Multiple sequence alignment - TraesCS6B01G271600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G271600 chr6B 100.000 3927 0 0 1 3927 489832072 489835998 0.000000e+00 7252.0
1 TraesCS6B01G271600 chr6B 78.819 288 45 4 156 430 571725576 571725860 3.120000e-41 180.0
2 TraesCS6B01G271600 chr6B 89.888 89 8 1 3098 3186 30061117 30061204 3.210000e-21 113.0
3 TraesCS6B01G271600 chr6B 90.588 85 7 1 3113 3196 30070500 30070584 1.150000e-20 111.0
4 TraesCS6B01G271600 chr6B 77.419 186 37 5 469 651 89175202 89175019 5.370000e-19 106.0
5 TraesCS6B01G271600 chr6A 91.357 2661 146 46 641 3262 470065680 470068295 0.000000e+00 3563.0
6 TraesCS6B01G271600 chr6A 87.390 341 38 4 3588 3927 470068346 470068682 1.710000e-103 387.0
7 TraesCS6B01G271600 chr6A 89.130 276 26 3 3272 3544 591650032 591650306 1.350000e-89 340.0
8 TraesCS6B01G271600 chr6A 88.803 259 25 4 3289 3544 522224931 522224674 8.190000e-82 315.0
9 TraesCS6B01G271600 chr6A 86.380 279 33 4 3269 3544 157337310 157337586 2.290000e-77 300.0
10 TraesCS6B01G271600 chr6A 91.011 89 7 1 3098 3186 17710527 17710614 6.890000e-23 119.0
11 TraesCS6B01G271600 chr6D 91.184 2643 142 40 422 3007 331198281 331200889 0.000000e+00 3506.0
12 TraesCS6B01G271600 chr6D 88.047 343 27 5 3586 3927 331203038 331203367 1.020000e-105 394.0
13 TraesCS6B01G271600 chr6D 91.724 145 11 1 3054 3197 331201013 331201157 2.390000e-47 200.0
14 TraesCS6B01G271600 chr6D 93.421 76 5 0 3111 3186 17133240 17133315 3.210000e-21 113.0
15 TraesCS6B01G271600 chr6D 92.405 79 5 1 3109 3186 17165929 17166007 1.150000e-20 111.0
16 TraesCS6B01G271600 chr6D 91.667 72 3 2 3194 3262 331202891 331202962 3.230000e-16 97.1
17 TraesCS6B01G271600 chr5A 88.172 279 28 4 3269 3544 352899701 352899977 1.050000e-85 327.0
18 TraesCS6B01G271600 chr5A 87.956 274 30 2 3274 3544 275102009 275102282 1.760000e-83 320.0
19 TraesCS6B01G271600 chr5A 92.000 150 12 0 2 151 591097438 591097587 1.110000e-50 211.0
20 TraesCS6B01G271600 chr5A 77.736 265 37 14 206 451 25121613 25121352 4.090000e-30 143.0
21 TraesCS6B01G271600 chr7A 88.043 276 28 3 3272 3544 109458180 109457907 4.900000e-84 322.0
22 TraesCS6B01G271600 chr7A 91.463 82 5 1 3119 3198 725436466 725436547 1.150000e-20 111.0
23 TraesCS6B01G271600 chr4B 89.105 257 25 2 3289 3542 671773418 671773162 2.280000e-82 316.0
24 TraesCS6B01G271600 chr4B 81.959 194 28 5 166 352 41202017 41201824 1.460000e-34 158.0
25 TraesCS6B01G271600 chr3A 88.417 259 27 2 3289 3544 180745723 180745981 3.810000e-80 309.0
26 TraesCS6B01G271600 chr2A 86.232 276 30 5 3274 3544 751397306 751397034 3.840000e-75 292.0
27 TraesCS6B01G271600 chr2A 76.294 367 63 15 299 653 646828560 646828914 1.450000e-39 174.0
28 TraesCS6B01G271600 chr5B 77.309 498 84 14 152 634 383026623 383027106 2.330000e-67 267.0
29 TraesCS6B01G271600 chr7B 90.604 149 10 2 2 150 621350923 621350779 1.110000e-45 195.0
30 TraesCS6B01G271600 chr7B 77.368 190 26 6 257 430 8537252 8537440 3.230000e-16 97.1
31 TraesCS6B01G271600 chr7B 75.943 212 35 10 238 436 566314840 566314632 1.160000e-15 95.3
32 TraesCS6B01G271600 chr3D 82.432 222 36 3 160 380 300925087 300925306 1.440000e-44 191.0
33 TraesCS6B01G271600 chr3D 88.514 148 13 3 6 151 380452940 380452795 4.030000e-40 176.0
34 TraesCS6B01G271600 chr4D 79.399 233 42 5 194 424 9204790 9205018 4.060000e-35 159.0
35 TraesCS6B01G271600 chr2B 80.597 201 38 1 234 433 495955177 495954977 1.890000e-33 154.0
36 TraesCS6B01G271600 chr2B 87.879 66 8 0 369 434 794980748 794980683 1.170000e-10 78.7
37 TraesCS6B01G271600 chrUn 79.310 203 38 3 166 367 28635967 28636166 5.290000e-29 139.0
38 TraesCS6B01G271600 chrUn 91.463 82 5 1 3119 3198 88198357 88198438 1.150000e-20 111.0
39 TraesCS6B01G271600 chr2D 79.365 189 38 1 466 653 482678680 482678868 8.850000e-27 132.0
40 TraesCS6B01G271600 chr1A 73.311 296 51 19 167 437 540192528 540192820 2.510000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G271600 chr6B 489832072 489835998 3926 False 7252.000 7252 100.0000 1 3927 1 chr6B.!!$F3 3926
1 TraesCS6B01G271600 chr6A 470065680 470068682 3002 False 1975.000 3563 89.3735 641 3927 2 chr6A.!!$F4 3286
2 TraesCS6B01G271600 chr6D 331198281 331203367 5086 False 1049.275 3506 90.6555 422 3927 4 chr6D.!!$F3 3505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
193 194 0.031314 CATCGTCGGAGATGTCCCTG 59.969 60.0 2.75 0.0 45.22 4.45 F
417 418 0.034616 CATCCTCATCCGGCTTCTCC 59.965 60.0 0.00 0.0 0.00 3.71 F
612 617 0.038159 ATCTACTTATCCGGCAGCGC 60.038 55.0 0.00 0.0 0.00 5.92 F
655 660 0.257039 AGATGGCGATTGGAAAGGCT 59.743 50.0 0.00 0.0 30.85 4.58 F
2594 2615 0.040514 TTGTCGCGGTTTGCTTCATG 60.041 50.0 6.13 0.0 43.27 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1204 1216 0.239347 CCTTGAGCCTGCAAGAAACG 59.761 55.000 11.78 0.0 46.31 3.60 R
2372 2391 1.183030 GGGCCCCCTTAACACACAAC 61.183 60.000 12.23 0.0 0.00 3.32 R
2595 2616 1.001048 ACGCGCACAGAAGTAGTAACA 60.001 47.619 5.73 0.0 0.00 2.41 R
2596 2617 1.694639 ACGCGCACAGAAGTAGTAAC 58.305 50.000 5.73 0.0 0.00 2.50 R
3877 5782 0.183492 TATGCATGGAGGGGAAGTGC 59.817 55.000 10.16 0.0 36.39 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.911928 TGCGGACAACCTCAACCA 59.088 55.556 0.00 0.00 0.00 3.67
18 19 1.227823 TGCGGACAACCTCAACCAG 60.228 57.895 0.00 0.00 0.00 4.00
19 20 1.227853 GCGGACAACCTCAACCAGT 60.228 57.895 0.00 0.00 0.00 4.00
20 21 0.818040 GCGGACAACCTCAACCAGTT 60.818 55.000 0.00 0.00 0.00 3.16
21 22 1.675552 CGGACAACCTCAACCAGTTT 58.324 50.000 0.00 0.00 0.00 2.66
22 23 2.021457 CGGACAACCTCAACCAGTTTT 58.979 47.619 0.00 0.00 0.00 2.43
23 24 2.425668 CGGACAACCTCAACCAGTTTTT 59.574 45.455 0.00 0.00 0.00 1.94
24 25 3.488553 CGGACAACCTCAACCAGTTTTTC 60.489 47.826 0.00 0.00 0.00 2.29
25 26 3.488553 GGACAACCTCAACCAGTTTTTCG 60.489 47.826 0.00 0.00 0.00 3.46
26 27 3.086282 ACAACCTCAACCAGTTTTTCGT 58.914 40.909 0.00 0.00 0.00 3.85
27 28 3.119637 ACAACCTCAACCAGTTTTTCGTG 60.120 43.478 0.00 0.00 0.00 4.35
28 29 2.021457 ACCTCAACCAGTTTTTCGTGG 58.979 47.619 0.00 0.00 39.98 4.94
29 30 1.336755 CCTCAACCAGTTTTTCGTGGG 59.663 52.381 0.00 0.00 38.25 4.61
30 31 2.294074 CTCAACCAGTTTTTCGTGGGA 58.706 47.619 0.00 0.00 38.25 4.37
31 32 2.685897 CTCAACCAGTTTTTCGTGGGAA 59.314 45.455 0.00 0.00 38.25 3.97
32 33 3.292460 TCAACCAGTTTTTCGTGGGAAT 58.708 40.909 0.00 0.00 38.25 3.01
33 34 4.462133 TCAACCAGTTTTTCGTGGGAATA 58.538 39.130 0.00 0.00 38.25 1.75
34 35 5.074115 TCAACCAGTTTTTCGTGGGAATAT 58.926 37.500 0.00 0.00 38.25 1.28
35 36 5.536916 TCAACCAGTTTTTCGTGGGAATATT 59.463 36.000 0.00 0.00 38.25 1.28
36 37 5.638596 ACCAGTTTTTCGTGGGAATATTC 57.361 39.130 6.93 6.93 38.25 1.75
37 38 5.074115 ACCAGTTTTTCGTGGGAATATTCA 58.926 37.500 17.07 0.00 38.25 2.57
38 39 5.183140 ACCAGTTTTTCGTGGGAATATTCAG 59.817 40.000 17.07 5.63 38.25 3.02
39 40 5.393027 CCAGTTTTTCGTGGGAATATTCAGG 60.393 44.000 17.07 4.41 30.88 3.86
40 41 5.414454 CAGTTTTTCGTGGGAATATTCAGGA 59.586 40.000 17.07 6.62 30.88 3.86
41 42 6.007703 AGTTTTTCGTGGGAATATTCAGGAA 58.992 36.000 17.07 11.75 36.43 3.36
42 43 6.663523 AGTTTTTCGTGGGAATATTCAGGAAT 59.336 34.615 17.07 0.00 37.53 3.01
43 44 6.693315 TTTTCGTGGGAATATTCAGGAATC 57.307 37.500 17.07 0.00 37.53 2.52
44 45 3.990092 TCGTGGGAATATTCAGGAATCG 58.010 45.455 17.07 11.48 32.50 3.34
45 46 3.386726 TCGTGGGAATATTCAGGAATCGT 59.613 43.478 17.07 0.00 32.50 3.73
46 47 3.494626 CGTGGGAATATTCAGGAATCGTG 59.505 47.826 17.07 0.00 32.50 4.35
47 48 3.815401 GTGGGAATATTCAGGAATCGTGG 59.185 47.826 17.07 0.00 32.50 4.94
48 49 2.814336 GGGAATATTCAGGAATCGTGGC 59.186 50.000 17.07 0.00 32.50 5.01
49 50 3.496870 GGGAATATTCAGGAATCGTGGCT 60.497 47.826 17.07 0.00 32.50 4.75
50 51 3.499918 GGAATATTCAGGAATCGTGGCTG 59.500 47.826 17.07 0.00 32.50 4.85
51 52 1.953559 TATTCAGGAATCGTGGCTGC 58.046 50.000 2.96 0.00 32.50 5.25
52 53 0.749454 ATTCAGGAATCGTGGCTGCC 60.749 55.000 12.87 12.87 0.00 4.85
53 54 2.819984 TTCAGGAATCGTGGCTGCCC 62.820 60.000 17.53 6.66 0.00 5.36
54 55 3.011517 AGGAATCGTGGCTGCCCT 61.012 61.111 17.53 0.29 0.00 5.19
55 56 2.514824 GGAATCGTGGCTGCCCTC 60.515 66.667 17.53 8.53 0.00 4.30
56 57 2.268920 GAATCGTGGCTGCCCTCA 59.731 61.111 17.53 0.00 0.00 3.86
57 58 1.377202 GAATCGTGGCTGCCCTCAA 60.377 57.895 17.53 0.00 0.00 3.02
58 59 1.648467 GAATCGTGGCTGCCCTCAAC 61.648 60.000 17.53 6.51 0.00 3.18
59 60 3.628646 ATCGTGGCTGCCCTCAACC 62.629 63.158 17.53 0.00 0.00 3.77
60 61 4.641645 CGTGGCTGCCCTCAACCA 62.642 66.667 17.53 0.00 36.18 3.67
61 62 2.674380 GTGGCTGCCCTCAACCAG 60.674 66.667 17.53 0.00 38.98 4.00
65 66 3.970410 CTGCCCTCAACCAGCCCA 61.970 66.667 0.00 0.00 0.00 5.36
66 67 3.267233 TGCCCTCAACCAGCCCAT 61.267 61.111 0.00 0.00 0.00 4.00
67 68 2.440980 GCCCTCAACCAGCCCATC 60.441 66.667 0.00 0.00 0.00 3.51
68 69 2.276740 CCCTCAACCAGCCCATCC 59.723 66.667 0.00 0.00 0.00 3.51
69 70 2.311854 CCCTCAACCAGCCCATCCT 61.312 63.158 0.00 0.00 0.00 3.24
70 71 1.225704 CCTCAACCAGCCCATCCTC 59.774 63.158 0.00 0.00 0.00 3.71
71 72 1.277580 CCTCAACCAGCCCATCCTCT 61.278 60.000 0.00 0.00 0.00 3.69
72 73 0.179936 CTCAACCAGCCCATCCTCTC 59.820 60.000 0.00 0.00 0.00 3.20
73 74 1.153289 CAACCAGCCCATCCTCTCG 60.153 63.158 0.00 0.00 0.00 4.04
74 75 1.613630 AACCAGCCCATCCTCTCGT 60.614 57.895 0.00 0.00 0.00 4.18
75 76 1.617947 AACCAGCCCATCCTCTCGTC 61.618 60.000 0.00 0.00 0.00 4.20
76 77 2.801631 CCAGCCCATCCTCTCGTCC 61.802 68.421 0.00 0.00 0.00 4.79
77 78 2.060383 CAGCCCATCCTCTCGTCCA 61.060 63.158 0.00 0.00 0.00 4.02
78 79 1.306141 AGCCCATCCTCTCGTCCAA 60.306 57.895 0.00 0.00 0.00 3.53
79 80 0.909610 AGCCCATCCTCTCGTCCAAA 60.910 55.000 0.00 0.00 0.00 3.28
80 81 0.744771 GCCCATCCTCTCGTCCAAAC 60.745 60.000 0.00 0.00 0.00 2.93
81 82 0.613260 CCCATCCTCTCGTCCAAACA 59.387 55.000 0.00 0.00 0.00 2.83
82 83 1.406069 CCCATCCTCTCGTCCAAACAG 60.406 57.143 0.00 0.00 0.00 3.16
83 84 1.363744 CATCCTCTCGTCCAAACAGC 58.636 55.000 0.00 0.00 0.00 4.40
84 85 1.066573 CATCCTCTCGTCCAAACAGCT 60.067 52.381 0.00 0.00 0.00 4.24
85 86 0.318441 TCCTCTCGTCCAAACAGCTG 59.682 55.000 13.48 13.48 0.00 4.24
86 87 1.294659 CCTCTCGTCCAAACAGCTGC 61.295 60.000 15.27 0.00 0.00 5.25
87 88 1.294659 CTCTCGTCCAAACAGCTGCC 61.295 60.000 15.27 0.00 0.00 4.85
88 89 1.597854 CTCGTCCAAACAGCTGCCA 60.598 57.895 15.27 0.00 0.00 4.92
89 90 0.957395 CTCGTCCAAACAGCTGCCAT 60.957 55.000 15.27 0.00 0.00 4.40
90 91 0.955428 TCGTCCAAACAGCTGCCATC 60.955 55.000 15.27 0.00 0.00 3.51
91 92 1.885871 GTCCAAACAGCTGCCATCC 59.114 57.895 15.27 0.00 0.00 3.51
92 93 1.304381 TCCAAACAGCTGCCATCCC 60.304 57.895 15.27 0.00 0.00 3.85
93 94 1.304713 CCAAACAGCTGCCATCCCT 60.305 57.895 15.27 0.00 0.00 4.20
94 95 0.034186 CCAAACAGCTGCCATCCCTA 60.034 55.000 15.27 0.00 0.00 3.53
95 96 1.616725 CCAAACAGCTGCCATCCCTAA 60.617 52.381 15.27 0.00 0.00 2.69
96 97 2.170166 CAAACAGCTGCCATCCCTAAA 58.830 47.619 15.27 0.00 0.00 1.85
97 98 2.562298 CAAACAGCTGCCATCCCTAAAA 59.438 45.455 15.27 0.00 0.00 1.52
98 99 2.603075 ACAGCTGCCATCCCTAAAAA 57.397 45.000 15.27 0.00 0.00 1.94
117 118 4.455070 AAAAAGTGGCTATCCCTATCCC 57.545 45.455 0.00 0.00 0.00 3.85
118 119 2.815357 AAGTGGCTATCCCTATCCCA 57.185 50.000 0.00 0.00 0.00 4.37
119 120 3.297994 AAGTGGCTATCCCTATCCCAT 57.702 47.619 0.00 0.00 0.00 4.00
120 121 2.839228 AGTGGCTATCCCTATCCCATC 58.161 52.381 0.00 0.00 0.00 3.51
121 122 2.114323 AGTGGCTATCCCTATCCCATCA 59.886 50.000 0.00 0.00 0.00 3.07
122 123 3.118531 GTGGCTATCCCTATCCCATCAT 58.881 50.000 0.00 0.00 0.00 2.45
123 124 3.135530 GTGGCTATCCCTATCCCATCATC 59.864 52.174 0.00 0.00 0.00 2.92
124 125 3.014458 TGGCTATCCCTATCCCATCATCT 59.986 47.826 0.00 0.00 0.00 2.90
125 126 3.390639 GGCTATCCCTATCCCATCATCTG 59.609 52.174 0.00 0.00 0.00 2.90
126 127 4.293494 GCTATCCCTATCCCATCATCTGA 58.707 47.826 0.00 0.00 0.00 3.27
127 128 4.906664 GCTATCCCTATCCCATCATCTGAT 59.093 45.833 0.00 0.00 34.56 2.90
128 129 6.080682 GCTATCCCTATCCCATCATCTGATA 58.919 44.000 0.00 0.00 32.63 2.15
129 130 6.211184 GCTATCCCTATCCCATCATCTGATAG 59.789 46.154 0.00 0.00 38.33 2.08
130 131 4.293494 TCCCTATCCCATCATCTGATAGC 58.707 47.826 0.00 0.00 37.63 2.97
131 132 3.390639 CCCTATCCCATCATCTGATAGCC 59.609 52.174 0.00 0.00 37.63 3.93
132 133 4.035814 CCTATCCCATCATCTGATAGCCA 58.964 47.826 0.00 0.00 37.63 4.75
133 134 3.996921 ATCCCATCATCTGATAGCCAC 57.003 47.619 0.00 0.00 32.63 5.01
134 135 2.693210 TCCCATCATCTGATAGCCACA 58.307 47.619 0.00 0.00 32.63 4.17
135 136 2.369860 TCCCATCATCTGATAGCCACAC 59.630 50.000 0.00 0.00 32.63 3.82
136 137 2.105306 CCCATCATCTGATAGCCACACA 59.895 50.000 0.00 0.00 32.63 3.72
137 138 3.434024 CCCATCATCTGATAGCCACACAA 60.434 47.826 0.00 0.00 32.63 3.33
138 139 3.562973 CCATCATCTGATAGCCACACAAC 59.437 47.826 0.00 0.00 32.63 3.32
139 140 3.266510 TCATCTGATAGCCACACAACC 57.733 47.619 0.00 0.00 0.00 3.77
140 141 2.571202 TCATCTGATAGCCACACAACCA 59.429 45.455 0.00 0.00 0.00 3.67
141 142 3.008923 TCATCTGATAGCCACACAACCAA 59.991 43.478 0.00 0.00 0.00 3.67
142 143 3.500448 TCTGATAGCCACACAACCAAA 57.500 42.857 0.00 0.00 0.00 3.28
143 144 3.146066 TCTGATAGCCACACAACCAAAC 58.854 45.455 0.00 0.00 0.00 2.93
144 145 1.876799 TGATAGCCACACAACCAAACG 59.123 47.619 0.00 0.00 0.00 3.60
145 146 0.596082 ATAGCCACACAACCAAACGC 59.404 50.000 0.00 0.00 0.00 4.84
146 147 1.448922 TAGCCACACAACCAAACGCC 61.449 55.000 0.00 0.00 0.00 5.68
147 148 3.069980 GCCACACAACCAAACGCCA 62.070 57.895 0.00 0.00 0.00 5.69
148 149 1.226831 CCACACAACCAAACGCCAC 60.227 57.895 0.00 0.00 0.00 5.01
149 150 1.226831 CACACAACCAAACGCCACC 60.227 57.895 0.00 0.00 0.00 4.61
150 151 1.379309 ACACAACCAAACGCCACCT 60.379 52.632 0.00 0.00 0.00 4.00
151 152 0.107116 ACACAACCAAACGCCACCTA 60.107 50.000 0.00 0.00 0.00 3.08
152 153 0.309612 CACAACCAAACGCCACCTAC 59.690 55.000 0.00 0.00 0.00 3.18
153 154 1.161563 ACAACCAAACGCCACCTACG 61.162 55.000 0.00 0.00 0.00 3.51
154 155 1.598685 AACCAAACGCCACCTACGG 60.599 57.895 0.00 0.00 34.00 4.02
155 156 2.744709 CCAAACGCCACCTACGGG 60.745 66.667 0.00 0.00 38.88 5.28
156 157 2.344500 CAAACGCCACCTACGGGA 59.656 61.111 0.00 0.00 36.25 5.14
157 158 1.740296 CAAACGCCACCTACGGGAG 60.740 63.158 0.00 0.00 36.25 4.30
165 166 2.123425 CCTACGGGAGGCTAGCCA 60.123 66.667 34.70 12.79 38.96 4.75
166 167 2.499827 CCTACGGGAGGCTAGCCAC 61.500 68.421 34.70 28.26 38.96 5.01
167 168 1.455959 CTACGGGAGGCTAGCCACT 60.456 63.158 34.70 16.43 38.92 4.00
168 169 0.178998 CTACGGGAGGCTAGCCACTA 60.179 60.000 34.70 16.08 38.92 2.74
169 170 0.481567 TACGGGAGGCTAGCCACTAT 59.518 55.000 34.70 15.19 38.92 2.12
170 171 1.115930 ACGGGAGGCTAGCCACTATG 61.116 60.000 34.70 22.26 38.92 2.23
171 172 1.373059 GGGAGGCTAGCCACTATGC 59.627 63.158 34.70 19.22 38.92 3.14
172 173 1.124477 GGGAGGCTAGCCACTATGCT 61.124 60.000 34.70 13.13 45.38 3.79
173 174 0.761802 GGAGGCTAGCCACTATGCTT 59.238 55.000 34.70 12.30 42.75 3.91
174 175 1.270571 GGAGGCTAGCCACTATGCTTC 60.271 57.143 34.70 20.03 42.75 3.86
175 176 1.414181 GAGGCTAGCCACTATGCTTCA 59.586 52.381 34.70 0.00 42.75 3.02
176 177 2.038295 GAGGCTAGCCACTATGCTTCAT 59.962 50.000 34.70 10.11 42.75 2.57
177 178 2.038295 AGGCTAGCCACTATGCTTCATC 59.962 50.000 34.70 3.04 42.75 2.92
178 179 2.064762 GCTAGCCACTATGCTTCATCG 58.935 52.381 2.29 0.00 42.75 3.84
179 180 2.546795 GCTAGCCACTATGCTTCATCGT 60.547 50.000 2.29 0.00 42.75 3.73
180 181 2.231215 AGCCACTATGCTTCATCGTC 57.769 50.000 0.00 0.00 38.85 4.20
181 182 0.855349 GCCACTATGCTTCATCGTCG 59.145 55.000 0.00 0.00 0.00 5.12
182 183 1.491670 CCACTATGCTTCATCGTCGG 58.508 55.000 0.00 0.00 0.00 4.79
183 184 1.067060 CCACTATGCTTCATCGTCGGA 59.933 52.381 0.00 0.00 0.00 4.55
184 185 2.389059 CACTATGCTTCATCGTCGGAG 58.611 52.381 0.00 0.00 0.00 4.63
185 186 2.033424 CACTATGCTTCATCGTCGGAGA 59.967 50.000 0.00 0.00 0.00 3.71
186 187 2.887783 ACTATGCTTCATCGTCGGAGAT 59.112 45.455 0.00 0.00 40.67 2.75
187 188 2.145958 ATGCTTCATCGTCGGAGATG 57.854 50.000 12.70 12.70 46.90 2.90
188 189 0.817654 TGCTTCATCGTCGGAGATGT 59.182 50.000 16.56 0.00 45.96 3.06
189 190 1.202302 TGCTTCATCGTCGGAGATGTC 60.202 52.381 16.56 10.18 45.96 3.06
190 191 1.866063 GCTTCATCGTCGGAGATGTCC 60.866 57.143 16.56 0.00 45.96 4.02
191 192 0.744874 TTCATCGTCGGAGATGTCCC 59.255 55.000 16.56 0.00 45.96 4.46
192 193 0.106669 TCATCGTCGGAGATGTCCCT 60.107 55.000 16.56 0.00 45.96 4.20
193 194 0.031314 CATCGTCGGAGATGTCCCTG 59.969 60.000 2.75 0.00 45.22 4.45
194 195 0.106669 ATCGTCGGAGATGTCCCTGA 60.107 55.000 2.75 0.00 45.22 3.86
195 196 1.030488 TCGTCGGAGATGTCCCTGAC 61.030 60.000 2.75 5.17 45.22 3.51
196 197 1.433879 GTCGGAGATGTCCCTGACG 59.566 63.158 2.75 0.00 40.20 4.35
197 198 1.001269 TCGGAGATGTCCCTGACGT 60.001 57.895 2.75 0.00 40.20 4.34
198 199 0.611062 TCGGAGATGTCCCTGACGTT 60.611 55.000 2.75 0.00 40.20 3.99
199 200 0.458543 CGGAGATGTCCCTGACGTTG 60.459 60.000 2.75 0.00 40.20 4.10
200 201 0.108138 GGAGATGTCCCTGACGTTGG 60.108 60.000 0.00 0.00 36.76 3.77
201 202 0.608640 GAGATGTCCCTGACGTTGGT 59.391 55.000 7.59 0.00 34.95 3.67
202 203 0.321671 AGATGTCCCTGACGTTGGTG 59.678 55.000 7.59 0.89 34.95 4.17
203 204 0.034896 GATGTCCCTGACGTTGGTGT 59.965 55.000 7.59 0.00 34.95 4.16
204 205 0.472471 ATGTCCCTGACGTTGGTGTT 59.528 50.000 7.59 0.00 34.95 3.32
205 206 0.462937 TGTCCCTGACGTTGGTGTTG 60.463 55.000 7.59 0.00 34.95 3.33
206 207 1.147376 TCCCTGACGTTGGTGTTGG 59.853 57.895 7.59 0.00 0.00 3.77
207 208 1.896660 CCCTGACGTTGGTGTTGGG 60.897 63.158 7.59 0.00 32.34 4.12
208 209 1.153046 CCTGACGTTGGTGTTGGGT 60.153 57.895 0.00 0.00 0.00 4.51
209 210 1.444119 CCTGACGTTGGTGTTGGGTG 61.444 60.000 0.00 0.00 0.00 4.61
210 211 2.058829 CTGACGTTGGTGTTGGGTGC 62.059 60.000 0.00 0.00 0.00 5.01
211 212 2.831284 ACGTTGGTGTTGGGTGCC 60.831 61.111 0.00 0.00 0.00 5.01
212 213 2.830827 CGTTGGTGTTGGGTGCCA 60.831 61.111 0.00 0.00 0.00 4.92
213 214 2.844451 CGTTGGTGTTGGGTGCCAG 61.844 63.158 0.00 0.00 33.81 4.85
214 215 1.454847 GTTGGTGTTGGGTGCCAGA 60.455 57.895 0.00 0.00 33.81 3.86
215 216 0.827507 GTTGGTGTTGGGTGCCAGAT 60.828 55.000 0.00 0.00 33.81 2.90
216 217 0.827089 TTGGTGTTGGGTGCCAGATG 60.827 55.000 0.00 0.00 33.81 2.90
217 218 1.978617 GGTGTTGGGTGCCAGATGG 60.979 63.158 0.00 0.00 33.81 3.51
218 219 1.074775 GTGTTGGGTGCCAGATGGA 59.925 57.895 2.18 0.00 37.39 3.41
219 220 0.323725 GTGTTGGGTGCCAGATGGAT 60.324 55.000 2.18 0.00 37.39 3.41
220 221 0.323633 TGTTGGGTGCCAGATGGATG 60.324 55.000 2.18 0.00 37.39 3.51
221 222 0.323725 GTTGGGTGCCAGATGGATGT 60.324 55.000 2.18 0.00 37.39 3.06
222 223 0.323633 TTGGGTGCCAGATGGATGTG 60.324 55.000 2.18 0.00 37.39 3.21
223 224 2.123428 GGGTGCCAGATGGATGTGC 61.123 63.158 2.18 0.00 37.39 4.57
224 225 2.475466 GGTGCCAGATGGATGTGCG 61.475 63.158 2.18 0.00 37.39 5.34
225 226 2.825387 TGCCAGATGGATGTGCGC 60.825 61.111 0.00 0.00 37.39 6.09
226 227 3.945434 GCCAGATGGATGTGCGCG 61.945 66.667 0.00 0.00 37.39 6.86
227 228 2.512286 CCAGATGGATGTGCGCGT 60.512 61.111 8.43 0.00 37.39 6.01
228 229 1.227234 CCAGATGGATGTGCGCGTA 60.227 57.895 8.43 0.00 37.39 4.42
229 230 1.217585 CCAGATGGATGTGCGCGTAG 61.218 60.000 8.43 0.00 37.39 3.51
230 231 1.068083 AGATGGATGTGCGCGTAGG 59.932 57.895 8.43 0.00 0.00 3.18
231 232 1.067416 GATGGATGTGCGCGTAGGA 59.933 57.895 8.43 0.00 0.00 2.94
232 233 0.941463 GATGGATGTGCGCGTAGGAG 60.941 60.000 8.43 0.00 0.00 3.69
233 234 2.279517 GGATGTGCGCGTAGGAGG 60.280 66.667 8.43 0.00 0.00 4.30
234 235 2.279517 GATGTGCGCGTAGGAGGG 60.280 66.667 8.43 0.00 0.00 4.30
247 248 4.890306 GAGGGCTCCTCCTCCCCC 62.890 77.778 9.46 0.00 45.75 5.40
249 250 4.890306 GGGCTCCTCCTCCCCCTC 62.890 77.778 0.00 0.00 36.50 4.30
250 251 4.890306 GGCTCCTCCTCCCCCTCC 62.890 77.778 0.00 0.00 0.00 4.30
251 252 3.773154 GCTCCTCCTCCCCCTCCT 61.773 72.222 0.00 0.00 0.00 3.69
252 253 2.612251 CTCCTCCTCCCCCTCCTC 59.388 72.222 0.00 0.00 0.00 3.71
253 254 2.018086 CTCCTCCTCCCCCTCCTCT 61.018 68.421 0.00 0.00 0.00 3.69
254 255 2.015726 TCCTCCTCCCCCTCCTCTC 61.016 68.421 0.00 0.00 0.00 3.20
255 256 2.328589 CCTCCTCCCCCTCCTCTCA 61.329 68.421 0.00 0.00 0.00 3.27
256 257 1.673928 CCTCCTCCCCCTCCTCTCAT 61.674 65.000 0.00 0.00 0.00 2.90
257 258 0.178935 CTCCTCCCCCTCCTCTCATC 60.179 65.000 0.00 0.00 0.00 2.92
258 259 1.152139 CCTCCCCCTCCTCTCATCC 60.152 68.421 0.00 0.00 0.00 3.51
259 260 1.628727 CTCCCCCTCCTCTCATCCA 59.371 63.158 0.00 0.00 0.00 3.41
260 261 0.193069 CTCCCCCTCCTCTCATCCAT 59.807 60.000 0.00 0.00 0.00 3.41
261 262 1.434773 CTCCCCCTCCTCTCATCCATA 59.565 57.143 0.00 0.00 0.00 2.74
262 263 2.045605 CTCCCCCTCCTCTCATCCATAT 59.954 54.545 0.00 0.00 0.00 1.78
263 264 3.273351 CTCCCCCTCCTCTCATCCATATA 59.727 52.174 0.00 0.00 0.00 0.86
264 265 3.012959 TCCCCCTCCTCTCATCCATATAC 59.987 52.174 0.00 0.00 0.00 1.47
265 266 3.027412 CCCCTCCTCTCATCCATATACG 58.973 54.545 0.00 0.00 0.00 3.06
266 267 2.428890 CCCTCCTCTCATCCATATACGC 59.571 54.545 0.00 0.00 0.00 4.42
267 268 2.098280 CCTCCTCTCATCCATATACGCG 59.902 54.545 3.53 3.53 0.00 6.01
268 269 3.010420 CTCCTCTCATCCATATACGCGA 58.990 50.000 15.93 0.00 0.00 5.87
269 270 3.010420 TCCTCTCATCCATATACGCGAG 58.990 50.000 15.93 0.00 0.00 5.03
270 271 2.478709 CCTCTCATCCATATACGCGAGC 60.479 54.545 15.93 0.00 0.00 5.03
271 272 2.159382 TCTCATCCATATACGCGAGCA 58.841 47.619 15.93 0.00 0.00 4.26
272 273 2.755103 TCTCATCCATATACGCGAGCAT 59.245 45.455 15.93 5.40 0.00 3.79
273 274 3.111838 CTCATCCATATACGCGAGCATC 58.888 50.000 15.93 0.00 0.00 3.91
274 275 2.755103 TCATCCATATACGCGAGCATCT 59.245 45.455 15.93 0.00 0.00 2.90
275 276 2.921634 TCCATATACGCGAGCATCTC 57.078 50.000 15.93 0.00 0.00 2.75
287 288 1.658095 GAGCATCTCGTCAACTTCTGC 59.342 52.381 0.00 0.00 0.00 4.26
288 289 0.368227 GCATCTCGTCAACTTCTGCG 59.632 55.000 0.00 0.00 0.00 5.18
289 290 0.994995 CATCTCGTCAACTTCTGCGG 59.005 55.000 0.00 0.00 0.00 5.69
290 291 0.737715 ATCTCGTCAACTTCTGCGGC 60.738 55.000 0.00 0.00 0.00 6.53
291 292 2.720758 CTCGTCAACTTCTGCGGCG 61.721 63.158 0.51 0.51 0.00 6.46
292 293 3.036084 CGTCAACTTCTGCGGCGT 61.036 61.111 9.37 0.00 0.00 5.68
293 294 2.551270 GTCAACTTCTGCGGCGTG 59.449 61.111 9.37 1.75 0.00 5.34
294 295 3.345808 TCAACTTCTGCGGCGTGC 61.346 61.111 9.37 0.00 46.70 5.34
295 296 3.349006 CAACTTCTGCGGCGTGCT 61.349 61.111 9.37 0.00 46.63 4.40
296 297 2.591715 AACTTCTGCGGCGTGCTT 60.592 55.556 9.37 0.00 46.63 3.91
297 298 2.607892 AACTTCTGCGGCGTGCTTC 61.608 57.895 9.37 0.00 46.63 3.86
298 299 3.043713 CTTCTGCGGCGTGCTTCA 61.044 61.111 9.37 0.00 46.63 3.02
299 300 3.300667 CTTCTGCGGCGTGCTTCAC 62.301 63.158 9.37 0.00 46.63 3.18
300 301 4.600576 TCTGCGGCGTGCTTCACA 62.601 61.111 9.37 0.00 46.63 3.58
301 302 3.425713 CTGCGGCGTGCTTCACAT 61.426 61.111 9.37 0.00 46.63 3.21
302 303 3.372676 CTGCGGCGTGCTTCACATC 62.373 63.158 9.37 0.00 46.63 3.06
303 304 4.166011 GCGGCGTGCTTCACATCC 62.166 66.667 9.37 0.00 41.73 3.51
304 305 2.741985 CGGCGTGCTTCACATCCA 60.742 61.111 0.00 0.00 33.40 3.41
305 306 2.870372 GGCGTGCTTCACATCCAC 59.130 61.111 0.00 0.00 33.40 4.02
306 307 2.690778 GGCGTGCTTCACATCCACC 61.691 63.158 0.00 0.00 33.40 4.61
307 308 1.672356 GCGTGCTTCACATCCACCT 60.672 57.895 0.00 0.00 33.40 4.00
308 309 1.639298 GCGTGCTTCACATCCACCTC 61.639 60.000 0.00 0.00 33.40 3.85
309 310 1.021390 CGTGCTTCACATCCACCTCC 61.021 60.000 0.00 0.00 33.40 4.30
310 311 0.326264 GTGCTTCACATCCACCTCCT 59.674 55.000 0.00 0.00 34.08 3.69
311 312 0.325933 TGCTTCACATCCACCTCCTG 59.674 55.000 0.00 0.00 0.00 3.86
312 313 1.028868 GCTTCACATCCACCTCCTGC 61.029 60.000 0.00 0.00 0.00 4.85
313 314 0.393537 CTTCACATCCACCTCCTGCC 60.394 60.000 0.00 0.00 0.00 4.85
314 315 2.124983 CACATCCACCTCCTGCCG 60.125 66.667 0.00 0.00 0.00 5.69
315 316 2.284625 ACATCCACCTCCTGCCGA 60.285 61.111 0.00 0.00 0.00 5.54
316 317 2.187946 CATCCACCTCCTGCCGAC 59.812 66.667 0.00 0.00 0.00 4.79
317 318 3.461773 ATCCACCTCCTGCCGACG 61.462 66.667 0.00 0.00 0.00 5.12
318 319 3.957435 ATCCACCTCCTGCCGACGA 62.957 63.158 0.00 0.00 0.00 4.20
319 320 4.436998 CCACCTCCTGCCGACGAC 62.437 72.222 0.00 0.00 0.00 4.34
320 321 4.778415 CACCTCCTGCCGACGACG 62.778 72.222 0.00 0.00 39.43 5.12
322 323 4.477975 CCTCCTGCCGACGACGAC 62.478 72.222 9.28 0.00 42.66 4.34
323 324 4.813526 CTCCTGCCGACGACGACG 62.814 72.222 12.66 12.66 42.66 5.12
333 334 4.477975 CGACGACGTCTGGCCTCC 62.478 72.222 24.36 0.00 34.56 4.30
334 335 4.477975 GACGACGTCTGGCCTCCG 62.478 72.222 20.52 5.98 0.00 4.63
345 346 2.029221 GCCTCCGCCTCCGATTAC 59.971 66.667 0.00 0.00 36.29 1.89
346 347 2.335369 CCTCCGCCTCCGATTACG 59.665 66.667 0.00 0.00 36.29 3.18
347 348 2.191513 CCTCCGCCTCCGATTACGA 61.192 63.158 0.00 0.00 42.66 3.43
348 349 1.008767 CTCCGCCTCCGATTACGAC 60.009 63.158 0.00 0.00 42.66 4.34
349 350 2.027169 CCGCCTCCGATTACGACC 59.973 66.667 0.00 0.00 42.66 4.79
350 351 2.353145 CGCCTCCGATTACGACCG 60.353 66.667 0.00 0.00 42.66 4.79
351 352 2.027169 GCCTCCGATTACGACCGG 59.973 66.667 0.00 0.00 46.57 5.28
352 353 2.726274 CCTCCGATTACGACCGGG 59.274 66.667 6.32 0.00 45.36 5.73
353 354 1.825191 CCTCCGATTACGACCGGGA 60.825 63.158 6.32 0.00 45.36 5.14
354 355 1.653115 CTCCGATTACGACCGGGAG 59.347 63.158 6.32 0.61 45.36 4.30
355 356 1.793134 CTCCGATTACGACCGGGAGG 61.793 65.000 6.32 0.00 45.36 4.30
367 368 2.733590 CGGGAGGAATCGAGGATCA 58.266 57.895 0.00 0.00 33.17 2.92
368 369 0.315568 CGGGAGGAATCGAGGATCAC 59.684 60.000 0.00 0.00 33.17 3.06
369 370 0.682292 GGGAGGAATCGAGGATCACC 59.318 60.000 0.00 0.00 33.17 4.02
380 381 4.040068 GATCACCTGCAGATCCGC 57.960 61.111 17.39 0.00 36.69 5.54
381 382 1.953138 GATCACCTGCAGATCCGCG 60.953 63.158 17.39 0.00 36.69 6.46
382 383 2.635229 GATCACCTGCAGATCCGCGT 62.635 60.000 17.39 0.00 36.69 6.01
383 384 2.635229 ATCACCTGCAGATCCGCGTC 62.635 60.000 17.39 0.00 33.35 5.19
384 385 4.148825 ACCTGCAGATCCGCGTCC 62.149 66.667 17.39 0.00 33.35 4.79
385 386 4.899239 CCTGCAGATCCGCGTCCC 62.899 72.222 17.39 0.00 33.35 4.46
386 387 4.899239 CTGCAGATCCGCGTCCCC 62.899 72.222 8.42 0.00 33.35 4.81
388 389 4.899239 GCAGATCCGCGTCCCCAG 62.899 72.222 4.92 0.00 0.00 4.45
389 390 4.899239 CAGATCCGCGTCCCCAGC 62.899 72.222 4.92 0.00 0.00 4.85
401 402 4.489771 CCCAGCGTCCCCCACATC 62.490 72.222 0.00 0.00 0.00 3.06
402 403 4.489771 CCAGCGTCCCCCACATCC 62.490 72.222 0.00 0.00 0.00 3.51
403 404 3.402681 CAGCGTCCCCCACATCCT 61.403 66.667 0.00 0.00 0.00 3.24
404 405 3.083997 AGCGTCCCCCACATCCTC 61.084 66.667 0.00 0.00 0.00 3.71
405 406 3.399181 GCGTCCCCCACATCCTCA 61.399 66.667 0.00 0.00 0.00 3.86
406 407 2.746375 GCGTCCCCCACATCCTCAT 61.746 63.158 0.00 0.00 0.00 2.90
407 408 1.447643 CGTCCCCCACATCCTCATC 59.552 63.158 0.00 0.00 0.00 2.92
408 409 1.839894 GTCCCCCACATCCTCATCC 59.160 63.158 0.00 0.00 0.00 3.51
409 410 1.766059 TCCCCCACATCCTCATCCG 60.766 63.158 0.00 0.00 0.00 4.18
410 411 2.822637 CCCCCACATCCTCATCCGG 61.823 68.421 0.00 0.00 0.00 5.14
411 412 2.111878 CCCACATCCTCATCCGGC 59.888 66.667 0.00 0.00 0.00 6.13
412 413 2.446848 CCCACATCCTCATCCGGCT 61.447 63.158 0.00 0.00 0.00 5.52
413 414 1.528824 CCACATCCTCATCCGGCTT 59.471 57.895 0.00 0.00 0.00 4.35
414 415 0.533755 CCACATCCTCATCCGGCTTC 60.534 60.000 0.00 0.00 0.00 3.86
415 416 0.467384 CACATCCTCATCCGGCTTCT 59.533 55.000 0.00 0.00 0.00 2.85
416 417 0.755686 ACATCCTCATCCGGCTTCTC 59.244 55.000 0.00 0.00 0.00 2.87
417 418 0.034616 CATCCTCATCCGGCTTCTCC 59.965 60.000 0.00 0.00 0.00 3.71
418 419 0.105246 ATCCTCATCCGGCTTCTCCT 60.105 55.000 0.00 0.00 0.00 3.69
419 420 0.325671 TCCTCATCCGGCTTCTCCTT 60.326 55.000 0.00 0.00 0.00 3.36
420 421 0.105778 CCTCATCCGGCTTCTCCTTC 59.894 60.000 0.00 0.00 0.00 3.46
428 429 1.119684 GGCTTCTCCTTCTCCTCCTC 58.880 60.000 0.00 0.00 0.00 3.71
430 431 1.342975 GCTTCTCCTTCTCCTCCTCCT 60.343 57.143 0.00 0.00 0.00 3.69
431 432 2.666317 CTTCTCCTTCTCCTCCTCCTC 58.334 57.143 0.00 0.00 0.00 3.71
437 438 1.290732 CTTCTCCTCCTCCTCCTCCTT 59.709 57.143 0.00 0.00 0.00 3.36
440 441 1.290732 CTCCTCCTCCTCCTCCTTCTT 59.709 57.143 0.00 0.00 0.00 2.52
441 442 1.289530 TCCTCCTCCTCCTCCTTCTTC 59.710 57.143 0.00 0.00 0.00 2.87
442 443 1.290732 CCTCCTCCTCCTCCTTCTTCT 59.709 57.143 0.00 0.00 0.00 2.85
443 444 2.292851 CCTCCTCCTCCTCCTTCTTCTT 60.293 54.545 0.00 0.00 0.00 2.52
446 450 3.031013 CCTCCTCCTCCTTCTTCTTCTC 58.969 54.545 0.00 0.00 0.00 2.87
452 456 3.078305 TCCTCCTTCTTCTTCTCCTCCTT 59.922 47.826 0.00 0.00 0.00 3.36
484 488 1.150135 TCTTCTCCACCTCCAAGTCCT 59.850 52.381 0.00 0.00 0.00 3.85
486 490 0.252284 TCTCCACCTCCAAGTCCTCC 60.252 60.000 0.00 0.00 0.00 4.30
487 491 0.545309 CTCCACCTCCAAGTCCTCCA 60.545 60.000 0.00 0.00 0.00 3.86
489 493 0.838122 CCACCTCCAAGTCCTCCACT 60.838 60.000 0.00 0.00 36.64 4.00
493 497 1.577736 CTCCAAGTCCTCCACTGGAT 58.422 55.000 0.00 0.00 38.52 3.41
500 504 1.990060 CCTCCACTGGATCCACCGT 60.990 63.158 11.44 5.45 42.61 4.83
503 507 1.079127 CCACTGGATCCACCGTGTC 60.079 63.158 24.82 0.00 42.61 3.67
525 529 2.203070 GGTAGCCCTGCGGTGATG 60.203 66.667 0.00 0.00 0.00 3.07
543 548 4.481112 CGGGCTTCACGCATTGCC 62.481 66.667 2.41 0.00 44.22 4.52
546 551 3.430862 GCTTCACGCATTGCCCGA 61.431 61.111 2.41 0.00 38.92 5.14
551 556 0.176910 TCACGCATTGCCCGAATCTA 59.823 50.000 2.41 0.00 0.00 1.98
562 567 2.035632 CCCGAATCTACTCAAGGAGCT 58.964 52.381 0.00 0.00 32.04 4.09
565 570 2.159184 CGAATCTACTCAAGGAGCTGCA 60.159 50.000 8.35 0.00 32.04 4.41
567 572 0.534412 TCTACTCAAGGAGCTGCAGC 59.466 55.000 31.53 31.53 42.49 5.25
591 596 2.545113 GCGCTCCAACGTTAGATATGGA 60.545 50.000 0.00 1.80 39.57 3.41
594 599 5.651530 CGCTCCAACGTTAGATATGGATAT 58.348 41.667 0.00 0.00 40.94 1.63
607 612 9.298250 TTAGATATGGATATCTACTTATCCGGC 57.702 37.037 13.65 0.00 46.49 6.13
610 615 4.048241 GGATATCTACTTATCCGGCAGC 57.952 50.000 0.00 0.00 38.60 5.25
612 617 0.038159 ATCTACTTATCCGGCAGCGC 60.038 55.000 0.00 0.00 0.00 5.92
613 618 2.016704 CTACTTATCCGGCAGCGCG 61.017 63.158 0.00 0.00 0.00 6.86
636 641 3.009033 GGGCATATCTATTAGTGGTGGCA 59.991 47.826 14.84 0.00 33.00 4.92
653 658 0.383231 GCAGATGGCGATTGGAAAGG 59.617 55.000 0.00 0.00 0.00 3.11
654 659 0.383231 CAGATGGCGATTGGAAAGGC 59.617 55.000 0.00 0.00 0.00 4.35
655 660 0.257039 AGATGGCGATTGGAAAGGCT 59.743 50.000 0.00 0.00 30.85 4.58
658 663 0.677731 TGGCGATTGGAAAGGCTGAG 60.678 55.000 0.00 0.00 30.85 3.35
660 665 1.997928 GCGATTGGAAAGGCTGAGGC 61.998 60.000 0.00 0.00 37.82 4.70
722 727 4.320275 GCTCTTACCCCAAGAAACGAAAAG 60.320 45.833 0.00 0.00 42.76 2.27
727 732 5.607939 ACCCCAAGAAACGAAAAGAAAAT 57.392 34.783 0.00 0.00 0.00 1.82
728 733 5.356426 ACCCCAAGAAACGAAAAGAAAATG 58.644 37.500 0.00 0.00 0.00 2.32
779 787 1.102978 AACGGGCATATGCTTTGGTC 58.897 50.000 26.12 9.08 41.70 4.02
1007 1019 2.282462 CTCCAAACAAGCCCCGCT 60.282 61.111 0.00 0.00 42.56 5.52
1092 1104 1.072505 GGCCGACACCTCCAAGAAA 59.927 57.895 0.00 0.00 0.00 2.52
1131 1143 2.365617 TCTCCGCTTCTTGTGAAACTCT 59.634 45.455 0.00 0.00 38.04 3.24
1146 1158 2.922503 TCTGCGAGGAAGGGTGCA 60.923 61.111 0.00 0.00 35.75 4.57
1185 1197 4.617959 CCGGACGTTTCACATCTATGTAT 58.382 43.478 0.00 0.00 39.39 2.29
1186 1198 4.444388 CCGGACGTTTCACATCTATGTATG 59.556 45.833 0.00 0.00 39.39 2.39
1187 1199 5.041287 CGGACGTTTCACATCTATGTATGT 58.959 41.667 0.00 0.00 40.75 2.29
1188 1200 6.203647 CGGACGTTTCACATCTATGTATGTA 58.796 40.000 0.00 0.00 38.01 2.29
1204 1216 2.902705 TGTAGGTTGTGTGACTGGTC 57.097 50.000 0.00 0.00 0.00 4.02
1402 1414 1.096386 TGTGGTTTCGTCCGGGTTTG 61.096 55.000 0.00 0.00 0.00 2.93
1408 1420 1.868469 TTCGTCCGGGTTTGTTAGTG 58.132 50.000 0.00 0.00 0.00 2.74
1414 1426 4.572909 GTCCGGGTTTGTTAGTGTATCTT 58.427 43.478 0.00 0.00 0.00 2.40
1478 1490 1.609072 GAGAACCCCAACAACAAGAGC 59.391 52.381 0.00 0.00 0.00 4.09
1559 1571 2.694628 ACATCTCAAACTGCTTTTGCCA 59.305 40.909 6.52 0.00 43.90 4.92
1616 1628 5.700183 AGAAGTGGAGAGCTATGTCTGATA 58.300 41.667 0.00 0.00 0.00 2.15
1678 1690 9.368416 TGCATAGATCTTTCCTAGTGTACTTAT 57.632 33.333 0.00 0.00 0.00 1.73
1845 1860 2.335316 TACCGGGTGGCATGATTAAC 57.665 50.000 10.66 0.00 39.70 2.01
1852 1867 3.267483 GGTGGCATGATTAACGTACTGT 58.733 45.455 0.00 0.00 0.00 3.55
1853 1868 4.435425 GGTGGCATGATTAACGTACTGTA 58.565 43.478 0.00 0.00 0.00 2.74
1990 2005 0.387929 CTTGGGATCATGGTGCATGC 59.612 55.000 11.82 11.82 41.18 4.06
2061 2076 2.440539 TTCTTTCAGGAGAGTGCGAC 57.559 50.000 0.00 0.00 0.00 5.19
2062 2077 1.621992 TCTTTCAGGAGAGTGCGACT 58.378 50.000 0.00 0.00 0.00 4.18
2135 2150 2.447408 TGAGGGTAGCGATGAGGTAA 57.553 50.000 0.00 0.00 34.24 2.85
2143 2158 5.124936 GGGTAGCGATGAGGTAAAAACATTT 59.875 40.000 0.00 0.00 34.24 2.32
2193 2212 1.102978 GCGCCCAATGATGTTTACCT 58.897 50.000 0.00 0.00 0.00 3.08
2338 2357 3.006323 AGTTTGCTATCCTGCTATCCTCG 59.994 47.826 0.00 0.00 0.00 4.63
2370 2389 7.932491 AGATGATGAGATTTGGAAGTAGATGTG 59.068 37.037 0.00 0.00 0.00 3.21
2371 2390 5.819379 TGATGAGATTTGGAAGTAGATGTGC 59.181 40.000 0.00 0.00 0.00 4.57
2372 2391 4.183865 TGAGATTTGGAAGTAGATGTGCG 58.816 43.478 0.00 0.00 0.00 5.34
2410 2431 3.326747 CCCTTTTAGACTTGTGGACTCG 58.673 50.000 0.00 0.00 0.00 4.18
2551 2572 2.036256 GACTGCCCAGCCATTGGT 59.964 61.111 4.26 0.00 46.25 3.67
2581 2602 7.324135 TGGTTAATTTCGTCTTAAATTTGTCGC 59.676 33.333 0.00 0.00 39.27 5.19
2586 2607 3.248125 TCGTCTTAAATTTGTCGCGGTTT 59.752 39.130 6.13 3.10 0.00 3.27
2587 2608 3.356658 CGTCTTAAATTTGTCGCGGTTTG 59.643 43.478 6.13 0.00 0.00 2.93
2588 2609 3.118972 GTCTTAAATTTGTCGCGGTTTGC 59.881 43.478 6.13 0.00 41.47 3.68
2589 2610 3.003897 TCTTAAATTTGTCGCGGTTTGCT 59.996 39.130 6.13 0.00 43.27 3.91
2590 2611 2.217429 AAATTTGTCGCGGTTTGCTT 57.783 40.000 6.13 0.00 43.27 3.91
2591 2612 1.766069 AATTTGTCGCGGTTTGCTTC 58.234 45.000 6.13 0.00 43.27 3.86
2592 2613 0.665835 ATTTGTCGCGGTTTGCTTCA 59.334 45.000 6.13 0.00 43.27 3.02
2593 2614 0.665835 TTTGTCGCGGTTTGCTTCAT 59.334 45.000 6.13 0.00 43.27 2.57
2594 2615 0.040514 TTGTCGCGGTTTGCTTCATG 60.041 50.000 6.13 0.00 43.27 3.07
2595 2616 1.163420 TGTCGCGGTTTGCTTCATGT 61.163 50.000 6.13 0.00 43.27 3.21
2596 2617 0.725784 GTCGCGGTTTGCTTCATGTG 60.726 55.000 6.13 0.00 43.27 3.21
2597 2618 1.163420 TCGCGGTTTGCTTCATGTGT 61.163 50.000 6.13 0.00 43.27 3.72
2598 2619 0.317770 CGCGGTTTGCTTCATGTGTT 60.318 50.000 0.00 0.00 43.27 3.32
2602 2623 3.187637 GCGGTTTGCTTCATGTGTTACTA 59.812 43.478 0.00 0.00 41.73 1.82
2629 2658 2.540101 GTGCGCGTAATCTATCTGCTTT 59.460 45.455 8.43 0.00 0.00 3.51
2637 2666 4.725790 AATCTATCTGCTTTGTTTGGCC 57.274 40.909 0.00 0.00 0.00 5.36
2640 2669 3.758554 TCTATCTGCTTTGTTTGGCCTTC 59.241 43.478 3.32 0.00 0.00 3.46
2678 2722 1.822990 CTTAGCCCGAGTCTGTTGGTA 59.177 52.381 0.00 0.00 0.00 3.25
2691 2737 5.654650 AGTCTGTTGGTAATTTGGTGTTTGA 59.345 36.000 0.00 0.00 0.00 2.69
2698 2744 5.186797 TGGTAATTTGGTGTTTGATGGGATC 59.813 40.000 0.00 0.00 0.00 3.36
2711 2757 1.916506 TGGGATCATCTCCGAGCTAG 58.083 55.000 0.00 0.00 46.01 3.42
2717 2763 2.293170 TCATCTCCGAGCTAGAGTGTG 58.707 52.381 11.87 11.72 32.93 3.82
2724 2770 4.981812 TCCGAGCTAGAGTGTGGAATATA 58.018 43.478 0.00 0.00 0.00 0.86
2728 2774 5.921408 CGAGCTAGAGTGTGGAATATAAACC 59.079 44.000 0.00 0.00 0.00 3.27
2750 2797 2.247635 ACTCCTAGATAGTGGGGCTGAA 59.752 50.000 0.00 0.00 0.00 3.02
2859 2930 2.752903 AGGCGAACTGTTGTTGACTTTT 59.247 40.909 0.00 0.00 36.39 2.27
2860 2931 3.105937 GGCGAACTGTTGTTGACTTTTC 58.894 45.455 0.00 0.00 36.39 2.29
2870 2941 3.787785 TGTTGACTTTTCTCGTGTGCTA 58.212 40.909 0.00 0.00 0.00 3.49
2873 2944 3.639538 TGACTTTTCTCGTGTGCTAGTC 58.360 45.455 0.00 0.00 0.00 2.59
2920 2992 5.435686 TTTCTGGGCAATAAGAGAAGCTA 57.564 39.130 0.00 0.00 0.00 3.32
3015 3087 2.572284 GCAGGTAGCGGTTCGACT 59.428 61.111 0.00 0.00 0.00 4.18
3059 3219 5.222631 CAAAACAGCAGATTTGGTTAGGAC 58.777 41.667 4.22 0.00 34.84 3.85
3061 3221 3.679389 ACAGCAGATTTGGTTAGGACAG 58.321 45.455 0.00 0.00 31.36 3.51
3077 3237 2.110967 CAGGCAACCGCTCAGGATG 61.111 63.158 0.00 0.00 44.74 3.51
3262 5167 4.268359 CTTTCCTCTTCCTCTCCCATTTG 58.732 47.826 0.00 0.00 0.00 2.32
3264 5169 1.918957 CCTCTTCCTCTCCCATTTGGT 59.081 52.381 0.00 0.00 34.77 3.67
3265 5170 2.310052 CCTCTTCCTCTCCCATTTGGTT 59.690 50.000 0.00 0.00 34.77 3.67
3267 5172 3.760684 CTCTTCCTCTCCCATTTGGTTTG 59.239 47.826 0.00 0.00 34.77 2.93
3269 5174 4.352595 TCTTCCTCTCCCATTTGGTTTGTA 59.647 41.667 0.00 0.00 34.77 2.41
3270 5175 4.028993 TCCTCTCCCATTTGGTTTGTAC 57.971 45.455 0.00 0.00 34.77 2.90
3271 5176 3.396276 TCCTCTCCCATTTGGTTTGTACA 59.604 43.478 0.00 0.00 34.77 2.90
3274 5179 5.949354 CCTCTCCCATTTGGTTTGTACATTA 59.051 40.000 0.00 0.00 34.77 1.90
3275 5180 6.435904 CCTCTCCCATTTGGTTTGTACATTAA 59.564 38.462 0.00 0.00 34.77 1.40
3277 5182 6.435904 TCTCCCATTTGGTTTGTACATTAAGG 59.564 38.462 0.00 0.00 34.77 2.69
3278 5183 5.046950 TCCCATTTGGTTTGTACATTAAGGC 60.047 40.000 0.00 0.00 34.77 4.35
3280 5185 5.046663 CCATTTGGTTTGTACATTAAGGCCT 60.047 40.000 0.00 0.00 0.00 5.19
3281 5186 5.715434 TTTGGTTTGTACATTAAGGCCTC 57.285 39.130 5.23 0.00 0.00 4.70
3286 5191 5.336451 GGTTTGTACATTAAGGCCTCCTTTG 60.336 44.000 5.23 4.43 41.69 2.77
3287 5192 3.963129 TGTACATTAAGGCCTCCTTTGG 58.037 45.455 5.23 0.00 41.69 3.28
3292 5197 3.322191 TTAAGGCCTCCTTTGGTTTGT 57.678 42.857 5.23 0.00 41.69 2.83
3293 5198 4.456662 TTAAGGCCTCCTTTGGTTTGTA 57.543 40.909 5.23 0.00 41.69 2.41
3294 5199 2.586648 AGGCCTCCTTTGGTTTGTAG 57.413 50.000 0.00 0.00 0.00 2.74
3295 5200 1.075536 AGGCCTCCTTTGGTTTGTAGG 59.924 52.381 0.00 0.00 0.00 3.18
3296 5201 1.074889 GGCCTCCTTTGGTTTGTAGGA 59.925 52.381 0.00 0.00 36.65 2.94
3297 5202 2.490168 GGCCTCCTTTGGTTTGTAGGAA 60.490 50.000 0.00 0.00 37.61 3.36
3299 5204 3.832490 GCCTCCTTTGGTTTGTAGGAATT 59.168 43.478 0.00 0.00 37.61 2.17
3301 5206 5.325239 CCTCCTTTGGTTTGTAGGAATTCT 58.675 41.667 5.23 0.00 37.61 2.40
3302 5207 6.481643 CCTCCTTTGGTTTGTAGGAATTCTA 58.518 40.000 5.23 0.00 37.61 2.10
3303 5208 7.119387 CCTCCTTTGGTTTGTAGGAATTCTAT 58.881 38.462 5.23 0.00 37.61 1.98
3304 5209 8.272173 CCTCCTTTGGTTTGTAGGAATTCTATA 58.728 37.037 5.23 0.00 37.61 1.31
3329 5234 8.922931 AAAATAGGATTTGCAAAGGAAACATT 57.077 26.923 18.19 8.88 0.00 2.71
3331 5236 9.435688 AAATAGGATTTGCAAAGGAAACATTAC 57.564 29.630 18.19 0.00 0.00 1.89
3332 5237 6.670695 AGGATTTGCAAAGGAAACATTACT 57.329 33.333 18.19 0.90 0.00 2.24
3333 5238 7.066307 AGGATTTGCAAAGGAAACATTACTT 57.934 32.000 18.19 0.00 0.00 2.24
3334 5239 7.508687 AGGATTTGCAAAGGAAACATTACTTT 58.491 30.769 18.19 0.00 34.99 2.66
3341 5246 5.468540 AAGGAAACATTACTTTGAAGCCC 57.531 39.130 0.00 0.00 0.00 5.19
3342 5247 4.740902 AGGAAACATTACTTTGAAGCCCT 58.259 39.130 0.00 0.00 0.00 5.19
3343 5248 5.147767 AGGAAACATTACTTTGAAGCCCTT 58.852 37.500 0.00 0.00 0.00 3.95
3344 5249 5.602561 AGGAAACATTACTTTGAAGCCCTTT 59.397 36.000 0.00 0.00 0.00 3.11
3345 5250 5.696270 GGAAACATTACTTTGAAGCCCTTTG 59.304 40.000 0.00 0.00 0.00 2.77
3346 5251 6.462347 GGAAACATTACTTTGAAGCCCTTTGA 60.462 38.462 0.00 0.00 0.00 2.69
3347 5252 6.670695 AACATTACTTTGAAGCCCTTTGAT 57.329 33.333 0.00 0.00 0.00 2.57
3348 5253 6.670695 ACATTACTTTGAAGCCCTTTGATT 57.329 33.333 0.00 0.00 0.00 2.57
3349 5254 7.066307 ACATTACTTTGAAGCCCTTTGATTT 57.934 32.000 0.00 0.00 0.00 2.17
3350 5255 8.189119 ACATTACTTTGAAGCCCTTTGATTTA 57.811 30.769 0.00 0.00 0.00 1.40
3351 5256 8.815912 ACATTACTTTGAAGCCCTTTGATTTAT 58.184 29.630 0.00 0.00 0.00 1.40
3355 5260 8.650143 ACTTTGAAGCCCTTTGATTTATAAGA 57.350 30.769 0.00 0.00 0.00 2.10
3356 5261 9.088987 ACTTTGAAGCCCTTTGATTTATAAGAA 57.911 29.630 0.00 0.00 0.00 2.52
3358 5263 9.874205 TTTGAAGCCCTTTGATTTATAAGAATG 57.126 29.630 0.00 0.00 0.00 2.67
3359 5264 8.010733 TGAAGCCCTTTGATTTATAAGAATGG 57.989 34.615 0.00 0.00 0.00 3.16
3360 5265 7.838696 TGAAGCCCTTTGATTTATAAGAATGGA 59.161 33.333 0.00 0.00 0.00 3.41
3361 5266 8.788238 AAGCCCTTTGATTTATAAGAATGGAT 57.212 30.769 0.00 0.00 0.00 3.41
3362 5267 8.788238 AGCCCTTTGATTTATAAGAATGGATT 57.212 30.769 0.00 0.00 0.00 3.01
3363 5268 8.864087 AGCCCTTTGATTTATAAGAATGGATTC 58.136 33.333 0.00 0.00 37.06 2.52
3405 5310 6.780457 GGAATCAATCCTTCAAATTCTGGA 57.220 37.500 0.00 0.00 45.56 3.86
3406 5311 6.803642 GGAATCAATCCTTCAAATTCTGGAG 58.196 40.000 0.00 0.00 45.56 3.86
3435 5340 7.775053 AAAAACATTAGCCTGACTTAATGGA 57.225 32.000 8.55 0.00 35.04 3.41
3436 5341 7.775053 AAAACATTAGCCTGACTTAATGGAA 57.225 32.000 8.55 0.00 35.04 3.53
3437 5342 7.775053 AAACATTAGCCTGACTTAATGGAAA 57.225 32.000 8.55 0.00 35.04 3.13
3438 5343 7.961326 AACATTAGCCTGACTTAATGGAAAT 57.039 32.000 8.55 0.00 35.04 2.17
3439 5344 7.961326 ACATTAGCCTGACTTAATGGAAATT 57.039 32.000 8.55 0.00 35.04 1.82
3440 5345 7.775120 ACATTAGCCTGACTTAATGGAAATTG 58.225 34.615 8.55 0.00 35.04 2.32
3441 5346 7.397192 ACATTAGCCTGACTTAATGGAAATTGT 59.603 33.333 8.55 0.00 35.04 2.71
3442 5347 7.775053 TTAGCCTGACTTAATGGAAATTGTT 57.225 32.000 0.00 0.00 0.00 2.83
3443 5348 8.871629 TTAGCCTGACTTAATGGAAATTGTTA 57.128 30.769 0.00 0.00 0.00 2.41
3444 5349 7.961326 AGCCTGACTTAATGGAAATTGTTAT 57.039 32.000 0.00 0.00 0.00 1.89
3445 5350 8.000780 AGCCTGACTTAATGGAAATTGTTATC 57.999 34.615 0.00 0.00 0.00 1.75
3446 5351 7.068716 AGCCTGACTTAATGGAAATTGTTATCC 59.931 37.037 0.00 0.00 36.21 2.59
3447 5352 7.068716 GCCTGACTTAATGGAAATTGTTATCCT 59.931 37.037 0.00 0.00 36.64 3.24
3448 5353 9.627123 CCTGACTTAATGGAAATTGTTATCCTA 57.373 33.333 0.00 0.00 36.64 2.94
3451 5356 9.899226 GACTTAATGGAAATTGTTATCCTATGC 57.101 33.333 0.00 0.00 36.64 3.14
3452 5357 9.420118 ACTTAATGGAAATTGTTATCCTATGCA 57.580 29.630 0.00 0.00 36.64 3.96
3453 5358 9.683069 CTTAATGGAAATTGTTATCCTATGCAC 57.317 33.333 0.00 0.00 36.64 4.57
3454 5359 6.655078 ATGGAAATTGTTATCCTATGCACC 57.345 37.500 0.00 0.00 36.64 5.01
3455 5360 5.514169 TGGAAATTGTTATCCTATGCACCA 58.486 37.500 0.00 0.00 36.64 4.17
3456 5361 5.954752 TGGAAATTGTTATCCTATGCACCAA 59.045 36.000 0.00 0.00 36.64 3.67
3457 5362 6.096705 TGGAAATTGTTATCCTATGCACCAAG 59.903 38.462 0.00 0.00 36.64 3.61
3458 5363 6.096846 GGAAATTGTTATCCTATGCACCAAGT 59.903 38.462 0.00 0.00 32.75 3.16
3459 5364 6.455360 AATTGTTATCCTATGCACCAAGTG 57.545 37.500 0.00 0.00 36.51 3.16
3460 5365 4.568072 TGTTATCCTATGCACCAAGTGT 57.432 40.909 0.00 0.00 35.75 3.55
3461 5366 4.513442 TGTTATCCTATGCACCAAGTGTC 58.487 43.478 0.00 0.00 35.75 3.67
3462 5367 4.019771 TGTTATCCTATGCACCAAGTGTCA 60.020 41.667 0.00 0.00 35.75 3.58
3463 5368 3.939740 ATCCTATGCACCAAGTGTCAT 57.060 42.857 0.00 8.80 35.75 3.06
3464 5369 3.266510 TCCTATGCACCAAGTGTCATC 57.733 47.619 0.00 0.00 35.75 2.92
3465 5370 2.840038 TCCTATGCACCAAGTGTCATCT 59.160 45.455 0.00 0.00 35.75 2.90
3466 5371 2.941064 CCTATGCACCAAGTGTCATCTG 59.059 50.000 0.00 4.32 35.75 2.90
3467 5372 2.574006 ATGCACCAAGTGTCATCTGT 57.426 45.000 0.00 0.00 35.75 3.41
3468 5373 2.346766 TGCACCAAGTGTCATCTGTT 57.653 45.000 0.00 0.00 35.75 3.16
3469 5374 2.653726 TGCACCAAGTGTCATCTGTTT 58.346 42.857 0.00 0.00 35.75 2.83
3470 5375 3.023119 TGCACCAAGTGTCATCTGTTTT 58.977 40.909 0.00 0.00 35.75 2.43
3471 5376 3.446873 TGCACCAAGTGTCATCTGTTTTT 59.553 39.130 0.00 0.00 35.75 1.94
3509 5414 6.862711 ATGCATGTCATCTCACTTTCTATG 57.137 37.500 0.00 0.00 0.00 2.23
3510 5415 5.981174 TGCATGTCATCTCACTTTCTATGA 58.019 37.500 0.00 0.00 0.00 2.15
3511 5416 6.589135 TGCATGTCATCTCACTTTCTATGAT 58.411 36.000 0.00 0.00 31.49 2.45
3512 5417 7.052248 TGCATGTCATCTCACTTTCTATGATT 58.948 34.615 0.00 0.00 31.49 2.57
3513 5418 7.555195 TGCATGTCATCTCACTTTCTATGATTT 59.445 33.333 0.00 0.00 31.49 2.17
3514 5419 8.404000 GCATGTCATCTCACTTTCTATGATTTT 58.596 33.333 0.00 0.00 31.49 1.82
3515 5420 9.932699 CATGTCATCTCACTTTCTATGATTTTC 57.067 33.333 0.00 0.00 31.49 2.29
3516 5421 8.498054 TGTCATCTCACTTTCTATGATTTTCC 57.502 34.615 0.00 0.00 31.49 3.13
3517 5422 8.324306 TGTCATCTCACTTTCTATGATTTTCCT 58.676 33.333 0.00 0.00 31.49 3.36
3518 5423 9.823647 GTCATCTCACTTTCTATGATTTTCCTA 57.176 33.333 0.00 0.00 31.49 2.94
3522 5427 9.838339 TCTCACTTTCTATGATTTTCCTATTCC 57.162 33.333 0.00 0.00 0.00 3.01
3523 5428 9.844257 CTCACTTTCTATGATTTTCCTATTCCT 57.156 33.333 0.00 0.00 0.00 3.36
3575 5480 8.972662 TCCTATGATTTCTATCCTATGAACCA 57.027 34.615 0.00 0.00 0.00 3.67
3576 5481 9.392506 TCCTATGATTTCTATCCTATGAACCAA 57.607 33.333 0.00 0.00 0.00 3.67
3579 5484 8.930846 ATGATTTCTATCCTATGAACCAAAGG 57.069 34.615 0.00 0.00 0.00 3.11
3580 5485 8.101309 TGATTTCTATCCTATGAACCAAAGGA 57.899 34.615 0.00 0.00 43.38 3.36
3581 5486 8.213679 TGATTTCTATCCTATGAACCAAAGGAG 58.786 37.037 0.00 0.00 42.53 3.69
3582 5487 6.500589 TTCTATCCTATGAACCAAAGGAGG 57.499 41.667 0.00 0.00 42.53 4.30
3583 5488 3.584733 ATCCTATGAACCAAAGGAGGC 57.415 47.619 0.00 0.00 42.53 4.70
3584 5489 1.564348 TCCTATGAACCAAAGGAGGCC 59.436 52.381 0.00 0.00 34.46 5.19
3593 5498 2.319844 CCAAAGGAGGCCTGAAGTTTT 58.680 47.619 12.00 0.00 32.13 2.43
3619 5524 0.446222 CGCATACCACCTTTTCACGG 59.554 55.000 0.00 0.00 0.00 4.94
3622 5527 0.696501 ATACCACCTTTTCACGGCCT 59.303 50.000 0.00 0.00 0.00 5.19
3657 5562 8.225603 TCAAGCAGACTTAAGTTTTGAAGATT 57.774 30.769 19.46 3.03 33.74 2.40
3670 5575 8.206126 AGTTTTGAAGATTAAATGGGGATGTT 57.794 30.769 0.00 0.00 0.00 2.71
3700 5605 5.508200 AGTACCTAATGAAGAGAAGCGAG 57.492 43.478 0.00 0.00 0.00 5.03
3703 5608 3.118956 ACCTAATGAAGAGAAGCGAGTGG 60.119 47.826 0.00 0.00 0.00 4.00
3880 5785 0.028374 AAAACCGCAACACTACGCAC 59.972 50.000 0.00 0.00 0.00 5.34
3881 5786 0.812412 AAACCGCAACACTACGCACT 60.812 50.000 0.00 0.00 0.00 4.40
3882 5787 0.812412 AACCGCAACACTACGCACTT 60.812 50.000 0.00 0.00 0.00 3.16
3885 5790 1.866925 GCAACACTACGCACTTCCC 59.133 57.895 0.00 0.00 0.00 3.97
3910 5815 5.859495 TCCATGCATACCATAACATCGTAA 58.141 37.500 0.00 0.00 31.47 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.227823 CTGGTTGAGGTTGTCCGCA 60.228 57.895 0.00 0.00 41.53 5.69
1 2 0.818040 AACTGGTTGAGGTTGTCCGC 60.818 55.000 0.00 0.00 39.05 5.54
2 3 1.675552 AAACTGGTTGAGGTTGTCCG 58.324 50.000 0.00 0.00 39.05 4.79
3 4 3.488553 CGAAAAACTGGTTGAGGTTGTCC 60.489 47.826 0.00 0.00 32.39 4.02
4 5 3.128068 ACGAAAAACTGGTTGAGGTTGTC 59.872 43.478 0.00 0.00 32.68 3.18
5 6 3.086282 ACGAAAAACTGGTTGAGGTTGT 58.914 40.909 0.00 0.00 29.31 3.32
6 7 3.434637 CACGAAAAACTGGTTGAGGTTG 58.565 45.455 0.00 0.00 29.31 3.77
7 8 2.425668 CCACGAAAAACTGGTTGAGGTT 59.574 45.455 0.00 0.00 30.38 3.50
8 9 2.021457 CCACGAAAAACTGGTTGAGGT 58.979 47.619 0.00 0.00 0.00 3.85
9 10 1.336755 CCCACGAAAAACTGGTTGAGG 59.663 52.381 0.00 0.00 0.00 3.86
10 11 2.294074 TCCCACGAAAAACTGGTTGAG 58.706 47.619 0.00 0.00 0.00 3.02
11 12 2.421751 TCCCACGAAAAACTGGTTGA 57.578 45.000 0.00 0.00 0.00 3.18
12 13 3.726291 ATTCCCACGAAAAACTGGTTG 57.274 42.857 0.00 0.00 0.00 3.77
13 14 5.536916 TGAATATTCCCACGAAAAACTGGTT 59.463 36.000 12.90 0.00 0.00 3.67
14 15 5.074115 TGAATATTCCCACGAAAAACTGGT 58.926 37.500 12.90 0.00 0.00 4.00
15 16 5.393027 CCTGAATATTCCCACGAAAAACTGG 60.393 44.000 12.90 0.00 0.00 4.00
16 17 5.414454 TCCTGAATATTCCCACGAAAAACTG 59.586 40.000 12.90 0.00 0.00 3.16
17 18 5.566469 TCCTGAATATTCCCACGAAAAACT 58.434 37.500 12.90 0.00 0.00 2.66
18 19 5.890424 TCCTGAATATTCCCACGAAAAAC 57.110 39.130 12.90 0.00 0.00 2.43
19 20 6.183360 CGATTCCTGAATATTCCCACGAAAAA 60.183 38.462 12.90 0.00 0.00 1.94
20 21 5.295787 CGATTCCTGAATATTCCCACGAAAA 59.704 40.000 12.90 0.00 0.00 2.29
21 22 4.814234 CGATTCCTGAATATTCCCACGAAA 59.186 41.667 12.90 0.22 0.00 3.46
22 23 4.141801 ACGATTCCTGAATATTCCCACGAA 60.142 41.667 12.90 8.95 0.00 3.85
23 24 3.386726 ACGATTCCTGAATATTCCCACGA 59.613 43.478 12.90 0.61 0.00 4.35
24 25 3.494626 CACGATTCCTGAATATTCCCACG 59.505 47.826 12.90 11.43 0.00 4.94
25 26 3.815401 CCACGATTCCTGAATATTCCCAC 59.185 47.826 12.90 0.00 0.00 4.61
26 27 3.747388 GCCACGATTCCTGAATATTCCCA 60.747 47.826 12.90 0.00 0.00 4.37
27 28 2.814336 GCCACGATTCCTGAATATTCCC 59.186 50.000 12.90 0.00 0.00 3.97
28 29 3.499918 CAGCCACGATTCCTGAATATTCC 59.500 47.826 12.90 0.00 0.00 3.01
29 30 3.058639 GCAGCCACGATTCCTGAATATTC 60.059 47.826 8.60 8.60 0.00 1.75
30 31 2.880890 GCAGCCACGATTCCTGAATATT 59.119 45.455 0.00 0.00 0.00 1.28
31 32 2.498167 GCAGCCACGATTCCTGAATAT 58.502 47.619 0.00 0.00 0.00 1.28
32 33 1.475034 GGCAGCCACGATTCCTGAATA 60.475 52.381 6.55 0.00 0.00 1.75
33 34 0.749454 GGCAGCCACGATTCCTGAAT 60.749 55.000 6.55 0.00 0.00 2.57
34 35 1.377202 GGCAGCCACGATTCCTGAA 60.377 57.895 6.55 0.00 0.00 3.02
35 36 2.268920 GGCAGCCACGATTCCTGA 59.731 61.111 6.55 0.00 0.00 3.86
36 37 2.825836 GGGCAGCCACGATTCCTG 60.826 66.667 15.19 0.00 0.00 3.86
37 38 3.011517 AGGGCAGCCACGATTCCT 61.012 61.111 15.19 0.00 0.00 3.36
38 39 2.514824 GAGGGCAGCCACGATTCC 60.515 66.667 15.19 0.00 0.00 3.01
39 40 1.377202 TTGAGGGCAGCCACGATTC 60.377 57.895 15.19 3.09 0.00 2.52
40 41 1.675641 GTTGAGGGCAGCCACGATT 60.676 57.895 15.19 0.00 0.00 3.34
41 42 2.045926 GTTGAGGGCAGCCACGAT 60.046 61.111 15.19 0.00 0.00 3.73
42 43 4.329545 GGTTGAGGGCAGCCACGA 62.330 66.667 15.19 3.59 44.10 4.35
48 49 3.292481 ATGGGCTGGTTGAGGGCAG 62.292 63.158 0.00 0.00 0.00 4.85
49 50 3.267233 ATGGGCTGGTTGAGGGCA 61.267 61.111 0.00 0.00 0.00 5.36
50 51 2.440980 GATGGGCTGGTTGAGGGC 60.441 66.667 0.00 0.00 0.00 5.19
51 52 2.276309 GAGGATGGGCTGGTTGAGGG 62.276 65.000 0.00 0.00 0.00 4.30
52 53 1.225704 GAGGATGGGCTGGTTGAGG 59.774 63.158 0.00 0.00 0.00 3.86
53 54 0.179936 GAGAGGATGGGCTGGTTGAG 59.820 60.000 0.00 0.00 0.00 3.02
54 55 1.617018 CGAGAGGATGGGCTGGTTGA 61.617 60.000 0.00 0.00 0.00 3.18
55 56 1.153289 CGAGAGGATGGGCTGGTTG 60.153 63.158 0.00 0.00 0.00 3.77
56 57 1.613630 ACGAGAGGATGGGCTGGTT 60.614 57.895 0.00 0.00 0.00 3.67
57 58 2.039624 ACGAGAGGATGGGCTGGT 59.960 61.111 0.00 0.00 0.00 4.00
58 59 2.801631 GGACGAGAGGATGGGCTGG 61.802 68.421 0.00 0.00 0.00 4.85
59 60 1.617018 TTGGACGAGAGGATGGGCTG 61.617 60.000 0.00 0.00 0.00 4.85
60 61 0.909610 TTTGGACGAGAGGATGGGCT 60.910 55.000 0.00 0.00 0.00 5.19
61 62 0.744771 GTTTGGACGAGAGGATGGGC 60.745 60.000 0.00 0.00 0.00 5.36
62 63 0.613260 TGTTTGGACGAGAGGATGGG 59.387 55.000 0.00 0.00 0.00 4.00
63 64 2.009042 GCTGTTTGGACGAGAGGATGG 61.009 57.143 0.00 0.00 0.00 3.51
64 65 1.066573 AGCTGTTTGGACGAGAGGATG 60.067 52.381 0.00 0.00 0.00 3.51
65 66 1.066573 CAGCTGTTTGGACGAGAGGAT 60.067 52.381 5.25 0.00 0.00 3.24
66 67 0.318441 CAGCTGTTTGGACGAGAGGA 59.682 55.000 5.25 0.00 0.00 3.71
67 68 1.294659 GCAGCTGTTTGGACGAGAGG 61.295 60.000 16.64 0.00 0.00 3.69
68 69 1.294659 GGCAGCTGTTTGGACGAGAG 61.295 60.000 16.64 0.00 0.00 3.20
69 70 1.301716 GGCAGCTGTTTGGACGAGA 60.302 57.895 16.64 0.00 0.00 4.04
70 71 0.957395 ATGGCAGCTGTTTGGACGAG 60.957 55.000 16.64 0.00 0.00 4.18
71 72 0.955428 GATGGCAGCTGTTTGGACGA 60.955 55.000 16.64 0.00 0.00 4.20
72 73 1.503542 GATGGCAGCTGTTTGGACG 59.496 57.895 16.64 0.00 0.00 4.79
73 74 1.598701 GGGATGGCAGCTGTTTGGAC 61.599 60.000 16.64 1.83 0.00 4.02
74 75 1.304381 GGGATGGCAGCTGTTTGGA 60.304 57.895 16.64 0.00 0.00 3.53
75 76 0.034186 TAGGGATGGCAGCTGTTTGG 60.034 55.000 16.64 0.00 0.00 3.28
76 77 1.838112 TTAGGGATGGCAGCTGTTTG 58.162 50.000 16.64 0.00 0.00 2.93
77 78 2.603075 TTTAGGGATGGCAGCTGTTT 57.397 45.000 16.64 0.00 0.00 2.83
78 79 2.603075 TTTTAGGGATGGCAGCTGTT 57.397 45.000 16.64 0.05 0.00 3.16
79 80 2.603075 TTTTTAGGGATGGCAGCTGT 57.397 45.000 16.64 0.00 0.00 4.40
96 97 3.791545 TGGGATAGGGATAGCCACTTTTT 59.208 43.478 0.00 0.00 35.15 1.94
97 98 3.403322 TGGGATAGGGATAGCCACTTTT 58.597 45.455 0.00 0.00 35.15 2.27
98 99 3.074857 TGGGATAGGGATAGCCACTTT 57.925 47.619 0.00 0.00 35.15 2.66
99 100 2.815357 TGGGATAGGGATAGCCACTT 57.185 50.000 0.00 0.00 35.15 3.16
100 101 2.114323 TGATGGGATAGGGATAGCCACT 59.886 50.000 0.00 0.00 35.15 4.00
101 102 2.551270 TGATGGGATAGGGATAGCCAC 58.449 52.381 0.00 0.00 35.15 5.01
102 103 3.014458 AGATGATGGGATAGGGATAGCCA 59.986 47.826 0.00 0.00 35.15 4.75
103 104 3.390639 CAGATGATGGGATAGGGATAGCC 59.609 52.174 0.00 0.00 0.00 3.93
104 105 4.293494 TCAGATGATGGGATAGGGATAGC 58.707 47.826 0.00 0.00 0.00 2.97
105 106 6.211184 GCTATCAGATGATGGGATAGGGATAG 59.789 46.154 5.58 0.00 40.39 2.08
106 107 6.080682 GCTATCAGATGATGGGATAGGGATA 58.919 44.000 5.58 0.00 40.39 2.59
107 108 4.906664 GCTATCAGATGATGGGATAGGGAT 59.093 45.833 5.58 0.00 40.39 3.85
108 109 4.293494 GCTATCAGATGATGGGATAGGGA 58.707 47.826 5.58 0.00 40.39 4.20
109 110 3.390639 GGCTATCAGATGATGGGATAGGG 59.609 52.174 5.58 0.00 40.39 3.53
110 111 4.035814 TGGCTATCAGATGATGGGATAGG 58.964 47.826 5.58 0.00 40.39 2.57
111 112 4.468868 TGTGGCTATCAGATGATGGGATAG 59.531 45.833 5.58 0.00 42.06 2.08
112 113 4.223700 GTGTGGCTATCAGATGATGGGATA 59.776 45.833 5.58 0.00 36.05 2.59
113 114 3.008813 GTGTGGCTATCAGATGATGGGAT 59.991 47.826 5.58 0.00 36.05 3.85
114 115 2.369860 GTGTGGCTATCAGATGATGGGA 59.630 50.000 5.58 0.00 36.05 4.37
115 116 2.105306 TGTGTGGCTATCAGATGATGGG 59.895 50.000 5.58 0.38 36.05 4.00
116 117 3.480505 TGTGTGGCTATCAGATGATGG 57.519 47.619 5.58 3.77 36.05 3.51
117 118 3.562973 GGTTGTGTGGCTATCAGATGATG 59.437 47.826 5.58 0.00 36.05 3.07
118 119 3.200605 TGGTTGTGTGGCTATCAGATGAT 59.799 43.478 0.31 0.31 38.51 2.45
119 120 2.571202 TGGTTGTGTGGCTATCAGATGA 59.429 45.455 0.00 0.00 0.00 2.92
120 121 2.989909 TGGTTGTGTGGCTATCAGATG 58.010 47.619 0.00 0.00 0.00 2.90
121 122 3.719268 TTGGTTGTGTGGCTATCAGAT 57.281 42.857 0.00 0.00 0.00 2.90
122 123 3.146066 GTTTGGTTGTGTGGCTATCAGA 58.854 45.455 0.00 0.00 0.00 3.27
123 124 2.095768 CGTTTGGTTGTGTGGCTATCAG 60.096 50.000 0.00 0.00 0.00 2.90
124 125 1.876799 CGTTTGGTTGTGTGGCTATCA 59.123 47.619 0.00 0.00 0.00 2.15
125 126 1.401018 GCGTTTGGTTGTGTGGCTATC 60.401 52.381 0.00 0.00 0.00 2.08
126 127 0.596082 GCGTTTGGTTGTGTGGCTAT 59.404 50.000 0.00 0.00 0.00 2.97
127 128 1.448922 GGCGTTTGGTTGTGTGGCTA 61.449 55.000 0.00 0.00 0.00 3.93
128 129 2.781158 GGCGTTTGGTTGTGTGGCT 61.781 57.895 0.00 0.00 0.00 4.75
129 130 2.279186 GGCGTTTGGTTGTGTGGC 60.279 61.111 0.00 0.00 0.00 5.01
130 131 1.226831 GTGGCGTTTGGTTGTGTGG 60.227 57.895 0.00 0.00 0.00 4.17
131 132 1.226831 GGTGGCGTTTGGTTGTGTG 60.227 57.895 0.00 0.00 0.00 3.82
132 133 0.107116 TAGGTGGCGTTTGGTTGTGT 60.107 50.000 0.00 0.00 0.00 3.72
133 134 0.309612 GTAGGTGGCGTTTGGTTGTG 59.690 55.000 0.00 0.00 0.00 3.33
134 135 1.161563 CGTAGGTGGCGTTTGGTTGT 61.162 55.000 0.00 0.00 0.00 3.32
135 136 1.572447 CGTAGGTGGCGTTTGGTTG 59.428 57.895 0.00 0.00 0.00 3.77
136 137 4.052519 CGTAGGTGGCGTTTGGTT 57.947 55.556 0.00 0.00 0.00 3.67
149 150 0.178998 TAGTGGCTAGCCTCCCGTAG 60.179 60.000 33.07 0.00 36.94 3.51
150 151 0.481567 ATAGTGGCTAGCCTCCCGTA 59.518 55.000 33.07 18.40 36.94 4.02
151 152 1.115930 CATAGTGGCTAGCCTCCCGT 61.116 60.000 33.07 16.87 36.94 5.28
152 153 1.668294 CATAGTGGCTAGCCTCCCG 59.332 63.158 33.07 16.96 36.94 5.14
153 154 1.124477 AGCATAGTGGCTAGCCTCCC 61.124 60.000 33.07 20.56 43.70 4.30
154 155 0.761802 AAGCATAGTGGCTAGCCTCC 59.238 55.000 33.07 22.98 45.07 4.30
155 156 1.414181 TGAAGCATAGTGGCTAGCCTC 59.586 52.381 33.07 29.04 45.07 4.70
156 157 1.500474 TGAAGCATAGTGGCTAGCCT 58.500 50.000 33.07 17.68 45.07 4.58
157 158 2.421619 GATGAAGCATAGTGGCTAGCC 58.578 52.381 27.71 27.71 45.07 3.93
158 159 2.064762 CGATGAAGCATAGTGGCTAGC 58.935 52.381 6.04 6.04 45.07 3.42
159 160 3.312828 GACGATGAAGCATAGTGGCTAG 58.687 50.000 0.00 0.00 45.07 3.42
160 161 2.287608 CGACGATGAAGCATAGTGGCTA 60.288 50.000 0.00 0.00 45.07 3.93
162 163 0.855349 CGACGATGAAGCATAGTGGC 59.145 55.000 0.00 0.00 30.40 5.01
163 164 1.067060 TCCGACGATGAAGCATAGTGG 59.933 52.381 0.00 0.00 30.40 4.00
164 165 2.033424 TCTCCGACGATGAAGCATAGTG 59.967 50.000 0.00 0.00 30.40 2.74
165 166 2.298610 TCTCCGACGATGAAGCATAGT 58.701 47.619 0.00 0.00 32.75 2.12
166 167 3.240884 CATCTCCGACGATGAAGCATAG 58.759 50.000 0.00 0.00 42.63 2.23
167 168 2.623416 ACATCTCCGACGATGAAGCATA 59.377 45.455 17.16 0.00 42.63 3.14
168 169 1.410517 ACATCTCCGACGATGAAGCAT 59.589 47.619 17.16 0.00 42.63 3.79
169 170 0.817654 ACATCTCCGACGATGAAGCA 59.182 50.000 17.16 0.00 42.63 3.91
170 171 1.482278 GACATCTCCGACGATGAAGC 58.518 55.000 17.16 5.96 42.63 3.86
171 172 1.269309 GGGACATCTCCGACGATGAAG 60.269 57.143 17.16 0.00 42.63 3.02
172 173 0.744874 GGGACATCTCCGACGATGAA 59.255 55.000 17.16 0.00 42.63 2.57
173 174 0.106669 AGGGACATCTCCGACGATGA 60.107 55.000 17.16 0.00 42.63 2.92
174 175 0.031314 CAGGGACATCTCCGACGATG 59.969 60.000 10.96 10.96 44.88 3.84
175 176 0.106669 TCAGGGACATCTCCGACGAT 60.107 55.000 0.00 0.00 37.46 3.73
176 177 1.030488 GTCAGGGACATCTCCGACGA 61.030 60.000 0.00 0.00 37.46 4.20
177 178 1.433879 GTCAGGGACATCTCCGACG 59.566 63.158 0.00 0.00 37.46 5.12
178 179 1.313812 ACGTCAGGGACATCTCCGAC 61.314 60.000 0.00 0.00 37.46 4.79
179 180 0.611062 AACGTCAGGGACATCTCCGA 60.611 55.000 0.00 0.00 37.46 4.55
180 181 0.458543 CAACGTCAGGGACATCTCCG 60.459 60.000 0.00 0.00 37.46 4.63
181 182 0.108138 CCAACGTCAGGGACATCTCC 60.108 60.000 0.00 0.00 35.50 3.71
182 183 0.608640 ACCAACGTCAGGGACATCTC 59.391 55.000 11.23 0.00 32.09 2.75
183 184 0.321671 CACCAACGTCAGGGACATCT 59.678 55.000 11.23 0.00 32.09 2.90
184 185 0.034896 ACACCAACGTCAGGGACATC 59.965 55.000 11.23 0.00 32.09 3.06
185 186 0.472471 AACACCAACGTCAGGGACAT 59.528 50.000 11.23 0.00 32.09 3.06
186 187 0.462937 CAACACCAACGTCAGGGACA 60.463 55.000 11.23 0.00 32.09 4.02
187 188 1.164041 CCAACACCAACGTCAGGGAC 61.164 60.000 11.23 0.00 0.00 4.46
188 189 1.147376 CCAACACCAACGTCAGGGA 59.853 57.895 11.23 0.00 0.00 4.20
189 190 1.896660 CCCAACACCAACGTCAGGG 60.897 63.158 11.23 5.73 0.00 4.45
190 191 1.153046 ACCCAACACCAACGTCAGG 60.153 57.895 5.52 5.52 0.00 3.86
191 192 2.021722 CACCCAACACCAACGTCAG 58.978 57.895 0.00 0.00 0.00 3.51
192 193 2.115911 GCACCCAACACCAACGTCA 61.116 57.895 0.00 0.00 0.00 4.35
193 194 2.719354 GCACCCAACACCAACGTC 59.281 61.111 0.00 0.00 0.00 4.34
194 195 2.831284 GGCACCCAACACCAACGT 60.831 61.111 0.00 0.00 0.00 3.99
195 196 2.830827 TGGCACCCAACACCAACG 60.831 61.111 0.00 0.00 0.00 4.10
196 197 0.827507 ATCTGGCACCCAACACCAAC 60.828 55.000 0.00 0.00 30.80 3.77
197 198 0.827089 CATCTGGCACCCAACACCAA 60.827 55.000 0.00 0.00 30.80 3.67
198 199 1.228521 CATCTGGCACCCAACACCA 60.229 57.895 0.00 0.00 30.80 4.17
199 200 1.978617 CCATCTGGCACCCAACACC 60.979 63.158 0.00 0.00 30.80 4.16
200 201 0.323725 ATCCATCTGGCACCCAACAC 60.324 55.000 0.00 0.00 30.80 3.32
201 202 0.323633 CATCCATCTGGCACCCAACA 60.324 55.000 0.00 0.00 30.80 3.33
202 203 0.323725 ACATCCATCTGGCACCCAAC 60.324 55.000 0.00 0.00 30.80 3.77
203 204 0.323633 CACATCCATCTGGCACCCAA 60.324 55.000 0.00 0.00 30.80 4.12
204 205 1.303948 CACATCCATCTGGCACCCA 59.696 57.895 0.00 0.00 34.44 4.51
205 206 2.123428 GCACATCCATCTGGCACCC 61.123 63.158 0.00 0.00 34.44 4.61
206 207 2.475466 CGCACATCCATCTGGCACC 61.475 63.158 0.00 0.00 34.44 5.01
207 208 3.104766 CGCACATCCATCTGGCAC 58.895 61.111 0.00 0.00 34.44 5.01
208 209 2.825387 GCGCACATCCATCTGGCA 60.825 61.111 0.30 0.00 34.44 4.92
209 210 3.945434 CGCGCACATCCATCTGGC 61.945 66.667 8.75 0.00 34.44 4.85
210 211 1.217585 CTACGCGCACATCCATCTGG 61.218 60.000 5.73 0.00 0.00 3.86
211 212 1.217585 CCTACGCGCACATCCATCTG 61.218 60.000 5.73 0.00 0.00 2.90
212 213 1.068083 CCTACGCGCACATCCATCT 59.932 57.895 5.73 0.00 0.00 2.90
213 214 0.941463 CTCCTACGCGCACATCCATC 60.941 60.000 5.73 0.00 0.00 3.51
214 215 1.068083 CTCCTACGCGCACATCCAT 59.932 57.895 5.73 0.00 0.00 3.41
215 216 2.494445 CTCCTACGCGCACATCCA 59.506 61.111 5.73 0.00 0.00 3.41
216 217 2.279517 CCTCCTACGCGCACATCC 60.280 66.667 5.73 0.00 0.00 3.51
217 218 2.279517 CCCTCCTACGCGCACATC 60.280 66.667 5.73 0.00 0.00 3.06
218 219 4.530857 GCCCTCCTACGCGCACAT 62.531 66.667 5.73 0.00 0.00 3.21
220 221 4.874977 GAGCCCTCCTACGCGCAC 62.875 72.222 5.73 0.00 0.00 5.34
232 233 4.890306 GAGGGGGAGGAGGAGCCC 62.890 77.778 0.00 0.00 43.91 5.19
233 234 4.890306 GGAGGGGGAGGAGGAGCC 62.890 77.778 0.00 0.00 0.00 4.70
234 235 3.767044 GAGGAGGGGGAGGAGGAGC 62.767 73.684 0.00 0.00 0.00 4.70
235 236 2.018086 AGAGGAGGGGGAGGAGGAG 61.018 68.421 0.00 0.00 0.00 3.69
236 237 2.015726 GAGAGGAGGGGGAGGAGGA 61.016 68.421 0.00 0.00 0.00 3.71
237 238 1.673928 ATGAGAGGAGGGGGAGGAGG 61.674 65.000 0.00 0.00 0.00 4.30
238 239 0.178935 GATGAGAGGAGGGGGAGGAG 60.179 65.000 0.00 0.00 0.00 3.69
239 240 1.669927 GGATGAGAGGAGGGGGAGGA 61.670 65.000 0.00 0.00 0.00 3.71
240 241 1.152139 GGATGAGAGGAGGGGGAGG 60.152 68.421 0.00 0.00 0.00 4.30
241 242 0.193069 ATGGATGAGAGGAGGGGGAG 59.807 60.000 0.00 0.00 0.00 4.30
242 243 1.557681 TATGGATGAGAGGAGGGGGA 58.442 55.000 0.00 0.00 0.00 4.81
243 244 2.657355 ATATGGATGAGAGGAGGGGG 57.343 55.000 0.00 0.00 0.00 5.40
244 245 3.027412 CGTATATGGATGAGAGGAGGGG 58.973 54.545 0.00 0.00 0.00 4.79
245 246 2.428890 GCGTATATGGATGAGAGGAGGG 59.571 54.545 0.00 0.00 0.00 4.30
246 247 2.098280 CGCGTATATGGATGAGAGGAGG 59.902 54.545 0.00 0.00 0.00 4.30
247 248 3.010420 TCGCGTATATGGATGAGAGGAG 58.990 50.000 5.77 0.00 0.00 3.69
248 249 3.010420 CTCGCGTATATGGATGAGAGGA 58.990 50.000 5.77 0.00 30.93 3.71
249 250 2.478709 GCTCGCGTATATGGATGAGAGG 60.479 54.545 5.77 0.00 34.05 3.69
250 251 2.162408 TGCTCGCGTATATGGATGAGAG 59.838 50.000 5.77 0.00 35.90 3.20
251 252 2.159382 TGCTCGCGTATATGGATGAGA 58.841 47.619 5.77 0.00 0.00 3.27
252 253 2.636768 TGCTCGCGTATATGGATGAG 57.363 50.000 5.77 0.00 0.00 2.90
253 254 2.755103 AGATGCTCGCGTATATGGATGA 59.245 45.455 5.77 0.00 0.00 2.92
254 255 3.111838 GAGATGCTCGCGTATATGGATG 58.888 50.000 5.77 0.00 0.00 3.51
255 256 2.223363 CGAGATGCTCGCGTATATGGAT 60.223 50.000 5.77 0.00 46.75 3.41
256 257 1.130561 CGAGATGCTCGCGTATATGGA 59.869 52.381 5.77 0.00 46.75 3.41
257 258 1.539341 CGAGATGCTCGCGTATATGG 58.461 55.000 5.77 0.00 46.75 2.74
267 268 1.658095 GCAGAAGTTGACGAGATGCTC 59.342 52.381 0.00 0.00 0.00 4.26
268 269 1.719600 GCAGAAGTTGACGAGATGCT 58.280 50.000 0.00 0.00 0.00 3.79
269 270 0.368227 CGCAGAAGTTGACGAGATGC 59.632 55.000 0.00 0.00 0.00 3.91
270 271 0.994995 CCGCAGAAGTTGACGAGATG 59.005 55.000 0.00 0.00 0.00 2.90
271 272 0.737715 GCCGCAGAAGTTGACGAGAT 60.738 55.000 0.00 0.00 0.00 2.75
272 273 1.372997 GCCGCAGAAGTTGACGAGA 60.373 57.895 0.00 0.00 0.00 4.04
273 274 2.720758 CGCCGCAGAAGTTGACGAG 61.721 63.158 0.00 0.00 0.00 4.18
274 275 2.733218 CGCCGCAGAAGTTGACGA 60.733 61.111 0.00 0.00 0.00 4.20
275 276 3.036084 ACGCCGCAGAAGTTGACG 61.036 61.111 0.00 0.00 0.00 4.35
276 277 2.551270 CACGCCGCAGAAGTTGAC 59.449 61.111 0.00 0.00 0.00 3.18
277 278 3.345808 GCACGCCGCAGAAGTTGA 61.346 61.111 0.00 0.00 41.79 3.18
278 279 2.770587 GAAGCACGCCGCAGAAGTTG 62.771 60.000 0.00 0.00 46.13 3.16
279 280 2.591715 AAGCACGCCGCAGAAGTT 60.592 55.556 0.00 0.00 46.13 2.66
280 281 3.044305 GAAGCACGCCGCAGAAGT 61.044 61.111 0.00 0.00 46.13 3.01
281 282 3.043713 TGAAGCACGCCGCAGAAG 61.044 61.111 0.00 0.00 46.13 2.85
282 283 3.345808 GTGAAGCACGCCGCAGAA 61.346 61.111 0.00 0.00 46.13 3.02
283 284 3.881952 ATGTGAAGCACGCCGCAGA 62.882 57.895 0.00 0.00 46.13 4.26
284 285 3.372676 GATGTGAAGCACGCCGCAG 62.373 63.158 0.00 0.00 46.13 5.18
285 286 3.422303 GATGTGAAGCACGCCGCA 61.422 61.111 0.00 0.00 46.13 5.69
286 287 4.166011 GGATGTGAAGCACGCCGC 62.166 66.667 0.00 0.00 37.14 6.53
287 288 2.741985 TGGATGTGAAGCACGCCG 60.742 61.111 0.00 0.00 37.14 6.46
288 289 2.690778 GGTGGATGTGAAGCACGCC 61.691 63.158 0.00 0.00 37.14 5.68
289 290 1.639298 GAGGTGGATGTGAAGCACGC 61.639 60.000 0.00 0.00 37.14 5.34
290 291 1.021390 GGAGGTGGATGTGAAGCACG 61.021 60.000 0.00 0.00 37.14 5.34
291 292 0.326264 AGGAGGTGGATGTGAAGCAC 59.674 55.000 0.00 0.00 34.56 4.40
292 293 0.325933 CAGGAGGTGGATGTGAAGCA 59.674 55.000 0.00 0.00 0.00 3.91
293 294 1.028868 GCAGGAGGTGGATGTGAAGC 61.029 60.000 0.00 0.00 0.00 3.86
294 295 0.393537 GGCAGGAGGTGGATGTGAAG 60.394 60.000 0.00 0.00 0.00 3.02
295 296 1.685224 GGCAGGAGGTGGATGTGAA 59.315 57.895 0.00 0.00 0.00 3.18
296 297 2.659063 CGGCAGGAGGTGGATGTGA 61.659 63.158 0.00 0.00 0.00 3.58
297 298 2.124983 CGGCAGGAGGTGGATGTG 60.125 66.667 0.00 0.00 0.00 3.21
298 299 2.284625 TCGGCAGGAGGTGGATGT 60.285 61.111 0.00 0.00 0.00 3.06
299 300 2.187946 GTCGGCAGGAGGTGGATG 59.812 66.667 0.00 0.00 0.00 3.51
300 301 3.461773 CGTCGGCAGGAGGTGGAT 61.462 66.667 0.00 0.00 0.00 3.41
301 302 4.671590 TCGTCGGCAGGAGGTGGA 62.672 66.667 0.00 0.00 32.41 4.02
302 303 4.436998 GTCGTCGGCAGGAGGTGG 62.437 72.222 0.00 0.00 32.41 4.61
303 304 4.778415 CGTCGTCGGCAGGAGGTG 62.778 72.222 0.00 0.00 32.41 4.00
305 306 4.477975 GTCGTCGTCGGCAGGAGG 62.478 72.222 0.88 0.00 41.67 4.30
306 307 4.813526 CGTCGTCGTCGGCAGGAG 62.814 72.222 7.52 0.00 42.21 3.69
316 317 4.477975 GGAGGCCAGACGTCGTCG 62.478 72.222 19.11 13.66 37.67 5.12
317 318 4.477975 CGGAGGCCAGACGTCGTC 62.478 72.222 17.70 17.70 33.84 4.20
329 330 2.191513 TCGTAATCGGAGGCGGAGG 61.192 63.158 0.00 0.00 37.69 4.30
330 331 1.008767 GTCGTAATCGGAGGCGGAG 60.009 63.158 0.00 0.00 37.69 4.63
331 332 2.484062 GGTCGTAATCGGAGGCGGA 61.484 63.158 0.00 0.00 37.69 5.54
332 333 2.027169 GGTCGTAATCGGAGGCGG 59.973 66.667 0.00 0.00 37.69 6.13
333 334 2.353145 CGGTCGTAATCGGAGGCG 60.353 66.667 0.00 0.00 37.69 5.52
338 339 1.386525 TTCCTCCCGGTCGTAATCGG 61.387 60.000 0.00 0.00 45.29 4.18
339 340 0.672342 ATTCCTCCCGGTCGTAATCG 59.328 55.000 0.00 0.00 38.55 3.34
340 341 1.335689 CGATTCCTCCCGGTCGTAATC 60.336 57.143 0.00 3.85 0.00 1.75
341 342 0.672342 CGATTCCTCCCGGTCGTAAT 59.328 55.000 0.00 0.00 0.00 1.89
342 343 0.394216 TCGATTCCTCCCGGTCGTAA 60.394 55.000 9.38 0.00 35.71 3.18
343 344 0.816825 CTCGATTCCTCCCGGTCGTA 60.817 60.000 9.38 0.00 35.71 3.43
344 345 2.044650 TCGATTCCTCCCGGTCGT 60.045 61.111 9.38 0.00 35.71 4.34
345 346 2.722487 CTCGATTCCTCCCGGTCG 59.278 66.667 0.00 1.41 35.55 4.79
346 347 0.828343 ATCCTCGATTCCTCCCGGTC 60.828 60.000 0.00 0.00 0.00 4.79
347 348 0.828343 GATCCTCGATTCCTCCCGGT 60.828 60.000 0.00 0.00 0.00 5.28
348 349 0.827925 TGATCCTCGATTCCTCCCGG 60.828 60.000 0.00 0.00 0.00 5.73
349 350 0.315568 GTGATCCTCGATTCCTCCCG 59.684 60.000 0.00 0.00 0.00 5.14
350 351 0.682292 GGTGATCCTCGATTCCTCCC 59.318 60.000 0.00 0.00 0.00 4.30
351 352 1.342819 CAGGTGATCCTCGATTCCTCC 59.657 57.143 0.00 0.00 43.07 4.30
352 353 1.270041 GCAGGTGATCCTCGATTCCTC 60.270 57.143 0.00 0.00 43.07 3.71
353 354 0.755686 GCAGGTGATCCTCGATTCCT 59.244 55.000 0.00 0.00 43.07 3.36
354 355 0.465705 TGCAGGTGATCCTCGATTCC 59.534 55.000 0.00 0.00 43.07 3.01
355 356 1.410517 TCTGCAGGTGATCCTCGATTC 59.589 52.381 15.13 0.00 43.07 2.52
356 357 1.489481 TCTGCAGGTGATCCTCGATT 58.511 50.000 15.13 0.00 43.07 3.34
357 358 1.617850 GATCTGCAGGTGATCCTCGAT 59.382 52.381 15.13 0.00 43.07 3.59
358 359 1.035923 GATCTGCAGGTGATCCTCGA 58.964 55.000 15.13 0.00 43.07 4.04
359 360 3.584586 GATCTGCAGGTGATCCTCG 57.415 57.895 15.13 0.00 43.07 4.63
363 364 1.953138 CGCGGATCTGCAGGTGATC 60.953 63.158 25.69 9.84 39.49 2.92
364 365 2.107750 CGCGGATCTGCAGGTGAT 59.892 61.111 25.69 0.00 34.15 3.06
365 366 3.356639 GACGCGGATCTGCAGGTGA 62.357 63.158 25.69 0.00 34.15 4.02
366 367 2.887568 GACGCGGATCTGCAGGTG 60.888 66.667 25.69 12.01 34.15 4.00
367 368 4.148825 GGACGCGGATCTGCAGGT 62.149 66.667 25.69 16.25 34.15 4.00
368 369 4.899239 GGGACGCGGATCTGCAGG 62.899 72.222 25.69 13.08 34.15 4.85
369 370 4.899239 GGGGACGCGGATCTGCAG 62.899 72.222 25.69 19.39 34.15 4.41
371 372 4.899239 CTGGGGACGCGGATCTGC 62.899 72.222 17.01 17.01 0.00 4.26
372 373 4.899239 GCTGGGGACGCGGATCTG 62.899 72.222 12.47 0.00 0.00 2.90
384 385 4.489771 GATGTGGGGGACGCTGGG 62.490 72.222 0.00 0.00 43.80 4.45
385 386 4.489771 GGATGTGGGGGACGCTGG 62.490 72.222 0.00 0.00 43.80 4.85
386 387 3.391665 GAGGATGTGGGGGACGCTG 62.392 68.421 0.00 0.00 43.80 5.18
387 388 3.083997 GAGGATGTGGGGGACGCT 61.084 66.667 0.00 0.00 43.80 5.07
388 389 2.666596 GATGAGGATGTGGGGGACGC 62.667 65.000 0.00 0.00 43.69 5.19
389 390 1.447643 GATGAGGATGTGGGGGACG 59.552 63.158 0.00 0.00 0.00 4.79
390 391 1.839894 GGATGAGGATGTGGGGGAC 59.160 63.158 0.00 0.00 0.00 4.46
391 392 1.766059 CGGATGAGGATGTGGGGGA 60.766 63.158 0.00 0.00 0.00 4.81
392 393 2.822637 CCGGATGAGGATGTGGGGG 61.823 68.421 0.00 0.00 0.00 5.40
393 394 2.831770 CCGGATGAGGATGTGGGG 59.168 66.667 0.00 0.00 0.00 4.96
394 395 1.987807 AAGCCGGATGAGGATGTGGG 61.988 60.000 5.05 0.00 0.00 4.61
395 396 0.533755 GAAGCCGGATGAGGATGTGG 60.534 60.000 5.05 0.00 0.00 4.17
396 397 0.467384 AGAAGCCGGATGAGGATGTG 59.533 55.000 5.05 0.00 0.00 3.21
397 398 0.755686 GAGAAGCCGGATGAGGATGT 59.244 55.000 5.05 0.00 0.00 3.06
398 399 0.034616 GGAGAAGCCGGATGAGGATG 59.965 60.000 5.05 0.00 0.00 3.51
399 400 0.105246 AGGAGAAGCCGGATGAGGAT 60.105 55.000 5.05 0.00 43.43 3.24
400 401 0.325671 AAGGAGAAGCCGGATGAGGA 60.326 55.000 5.05 0.00 43.43 3.71
401 402 0.105778 GAAGGAGAAGCCGGATGAGG 59.894 60.000 5.05 0.00 43.43 3.86
402 403 1.068434 GAGAAGGAGAAGCCGGATGAG 59.932 57.143 5.05 0.00 43.43 2.90
403 404 1.115467 GAGAAGGAGAAGCCGGATGA 58.885 55.000 5.05 0.00 43.43 2.92
404 405 0.105778 GGAGAAGGAGAAGCCGGATG 59.894 60.000 5.05 0.00 43.43 3.51
405 406 0.031616 AGGAGAAGGAGAAGCCGGAT 60.032 55.000 5.05 0.00 43.43 4.18
406 407 0.684805 GAGGAGAAGGAGAAGCCGGA 60.685 60.000 5.05 0.00 43.43 5.14
407 408 1.681486 GGAGGAGAAGGAGAAGCCGG 61.681 65.000 0.00 0.00 43.43 6.13
408 409 0.686112 AGGAGGAGAAGGAGAAGCCG 60.686 60.000 0.00 0.00 43.43 5.52
409 410 1.119684 GAGGAGGAGAAGGAGAAGCC 58.880 60.000 0.00 0.00 0.00 4.35
410 411 1.119684 GGAGGAGGAGAAGGAGAAGC 58.880 60.000 0.00 0.00 0.00 3.86
411 412 2.666317 GAGGAGGAGGAGAAGGAGAAG 58.334 57.143 0.00 0.00 0.00 2.85
412 413 1.289530 GGAGGAGGAGGAGAAGGAGAA 59.710 57.143 0.00 0.00 0.00 2.87
413 414 0.930726 GGAGGAGGAGGAGAAGGAGA 59.069 60.000 0.00 0.00 0.00 3.71
414 415 0.933700 AGGAGGAGGAGGAGAAGGAG 59.066 60.000 0.00 0.00 0.00 3.69
415 416 0.930726 GAGGAGGAGGAGGAGAAGGA 59.069 60.000 0.00 0.00 0.00 3.36
416 417 0.105709 GGAGGAGGAGGAGGAGAAGG 60.106 65.000 0.00 0.00 0.00 3.46
417 418 0.933700 AGGAGGAGGAGGAGGAGAAG 59.066 60.000 0.00 0.00 0.00 2.85
418 419 1.289530 GAAGGAGGAGGAGGAGGAGAA 59.710 57.143 0.00 0.00 0.00 2.87
419 420 0.930726 GAAGGAGGAGGAGGAGGAGA 59.069 60.000 0.00 0.00 0.00 3.71
420 421 0.933700 AGAAGGAGGAGGAGGAGGAG 59.066 60.000 0.00 0.00 0.00 3.69
428 429 3.031013 GAGGAGAAGAAGAAGGAGGAGG 58.969 54.545 0.00 0.00 0.00 4.30
430 431 2.657459 AGGAGGAGAAGAAGAAGGAGGA 59.343 50.000 0.00 0.00 0.00 3.71
431 432 3.114643 AGGAGGAGAAGAAGAAGGAGG 57.885 52.381 0.00 0.00 0.00 4.30
437 438 3.325135 GGTTGACAAGGAGGAGAAGAAGA 59.675 47.826 0.00 0.00 0.00 2.87
440 441 2.900546 GAGGTTGACAAGGAGGAGAAGA 59.099 50.000 0.00 0.00 0.00 2.87
441 442 2.634940 TGAGGTTGACAAGGAGGAGAAG 59.365 50.000 0.00 0.00 0.00 2.85
442 443 2.689658 TGAGGTTGACAAGGAGGAGAA 58.310 47.619 0.00 0.00 0.00 2.87
443 444 2.398754 TGAGGTTGACAAGGAGGAGA 57.601 50.000 0.00 0.00 0.00 3.71
446 450 3.710209 AGAATGAGGTTGACAAGGAGG 57.290 47.619 0.00 0.00 0.00 4.30
452 456 3.244561 GGTGGAGAAGAATGAGGTTGACA 60.245 47.826 0.00 0.00 0.00 3.58
484 488 1.535444 ACACGGTGGATCCAGTGGA 60.535 57.895 28.37 15.88 41.43 4.02
486 490 1.079127 GGACACGGTGGATCCAGTG 60.079 63.158 25.20 25.20 42.18 3.66
487 491 2.646175 CGGACACGGTGGATCCAGT 61.646 63.158 16.81 9.67 36.18 4.00
500 504 2.363795 CAGGGCTACCTCCGGACA 60.364 66.667 0.00 0.00 46.95 4.02
519 523 3.499737 CGTGAAGCCCGCATCACC 61.500 66.667 16.80 2.99 40.32 4.02
538 543 2.771943 TCCTTGAGTAGATTCGGGCAAT 59.228 45.455 0.00 0.00 0.00 3.56
541 546 1.539280 GCTCCTTGAGTAGATTCGGGC 60.539 57.143 0.00 0.00 31.39 6.13
543 548 2.801342 GCAGCTCCTTGAGTAGATTCGG 60.801 54.545 0.00 0.00 31.39 4.30
544 549 2.159184 TGCAGCTCCTTGAGTAGATTCG 60.159 50.000 0.00 0.00 31.39 3.34
546 551 2.419851 GCTGCAGCTCCTTGAGTAGATT 60.420 50.000 31.33 0.00 38.21 2.40
551 556 2.350514 GGCTGCAGCTCCTTGAGT 59.649 61.111 35.82 0.00 41.70 3.41
567 572 2.901051 ATCTAACGTTGGAGCGCCGG 62.901 60.000 19.43 0.00 36.79 6.13
591 596 2.159226 GCGCTGCCGGATAAGTAGATAT 60.159 50.000 5.05 0.00 34.32 1.63
594 599 1.362717 GCGCTGCCGGATAAGTAGA 59.637 57.895 5.05 0.00 34.32 2.59
607 612 0.391661 AATAGATATGCCCCGCGCTG 60.392 55.000 5.56 0.00 38.78 5.18
608 613 1.137086 CTAATAGATATGCCCCGCGCT 59.863 52.381 5.56 0.00 38.78 5.92
610 615 2.540515 CACTAATAGATATGCCCCGCG 58.459 52.381 0.00 0.00 0.00 6.46
612 617 3.369471 CCACCACTAATAGATATGCCCCG 60.369 52.174 0.00 0.00 0.00 5.73
613 618 3.622455 GCCACCACTAATAGATATGCCCC 60.622 52.174 0.00 0.00 0.00 5.80
617 622 6.111382 CCATCTGCCACCACTAATAGATATG 58.889 44.000 0.00 0.00 0.00 1.78
620 625 3.244700 GCCATCTGCCACCACTAATAGAT 60.245 47.826 0.00 0.00 0.00 1.98
621 626 2.104792 GCCATCTGCCACCACTAATAGA 59.895 50.000 0.00 0.00 0.00 1.98
625 630 1.078497 CGCCATCTGCCACCACTAA 60.078 57.895 0.00 0.00 36.24 2.24
636 641 0.257039 AGCCTTTCCAATCGCCATCT 59.743 50.000 0.00 0.00 0.00 2.90
653 658 3.268103 TTTCCCTTCGGGCCTCAGC 62.268 63.158 0.84 0.00 43.94 4.26
654 659 1.078143 CTTTCCCTTCGGGCCTCAG 60.078 63.158 0.84 0.00 43.94 3.35
655 660 2.602676 CCTTTCCCTTCGGGCCTCA 61.603 63.158 0.84 0.00 43.94 3.86
658 663 2.435120 TTTCCCTTTCCCTTCGGGCC 62.435 60.000 0.00 0.00 43.94 5.80
660 665 1.272480 ACATTTCCCTTTCCCTTCGGG 60.272 52.381 0.00 0.00 46.11 5.14
661 666 1.818674 CACATTTCCCTTTCCCTTCGG 59.181 52.381 0.00 0.00 0.00 4.30
662 667 1.818674 CCACATTTCCCTTTCCCTTCG 59.181 52.381 0.00 0.00 0.00 3.79
671 676 0.909623 CTACCCGTCCACATTTCCCT 59.090 55.000 0.00 0.00 0.00 4.20
672 677 0.906775 TCTACCCGTCCACATTTCCC 59.093 55.000 0.00 0.00 0.00 3.97
990 998 2.282462 AGCGGGGCTTGTTTGGAG 60.282 61.111 0.00 0.00 33.89 3.86
991 999 2.282180 GAGCGGGGCTTGTTTGGA 60.282 61.111 0.00 0.00 39.88 3.53
1092 1104 1.383248 ATCTTACCTGCCCTCGCCT 60.383 57.895 0.00 0.00 0.00 5.52
1131 1143 4.020617 CCTGCACCCTTCCTCGCA 62.021 66.667 0.00 0.00 0.00 5.10
1185 1197 1.067974 CGACCAGTCACACAACCTACA 59.932 52.381 0.00 0.00 0.00 2.74
1186 1198 1.068127 ACGACCAGTCACACAACCTAC 59.932 52.381 0.00 0.00 0.00 3.18
1187 1199 1.405872 ACGACCAGTCACACAACCTA 58.594 50.000 0.00 0.00 0.00 3.08
1188 1200 0.539986 AACGACCAGTCACACAACCT 59.460 50.000 0.00 0.00 0.00 3.50
1204 1216 0.239347 CCTTGAGCCTGCAAGAAACG 59.761 55.000 11.78 0.00 46.31 3.60
1402 1414 5.389516 CGAAACAGGCACAAGATACACTAAC 60.390 44.000 0.00 0.00 0.00 2.34
1408 1420 1.804151 TGCGAAACAGGCACAAGATAC 59.196 47.619 0.00 0.00 35.04 2.24
1559 1571 2.502947 TGCTCACCTAATCACTCAGCAT 59.497 45.455 0.00 0.00 30.57 3.79
1693 1705 8.746052 TTATGTGCAGCTTAGGTATGTTTAAT 57.254 30.769 0.00 0.00 0.00 1.40
1990 2005 6.633500 TTGTAACCTTCACAATTGGAAGAG 57.367 37.500 25.75 20.14 43.46 2.85
2061 2076 2.224621 TGAGTCTTGGCCTTCTTGGAAG 60.225 50.000 3.32 0.00 38.35 3.46
2062 2077 1.774254 TGAGTCTTGGCCTTCTTGGAA 59.226 47.619 3.32 0.00 38.35 3.53
2135 2150 8.351461 CCATCAACCAAAATGCTTAAATGTTTT 58.649 29.630 0.00 0.00 0.00 2.43
2143 2158 7.675062 ACATAAACCATCAACCAAAATGCTTA 58.325 30.769 0.00 0.00 0.00 3.09
2338 2357 6.825721 ACTTCCAAATCTCATCATCTAACACC 59.174 38.462 0.00 0.00 0.00 4.16
2370 2389 1.953772 CCCCCTTAACACACAACGC 59.046 57.895 0.00 0.00 0.00 4.84
2371 2390 1.520600 GGCCCCCTTAACACACAACG 61.521 60.000 0.00 0.00 0.00 4.10
2372 2391 1.183030 GGGCCCCCTTAACACACAAC 61.183 60.000 12.23 0.00 0.00 3.32
2410 2431 5.758784 ACTACTAAGCAACTTCTCAAACCAC 59.241 40.000 0.00 0.00 0.00 4.16
2581 2602 3.896648 AGTAACACATGAAGCAAACCG 57.103 42.857 0.00 0.00 0.00 4.44
2586 2607 5.696270 CACAGAAGTAGTAACACATGAAGCA 59.304 40.000 0.00 0.00 0.00 3.91
2587 2608 5.389935 GCACAGAAGTAGTAACACATGAAGC 60.390 44.000 0.00 0.00 0.00 3.86
2588 2609 5.164051 CGCACAGAAGTAGTAACACATGAAG 60.164 44.000 0.00 0.00 0.00 3.02
2589 2610 4.684242 CGCACAGAAGTAGTAACACATGAA 59.316 41.667 0.00 0.00 0.00 2.57
2590 2611 4.234574 CGCACAGAAGTAGTAACACATGA 58.765 43.478 0.00 0.00 0.00 3.07
2591 2612 3.181530 GCGCACAGAAGTAGTAACACATG 60.182 47.826 0.30 0.00 0.00 3.21
2592 2613 2.993899 GCGCACAGAAGTAGTAACACAT 59.006 45.455 0.30 0.00 0.00 3.21
2593 2614 2.400399 GCGCACAGAAGTAGTAACACA 58.600 47.619 0.30 0.00 0.00 3.72
2594 2615 1.385743 CGCGCACAGAAGTAGTAACAC 59.614 52.381 8.75 0.00 0.00 3.32
2595 2616 1.001048 ACGCGCACAGAAGTAGTAACA 60.001 47.619 5.73 0.00 0.00 2.41
2596 2617 1.694639 ACGCGCACAGAAGTAGTAAC 58.305 50.000 5.73 0.00 0.00 2.50
2597 2618 3.557577 TTACGCGCACAGAAGTAGTAA 57.442 42.857 5.73 1.13 0.00 2.24
2598 2619 3.376234 AGATTACGCGCACAGAAGTAGTA 59.624 43.478 5.73 0.00 0.00 1.82
2602 2623 2.933495 TAGATTACGCGCACAGAAGT 57.067 45.000 5.73 0.00 0.00 3.01
2629 2658 2.489971 CGAGTTACAGAAGGCCAAACA 58.510 47.619 5.01 0.00 0.00 2.83
2637 2666 6.787085 AAGAATTCAACCGAGTTACAGAAG 57.213 37.500 8.44 0.00 0.00 2.85
2640 2669 5.063564 GGCTAAGAATTCAACCGAGTTACAG 59.936 44.000 8.44 0.00 0.00 2.74
2678 2722 5.981174 GATGATCCCATCAAACACCAAATT 58.019 37.500 0.00 0.00 46.48 1.82
2691 2737 2.042297 TCTAGCTCGGAGATGATCCCAT 59.958 50.000 9.69 0.00 46.50 4.00
2698 2744 1.336440 CCACACTCTAGCTCGGAGATG 59.664 57.143 19.36 15.93 33.89 2.90
2701 2747 1.464734 TTCCACACTCTAGCTCGGAG 58.535 55.000 13.11 13.11 36.92 4.63
2728 2774 1.967066 CAGCCCCACTATCTAGGAGTG 59.033 57.143 15.19 15.19 43.32 3.51
2859 2930 0.953960 TCGCAGACTAGCACACGAGA 60.954 55.000 0.00 0.00 0.00 4.04
2860 2931 0.522286 CTCGCAGACTAGCACACGAG 60.522 60.000 10.26 10.26 40.70 4.18
2901 2972 4.712476 ACATAGCTTCTCTTATTGCCCAG 58.288 43.478 0.00 0.00 0.00 4.45
2947 3019 8.509690 CAAATAGATCTTCTCTTGAAGCAAACA 58.490 33.333 0.00 0.00 46.81 2.83
2965 3037 6.481313 CACCATGACGAGATCAACAAATAGAT 59.519 38.462 0.00 0.00 41.93 1.98
3049 3123 0.250553 CGGTTGCCTGTCCTAACCAA 60.251 55.000 0.00 0.00 43.08 3.67
3059 3219 2.110967 CATCCTGAGCGGTTGCCTG 61.111 63.158 0.00 0.00 44.31 4.85
3061 3221 1.153086 ATCATCCTGAGCGGTTGCC 60.153 57.895 0.00 0.00 44.31 4.52
3077 3237 7.932643 AAATCGCGTTATTAATATTCGCATC 57.067 32.000 28.06 12.35 45.77 3.91
3103 3263 1.534175 GGAAGCGTGGACGACTAGATG 60.534 57.143 2.73 0.00 43.02 2.90
3108 3268 1.919956 CTACGGAAGCGTGGACGACT 61.920 60.000 2.73 0.00 43.02 4.18
3262 5167 3.964411 AGGAGGCCTTAATGTACAAACC 58.036 45.455 6.77 0.00 0.00 3.27
3264 5169 4.770010 CCAAAGGAGGCCTTAATGTACAAA 59.230 41.667 6.77 0.00 43.92 2.83
3265 5170 4.202631 ACCAAAGGAGGCCTTAATGTACAA 60.203 41.667 6.77 0.00 43.92 2.41
3267 5172 3.964411 ACCAAAGGAGGCCTTAATGTAC 58.036 45.455 6.77 0.00 43.92 2.90
3269 5174 3.542969 AACCAAAGGAGGCCTTAATGT 57.457 42.857 6.77 0.00 43.92 2.71
3270 5175 3.578282 ACAAACCAAAGGAGGCCTTAATG 59.422 43.478 6.77 4.13 43.92 1.90
3271 5176 3.856900 ACAAACCAAAGGAGGCCTTAAT 58.143 40.909 6.77 0.00 43.92 1.40
3275 5180 1.075536 CCTACAAACCAAAGGAGGCCT 59.924 52.381 3.86 3.86 33.87 5.19
3277 5182 2.579410 TCCTACAAACCAAAGGAGGC 57.421 50.000 0.00 0.00 34.46 4.70
3278 5183 5.325239 AGAATTCCTACAAACCAAAGGAGG 58.675 41.667 0.65 0.00 40.43 4.30
3304 5209 8.922931 AATGTTTCCTTTGCAAATCCTATTTT 57.077 26.923 13.23 0.16 0.00 1.82
3308 5213 7.775053 AGTAATGTTTCCTTTGCAAATCCTA 57.225 32.000 13.23 0.00 0.00 2.94
3309 5214 6.670695 AGTAATGTTTCCTTTGCAAATCCT 57.329 33.333 13.23 0.00 0.00 3.24
3310 5215 7.440856 TCAAAGTAATGTTTCCTTTGCAAATCC 59.559 33.333 13.23 0.00 42.90 3.01
3312 5217 8.729805 TTCAAAGTAATGTTTCCTTTGCAAAT 57.270 26.923 13.23 0.00 42.90 2.32
3313 5218 7.201600 GCTTCAAAGTAATGTTTCCTTTGCAAA 60.202 33.333 12.14 12.14 42.90 3.68
3315 5220 5.752955 GCTTCAAAGTAATGTTTCCTTTGCA 59.247 36.000 6.50 0.00 42.90 4.08
3316 5221 5.177511 GGCTTCAAAGTAATGTTTCCTTTGC 59.822 40.000 6.50 0.00 42.90 3.68
3317 5222 5.696270 GGGCTTCAAAGTAATGTTTCCTTTG 59.304 40.000 0.00 0.00 43.97 2.77
3319 5224 5.147767 AGGGCTTCAAAGTAATGTTTCCTT 58.852 37.500 0.00 0.00 0.00 3.36
3321 5226 5.468540 AAGGGCTTCAAAGTAATGTTTCC 57.531 39.130 0.00 0.00 0.00 3.13
3322 5227 6.512297 TCAAAGGGCTTCAAAGTAATGTTTC 58.488 36.000 0.00 0.00 0.00 2.78
3323 5228 6.478512 TCAAAGGGCTTCAAAGTAATGTTT 57.521 33.333 0.00 0.00 0.00 2.83
3324 5229 6.670695 ATCAAAGGGCTTCAAAGTAATGTT 57.329 33.333 0.00 0.00 0.00 2.71
3329 5234 9.747898 TCTTATAAATCAAAGGGCTTCAAAGTA 57.252 29.630 0.00 0.00 0.00 2.24
3332 5237 9.874205 CATTCTTATAAATCAAAGGGCTTCAAA 57.126 29.630 0.00 0.00 0.00 2.69
3333 5238 8.477256 CCATTCTTATAAATCAAAGGGCTTCAA 58.523 33.333 0.00 0.00 0.00 2.69
3334 5239 7.838696 TCCATTCTTATAAATCAAAGGGCTTCA 59.161 33.333 0.00 0.00 0.00 3.02
3335 5240 8.237811 TCCATTCTTATAAATCAAAGGGCTTC 57.762 34.615 0.00 0.00 0.00 3.86
3336 5241 8.788238 ATCCATTCTTATAAATCAAAGGGCTT 57.212 30.769 0.00 0.00 0.00 4.35
3337 5242 8.788238 AATCCATTCTTATAAATCAAAGGGCT 57.212 30.769 0.00 0.00 0.00 5.19
3338 5243 8.864087 AGAATCCATTCTTATAAATCAAAGGGC 58.136 33.333 0.00 0.00 44.28 5.19
3382 5287 6.183360 CCTCCAGAATTTGAAGGATTGATTCC 60.183 42.308 0.00 0.00 45.85 3.01
3383 5288 6.604795 TCCTCCAGAATTTGAAGGATTGATTC 59.395 38.462 0.00 0.00 0.00 2.52
3384 5289 6.496743 TCCTCCAGAATTTGAAGGATTGATT 58.503 36.000 0.00 0.00 0.00 2.57
3385 5290 6.083487 TCCTCCAGAATTTGAAGGATTGAT 57.917 37.500 0.00 0.00 0.00 2.57
3386 5291 5.519183 TCCTCCAGAATTTGAAGGATTGA 57.481 39.130 0.00 0.00 0.00 2.57
3387 5292 6.594788 TTTCCTCCAGAATTTGAAGGATTG 57.405 37.500 0.00 0.00 33.44 2.67
3388 5293 7.616528 TTTTTCCTCCAGAATTTGAAGGATT 57.383 32.000 0.00 0.00 33.44 3.01
3411 5316 7.775053 TCCATTAAGTCAGGCTAATGTTTTT 57.225 32.000 6.28 0.00 0.00 1.94
3412 5317 7.775053 TTCCATTAAGTCAGGCTAATGTTTT 57.225 32.000 6.28 0.00 0.00 2.43
3413 5318 7.775053 TTTCCATTAAGTCAGGCTAATGTTT 57.225 32.000 6.28 0.00 0.00 2.83
3414 5319 7.961326 ATTTCCATTAAGTCAGGCTAATGTT 57.039 32.000 6.28 0.00 0.00 2.71
3415 5320 7.397192 ACAATTTCCATTAAGTCAGGCTAATGT 59.603 33.333 6.28 0.00 0.00 2.71
3416 5321 7.775120 ACAATTTCCATTAAGTCAGGCTAATG 58.225 34.615 0.85 0.85 0.00 1.90
3417 5322 7.961326 ACAATTTCCATTAAGTCAGGCTAAT 57.039 32.000 0.00 0.00 0.00 1.73
3418 5323 7.775053 AACAATTTCCATTAAGTCAGGCTAA 57.225 32.000 0.00 0.00 0.00 3.09
3419 5324 9.120538 GATAACAATTTCCATTAAGTCAGGCTA 57.879 33.333 0.00 0.00 0.00 3.93
3420 5325 7.068716 GGATAACAATTTCCATTAAGTCAGGCT 59.931 37.037 0.00 0.00 31.99 4.58
3421 5326 7.068716 AGGATAACAATTTCCATTAAGTCAGGC 59.931 37.037 0.00 0.00 34.27 4.85
3422 5327 8.525290 AGGATAACAATTTCCATTAAGTCAGG 57.475 34.615 0.00 0.00 34.27 3.86
3425 5330 9.899226 GCATAGGATAACAATTTCCATTAAGTC 57.101 33.333 0.00 0.00 34.27 3.01
3426 5331 9.420118 TGCATAGGATAACAATTTCCATTAAGT 57.580 29.630 0.00 0.00 34.27 2.24
3427 5332 9.683069 GTGCATAGGATAACAATTTCCATTAAG 57.317 33.333 0.00 0.00 34.27 1.85
3428 5333 8.637986 GGTGCATAGGATAACAATTTCCATTAA 58.362 33.333 0.00 0.00 34.27 1.40
3429 5334 7.782168 TGGTGCATAGGATAACAATTTCCATTA 59.218 33.333 0.00 0.00 34.27 1.90
3430 5335 6.610830 TGGTGCATAGGATAACAATTTCCATT 59.389 34.615 0.00 0.00 34.27 3.16
3431 5336 6.135454 TGGTGCATAGGATAACAATTTCCAT 58.865 36.000 0.00 0.00 34.27 3.41
3432 5337 5.514169 TGGTGCATAGGATAACAATTTCCA 58.486 37.500 0.00 0.00 34.27 3.53
3433 5338 6.096846 ACTTGGTGCATAGGATAACAATTTCC 59.903 38.462 0.00 0.00 0.00 3.13
3434 5339 6.974622 CACTTGGTGCATAGGATAACAATTTC 59.025 38.462 0.00 0.00 0.00 2.17
3435 5340 6.437162 ACACTTGGTGCATAGGATAACAATTT 59.563 34.615 0.00 0.00 36.98 1.82
3436 5341 5.951747 ACACTTGGTGCATAGGATAACAATT 59.048 36.000 0.00 0.00 36.98 2.32
3437 5342 5.509498 ACACTTGGTGCATAGGATAACAAT 58.491 37.500 0.00 0.00 36.98 2.71
3438 5343 4.917385 ACACTTGGTGCATAGGATAACAA 58.083 39.130 0.00 0.00 36.98 2.83
3439 5344 4.019771 TGACACTTGGTGCATAGGATAACA 60.020 41.667 0.00 0.00 36.98 2.41
3440 5345 4.513442 TGACACTTGGTGCATAGGATAAC 58.487 43.478 0.00 0.00 36.98 1.89
3441 5346 4.835284 TGACACTTGGTGCATAGGATAA 57.165 40.909 0.00 0.00 36.98 1.75
3442 5347 4.655649 AGATGACACTTGGTGCATAGGATA 59.344 41.667 0.00 0.00 36.98 2.59
3443 5348 3.457380 AGATGACACTTGGTGCATAGGAT 59.543 43.478 0.00 0.00 36.98 3.24
3444 5349 2.840038 AGATGACACTTGGTGCATAGGA 59.160 45.455 0.00 0.00 36.98 2.94
3445 5350 2.941064 CAGATGACACTTGGTGCATAGG 59.059 50.000 0.00 0.00 36.98 2.57
3446 5351 3.603532 ACAGATGACACTTGGTGCATAG 58.396 45.455 0.00 0.00 36.98 2.23
3447 5352 3.701205 ACAGATGACACTTGGTGCATA 57.299 42.857 0.00 0.00 36.98 3.14
3448 5353 2.574006 ACAGATGACACTTGGTGCAT 57.426 45.000 0.00 3.11 36.98 3.96
3449 5354 2.346766 AACAGATGACACTTGGTGCA 57.653 45.000 0.00 0.00 36.98 4.57
3450 5355 3.715628 AAAACAGATGACACTTGGTGC 57.284 42.857 0.00 0.00 36.98 5.01
3486 5391 6.589135 TCATAGAAAGTGAGATGACATGCAT 58.411 36.000 0.00 0.00 40.77 3.96
3487 5392 5.981174 TCATAGAAAGTGAGATGACATGCA 58.019 37.500 0.00 0.00 0.00 3.96
3488 5393 7.493743 AATCATAGAAAGTGAGATGACATGC 57.506 36.000 0.00 0.00 31.41 4.06
3489 5394 9.932699 GAAAATCATAGAAAGTGAGATGACATG 57.067 33.333 0.00 0.00 31.41 3.21
3490 5395 9.118300 GGAAAATCATAGAAAGTGAGATGACAT 57.882 33.333 0.00 0.00 31.41 3.06
3491 5396 8.324306 AGGAAAATCATAGAAAGTGAGATGACA 58.676 33.333 0.00 0.00 31.41 3.58
3492 5397 8.729805 AGGAAAATCATAGAAAGTGAGATGAC 57.270 34.615 0.00 0.00 31.41 3.06
3496 5401 9.838339 GGAATAGGAAAATCATAGAAAGTGAGA 57.162 33.333 0.00 0.00 0.00 3.27
3497 5402 9.844257 AGGAATAGGAAAATCATAGAAAGTGAG 57.156 33.333 0.00 0.00 0.00 3.51
3549 5454 9.566331 TGGTTCATAGGATAGAAATCATAGGAT 57.434 33.333 0.00 0.00 38.51 3.24
3550 5455 8.972662 TGGTTCATAGGATAGAAATCATAGGA 57.027 34.615 0.00 0.00 37.39 2.94
3554 5459 8.727149 TCCTTTGGTTCATAGGATAGAAATCAT 58.273 33.333 3.54 0.00 36.84 2.45
3555 5460 8.101309 TCCTTTGGTTCATAGGATAGAAATCA 57.899 34.615 3.54 0.00 36.84 2.57
3556 5461 7.663493 CCTCCTTTGGTTCATAGGATAGAAATC 59.337 40.741 7.38 0.00 39.94 2.17
3557 5462 7.521669 CCTCCTTTGGTTCATAGGATAGAAAT 58.478 38.462 7.38 0.00 39.94 2.17
3558 5463 6.634955 GCCTCCTTTGGTTCATAGGATAGAAA 60.635 42.308 7.38 0.00 39.94 2.52
3559 5464 5.163195 GCCTCCTTTGGTTCATAGGATAGAA 60.163 44.000 7.38 0.00 39.94 2.10
3560 5465 4.348168 GCCTCCTTTGGTTCATAGGATAGA 59.652 45.833 7.38 0.00 39.94 1.98
3561 5466 4.505742 GGCCTCCTTTGGTTCATAGGATAG 60.506 50.000 0.00 4.66 39.94 2.08
3562 5467 3.394606 GGCCTCCTTTGGTTCATAGGATA 59.605 47.826 0.00 0.00 39.94 2.59
3563 5468 2.175715 GGCCTCCTTTGGTTCATAGGAT 59.824 50.000 0.00 0.00 39.94 3.24
3564 5469 1.564348 GGCCTCCTTTGGTTCATAGGA 59.436 52.381 0.00 6.86 38.81 2.94
3565 5470 1.566231 AGGCCTCCTTTGGTTCATAGG 59.434 52.381 0.00 0.00 34.61 2.57
3566 5471 2.239654 TCAGGCCTCCTTTGGTTCATAG 59.760 50.000 0.00 0.00 0.00 2.23
3567 5472 2.274542 TCAGGCCTCCTTTGGTTCATA 58.725 47.619 0.00 0.00 0.00 2.15
3568 5473 1.075601 TCAGGCCTCCTTTGGTTCAT 58.924 50.000 0.00 0.00 0.00 2.57
3569 5474 0.850100 TTCAGGCCTCCTTTGGTTCA 59.150 50.000 0.00 0.00 0.00 3.18
3570 5475 1.202940 ACTTCAGGCCTCCTTTGGTTC 60.203 52.381 0.00 0.00 0.00 3.62
3571 5476 0.853530 ACTTCAGGCCTCCTTTGGTT 59.146 50.000 0.00 0.00 0.00 3.67
3572 5477 0.853530 AACTTCAGGCCTCCTTTGGT 59.146 50.000 0.00 0.00 0.00 3.67
3573 5478 2.001076 AAACTTCAGGCCTCCTTTGG 57.999 50.000 0.00 0.00 0.00 3.28
3593 5498 4.580995 TGAAAAGGTGGTATGCGAGAAAAA 59.419 37.500 0.00 0.00 0.00 1.94
3605 5510 1.228154 GAGGCCGTGAAAAGGTGGT 60.228 57.895 0.00 0.00 37.98 4.16
3657 5562 7.612633 GGTACTTCAGTTTAACATCCCCATTTA 59.387 37.037 0.00 0.00 0.00 1.40
3700 5605 5.283457 AGCTAACTCTTGGATCATACCAC 57.717 43.478 0.00 0.00 39.85 4.16
3782 5687 9.823647 ACACTCTGTATAAGATTACATCAAAGG 57.176 33.333 0.00 0.00 33.29 3.11
3865 5770 1.491563 GAAGTGCGTAGTGTTGCGG 59.508 57.895 0.00 0.00 32.69 5.69
3875 5780 2.671070 CATGGAGGGGAAGTGCGT 59.329 61.111 0.00 0.00 0.00 5.24
3877 5782 0.183492 TATGCATGGAGGGGAAGTGC 59.817 55.000 10.16 0.00 36.39 4.40
3880 5785 0.846015 TGGTATGCATGGAGGGGAAG 59.154 55.000 10.16 0.00 0.00 3.46
3881 5786 1.533187 ATGGTATGCATGGAGGGGAA 58.467 50.000 10.16 0.00 0.00 3.97
3882 5787 2.375174 GTTATGGTATGCATGGAGGGGA 59.625 50.000 10.16 0.00 0.00 4.81
3885 5790 3.686241 CGATGTTATGGTATGCATGGAGG 59.314 47.826 10.16 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.