4.742417 CTGACAGACTGACACCAAGATAG 58.258 47.826 10.08 0.00 0.00 2.08
4964 10609 3.056536 GCTGACAGACTGACACCAAGATA 60.057 47.826 10.08 0.00 0.00 1.98
4965 10610 2.289320 GCTGACAGACTGACACCAAGAT 60.289 50.000 10.08 0.00 0.00 2.40
4966 10611 1.069204 GCTGACAGACTGACACCAAGA 59.931 52.381 10.08 0.00 0.00 3.02
4967 10612 1.202568 TGCTGACAGACTGACACCAAG 60.203 52.381 10.08 0.00 0.00 3.61
4968 10613 0.829990 TGCTGACAGACTGACACCAA 59.170 50.000 10.08 0.00 0.00 3.67
4969 10614 1.051008 ATGCTGACAGACTGACACCA 58.949 50.000 10.08 7.42 0.00 4.17
4970 10615 1.802960 CAATGCTGACAGACTGACACC 59.197 52.381 10.08 1.16 0.00 4.16
4971 10616 2.759191 TCAATGCTGACAGACTGACAC 58.241 47.619 10.08 5.19 0.00 3.67
4972 10617 3.133691 GTTCAATGCTGACAGACTGACA 58.866 45.455 10.08 8.56 0.00 3.58
4973 10618 2.481952 GGTTCAATGCTGACAGACTGAC 59.518 50.000 10.08 3.32 0.00 3.51
4974 10619 2.369860 AGGTTCAATGCTGACAGACTGA 59.630 45.455 10.08 2.11 0.00 3.41
4975 10620 2.740981 GAGGTTCAATGCTGACAGACTG 59.259 50.000 6.65 0.00 0.00 3.51
4976 10621 2.636893 AGAGGTTCAATGCTGACAGACT 59.363 45.455 6.65 0.00 0.00 3.24
4977 10622 2.740981 CAGAGGTTCAATGCTGACAGAC 59.259 50.000 6.65 0.00 0.00 3.51
4978 10623 2.873245 GCAGAGGTTCAATGCTGACAGA 60.873 50.000 6.65 0.00 37.00 3.41
4979 10624 1.467734 GCAGAGGTTCAATGCTGACAG 59.532 52.381 0.00 0.00 37.00 3.51
4980 10625 1.202794 TGCAGAGGTTCAATGCTGACA 60.203 47.619 0.00 0.00 40.62 3.58
4981 10626 1.527034 TGCAGAGGTTCAATGCTGAC 58.473 50.000 0.00 0.00 40.62 3.51
4982 10627 2.290450 TGATGCAGAGGTTCAATGCTGA 60.290 45.455 0.00 0.00 40.62 4.26
4983 10628 2.089201 TGATGCAGAGGTTCAATGCTG 58.911 47.619 0.00 0.00 40.62 4.41
4984 10629 2.089980 GTGATGCAGAGGTTCAATGCT 58.910 47.619 0.00 0.00 40.62 3.79
4985 10630 1.814394 TGTGATGCAGAGGTTCAATGC 59.186 47.619 0.00 0.00 40.40 3.56
5012 10657 1.042003 TGCCTTTGGTTGAGCAAGCA 61.042 50.000 10.70 10.70 45.73 3.91
5013 10658 0.319297 CTGCCTTTGGTTGAGCAAGC 60.319 55.000 5.52 5.52 39.12 4.01
5014 10659 1.000938 GACTGCCTTTGGTTGAGCAAG 60.001 52.381 0.00 0.00 34.26 4.01
5015 10660 1.032014 GACTGCCTTTGGTTGAGCAA 58.968 50.000 0.00 0.00 34.26 3.91
5016 10661 0.823356 GGACTGCCTTTGGTTGAGCA 60.823 55.000 0.00 0.00 0.00 4.26
5017 10662 0.823356 TGGACTGCCTTTGGTTGAGC 60.823 55.000 0.00 0.00 34.31 4.26
5018 10663 1.242076 CTGGACTGCCTTTGGTTGAG 58.758 55.000 0.00 0.00 34.31 3.02
5019 10664 0.178992 CCTGGACTGCCTTTGGTTGA 60.179 55.000 0.00 0.00 34.31 3.18
5020 10665 1.181098 CCCTGGACTGCCTTTGGTTG 61.181 60.000 0.00 0.00 34.31 3.77
5021 10666 1.153756 CCCTGGACTGCCTTTGGTT 59.846 57.895 0.00 0.00 34.31 3.67
5022 10667 2.845345 CCCCTGGACTGCCTTTGGT 61.845 63.158 0.00 0.00 34.31 3.67
5023 10668 2.036256 CCCCTGGACTGCCTTTGG 59.964 66.667 0.00 0.00 34.31 3.28
5024 10669 2.036256 CCCCCTGGACTGCCTTTG 59.964 66.667 0.00 0.00 34.31 2.77
5025 10670 2.452491 ACCCCCTGGACTGCCTTT 60.452 61.111 0.00 0.00 34.81 3.11
5026 10671 3.260100 CACCCCCTGGACTGCCTT 61.260 66.667 0.00 0.00 34.81 4.35
5027 10672 3.810687 TTCACCCCCTGGACTGCCT 62.811 63.158 0.00 0.00 34.81 4.75
5028 10673 2.840753 TTTCACCCCCTGGACTGCC 61.841 63.158 0.00 0.00 34.81 4.85
5029 10674 1.603739 GTTTCACCCCCTGGACTGC 60.604 63.158 0.00 0.00 34.81 4.40
5030 10675 1.302511 CGTTTCACCCCCTGGACTG 60.303 63.158 0.00 0.00 34.81 3.51
5031 10676 3.157680 CGTTTCACCCCCTGGACT 58.842 61.111 0.00 0.00 34.81 3.85
5032 10677 2.671963 GCGTTTCACCCCCTGGAC 60.672 66.667 0.00 0.00 34.81 4.02
5033 10678 2.075355 AATGCGTTTCACCCCCTGGA 62.075 55.000 0.00 0.00 34.81 3.86
5034 10679 1.606313 AATGCGTTTCACCCCCTGG 60.606 57.895 0.00 0.00 37.80 4.45
5035 10680 1.178534 ACAATGCGTTTCACCCCCTG 61.179 55.000 0.00 0.00 0.00 4.45
5036 10681 0.402504 TACAATGCGTTTCACCCCCT 59.597 50.000 0.00 0.00 0.00 4.79
5037 10682 1.404035 GATACAATGCGTTTCACCCCC 59.596 52.381 0.00 0.00 0.00 5.40
5038 10683 2.088423 TGATACAATGCGTTTCACCCC 58.912 47.619 0.00 0.00 31.52 4.95
5039 10684 4.370364 AATGATACAATGCGTTTCACCC 57.630 40.909 0.00 0.00 38.23 4.61
5040 10685 6.119144 AGTAATGATACAATGCGTTTCACC 57.881 37.500 0.00 0.00 38.23 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.