Multiple sequence alignment - TraesCS6B01G270700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G270700 chr6B 100.000 3946 0 0 1 3946 487544041 487547986 0.000000e+00 7287.0
1 TraesCS6B01G270700 chr6B 100.000 3547 0 0 4330 7876 487548370 487551916 0.000000e+00 6551.0
2 TraesCS6B01G270700 chr6B 95.803 548 15 3 6066 6611 349666640 349666099 0.000000e+00 878.0
3 TraesCS6B01G270700 chr6B 95.438 548 17 3 6066 6611 378091346 378091887 0.000000e+00 867.0
4 TraesCS6B01G270700 chr6B 94.343 548 23 5 6066 6611 303162106 303162647 0.000000e+00 833.0
5 TraesCS6B01G270700 chr6B 91.444 561 43 5 4371 4930 658651707 658651151 0.000000e+00 765.0
6 TraesCS6B01G270700 chr6B 90.034 592 56 3 4338 4928 216472019 216471430 0.000000e+00 763.0
7 TraesCS6B01G270700 chr6B 94.845 194 8 1 5079 5270 460497981 460498174 1.280000e-77 302.0
8 TraesCS6B01G270700 chr6B 94.271 192 9 1 5079 5270 29348590 29348779 7.730000e-75 292.0
9 TraesCS6B01G270700 chr6B 93.367 196 9 2 5079 5270 460496433 460496628 3.600000e-73 287.0
10 TraesCS6B01G270700 chr6B 92.708 192 12 1 5079 5270 177735984 177736173 7.790000e-70 276.0
11 TraesCS6B01G270700 chr6B 97.500 160 3 1 4926 5085 29348914 29348756 1.010000e-68 272.0
12 TraesCS6B01G270700 chr6B 98.065 155 2 1 4931 5085 460496758 460496605 1.300000e-67 268.0
13 TraesCS6B01G270700 chr6B 98.387 62 1 0 3831 3892 460498275 460498214 8.360000e-20 110.0
14 TraesCS6B01G270700 chr6B 98.361 61 1 0 3832 3892 460496728 460496668 3.010000e-19 108.0
15 TraesCS6B01G270700 chr6B 98.361 61 1 0 3832 3892 487549001 487549061 3.010000e-19 108.0
16 TraesCS6B01G270700 chr6A 89.992 2368 128 45 987 3287 472363056 472360731 0.000000e+00 2959.0
17 TraesCS6B01G270700 chr6A 92.770 1549 65 16 5690 7233 472359326 472357820 0.000000e+00 2196.0
18 TraesCS6B01G270700 chr6A 92.349 562 26 8 3285 3829 472360650 472360089 0.000000e+00 784.0
19 TraesCS6B01G270700 chr6A 93.902 328 15 1 5278 5605 472360091 472359769 2.550000e-134 490.0
20 TraesCS6B01G270700 chr6A 85.743 491 32 20 7299 7770 472357401 472356930 1.190000e-132 484.0
21 TraesCS6B01G270700 chr6A 95.714 140 4 2 5611 5749 472359463 472359325 2.860000e-54 224.0
22 TraesCS6B01G270700 chr6A 92.437 119 7 1 834 952 472363178 472363062 1.360000e-37 169.0
23 TraesCS6B01G270700 chr6D 91.551 2154 100 17 807 2895 332813828 332811692 0.000000e+00 2894.0
24 TraesCS6B01G270700 chr6D 92.180 1803 85 22 5278 7065 332810457 332808696 0.000000e+00 2497.0
25 TraesCS6B01G270700 chr6D 93.828 956 39 7 2890 3829 332811406 332810455 0.000000e+00 1421.0
26 TraesCS6B01G270700 chr6D 90.104 192 7 5 7416 7606 332808164 332807984 1.020000e-58 239.0
27 TraesCS6B01G270700 chr6D 92.701 137 10 0 7634 7770 332807889 332807753 1.730000e-46 198.0
28 TraesCS6B01G270700 chr6D 91.566 83 5 2 7299 7381 332808308 332808228 6.460000e-21 113.0
29 TraesCS6B01G270700 chr4B 96.049 810 30 1 1 810 615311848 615312655 0.000000e+00 1317.0
30 TraesCS6B01G270700 chr4B 96.923 65 2 0 3828 3892 103819678 103819742 8.360000e-20 110.0
31 TraesCS6B01G270700 chr3B 96.035 807 30 1 1 807 720896391 720897195 0.000000e+00 1312.0
32 TraesCS6B01G270700 chr3B 91.054 816 57 8 1 807 540199456 540198648 0.000000e+00 1088.0
33 TraesCS6B01G270700 chr3B 96.875 160 4 1 4926 5085 435859173 435859331 4.690000e-67 267.0
34 TraesCS6B01G270700 chr3B 98.387 62 1 0 3831 3892 663136271 663136210 8.360000e-20 110.0
35 TraesCS6B01G270700 chr7B 95.203 813 35 2 1 810 109039356 109040167 0.000000e+00 1282.0
36 TraesCS6B01G270700 chr7B 95.364 755 25 7 1 754 254117543 254116798 0.000000e+00 1192.0
37 TraesCS6B01G270700 chr7B 88.127 817 69 16 1 810 2953728 2952933 0.000000e+00 946.0
38 TraesCS6B01G270700 chr7B 90.619 565 48 2 4366 4929 605881382 605881942 0.000000e+00 745.0
39 TraesCS6B01G270700 chr7B 93.750 192 10 1 5079 5270 384193583 384193394 3.600000e-73 287.0
40 TraesCS6B01G270700 chr7B 97.531 162 2 2 4925 5085 384199674 384199834 7.790000e-70 276.0
41 TraesCS6B01G270700 chr7B 93.103 145 7 3 4923 5065 91194702 91194845 8.010000e-50 209.0
42 TraesCS6B01G270700 chr1B 95.303 809 36 1 1 809 667266487 667265681 0.000000e+00 1282.0
43 TraesCS6B01G270700 chr1B 92.840 810 34 3 1 810 486850788 486851573 0.000000e+00 1153.0
44 TraesCS6B01G270700 chr1B 93.229 192 11 1 5079 5270 119123265 119123076 1.670000e-71 281.0
45 TraesCS6B01G270700 chr1B 98.710 155 1 1 4931 5085 236994540 236994387 2.800000e-69 274.0
46 TraesCS6B01G270700 chr1B 97.436 156 2 2 4931 5085 279180237 279180083 1.690000e-66 265.0
47 TraesCS6B01G270700 chr1B 96.552 87 3 0 7790 7876 327486103 327486017 2.290000e-30 145.0
48 TraesCS6B01G270700 chr1B 98.361 61 1 0 3832 3892 236996262 236996202 3.010000e-19 108.0
49 TraesCS6B01G270700 chr1D 88.206 814 80 13 1 809 423280327 423281129 0.000000e+00 957.0
50 TraesCS6B01G270700 chr1D 92.958 71 4 1 3823 3892 19799365 19799435 1.400000e-17 102.0
51 TraesCS6B01G270700 chr5B 93.805 565 34 1 4366 4930 105695394 105694831 0.000000e+00 848.0
52 TraesCS6B01G270700 chr5B 94.271 192 7 2 5079 5270 105695395 105695582 2.780000e-74 291.0
53 TraesCS6B01G270700 chr5B 98.065 155 2 1 4931 5085 105694154 105694001 1.300000e-67 268.0
54 TraesCS6B01G270700 chr5B 95.652 161 6 1 4925 5085 448439787 448439946 2.820000e-64 257.0
55 TraesCS6B01G270700 chr5B 93.182 44 2 1 3127 3170 672192100 672192058 6.600000e-06 63.9
56 TraesCS6B01G270700 chr4A 93.881 523 31 1 4408 4930 235653251 235652730 0.000000e+00 787.0
57 TraesCS6B01G270700 chr5A 93.690 523 31 2 4408 4930 239405624 239405104 0.000000e+00 782.0
58 TraesCS6B01G270700 chr5A 96.273 161 4 2 4926 5085 399310244 399310403 6.060000e-66 263.0
59 TraesCS6B01G270700 chr3D 93.690 523 31 2 4408 4930 168497976 168497456 0.000000e+00 782.0
60 TraesCS6B01G270700 chr3D 94.340 53 3 0 7790 7842 256096646 256096698 1.820000e-11 82.4
61 TraesCS6B01G270700 chr7D 93.499 523 33 1 4408 4930 295315469 295314948 0.000000e+00 776.0
62 TraesCS6B01G270700 chr7D 94.048 84 5 0 7790 7873 147415281 147415364 2.310000e-25 128.0
63 TraesCS6B01G270700 chr3A 93.333 525 33 1 4408 4930 309346255 309346779 0.000000e+00 774.0
64 TraesCS6B01G270700 chrUn 93.846 195 9 1 5079 5270 156528543 156528737 2.780000e-74 291.0
65 TraesCS6B01G270700 chrUn 93.750 192 10 1 5079 5270 50237418 50237229 3.600000e-73 287.0
66 TraesCS6B01G270700 chrUn 98.361 61 1 0 3832 3892 31750096 31750036 3.010000e-19 108.0
67 TraesCS6B01G270700 chr4D 92.045 88 5 2 7790 7876 29659946 29659860 1.070000e-23 122.0
68 TraesCS6B01G270700 chr4D 96.825 63 1 1 3831 3892 291949966 291949904 3.890000e-18 104.0
69 TraesCS6B01G270700 chr4D 87.209 86 8 3 7791 7876 498678792 498678874 2.340000e-15 95.3
70 TraesCS6B01G270700 chr2D 89.655 87 8 1 7790 7876 116809592 116809507 8.360000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G270700 chr6B 487544041 487551916 7875 False 4648.666667 7287 99.453667 1 7876 3 chr6B.!!$F6 7875
1 TraesCS6B01G270700 chr6B 349666099 349666640 541 True 878.000000 878 95.803000 6066 6611 1 chr6B.!!$R3 545
2 TraesCS6B01G270700 chr6B 378091346 378091887 541 False 867.000000 867 95.438000 6066 6611 1 chr6B.!!$F4 545
3 TraesCS6B01G270700 chr6B 303162106 303162647 541 False 833.000000 833 94.343000 6066 6611 1 chr6B.!!$F3 545
4 TraesCS6B01G270700 chr6B 658651151 658651707 556 True 765.000000 765 91.444000 4371 4930 1 chr6B.!!$R4 559
5 TraesCS6B01G270700 chr6B 216471430 216472019 589 True 763.000000 763 90.034000 4338 4928 1 chr6B.!!$R2 590
6 TraesCS6B01G270700 chr6B 460496433 460498174 1741 False 294.500000 302 94.106000 5079 5270 2 chr6B.!!$F5 191
7 TraesCS6B01G270700 chr6A 472356930 472363178 6248 True 1043.714286 2959 91.843857 834 7770 7 chr6A.!!$R1 6936
8 TraesCS6B01G270700 chr6D 332807753 332813828 6075 True 1227.000000 2894 91.988333 807 7770 6 chr6D.!!$R1 6963
9 TraesCS6B01G270700 chr4B 615311848 615312655 807 False 1317.000000 1317 96.049000 1 810 1 chr4B.!!$F2 809
10 TraesCS6B01G270700 chr3B 720896391 720897195 804 False 1312.000000 1312 96.035000 1 807 1 chr3B.!!$F2 806
11 TraesCS6B01G270700 chr3B 540198648 540199456 808 True 1088.000000 1088 91.054000 1 807 1 chr3B.!!$R1 806
12 TraesCS6B01G270700 chr7B 109039356 109040167 811 False 1282.000000 1282 95.203000 1 810 1 chr7B.!!$F2 809
13 TraesCS6B01G270700 chr7B 254116798 254117543 745 True 1192.000000 1192 95.364000 1 754 1 chr7B.!!$R2 753
14 TraesCS6B01G270700 chr7B 2952933 2953728 795 True 946.000000 946 88.127000 1 810 1 chr7B.!!$R1 809
15 TraesCS6B01G270700 chr7B 605881382 605881942 560 False 745.000000 745 90.619000 4366 4929 1 chr7B.!!$F4 563
16 TraesCS6B01G270700 chr1B 667265681 667266487 806 True 1282.000000 1282 95.303000 1 809 1 chr1B.!!$R4 808
17 TraesCS6B01G270700 chr1B 486850788 486851573 785 False 1153.000000 1153 92.840000 1 810 1 chr1B.!!$F1 809
18 TraesCS6B01G270700 chr1D 423280327 423281129 802 False 957.000000 957 88.206000 1 809 1 chr1D.!!$F2 808
19 TraesCS6B01G270700 chr5B 105694001 105695394 1393 True 558.000000 848 95.935000 4366 5085 2 chr5B.!!$R2 719
20 TraesCS6B01G270700 chr4A 235652730 235653251 521 True 787.000000 787 93.881000 4408 4930 1 chr4A.!!$R1 522
21 TraesCS6B01G270700 chr5A 239405104 239405624 520 True 782.000000 782 93.690000 4408 4930 1 chr5A.!!$R1 522
22 TraesCS6B01G270700 chr3D 168497456 168497976 520 True 782.000000 782 93.690000 4408 4930 1 chr3D.!!$R1 522
23 TraesCS6B01G270700 chr7D 295314948 295315469 521 True 776.000000 776 93.499000 4408 4930 1 chr7D.!!$R1 522
24 TraesCS6B01G270700 chr3A 309346255 309346779 524 False 774.000000 774 93.333000 4408 4930 1 chr3A.!!$F1 522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
700 728 0.027455 GTGCGCGTGCTGCATTATAA 59.973 50.0 23.16 0.0 46.97 0.98 F
974 1003 0.035056 AATTCCCACTGCCCTTCGAG 60.035 55.0 0.00 0.0 0.00 4.04 F
1273 1311 0.039617 CGCGCCTGGTCAATTTGAAA 60.040 50.0 0.00 0.0 0.00 2.69 F
3103 3528 0.600057 CCCTGTTTGCTTGCCTCTTC 59.400 55.0 0.00 0.0 0.00 2.87 F
3927 4452 0.478507 CTCTCTCTCTCCCTCCCTCC 59.521 65.0 0.00 0.0 0.00 4.30 F
5493 6706 0.250467 CCCATGCCCGTCATCCTTAG 60.250 60.0 0.00 0.0 31.79 2.18 F
6776 8421 0.038166 GGGTGCCTGTTGGATCTTCA 59.962 55.0 0.00 0.0 34.57 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2143 2268 1.003464 TCAGAACTATGGCTGCTTGCA 59.997 47.619 0.00 0.00 45.15 4.08 R
2249 2374 2.231235 CACCCTTCCCATTTGTTACTGC 59.769 50.000 0.00 0.00 0.00 4.40 R
3129 3554 1.477195 CCTCTCCCTGACCCTAGTACG 60.477 61.905 0.00 0.00 0.00 3.67 R
4369 4894 0.243907 GCGTTGTCTCAGGCTGTAGA 59.756 55.000 15.27 12.81 0.00 2.59 R
5603 6816 0.102481 TAACATCCTCTCTTCGCCGC 59.898 55.000 0.00 0.00 0.00 6.53 R
6821 8466 0.179029 CCTTGACACAAAGACGGGGT 60.179 55.000 0.00 0.00 0.00 4.95 R
7628 9689 0.035820 GGTCGGTATTCACCAAGCCA 60.036 55.000 0.00 0.00 46.14 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 8.528643 ACGTACAATTATGGCTATTATCTAGCA 58.471 33.333 6.58 0.00 42.06 3.49
133 139 4.654915 TCTTGATTTCCACAATGCTCAGA 58.345 39.130 0.00 0.00 0.00 3.27
209 220 1.568504 ATTGTGAGAGGACCGGCTAA 58.431 50.000 0.00 0.00 0.00 3.09
280 291 2.282407 TGCACAACATGATCATCGAGG 58.718 47.619 4.86 0.00 0.00 4.63
291 302 1.037579 TCATCGAGGATGAGCGTGGT 61.038 55.000 0.00 0.00 43.11 4.16
295 306 0.389817 CGAGGATGAGCGTGGTCAAA 60.390 55.000 5.79 0.00 0.00 2.69
615 633 7.935338 TGTTTGATCATTTTTGCTCTTCTTC 57.065 32.000 0.00 0.00 0.00 2.87
700 728 0.027455 GTGCGCGTGCTGCATTATAA 59.973 50.000 23.16 0.00 46.97 0.98
810 838 1.939255 GCTGTTGGAGATGCTCTAAGC 59.061 52.381 0.00 0.00 42.82 3.09
811 839 2.200067 CTGTTGGAGATGCTCTAAGCG 58.800 52.381 0.00 0.00 46.26 4.68
812 840 0.933796 GTTGGAGATGCTCTAAGCGC 59.066 55.000 0.00 0.00 46.26 5.92
813 841 0.179073 TTGGAGATGCTCTAAGCGCC 60.179 55.000 2.29 0.00 46.26 6.53
814 842 1.045350 TGGAGATGCTCTAAGCGCCT 61.045 55.000 2.29 0.00 46.26 5.52
837 866 8.080153 CCTTACTTAAGCATCCAACAATGGGG 62.080 46.154 1.29 0.00 38.36 4.96
863 892 5.007921 GCCTCTACACTTTGTTTACGGAAAA 59.992 40.000 0.00 0.00 0.00 2.29
865 894 7.130269 CCTCTACACTTTGTTTACGGAAAAAG 58.870 38.462 0.00 0.00 36.06 2.27
889 918 0.100146 GATACGCCTTCGAAGTCGGT 59.900 55.000 29.29 21.27 40.29 4.69
890 919 0.529378 ATACGCCTTCGAAGTCGGTT 59.471 50.000 29.29 15.21 40.29 4.44
902 931 1.065358 AGTCGGTTTACGTGCATTCG 58.935 50.000 0.00 0.00 44.69 3.34
972 1001 0.527565 CAAATTCCCACTGCCCTTCG 59.472 55.000 0.00 0.00 0.00 3.79
973 1002 0.404040 AAATTCCCACTGCCCTTCGA 59.596 50.000 0.00 0.00 0.00 3.71
974 1003 0.035056 AATTCCCACTGCCCTTCGAG 60.035 55.000 0.00 0.00 0.00 4.04
991 1021 1.066573 CGAGGCTTGGACTCAACAGAT 60.067 52.381 1.23 0.00 37.60 2.90
1155 1193 4.233635 CGCTACGACTACCGCGCT 62.234 66.667 5.56 0.00 43.32 5.92
1173 1211 1.305887 TTCGGGTTCCCTCCTCCTC 60.306 63.158 6.31 0.00 0.00 3.71
1216 1254 4.415150 CCTGCCCCATCAGTGCGT 62.415 66.667 0.00 0.00 32.32 5.24
1230 1268 2.268920 GCGTGCCCTCCTTCATGA 59.731 61.111 0.00 0.00 0.00 3.07
1233 1271 1.271054 GCGTGCCCTCCTTCATGATAT 60.271 52.381 0.00 0.00 0.00 1.63
1273 1311 0.039617 CGCGCCTGGTCAATTTGAAA 60.040 50.000 0.00 0.00 0.00 2.69
1285 1323 5.299531 GGTCAATTTGAAAGATACCTAGGGC 59.700 44.000 14.81 1.83 0.00 5.19
1367 1405 4.680110 CGAGTTCTTTTATCACGACACACT 59.320 41.667 0.00 0.00 0.00 3.55
1407 1466 4.729868 AGTTGTGGTTCCATTTTCTAGCT 58.270 39.130 0.00 0.00 0.00 3.32
1408 1467 5.876357 AGTTGTGGTTCCATTTTCTAGCTA 58.124 37.500 0.00 0.00 0.00 3.32
1409 1468 5.940470 AGTTGTGGTTCCATTTTCTAGCTAG 59.060 40.000 15.01 15.01 0.00 3.42
1428 1487 6.266323 AGCTAGTGTTATGAGTGTTATGTCG 58.734 40.000 0.00 0.00 0.00 4.35
1521 1632 6.163476 GTGACACTACTGGACATACATTGAA 58.837 40.000 0.00 0.00 0.00 2.69
1628 1739 9.561069 AGCAAAGTAATATTTAGTAGGTGGATG 57.439 33.333 0.00 0.00 0.00 3.51
1654 1765 4.445453 TGCAGCTGTTGTATGATAAGAGG 58.555 43.478 16.64 0.00 0.00 3.69
1658 1769 6.344500 CAGCTGTTGTATGATAAGAGGACTT 58.656 40.000 5.25 0.00 39.81 3.01
1981 2097 2.356135 CCTGCAATGTACGGCTACTTT 58.644 47.619 5.72 0.00 0.00 2.66
2013 2129 2.089201 TCTTCATGATGCTGCACTTGG 58.911 47.619 3.57 0.00 0.00 3.61
2077 2202 7.886970 TGAACTTACAGTGTACTAGGACATACT 59.113 37.037 11.91 1.23 0.00 2.12
2078 2203 7.862512 ACTTACAGTGTACTAGGACATACTC 57.137 40.000 11.91 0.00 0.00 2.59
2080 2205 8.766476 ACTTACAGTGTACTAGGACATACTCTA 58.234 37.037 11.91 0.00 0.00 2.43
2082 2207 6.955364 ACAGTGTACTAGGACATACTCTACA 58.045 40.000 11.91 0.00 0.00 2.74
2083 2208 7.575505 ACAGTGTACTAGGACATACTCTACAT 58.424 38.462 11.91 0.00 0.00 2.29
2084 2209 8.053963 ACAGTGTACTAGGACATACTCTACATT 58.946 37.037 11.91 0.00 0.00 2.71
2085 2210 8.904834 CAGTGTACTAGGACATACTCTACATTT 58.095 37.037 11.91 0.00 0.00 2.32
2087 2212 9.122779 GTGTACTAGGACATACTCTACATTTCT 57.877 37.037 11.91 0.00 0.00 2.52
2088 2213 9.121658 TGTACTAGGACATACTCTACATTTCTG 57.878 37.037 2.78 0.00 0.00 3.02
2089 2214 7.045126 ACTAGGACATACTCTACATTTCTGC 57.955 40.000 0.00 0.00 0.00 4.26
2090 2215 5.939764 AGGACATACTCTACATTTCTGCA 57.060 39.130 0.00 0.00 0.00 4.41
2091 2216 6.299805 AGGACATACTCTACATTTCTGCAA 57.700 37.500 0.00 0.00 0.00 4.08
2092 2217 6.109359 AGGACATACTCTACATTTCTGCAAC 58.891 40.000 0.00 0.00 0.00 4.17
2093 2218 6.070538 AGGACATACTCTACATTTCTGCAACT 60.071 38.462 0.00 0.00 0.00 3.16
2094 2219 6.595716 GGACATACTCTACATTTCTGCAACTT 59.404 38.462 0.00 0.00 0.00 2.66
2095 2220 7.764443 GGACATACTCTACATTTCTGCAACTTA 59.236 37.037 0.00 0.00 0.00 2.24
2124 2249 9.941325 TGGAAATATGTTGACATAAAAGCATTT 57.059 25.926 7.82 4.47 41.60 2.32
2174 2299 6.012745 AGCCATAGTTCTGAAAACTTGGAAT 58.987 36.000 16.41 7.07 33.88 3.01
2184 2309 8.408043 TCTGAAAACTTGGAATCATGTGTTAT 57.592 30.769 0.00 0.00 31.21 1.89
2228 2353 4.437682 AAAATATTCTCCGAGGCATCCA 57.562 40.909 0.00 0.00 0.00 3.41
2249 2374 8.869897 CATCCAAAATTGAACATTCAGAAGATG 58.130 33.333 0.00 0.00 38.61 2.90
2252 2377 7.148639 CCAAAATTGAACATTCAGAAGATGCAG 60.149 37.037 0.00 0.00 38.61 4.41
2282 2407 1.648467 GAAGGGTGATGCGCCAGAAC 61.648 60.000 4.18 0.00 35.42 3.01
2284 2409 3.134127 GGTGATGCGCCAGAACCC 61.134 66.667 4.18 0.00 33.65 4.11
2343 2468 4.148079 CCATGCTAGATCTAGAGGTGTCA 58.852 47.826 30.06 18.15 35.21 3.58
2344 2469 4.586421 CCATGCTAGATCTAGAGGTGTCAA 59.414 45.833 30.06 7.41 35.21 3.18
2345 2470 5.245751 CCATGCTAGATCTAGAGGTGTCAAT 59.754 44.000 30.06 9.08 35.21 2.57
2346 2471 5.781210 TGCTAGATCTAGAGGTGTCAATG 57.219 43.478 30.06 3.66 35.21 2.82
2347 2472 5.204292 TGCTAGATCTAGAGGTGTCAATGT 58.796 41.667 30.06 0.00 35.21 2.71
2348 2473 5.300539 TGCTAGATCTAGAGGTGTCAATGTC 59.699 44.000 30.06 10.30 35.21 3.06
2427 2559 4.457949 TGCATCATAATAGGCAGCATTGAG 59.542 41.667 0.00 0.00 0.00 3.02
2574 2706 4.002906 TGTTCAGATGCTTACCGAAGTT 57.997 40.909 0.00 0.00 34.90 2.66
2672 2804 5.238006 AGTCATACTGCTAGAACGAAGAC 57.762 43.478 0.00 0.00 0.00 3.01
2787 2921 4.952460 AGCTTTGCATTTTGTTCACTGAT 58.048 34.783 0.00 0.00 0.00 2.90
2982 3407 8.970020 AGTATGATGGAAAAATGCTTATGACAA 58.030 29.630 0.00 0.00 0.00 3.18
3027 3452 6.427853 TGACAGTATTGACAACCTTGATTCAG 59.572 38.462 0.00 0.00 0.00 3.02
3071 3496 3.550437 ATCTCAATCCTGTGTAGTGGC 57.450 47.619 0.00 0.00 0.00 5.01
3087 3512 3.591789 AGTGGCTGTGTATCATATCCCT 58.408 45.455 0.00 0.00 0.00 4.20
3089 3514 3.071602 GTGGCTGTGTATCATATCCCTGT 59.928 47.826 0.00 0.00 0.00 4.00
3103 3528 0.600057 CCCTGTTTGCTTGCCTCTTC 59.400 55.000 0.00 0.00 0.00 2.87
3104 3529 1.613836 CCTGTTTGCTTGCCTCTTCT 58.386 50.000 0.00 0.00 0.00 2.85
3117 3542 6.425210 TTGCCTCTTCTGTATATATGCTGT 57.575 37.500 2.37 0.00 0.00 4.40
3140 3565 7.596494 TGTATAATACATTGCGTACTAGGGTC 58.404 38.462 0.00 0.00 32.89 4.46
3327 3840 5.413309 AAACTAGTGAGAGAGTTGGGATG 57.587 43.478 0.00 0.00 36.05 3.51
3372 3885 8.574251 TGGCTTGTACTTTCATACATAAACAT 57.426 30.769 0.00 0.00 35.04 2.71
3386 3899 9.208022 CATACATAAACATATCTGTAGTGTGGG 57.792 37.037 6.42 0.00 33.36 4.61
3406 3920 2.305009 GCCAGAGCATTAGAAAGGCAT 58.695 47.619 0.00 0.00 40.29 4.40
3507 4021 6.928348 TTCAAGAAATGGAGGTAGTAGTGA 57.072 37.500 0.00 0.00 0.00 3.41
3635 4160 8.887717 CAGTAATCTTGTCCTGAAAATCTAAGG 58.112 37.037 0.00 0.00 0.00 2.69
3715 4240 5.182001 CCCTATTCAGGAAACTTGTGTTCTG 59.818 44.000 0.00 0.00 45.91 3.02
3724 4249 4.965119 AACTTGTGTTCTGTCAGAAACC 57.035 40.909 16.86 10.63 35.75 3.27
3769 4294 2.550180 GTTGTTCCTGGACTTCTTCAGC 59.450 50.000 0.00 0.00 0.00 4.26
3776 4301 4.532126 TCCTGGACTTCTTCAGCAATAAGA 59.468 41.667 0.00 0.00 0.00 2.10
3808 4333 5.608437 AGATGAGCCTATCAAGGTGGATAAA 59.392 40.000 1.23 0.00 45.64 1.40
3827 4352 9.899661 TGGATAAAATTGCACTACTTATACTGT 57.100 29.630 0.00 0.00 0.00 3.55
3832 4357 9.677567 AAAATTGCACTACTTATACTGTTGTTG 57.322 29.630 0.00 0.00 0.00 3.33
3833 4358 7.979444 ATTGCACTACTTATACTGTTGTTGT 57.021 32.000 0.00 0.00 0.00 3.32
3834 4359 7.795482 TTGCACTACTTATACTGTTGTTGTT 57.205 32.000 0.00 0.00 0.00 2.83
3835 4360 7.184800 TGCACTACTTATACTGTTGTTGTTG 57.815 36.000 0.00 0.00 0.00 3.33
3836 4361 6.203915 TGCACTACTTATACTGTTGTTGTTGG 59.796 38.462 0.00 0.00 0.00 3.77
3837 4362 6.425721 GCACTACTTATACTGTTGTTGTTGGA 59.574 38.462 0.00 0.00 0.00 3.53
3838 4363 7.360101 GCACTACTTATACTGTTGTTGTTGGAG 60.360 40.741 0.00 0.00 0.00 3.86
3839 4364 7.656137 CACTACTTATACTGTTGTTGTTGGAGT 59.344 37.037 0.00 0.00 0.00 3.85
3840 4365 8.863086 ACTACTTATACTGTTGTTGTTGGAGTA 58.137 33.333 0.00 0.00 0.00 2.59
3841 4366 7.958053 ACTTATACTGTTGTTGTTGGAGTAC 57.042 36.000 0.00 0.00 0.00 2.73
3842 4367 6.643770 ACTTATACTGTTGTTGTTGGAGTACG 59.356 38.462 0.00 0.00 0.00 3.67
3843 4368 3.255969 ACTGTTGTTGTTGGAGTACGT 57.744 42.857 0.00 0.00 0.00 3.57
3844 4369 4.389890 ACTGTTGTTGTTGGAGTACGTA 57.610 40.909 0.00 0.00 0.00 3.57
3845 4370 4.757594 ACTGTTGTTGTTGGAGTACGTAA 58.242 39.130 0.00 0.00 0.00 3.18
3846 4371 5.362263 ACTGTTGTTGTTGGAGTACGTAAT 58.638 37.500 0.00 0.00 0.00 1.89
3847 4372 5.235616 ACTGTTGTTGTTGGAGTACGTAATG 59.764 40.000 0.00 0.00 0.00 1.90
3848 4373 4.512198 TGTTGTTGTTGGAGTACGTAATGG 59.488 41.667 0.00 0.00 0.00 3.16
3849 4374 3.068560 TGTTGTTGGAGTACGTAATGGC 58.931 45.455 0.00 0.00 0.00 4.40
3850 4375 2.389962 TGTTGGAGTACGTAATGGCC 57.610 50.000 0.00 0.00 0.00 5.36
3851 4376 1.903860 TGTTGGAGTACGTAATGGCCT 59.096 47.619 3.32 0.00 0.00 5.19
3852 4377 3.098377 TGTTGGAGTACGTAATGGCCTA 58.902 45.455 3.32 0.00 0.00 3.93
3853 4378 3.514706 TGTTGGAGTACGTAATGGCCTAA 59.485 43.478 3.32 0.00 0.00 2.69
3854 4379 4.162698 TGTTGGAGTACGTAATGGCCTAAT 59.837 41.667 3.32 0.00 0.00 1.73
3855 4380 4.330944 TGGAGTACGTAATGGCCTAATG 57.669 45.455 3.32 0.00 0.00 1.90
3856 4381 3.070446 TGGAGTACGTAATGGCCTAATGG 59.930 47.826 3.32 0.00 0.00 3.16
3857 4382 3.556423 GGAGTACGTAATGGCCTAATGGG 60.556 52.174 3.32 0.00 38.36 4.00
3866 4391 2.196776 CCTAATGGGCCTGGGCTG 59.803 66.667 20.47 5.64 41.60 4.85
3867 4392 2.196776 CTAATGGGCCTGGGCTGG 59.803 66.667 20.47 0.00 41.60 4.85
3874 4399 3.556306 GCCTGGGCTGGCGGTATA 61.556 66.667 4.12 0.00 43.74 1.47
3875 4400 2.743718 CCTGGGCTGGCGGTATAG 59.256 66.667 0.00 0.00 0.00 1.31
3876 4401 2.031163 CTGGGCTGGCGGTATAGC 59.969 66.667 0.00 0.00 39.17 2.97
3889 4414 4.416505 CGGTATAGCCCGTTAGTCTTAG 57.583 50.000 0.00 0.00 43.07 2.18
3890 4415 3.190118 CGGTATAGCCCGTTAGTCTTAGG 59.810 52.174 0.00 0.00 43.07 2.69
3891 4416 3.509184 GGTATAGCCCGTTAGTCTTAGGG 59.491 52.174 0.00 0.00 46.44 3.53
3895 4420 1.777941 CCCGTTAGTCTTAGGGCTCT 58.222 55.000 0.00 0.00 37.07 4.09
3896 4421 1.682323 CCCGTTAGTCTTAGGGCTCTC 59.318 57.143 0.00 0.00 37.07 3.20
3897 4422 2.657143 CCGTTAGTCTTAGGGCTCTCT 58.343 52.381 0.00 0.00 0.00 3.10
3898 4423 2.619646 CCGTTAGTCTTAGGGCTCTCTC 59.380 54.545 0.00 0.00 0.00 3.20
3899 4424 3.547746 CGTTAGTCTTAGGGCTCTCTCT 58.452 50.000 0.00 0.00 0.00 3.10
3900 4425 3.562557 CGTTAGTCTTAGGGCTCTCTCTC 59.437 52.174 0.00 0.00 0.00 3.20
3901 4426 4.685030 CGTTAGTCTTAGGGCTCTCTCTCT 60.685 50.000 0.00 0.00 0.00 3.10
3902 4427 3.577805 AGTCTTAGGGCTCTCTCTCTC 57.422 52.381 0.00 0.00 0.00 3.20
3903 4428 3.123273 AGTCTTAGGGCTCTCTCTCTCT 58.877 50.000 0.00 0.00 0.00 3.10
3904 4429 3.136626 AGTCTTAGGGCTCTCTCTCTCTC 59.863 52.174 0.00 0.00 0.00 3.20
3905 4430 3.136626 GTCTTAGGGCTCTCTCTCTCTCT 59.863 52.174 0.00 0.00 0.00 3.10
3906 4431 3.391296 TCTTAGGGCTCTCTCTCTCTCTC 59.609 52.174 0.00 0.00 0.00 3.20
3907 4432 1.898863 AGGGCTCTCTCTCTCTCTCT 58.101 55.000 0.00 0.00 0.00 3.10
3908 4433 1.771255 AGGGCTCTCTCTCTCTCTCTC 59.229 57.143 0.00 0.00 0.00 3.20
3909 4434 1.771255 GGGCTCTCTCTCTCTCTCTCT 59.229 57.143 0.00 0.00 0.00 3.10
3910 4435 2.224402 GGGCTCTCTCTCTCTCTCTCTC 60.224 59.091 0.00 0.00 0.00 3.20
3911 4436 2.703007 GGCTCTCTCTCTCTCTCTCTCT 59.297 54.545 0.00 0.00 0.00 3.10
3912 4437 3.244044 GGCTCTCTCTCTCTCTCTCTCTC 60.244 56.522 0.00 0.00 0.00 3.20
3913 4438 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
3914 4439 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
3915 4440 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
3916 4441 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3917 4442 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3918 4443 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3919 4444 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
3920 4445 3.309296 TCTCTCTCTCTCTCTCTCTCCC 58.691 54.545 0.00 0.00 0.00 4.30
3921 4446 3.051803 TCTCTCTCTCTCTCTCTCTCCCT 60.052 52.174 0.00 0.00 0.00 4.20
3922 4447 3.309296 TCTCTCTCTCTCTCTCTCCCTC 58.691 54.545 0.00 0.00 0.00 4.30
3923 4448 2.370189 CTCTCTCTCTCTCTCTCCCTCC 59.630 59.091 0.00 0.00 0.00 4.30
3924 4449 1.421646 CTCTCTCTCTCTCTCCCTCCC 59.578 61.905 0.00 0.00 0.00 4.30
3925 4450 1.010793 TCTCTCTCTCTCTCCCTCCCT 59.989 57.143 0.00 0.00 0.00 4.20
3926 4451 1.421646 CTCTCTCTCTCTCCCTCCCTC 59.578 61.905 0.00 0.00 0.00 4.30
3927 4452 0.478507 CTCTCTCTCTCCCTCCCTCC 59.521 65.000 0.00 0.00 0.00 4.30
3928 4453 0.996762 TCTCTCTCTCCCTCCCTCCC 60.997 65.000 0.00 0.00 0.00 4.30
3929 4454 0.998945 CTCTCTCTCCCTCCCTCCCT 60.999 65.000 0.00 0.00 0.00 4.20
3930 4455 0.996762 TCTCTCTCCCTCCCTCCCTC 60.997 65.000 0.00 0.00 0.00 4.30
3931 4456 2.015726 TCTCTCCCTCCCTCCCTCC 61.016 68.421 0.00 0.00 0.00 4.30
3932 4457 3.036959 TCTCCCTCCCTCCCTCCC 61.037 72.222 0.00 0.00 0.00 4.30
3933 4458 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
3934 4459 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
3935 4460 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
3936 4461 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
3937 4462 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
3938 4463 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
3939 4464 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
3940 4465 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
3941 4466 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
3942 4467 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
3943 4468 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
3944 4469 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
3945 4470 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
4358 4883 4.003788 CGCCGACCACACCTTCCT 62.004 66.667 0.00 0.00 0.00 3.36
4359 4884 2.047179 GCCGACCACACCTTCCTC 60.047 66.667 0.00 0.00 0.00 3.71
4361 4886 2.214216 CCGACCACACCTTCCTCCA 61.214 63.158 0.00 0.00 0.00 3.86
4362 4887 1.004918 CGACCACACCTTCCTCCAC 60.005 63.158 0.00 0.00 0.00 4.02
4363 4888 1.004918 GACCACACCTTCCTCCACG 60.005 63.158 0.00 0.00 0.00 4.94
4364 4889 1.755393 GACCACACCTTCCTCCACGT 61.755 60.000 0.00 0.00 0.00 4.49
4369 4894 1.152312 ACCTTCCTCCACGTCACCT 60.152 57.895 0.00 0.00 0.00 4.00
4375 4900 0.811915 CCTCCACGTCACCTCTACAG 59.188 60.000 0.00 0.00 0.00 2.74
4384 4909 1.075536 TCACCTCTACAGCCTGAGACA 59.924 52.381 0.00 0.00 32.44 3.41
4458 4983 0.769873 GATCATGTCCAGCCCTCCAT 59.230 55.000 0.00 0.00 0.00 3.41
4517 5042 1.891919 GCCACCAGCGTCTTTGTCA 60.892 57.895 0.00 0.00 0.00 3.58
4644 5169 1.094073 GCAGATGACAGCCGCAATCT 61.094 55.000 0.00 0.00 0.00 2.40
4655 5180 1.668751 GCCGCAATCTTGGAATTACGA 59.331 47.619 0.00 0.00 28.85 3.43
4733 5258 3.324930 CAGCAGCCACCTCCTCCA 61.325 66.667 0.00 0.00 0.00 3.86
4760 5285 2.754375 CAACAACGGCTACCCCCT 59.246 61.111 0.00 0.00 0.00 4.79
4933 6142 2.434359 CGCTTCCGACTTGGGGAC 60.434 66.667 0.00 0.00 38.76 4.46
5104 6313 3.329542 GATGGCGTGGAGGAAGGCA 62.330 63.158 0.00 0.00 42.68 4.75
5215 6428 4.137543 CCTAAGGAAGCCGAGCAAATATT 58.862 43.478 0.00 0.00 0.00 1.28
5493 6706 0.250467 CCCATGCCCGTCATCCTTAG 60.250 60.000 0.00 0.00 31.79 2.18
5534 6747 2.345782 TACATCCTTGGGTGGTACCA 57.654 50.000 11.60 11.60 41.02 3.25
5593 6806 1.344114 GGGAGCTCTCAGCCTCATAAG 59.656 57.143 14.64 0.00 43.77 1.73
5599 6812 2.362397 CTCTCAGCCTCATAAGCGGTTA 59.638 50.000 9.85 9.85 34.64 2.85
5601 6814 3.005897 TCTCAGCCTCATAAGCGGTTATC 59.994 47.826 16.63 6.32 34.64 1.75
5602 6815 2.061773 CAGCCTCATAAGCGGTTATCG 58.938 52.381 16.63 12.27 42.76 2.92
5603 6816 1.000955 AGCCTCATAAGCGGTTATCGG 59.999 52.381 16.63 18.76 39.69 4.18
5618 7134 3.905678 CGGCGGCGAAGAGAGGAT 61.906 66.667 29.19 0.00 0.00 3.24
5657 7173 5.422331 TCTTCTGGGTTGATAGGTTACTCAG 59.578 44.000 0.00 0.00 40.86 3.35
5748 7323 5.281314 ACCTCTTGGAACTAGGACATGTAT 58.719 41.667 0.00 0.00 37.04 2.29
5823 7398 5.403766 CCAATCTGCTGCTAACTAAGATACG 59.596 44.000 0.00 0.00 0.00 3.06
6035 7612 6.645306 TGACCACAAGATTATCCGTATTTCA 58.355 36.000 0.00 0.00 0.00 2.69
6037 7614 7.773224 TGACCACAAGATTATCCGTATTTCATT 59.227 33.333 0.00 0.00 0.00 2.57
6297 7874 9.916397 CCTTCAGTAATTTGTTATAGTTTAGCG 57.084 33.333 0.00 0.00 0.00 4.26
6370 8012 7.428826 CAAGGACTGAAAATTTTAGAACAGCT 58.571 34.615 14.17 5.12 0.00 4.24
6510 8154 7.595819 TTAATTTCACCATGTTTCACTTCCT 57.404 32.000 0.00 0.00 0.00 3.36
6611 8256 6.017357 TCGCGATATGTCAAGTAGAACACTAT 60.017 38.462 3.71 0.00 36.04 2.12
6776 8421 0.038166 GGGTGCCTGTTGGATCTTCA 59.962 55.000 0.00 0.00 34.57 3.02
6779 8424 2.079925 GTGCCTGTTGGATCTTCAGTC 58.920 52.381 0.00 0.00 34.57 3.51
6821 8466 1.402456 GCTGAACTCGTCTCGGCTAAA 60.402 52.381 7.44 0.00 41.22 1.85
6824 8469 0.245813 AACTCGTCTCGGCTAAACCC 59.754 55.000 0.00 0.00 33.26 4.11
6869 8514 7.254852 TGGTGTCTGATACAAAAACAAAGAAC 58.745 34.615 6.87 0.00 40.63 3.01
6953 8606 1.466856 GATCTTGTTGGGCATGCTCA 58.533 50.000 18.52 18.52 0.00 4.26
6954 8607 2.029623 GATCTTGTTGGGCATGCTCAT 58.970 47.619 23.51 4.60 0.00 2.90
6999 8652 2.570442 TCCACAAACAAAGAAACGGC 57.430 45.000 0.00 0.00 0.00 5.68
7075 8728 1.695242 TCCCGTTCTTTGAGGTTAGCA 59.305 47.619 0.00 0.00 0.00 3.49
7099 8752 5.643664 TCTTATCGTTTTTCTAGCGTGCTA 58.356 37.500 1.07 1.07 0.00 3.49
7117 8770 2.159693 GCTACAGCGTCAAAGCTTAACC 60.160 50.000 0.00 0.00 46.80 2.85
7118 8771 1.961793 ACAGCGTCAAAGCTTAACCA 58.038 45.000 0.00 0.00 46.80 3.67
7138 8794 5.754782 ACCAACTTGCTGGATATGATTGTA 58.245 37.500 0.00 0.00 38.96 2.41
7141 8797 7.143340 CCAACTTGCTGGATATGATTGTATTG 58.857 38.462 0.00 0.00 38.96 1.90
7201 8857 6.909550 TGGGCAATTCAGTAAACTAACAAT 57.090 33.333 0.00 0.00 0.00 2.71
7233 8915 3.455910 CCTATTGGGGAGAAGTGATGACA 59.544 47.826 0.00 0.00 0.00 3.58
7236 8918 5.715439 ATTGGGGAGAAGTGATGACAATA 57.285 39.130 0.00 0.00 0.00 1.90
7241 8923 4.276926 GGGAGAAGTGATGACAATAATGCC 59.723 45.833 0.00 0.00 0.00 4.40
7242 8924 4.024556 GGAGAAGTGATGACAATAATGCCG 60.025 45.833 0.00 0.00 0.00 5.69
7268 8953 1.535444 TTGACGAGGCCCTCTTGGA 60.535 57.895 9.52 0.00 35.39 3.53
7273 8958 1.045350 CGAGGCCCTCTTGGATGAGA 61.045 60.000 9.52 0.00 36.23 3.27
7280 8965 2.502947 CCCTCTTGGATGAGATGTGTGA 59.497 50.000 0.00 0.00 36.23 3.58
7281 8966 3.136077 CCCTCTTGGATGAGATGTGTGAT 59.864 47.826 0.00 0.00 36.23 3.06
7283 8968 4.383880 CCTCTTGGATGAGATGTGTGATGT 60.384 45.833 0.00 0.00 36.23 3.06
7284 8969 4.510571 TCTTGGATGAGATGTGTGATGTG 58.489 43.478 0.00 0.00 0.00 3.21
7285 8970 3.986996 TGGATGAGATGTGTGATGTGT 57.013 42.857 0.00 0.00 0.00 3.72
7286 8971 3.602483 TGGATGAGATGTGTGATGTGTG 58.398 45.455 0.00 0.00 0.00 3.82
7287 8972 3.008266 TGGATGAGATGTGTGATGTGTGT 59.992 43.478 0.00 0.00 0.00 3.72
7288 8973 3.373130 GGATGAGATGTGTGATGTGTGTG 59.627 47.826 0.00 0.00 0.00 3.82
7289 8974 2.769893 TGAGATGTGTGATGTGTGTGG 58.230 47.619 0.00 0.00 0.00 4.17
7291 8976 1.167851 GATGTGTGATGTGTGTGGGG 58.832 55.000 0.00 0.00 0.00 4.96
7292 8977 0.478072 ATGTGTGATGTGTGTGGGGT 59.522 50.000 0.00 0.00 0.00 4.95
7293 8978 1.132500 TGTGTGATGTGTGTGGGGTA 58.868 50.000 0.00 0.00 0.00 3.69
7294 8979 1.702401 TGTGTGATGTGTGTGGGGTAT 59.298 47.619 0.00 0.00 0.00 2.73
7295 8980 2.290008 TGTGTGATGTGTGTGGGGTATC 60.290 50.000 0.00 0.00 0.00 2.24
7296 8981 1.981495 TGTGATGTGTGTGGGGTATCA 59.019 47.619 0.00 0.00 0.00 2.15
7297 8982 2.575735 TGTGATGTGTGTGGGGTATCAT 59.424 45.455 0.00 0.00 31.28 2.45
7363 9375 2.538939 GGCAAACACAGAAACTGACGAC 60.539 50.000 5.76 0.00 35.18 4.34
7364 9376 2.351726 GCAAACACAGAAACTGACGACT 59.648 45.455 5.76 0.00 35.18 4.18
7365 9377 3.554324 GCAAACACAGAAACTGACGACTA 59.446 43.478 5.76 0.00 35.18 2.59
7366 9378 4.318121 GCAAACACAGAAACTGACGACTAG 60.318 45.833 5.76 0.00 35.18 2.57
7367 9379 3.644884 ACACAGAAACTGACGACTAGG 57.355 47.619 5.76 0.00 35.18 3.02
7368 9380 3.220110 ACACAGAAACTGACGACTAGGA 58.780 45.455 5.76 0.00 35.18 2.94
7383 9395 7.660617 TGACGACTAGGAGTATATTCTAACCAG 59.339 40.741 0.00 0.00 0.00 4.00
7401 9413 4.928601 ACCAGCTTTTTAGACCGTTTTTC 58.071 39.130 0.00 0.00 0.00 2.29
7404 9416 5.685954 CCAGCTTTTTAGACCGTTTTTCTTC 59.314 40.000 0.00 0.00 0.00 2.87
7462 9507 5.301551 TCTGTCAATCTTTTAGCCAGCAAAA 59.698 36.000 0.00 0.00 0.00 2.44
7463 9508 5.911752 TGTCAATCTTTTAGCCAGCAAAAA 58.088 33.333 0.00 0.00 0.00 1.94
7464 9509 6.523840 TGTCAATCTTTTAGCCAGCAAAAAT 58.476 32.000 0.00 0.00 0.00 1.82
7466 9511 6.646240 GTCAATCTTTTAGCCAGCAAAAATCA 59.354 34.615 0.00 0.00 0.00 2.57
7467 9512 6.869913 TCAATCTTTTAGCCAGCAAAAATCAG 59.130 34.615 0.00 0.00 0.00 2.90
7468 9513 4.559153 TCTTTTAGCCAGCAAAAATCAGC 58.441 39.130 0.00 0.00 0.00 4.26
7520 9565 1.178276 TTTTTGTGTGACCAACCGCT 58.822 45.000 0.00 0.00 0.00 5.52
7596 9641 8.749499 GTTTTCATCATTCTGTTTCTGTTCTTG 58.251 33.333 0.00 0.00 0.00 3.02
7601 9662 5.994054 TCATTCTGTTTCTGTTCTTGGAGAG 59.006 40.000 0.00 0.00 0.00 3.20
7606 9667 4.039730 TGTTTCTGTTCTTGGAGAGAGAGG 59.960 45.833 0.00 0.00 35.37 3.69
7609 9670 2.760092 CTGTTCTTGGAGAGAGAGGGAG 59.240 54.545 0.00 0.00 35.37 4.30
7610 9671 2.107366 GTTCTTGGAGAGAGAGGGAGG 58.893 57.143 0.00 0.00 35.37 4.30
7620 9681 1.222567 GAGAGGGAGGGAGAGAGAGT 58.777 60.000 0.00 0.00 0.00 3.24
7623 9684 2.512476 AGAGGGAGGGAGAGAGAGTAAC 59.488 54.545 0.00 0.00 0.00 2.50
7624 9685 2.242708 GAGGGAGGGAGAGAGAGTAACA 59.757 54.545 0.00 0.00 0.00 2.41
7625 9686 2.024751 AGGGAGGGAGAGAGAGTAACAC 60.025 54.545 0.00 0.00 0.00 3.32
7626 9687 2.380941 GGAGGGAGAGAGAGTAACACC 58.619 57.143 0.00 0.00 0.00 4.16
7627 9688 2.291670 GGAGGGAGAGAGAGTAACACCA 60.292 54.545 0.00 0.00 0.00 4.17
7628 9689 3.628769 GGAGGGAGAGAGAGTAACACCAT 60.629 52.174 0.00 0.00 0.00 3.55
7630 9691 2.432510 GGGAGAGAGAGTAACACCATGG 59.567 54.545 11.19 11.19 0.00 3.66
7632 9693 2.763448 GAGAGAGAGTAACACCATGGCT 59.237 50.000 13.04 0.00 0.00 4.75
7677 10084 3.594134 AGCAGCATCTCTACTGTTTGAC 58.406 45.455 0.00 0.00 36.26 3.18
7698 10105 3.200593 CTGCATGCTGAGGCCGAC 61.201 66.667 20.33 0.00 37.74 4.79
7753 10160 4.761086 ACATGATGGGATCAGATACCTCT 58.239 43.478 13.36 0.01 43.53 3.69
7770 10177 7.665974 AGATACCTCTTTTTCTTTGGTGTTAGG 59.334 37.037 0.00 0.00 32.74 2.69
7774 10420 4.712337 TCTTTTTCTTTGGTGTTAGGCCAA 59.288 37.500 5.01 0.00 43.51 4.52
7775 10421 4.394439 TTTTCTTTGGTGTTAGGCCAAC 57.606 40.909 5.01 8.36 44.70 3.77
7776 10422 3.306472 TTCTTTGGTGTTAGGCCAACT 57.694 42.857 5.01 0.00 44.70 3.16
7780 10426 2.942641 GGTGTTAGGCCAACTCCAC 58.057 57.895 23.09 14.65 45.98 4.02
7788 10434 4.728102 CCAACTCCACCGCGCGTA 62.728 66.667 29.95 10.11 0.00 4.42
7790 10436 4.729856 AACTCCACCGCGCGTACC 62.730 66.667 29.95 0.00 0.00 3.34
7801 10447 1.373999 CGCGTACCGTTTGGGGTAA 60.374 57.895 0.00 0.00 43.86 2.85
7802 10448 0.948141 CGCGTACCGTTTGGGGTAAA 60.948 55.000 0.00 0.00 43.86 2.01
7804 10450 1.069296 GCGTACCGTTTGGGGTAAAAC 60.069 52.381 0.00 0.00 43.86 2.43
7805 10451 2.216898 CGTACCGTTTGGGGTAAAACA 58.783 47.619 0.00 0.00 43.86 2.83
7806 10452 2.813172 CGTACCGTTTGGGGTAAAACAT 59.187 45.455 0.00 0.00 43.86 2.71
7807 10453 3.365164 CGTACCGTTTGGGGTAAAACATG 60.365 47.826 0.00 0.00 43.86 3.21
7808 10454 2.946785 ACCGTTTGGGGTAAAACATGA 58.053 42.857 0.00 0.00 39.53 3.07
7809 10455 2.624364 ACCGTTTGGGGTAAAACATGAC 59.376 45.455 0.00 0.00 39.53 3.06
7810 10456 2.029739 CCGTTTGGGGTAAAACATGACC 60.030 50.000 0.00 0.00 39.53 4.02
7816 10462 0.808755 GGTAAAACATGACCCAGCGG 59.191 55.000 0.00 0.00 0.00 5.52
7818 10464 2.616001 GGTAAAACATGACCCAGCGGTA 60.616 50.000 0.00 0.00 44.88 4.02
7819 10465 2.279935 AAAACATGACCCAGCGGTAA 57.720 45.000 0.00 0.00 44.88 2.85
7821 10467 3.637911 AAACATGACCCAGCGGTAATA 57.362 42.857 0.00 0.00 44.88 0.98
7822 10468 2.614829 ACATGACCCAGCGGTAATAC 57.385 50.000 0.00 0.00 44.88 1.89
7823 10469 1.140252 ACATGACCCAGCGGTAATACC 59.860 52.381 0.00 0.00 44.88 2.73
7824 10470 0.763035 ATGACCCAGCGGTAATACCC 59.237 55.000 3.51 0.00 44.88 3.69
7825 10471 0.618107 TGACCCAGCGGTAATACCCA 60.618 55.000 3.51 0.00 44.88 4.51
7826 10472 0.542805 GACCCAGCGGTAATACCCAA 59.457 55.000 3.51 0.00 44.88 4.12
7827 10473 0.993470 ACCCAGCGGTAATACCCAAA 59.007 50.000 3.51 0.00 42.18 3.28
7828 10474 1.340308 ACCCAGCGGTAATACCCAAAC 60.340 52.381 3.51 0.00 42.18 2.93
7829 10475 1.011333 CCAGCGGTAATACCCAAACG 58.989 55.000 3.51 0.00 33.75 3.60
7831 10477 0.903942 AGCGGTAATACCCAAACGGA 59.096 50.000 3.51 0.00 33.75 4.69
7833 10479 1.675415 GCGGTAATACCCAAACGGACA 60.675 52.381 3.51 0.00 33.75 4.02
7836 10482 3.528532 GGTAATACCCAAACGGACAGAG 58.471 50.000 0.00 0.00 34.64 3.35
7837 10483 3.055602 GGTAATACCCAAACGGACAGAGT 60.056 47.826 0.00 0.00 34.64 3.24
7838 10484 3.782656 AATACCCAAACGGACAGAGTT 57.217 42.857 0.00 0.00 34.64 3.01
7840 10486 0.544697 ACCCAAACGGACAGAGTTGT 59.455 50.000 0.00 0.00 41.18 3.32
7841 10487 1.064979 ACCCAAACGGACAGAGTTGTT 60.065 47.619 0.00 0.00 37.76 2.83
7842 10488 1.602377 CCCAAACGGACAGAGTTGTTC 59.398 52.381 0.00 0.00 37.76 3.18
7843 10489 2.561569 CCAAACGGACAGAGTTGTTCT 58.438 47.619 0.00 0.00 37.76 3.01
7845 10491 4.315803 CCAAACGGACAGAGTTGTTCTAT 58.684 43.478 0.00 0.00 37.76 1.98
7846 10492 4.152402 CCAAACGGACAGAGTTGTTCTATG 59.848 45.833 0.00 0.00 40.75 2.23
7847 10493 3.594603 ACGGACAGAGTTGTTCTATGG 57.405 47.619 0.00 0.00 39.43 2.74
7848 10494 3.162666 ACGGACAGAGTTGTTCTATGGA 58.837 45.455 0.00 0.00 39.43 3.41
7849 10495 3.056749 ACGGACAGAGTTGTTCTATGGAC 60.057 47.826 0.00 0.00 39.43 4.02
7850 10496 3.512680 GGACAGAGTTGTTCTATGGACG 58.487 50.000 0.00 0.00 39.43 4.79
7851 10497 2.924290 GACAGAGTTGTTCTATGGACGC 59.076 50.000 0.00 0.00 39.43 5.19
7852 10498 2.271800 CAGAGTTGTTCTATGGACGCC 58.728 52.381 0.00 0.00 33.83 5.68
7853 10499 2.093973 CAGAGTTGTTCTATGGACGCCT 60.094 50.000 0.00 0.00 33.83 5.52
7854 10500 2.567615 AGAGTTGTTCTATGGACGCCTT 59.432 45.455 0.00 0.00 33.23 4.35
7855 10501 3.008049 AGAGTTGTTCTATGGACGCCTTT 59.992 43.478 0.00 0.00 33.23 3.11
7856 10502 3.751518 AGTTGTTCTATGGACGCCTTTT 58.248 40.909 0.00 0.00 0.00 2.27
7857 10503 4.142038 AGTTGTTCTATGGACGCCTTTTT 58.858 39.130 0.00 0.00 0.00 1.94
7871 10517 3.539842 TTTTTGTCCGGCCCAACC 58.460 55.556 0.00 0.00 0.00 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 3.749954 GCCACTTTGGATAGATGCCATCT 60.750 47.826 12.62 12.62 40.96 2.90
133 139 0.249398 ACATCTTTTCTAGCCGCCGT 59.751 50.000 0.00 0.00 0.00 5.68
280 291 5.122396 AGTCTAAATTTTGACCACGCTCATC 59.878 40.000 23.39 1.55 34.21 2.92
615 633 6.619018 GCACAAACCACATATGCATTTCAAAG 60.619 38.462 3.54 0.00 36.30 2.77
646 670 2.979036 CAAAAATACAGCGCGCGC 59.021 55.556 45.10 45.10 42.33 6.86
647 671 2.823894 CGCAAAAATACAGCGCGCG 61.824 57.895 28.44 28.44 45.14 6.86
682 708 0.027455 GTTATAATGCAGCACGCGCA 59.973 50.000 5.73 10.12 46.97 6.09
688 716 1.063321 CAACCGCGTTATAATGCAGCA 59.937 47.619 25.33 0.00 40.94 4.41
810 838 3.006940 TGTTGGATGCTTAAGTAAGGCG 58.993 45.455 4.02 0.00 33.95 5.52
811 839 5.343249 CATTGTTGGATGCTTAAGTAAGGC 58.657 41.667 4.02 0.00 33.95 4.35
812 840 5.163519 CCCATTGTTGGATGCTTAAGTAAGG 60.164 44.000 4.02 0.00 46.92 2.69
813 841 5.163519 CCCCATTGTTGGATGCTTAAGTAAG 60.164 44.000 4.02 0.00 46.92 2.34
814 842 4.709397 CCCCATTGTTGGATGCTTAAGTAA 59.291 41.667 4.02 0.00 46.92 2.24
837 866 2.159881 CGTAAACAAAGTGTAGAGGCGC 60.160 50.000 0.00 0.00 0.00 6.53
863 892 0.892755 TCGAAGGCGTATCACCACTT 59.107 50.000 0.00 0.00 38.98 3.16
865 894 1.278238 CTTCGAAGGCGTATCACCAC 58.722 55.000 17.70 0.00 38.98 4.16
889 918 2.737783 CCTACCAACGAATGCACGTAAA 59.262 45.455 2.52 0.00 45.83 2.01
890 919 2.339418 CCTACCAACGAATGCACGTAA 58.661 47.619 2.52 0.00 45.83 3.18
902 931 1.201414 CGTTTTGGATGCCCTACCAAC 59.799 52.381 0.00 0.00 44.34 3.77
949 978 1.989508 GGCAGTGGGAATTTGGGGG 60.990 63.158 0.00 0.00 0.00 5.40
972 1001 2.027745 TGATCTGTTGAGTCCAAGCCTC 60.028 50.000 0.00 0.00 32.06 4.70
973 1002 1.980765 TGATCTGTTGAGTCCAAGCCT 59.019 47.619 0.00 0.00 32.06 4.58
974 1003 2.479566 TGATCTGTTGAGTCCAAGCC 57.520 50.000 0.00 0.00 32.06 4.35
976 1005 3.077359 GGGTTGATCTGTTGAGTCCAAG 58.923 50.000 0.00 0.00 32.06 3.61
979 1008 1.340114 GGGGGTTGATCTGTTGAGTCC 60.340 57.143 0.00 0.00 0.00 3.85
981 1010 1.444933 TGGGGGTTGATCTGTTGAGT 58.555 50.000 0.00 0.00 0.00 3.41
1015 1047 0.868406 GTTTCTGTCTCGTGCTTGGG 59.132 55.000 0.00 0.00 0.00 4.12
1161 1199 2.042843 GAGCGGAGGAGGAGGGAA 60.043 66.667 0.00 0.00 0.00 3.97
1216 1254 6.028131 AGAGAATATATCATGAAGGAGGGCA 58.972 40.000 0.00 0.00 0.00 5.36
1230 1268 6.415573 GGGGGAATAACGCAAGAGAATATAT 58.584 40.000 0.00 0.00 43.62 0.86
1233 1271 3.493699 CGGGGGAATAACGCAAGAGAATA 60.494 47.826 0.00 0.00 43.62 1.75
1258 1296 6.543831 CCTAGGTATCTTTCAAATTGACCAGG 59.456 42.308 0.00 0.35 0.00 4.45
1273 1311 1.010602 TCCCCCTGCCCTAGGTATCT 61.011 60.000 8.29 0.00 45.80 1.98
1285 1323 3.519510 TGATGAAGTTTCTAGTCCCCCTG 59.480 47.826 0.00 0.00 0.00 4.45
1367 1405 6.446318 CACAACTAAACGGTACTGGTACTTA 58.554 40.000 6.65 0.00 36.36 2.24
1407 1466 6.151480 TCCACGACATAACACTCATAACACTA 59.849 38.462 0.00 0.00 0.00 2.74
1408 1467 5.047590 TCCACGACATAACACTCATAACACT 60.048 40.000 0.00 0.00 0.00 3.55
1409 1468 5.165676 TCCACGACATAACACTCATAACAC 58.834 41.667 0.00 0.00 0.00 3.32
1521 1632 9.807649 GCTGAAATCATGGAAAATACTAATTGT 57.192 29.630 0.00 0.00 0.00 2.71
1580 1691 8.070034 TGCTAACATTTGAAATCCTGATTCAT 57.930 30.769 0.00 0.00 0.00 2.57
1981 2097 7.485810 CAGCATCATGAAGATAACCAAATTCA 58.514 34.615 0.00 0.00 34.43 2.57
2038 2163 4.814147 TGTAAGTTCACAGCATGAGAGAG 58.186 43.478 0.00 0.00 36.94 3.20
2064 2189 7.778382 TGCAGAAATGTAGAGTATGTCCTAGTA 59.222 37.037 0.00 0.00 0.00 1.82
2077 2202 9.679661 TTTCCATATAAGTTGCAGAAATGTAGA 57.320 29.630 0.00 0.00 0.00 2.59
2085 2210 9.625747 TCAACATATTTCCATATAAGTTGCAGA 57.374 29.630 0.00 0.00 38.55 4.26
2087 2212 9.183368 TGTCAACATATTTCCATATAAGTTGCA 57.817 29.630 0.00 0.00 38.55 4.08
2124 2249 7.225734 TGCTTGCATCGCTAATATACTGTAAAA 59.774 33.333 9.52 0.00 0.00 1.52
2143 2268 1.003464 TCAGAACTATGGCTGCTTGCA 59.997 47.619 0.00 0.00 45.15 4.08
2174 2299 3.431673 TGCCACTTCCATAACACATGA 57.568 42.857 0.00 0.00 0.00 3.07
2184 2309 4.214310 TCTTTTCTTTGATGCCACTTCCA 58.786 39.130 0.00 0.00 0.00 3.53
2215 2340 2.368439 TCAATTTTGGATGCCTCGGAG 58.632 47.619 0.00 0.00 0.00 4.63
2228 2353 7.439381 ACTGCATCTTCTGAATGTTCAATTTT 58.561 30.769 0.00 0.00 36.64 1.82
2249 2374 2.231235 CACCCTTCCCATTTGTTACTGC 59.769 50.000 0.00 0.00 0.00 4.40
2252 2377 3.119137 GCATCACCCTTCCCATTTGTTAC 60.119 47.826 0.00 0.00 0.00 2.50
2282 2407 6.357367 AGCAGAATTTATACTAACCAGTGGG 58.643 40.000 15.21 0.00 36.14 4.61
2284 2409 8.492673 TCAAGCAGAATTTATACTAACCAGTG 57.507 34.615 0.00 0.00 36.14 3.66
2302 2427 4.255833 TGGCCAAAAAGTTATCAAGCAG 57.744 40.909 0.61 0.00 0.00 4.24
2343 2468 5.721000 ACCACCCACAATGATAATTGACATT 59.279 36.000 9.95 6.24 37.22 2.71
2344 2469 5.271598 ACCACCCACAATGATAATTGACAT 58.728 37.500 9.95 0.00 35.60 3.06
2345 2470 4.671831 ACCACCCACAATGATAATTGACA 58.328 39.130 9.95 0.00 35.60 3.58
2346 2471 5.184864 TGAACCACCCACAATGATAATTGAC 59.815 40.000 9.95 0.00 35.60 3.18
2347 2472 5.184864 GTGAACCACCCACAATGATAATTGA 59.815 40.000 9.95 0.00 35.60 2.57
2348 2473 5.185635 AGTGAACCACCCACAATGATAATTG 59.814 40.000 0.77 0.77 37.01 2.32
2427 2559 6.565999 CGGAGTGAAGTGAATTTGTTTCTACC 60.566 42.308 0.00 0.00 35.23 3.18
2574 2706 4.456535 TCCCAGATTTCAGTGAACGAAAA 58.543 39.130 4.68 0.00 36.06 2.29
2672 2804 6.479990 TCATTGATCCACTAGCTAAAATGACG 59.520 38.462 0.00 0.00 30.16 4.35
2750 2883 4.461992 CAAAGCTTTCACATTTGCCAAG 57.538 40.909 9.23 0.00 0.00 3.61
2755 2889 6.259638 ACAAAATGCAAAGCTTTCACATTTG 58.740 32.000 31.23 28.11 39.99 2.32
2787 2921 7.105588 TCATAAGCTAGCATTTCTTCAGTTCA 58.894 34.615 18.83 0.00 0.00 3.18
2993 3418 9.003658 AGGTTGTCAATACTGTCAAGAAAATAG 57.996 33.333 0.00 0.00 32.36 1.73
3050 3475 3.521126 AGCCACTACACAGGATTGAGATT 59.479 43.478 0.00 0.00 0.00 2.40
3071 3496 5.371526 AGCAAACAGGGATATGATACACAG 58.628 41.667 0.00 0.00 0.00 3.66
3087 3512 2.057137 ACAGAAGAGGCAAGCAAACA 57.943 45.000 0.00 0.00 0.00 2.83
3089 3514 6.205464 GCATATATACAGAAGAGGCAAGCAAA 59.795 38.462 0.00 0.00 0.00 3.68
3117 3542 7.094075 CCTGACCCTAGTACGCAATGTATTATA 60.094 40.741 0.00 0.00 35.02 0.98
3129 3554 1.477195 CCTCTCCCTGACCCTAGTACG 60.477 61.905 0.00 0.00 0.00 3.67
3189 3614 6.200878 TCTATATAAAGAGGGCCCCTTTTG 57.799 41.667 31.09 20.00 35.65 2.44
3230 3655 9.388506 AGAAATAAGATCTGTGATTGTTACCAG 57.611 33.333 0.00 0.00 0.00 4.00
3269 3694 2.317530 AGGTATCTTTCAGCTTCGGC 57.682 50.000 0.00 0.00 42.17 5.54
3272 3697 8.401709 CAAATTAGGAAGGTATCTTTCAGCTTC 58.598 37.037 0.00 5.87 45.45 3.86
3311 3819 5.983540 AGAATAACATCCCAACTCTCTCAC 58.016 41.667 0.00 0.00 0.00 3.51
3320 3833 7.691791 GCTCCCAGTTATAGAATAACATCCCAA 60.692 40.741 11.30 0.00 0.00 4.12
3327 3840 4.998033 GCCAGCTCCCAGTTATAGAATAAC 59.002 45.833 2.27 2.27 0.00 1.89
3372 3885 2.388735 CTCTGGCCCACACTACAGATA 58.611 52.381 0.00 0.00 39.06 1.98
3386 3899 1.755179 TGCCTTTCTAATGCTCTGGC 58.245 50.000 0.00 0.00 39.33 4.85
3406 3920 3.054139 AGCAAAGAGGAGATGGTGCATTA 60.054 43.478 0.00 0.00 34.44 1.90
3419 3933 6.971602 TCTACGATTACATCTAGCAAAGAGG 58.028 40.000 0.00 0.00 41.86 3.69
3507 4021 7.786030 ACATTAGCTTCACTGTATGACATACT 58.214 34.615 22.85 4.60 36.92 2.12
3598 4123 8.091449 CAGGACAAGATTACTGGGAGATATTAC 58.909 40.741 0.00 0.00 0.00 1.89
3635 4160 9.129209 GAGTAATGATTTAGAAAAAGGTGCAAC 57.871 33.333 0.00 0.00 0.00 4.17
3715 4240 2.415512 GGCATGTAGTTCGGTTTCTGAC 59.584 50.000 0.00 0.00 0.00 3.51
3724 4249 1.726791 GACACAGTGGCATGTAGTTCG 59.273 52.381 0.00 0.00 0.00 3.95
3769 4294 7.804843 AGGCTCATCTTGATCTTTCTTATTG 57.195 36.000 0.00 0.00 0.00 1.90
3776 4301 6.126536 ACCTTGATAGGCTCATCTTGATCTTT 60.127 38.462 0.00 0.00 46.22 2.52
3808 4333 8.391075 ACAACAACAGTATAAGTAGTGCAATT 57.609 30.769 0.00 0.00 35.12 2.32
3826 4351 4.612033 GCCATTACGTACTCCAACAACAAC 60.612 45.833 0.00 0.00 0.00 3.32
3827 4352 3.499157 GCCATTACGTACTCCAACAACAA 59.501 43.478 0.00 0.00 0.00 2.83
3828 4353 3.068560 GCCATTACGTACTCCAACAACA 58.931 45.455 0.00 0.00 0.00 3.33
3829 4354 2.417586 GGCCATTACGTACTCCAACAAC 59.582 50.000 0.00 0.00 0.00 3.32
3830 4355 2.303600 AGGCCATTACGTACTCCAACAA 59.696 45.455 5.01 0.00 0.00 2.83
3831 4356 1.903860 AGGCCATTACGTACTCCAACA 59.096 47.619 5.01 0.00 0.00 3.33
3832 4357 2.685850 AGGCCATTACGTACTCCAAC 57.314 50.000 5.01 0.00 0.00 3.77
3833 4358 4.443739 CCATTAGGCCATTACGTACTCCAA 60.444 45.833 5.01 0.00 0.00 3.53
3834 4359 3.070446 CCATTAGGCCATTACGTACTCCA 59.930 47.826 5.01 0.00 0.00 3.86
3835 4360 3.556423 CCCATTAGGCCATTACGTACTCC 60.556 52.174 5.01 0.00 0.00 3.85
3836 4361 3.660865 CCCATTAGGCCATTACGTACTC 58.339 50.000 5.01 0.00 0.00 2.59
3837 4362 3.764237 CCCATTAGGCCATTACGTACT 57.236 47.619 5.01 0.00 0.00 2.73
3849 4374 2.196776 CAGCCCAGGCCCATTAGG 59.803 66.667 4.70 0.00 43.17 2.69
3850 4375 2.196776 CCAGCCCAGGCCCATTAG 59.803 66.667 4.70 0.00 43.17 1.73
3858 4383 2.743718 CTATACCGCCAGCCCAGG 59.256 66.667 0.00 0.00 0.00 4.45
3859 4384 2.031163 GCTATACCGCCAGCCCAG 59.969 66.667 0.00 0.00 0.00 4.45
3869 4394 3.509184 CCCTAAGACTAACGGGCTATACC 59.491 52.174 0.00 0.00 29.69 2.73
3870 4395 4.780275 CCCTAAGACTAACGGGCTATAC 57.220 50.000 0.00 0.00 29.69 1.47
3876 4401 1.682323 GAGAGCCCTAAGACTAACGGG 59.318 57.143 0.00 0.00 39.76 5.28
3877 4402 2.619646 GAGAGAGCCCTAAGACTAACGG 59.380 54.545 0.00 0.00 0.00 4.44
3878 4403 3.547746 AGAGAGAGCCCTAAGACTAACG 58.452 50.000 0.00 0.00 0.00 3.18
3879 4404 4.788679 AGAGAGAGAGCCCTAAGACTAAC 58.211 47.826 0.00 0.00 0.00 2.34
3880 4405 4.724798 AGAGAGAGAGAGCCCTAAGACTAA 59.275 45.833 0.00 0.00 0.00 2.24
3881 4406 4.303794 AGAGAGAGAGAGCCCTAAGACTA 58.696 47.826 0.00 0.00 0.00 2.59
3882 4407 3.123273 AGAGAGAGAGAGCCCTAAGACT 58.877 50.000 0.00 0.00 0.00 3.24
3883 4408 3.136626 AGAGAGAGAGAGAGCCCTAAGAC 59.863 52.174 0.00 0.00 0.00 3.01
3884 4409 3.391296 GAGAGAGAGAGAGAGCCCTAAGA 59.609 52.174 0.00 0.00 0.00 2.10
3885 4410 3.392616 AGAGAGAGAGAGAGAGCCCTAAG 59.607 52.174 0.00 0.00 0.00 2.18
3886 4411 3.391296 GAGAGAGAGAGAGAGAGCCCTAA 59.609 52.174 0.00 0.00 0.00 2.69
3887 4412 2.972713 GAGAGAGAGAGAGAGAGCCCTA 59.027 54.545 0.00 0.00 0.00 3.53
3888 4413 1.771255 GAGAGAGAGAGAGAGAGCCCT 59.229 57.143 0.00 0.00 0.00 5.19
3889 4414 1.771255 AGAGAGAGAGAGAGAGAGCCC 59.229 57.143 0.00 0.00 0.00 5.19
3890 4415 2.703007 AGAGAGAGAGAGAGAGAGAGCC 59.297 54.545 0.00 0.00 0.00 4.70
3891 4416 3.640967 AGAGAGAGAGAGAGAGAGAGAGC 59.359 52.174 0.00 0.00 0.00 4.09
3892 4417 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3893 4418 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3894 4419 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3895 4420 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
3896 4421 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
3897 4422 4.219115 GGAGAGAGAGAGAGAGAGAGAGA 58.781 52.174 0.00 0.00 0.00 3.10
3898 4423 3.323403 GGGAGAGAGAGAGAGAGAGAGAG 59.677 56.522 0.00 0.00 0.00 3.20
3899 4424 3.051803 AGGGAGAGAGAGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
3900 4425 3.312890 AGGGAGAGAGAGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
3901 4426 3.309296 GAGGGAGAGAGAGAGAGAGAGA 58.691 54.545 0.00 0.00 0.00 3.10
3902 4427 2.370189 GGAGGGAGAGAGAGAGAGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
3903 4428 2.408565 GGAGGGAGAGAGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
3904 4429 1.421646 GGGAGGGAGAGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
3905 4430 1.010793 AGGGAGGGAGAGAGAGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
3906 4431 1.421646 GAGGGAGGGAGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
3907 4432 1.518367 GAGGGAGGGAGAGAGAGAGA 58.482 60.000 0.00 0.00 0.00 3.10
3908 4433 0.478507 GGAGGGAGGGAGAGAGAGAG 59.521 65.000 0.00 0.00 0.00 3.20
3909 4434 0.996762 GGGAGGGAGGGAGAGAGAGA 60.997 65.000 0.00 0.00 0.00 3.10
3910 4435 0.998945 AGGGAGGGAGGGAGAGAGAG 60.999 65.000 0.00 0.00 0.00 3.20
3911 4436 0.996762 GAGGGAGGGAGGGAGAGAGA 60.997 65.000 0.00 0.00 0.00 3.10
3912 4437 1.541672 GAGGGAGGGAGGGAGAGAG 59.458 68.421 0.00 0.00 0.00 3.20
3913 4438 2.015726 GGAGGGAGGGAGGGAGAGA 61.016 68.421 0.00 0.00 0.00 3.10
3914 4439 2.612251 GGAGGGAGGGAGGGAGAG 59.388 72.222 0.00 0.00 0.00 3.20
3915 4440 3.036959 GGGAGGGAGGGAGGGAGA 61.037 72.222 0.00 0.00 0.00 3.71
3916 4441 3.039526 AGGGAGGGAGGGAGGGAG 61.040 72.222 0.00 0.00 0.00 4.30
3917 4442 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
3918 4443 4.179599 GGAGGGAGGGAGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
3919 4444 4.179599 GGGAGGGAGGGAGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
3920 4445 3.039526 AGGGAGGGAGGGAGGGAG 61.040 72.222 0.00 0.00 0.00 4.30
3921 4446 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
3922 4447 4.179599 GGAGGGAGGGAGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
3923 4448 4.179599 GGGAGGGAGGGAGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
3924 4449 3.039526 AGGGAGGGAGGGAGGGAG 61.040 72.222 0.00 0.00 0.00 4.30
3925 4450 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
3926 4451 4.179599 GGAGGGAGGGAGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
3927 4452 4.179599 GGGAGGGAGGGAGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
3928 4453 3.039526 AGGGAGGGAGGGAGGGAG 61.040 72.222 0.00 0.00 0.00 4.30
4343 4868 2.214216 TGGAGGAAGGTGTGGTCGG 61.214 63.158 0.00 0.00 0.00 4.79
4344 4869 1.004918 GTGGAGGAAGGTGTGGTCG 60.005 63.158 0.00 0.00 0.00 4.79
4351 4876 1.152312 AGGTGACGTGGAGGAAGGT 60.152 57.895 0.00 0.00 0.00 3.50
4354 4879 1.202964 TGTAGAGGTGACGTGGAGGAA 60.203 52.381 0.00 0.00 0.00 3.36
4358 4883 1.248785 GGCTGTAGAGGTGACGTGGA 61.249 60.000 0.00 0.00 0.00 4.02
4359 4884 1.215647 GGCTGTAGAGGTGACGTGG 59.784 63.158 0.00 0.00 0.00 4.94
4361 4886 0.251209 TCAGGCTGTAGAGGTGACGT 60.251 55.000 15.27 0.00 0.00 4.34
4362 4887 0.453793 CTCAGGCTGTAGAGGTGACG 59.546 60.000 15.27 0.00 0.00 4.35
4363 4888 1.474879 GTCTCAGGCTGTAGAGGTGAC 59.525 57.143 15.27 8.67 32.76 3.67
4364 4889 1.075536 TGTCTCAGGCTGTAGAGGTGA 59.924 52.381 15.27 0.51 32.76 4.02
4369 4894 0.243907 GCGTTGTCTCAGGCTGTAGA 59.756 55.000 15.27 12.81 0.00 2.59
4375 4900 2.743928 CAGGGCGTTGTCTCAGGC 60.744 66.667 0.00 0.00 0.00 4.85
4458 4983 2.939261 GCGGGTGGGAAGAACTCGA 61.939 63.158 0.00 0.00 44.37 4.04
4644 5169 0.322322 ACCGCCTGTCGTAATTCCAA 59.678 50.000 0.00 0.00 36.19 3.53
4733 5258 3.206246 CGTTGTTGGTGTGGCGGT 61.206 61.111 0.00 0.00 0.00 5.68
4790 5321 1.663379 CTGGTACGAGATGACCGGCA 61.663 60.000 0.00 0.00 38.69 5.69
4870 5403 2.445845 CTGGATGGGGACGCCCTA 60.446 66.667 13.58 8.88 44.66 3.53
4933 6142 1.592400 CCACCTGGACATGCAGCTTG 61.592 60.000 0.00 6.74 37.39 4.01
5141 6350 1.934463 CTCTCTCTCTCTCTCGCGC 59.066 63.158 0.00 0.00 0.00 6.86
5146 6355 0.106519 GCCCTGCTCTCTCTCTCTCT 60.107 60.000 0.00 0.00 0.00 3.10
5147 6356 1.447317 CGCCCTGCTCTCTCTCTCTC 61.447 65.000 0.00 0.00 0.00 3.20
5148 6357 1.453745 CGCCCTGCTCTCTCTCTCT 60.454 63.158 0.00 0.00 0.00 3.10
5230 6443 8.593945 AGGAGAGGAGATGTATCAATCTAATC 57.406 38.462 0.00 0.00 37.03 1.75
5262 6475 5.411781 CAGTACAACTGGTATGAACCTCTC 58.588 45.833 0.00 0.00 46.91 3.20
5280 6493 8.289618 TGAAGTTGCAATTTAATCTCACAGTAC 58.710 33.333 7.22 0.00 0.00 2.73
5534 6747 4.832266 CCTAAGATCACAGAGCTCTACCAT 59.168 45.833 17.75 8.05 0.00 3.55
5599 6812 3.905678 CCTCTCTTCGCCGCCGAT 61.906 66.667 0.00 0.00 43.97 4.18
5601 6814 3.905678 ATCCTCTCTTCGCCGCCG 61.906 66.667 0.00 0.00 0.00 6.46
5602 6815 2.279784 CATCCTCTCTTCGCCGCC 60.280 66.667 0.00 0.00 0.00 6.13
5603 6816 0.102481 TAACATCCTCTCTTCGCCGC 59.898 55.000 0.00 0.00 0.00 6.53
5657 7173 5.897377 ATACAACAGGAATGGCAAGTTAC 57.103 39.130 0.00 0.00 0.00 2.50
5767 7342 5.103813 TCCAGTACATACCCTAGTTAGCAGA 60.104 44.000 0.00 0.00 0.00 4.26
5823 7398 2.911484 AGCAATGCCTTAGCTCACTAC 58.089 47.619 0.00 0.00 40.80 2.73
6009 7584 7.773224 TGAAATACGGATAATCTTGTGGTCAAT 59.227 33.333 0.00 0.00 32.82 2.57
6297 7874 8.950208 ACTTTAGATAGCTGACCAGTAAATTC 57.050 34.615 0.00 0.00 0.00 2.17
6370 8012 2.805671 CCACTAGTCAACATTCAACGCA 59.194 45.455 0.00 0.00 0.00 5.24
6702 8347 5.817816 CCACCTGGACATTAGAAATACAGTC 59.182 44.000 0.00 0.00 37.39 3.51
6704 8349 4.576463 GCCACCTGGACATTAGAAATACAG 59.424 45.833 0.00 0.00 37.39 2.74
6708 8353 3.010584 ACTGCCACCTGGACATTAGAAAT 59.989 43.478 0.00 0.00 37.39 2.17
6779 8424 3.934391 GAGAACAGACACCCCGGCG 62.934 68.421 0.00 0.00 0.00 6.46
6821 8466 0.179029 CCTTGACACAAAGACGGGGT 60.179 55.000 0.00 0.00 0.00 4.95
6824 8469 1.308998 AAGCCTTGACACAAAGACGG 58.691 50.000 0.00 0.00 0.00 4.79
6869 8514 0.523968 CCGAATTGGCGCATCACTTG 60.524 55.000 10.83 0.00 0.00 3.16
6953 8606 2.827190 CTGCGGCATGGCTGACAT 60.827 61.111 18.09 0.00 41.57 3.06
6999 8652 1.744368 AGGCAAGACAGCTGCGATG 60.744 57.895 15.27 11.14 34.17 3.84
7075 8728 5.109903 AGCACGCTAGAAAAACGATAAGAT 58.890 37.500 0.00 0.00 0.00 2.40
7099 8752 1.961793 TGGTTAAGCTTTGACGCTGT 58.038 45.000 3.20 0.00 40.79 4.40
7117 8770 7.709947 ACAATACAATCATATCCAGCAAGTTG 58.290 34.615 0.00 0.00 0.00 3.16
7118 8771 7.886629 ACAATACAATCATATCCAGCAAGTT 57.113 32.000 0.00 0.00 0.00 2.66
7197 8853 5.133660 TCCCCAATAGGCAAGTATACATTGT 59.866 40.000 5.50 0.00 0.00 2.71
7201 8857 4.562767 TCTCCCCAATAGGCAAGTATACA 58.437 43.478 5.50 0.00 0.00 2.29
7208 8864 2.274542 TCACTTCTCCCCAATAGGCAA 58.725 47.619 0.00 0.00 0.00 4.52
7233 8915 3.807622 CGTCAAGATACACCGGCATTATT 59.192 43.478 0.00 0.00 0.00 1.40
7236 8918 1.206132 TCGTCAAGATACACCGGCATT 59.794 47.619 0.00 0.00 0.00 3.56
7241 8923 0.527817 GGCCTCGTCAAGATACACCG 60.528 60.000 0.00 0.00 0.00 4.94
7242 8924 0.179081 GGGCCTCGTCAAGATACACC 60.179 60.000 0.84 0.00 0.00 4.16
7268 8953 3.340928 CCACACACATCACACATCTCAT 58.659 45.455 0.00 0.00 0.00 2.90
7273 8958 0.478072 ACCCCACACACATCACACAT 59.522 50.000 0.00 0.00 0.00 3.21
7280 8965 2.484770 GCGTATGATACCCCACACACAT 60.485 50.000 0.00 0.00 0.00 3.21
7281 8966 1.134640 GCGTATGATACCCCACACACA 60.135 52.381 0.00 0.00 0.00 3.72
7283 8968 1.411246 GAGCGTATGATACCCCACACA 59.589 52.381 0.00 0.00 0.00 3.72
7284 8969 1.687123 AGAGCGTATGATACCCCACAC 59.313 52.381 0.00 0.00 0.00 3.82
7285 8970 1.686587 CAGAGCGTATGATACCCCACA 59.313 52.381 0.00 0.00 0.00 4.17
7286 8971 1.961394 TCAGAGCGTATGATACCCCAC 59.039 52.381 0.00 0.00 0.00 4.61
7287 8972 2.375014 TCAGAGCGTATGATACCCCA 57.625 50.000 0.00 0.00 0.00 4.96
7288 8973 3.963428 AATCAGAGCGTATGATACCCC 57.037 47.619 0.00 0.00 36.38 4.95
7289 8974 5.177696 GTCAAAATCAGAGCGTATGATACCC 59.822 44.000 0.00 0.00 36.38 3.69
7291 8976 6.828502 TGTCAAAATCAGAGCGTATGATAC 57.171 37.500 2.42 0.00 36.38 2.24
7292 8977 7.841915 TTTGTCAAAATCAGAGCGTATGATA 57.158 32.000 0.00 0.00 36.38 2.15
7293 8978 6.741992 TTTGTCAAAATCAGAGCGTATGAT 57.258 33.333 0.00 0.00 39.06 2.45
7294 8979 6.426633 TCTTTTGTCAAAATCAGAGCGTATGA 59.573 34.615 11.09 0.00 0.00 2.15
7295 8980 6.602179 TCTTTTGTCAAAATCAGAGCGTATG 58.398 36.000 11.09 0.00 0.00 2.39
7296 8981 6.801539 TCTTTTGTCAAAATCAGAGCGTAT 57.198 33.333 11.09 0.00 0.00 3.06
7297 8982 6.426633 TCATCTTTTGTCAAAATCAGAGCGTA 59.573 34.615 11.09 0.00 0.00 4.42
7368 9380 9.833917 GGTCTAAAAAGCTGGTTAGAATATACT 57.166 33.333 16.89 0.00 37.92 2.12
7383 9395 4.673761 CCGAAGAAAAACGGTCTAAAAAGC 59.326 41.667 0.00 0.00 43.53 3.51
7462 9507 0.392706 TCACACCTGTCACGCTGATT 59.607 50.000 0.00 0.00 0.00 2.57
7463 9508 0.392706 TTCACACCTGTCACGCTGAT 59.607 50.000 0.00 0.00 0.00 2.90
7464 9509 0.249447 CTTCACACCTGTCACGCTGA 60.249 55.000 0.00 0.00 0.00 4.26
7466 9511 0.530650 CACTTCACACCTGTCACGCT 60.531 55.000 0.00 0.00 0.00 5.07
7467 9512 0.529773 TCACTTCACACCTGTCACGC 60.530 55.000 0.00 0.00 0.00 5.34
7468 9513 1.860950 CTTCACTTCACACCTGTCACG 59.139 52.381 0.00 0.00 0.00 4.35
7509 9554 1.529152 TTCGAGCTAGCGGTTGGTCA 61.529 55.000 23.59 11.19 0.00 4.02
7510 9555 0.389426 TTTCGAGCTAGCGGTTGGTC 60.389 55.000 16.40 16.40 0.00 4.02
7511 9556 0.669625 GTTTCGAGCTAGCGGTTGGT 60.670 55.000 9.55 0.00 0.00 3.67
7512 9557 0.669318 TGTTTCGAGCTAGCGGTTGG 60.669 55.000 9.55 0.00 0.00 3.77
7513 9558 0.716108 CTGTTTCGAGCTAGCGGTTG 59.284 55.000 9.55 0.48 0.00 3.77
7514 9559 0.601558 TCTGTTTCGAGCTAGCGGTT 59.398 50.000 9.55 0.00 0.00 4.44
7515 9560 0.109226 GTCTGTTTCGAGCTAGCGGT 60.109 55.000 9.55 0.00 0.00 5.68
7516 9561 0.109272 TGTCTGTTTCGAGCTAGCGG 60.109 55.000 9.55 5.74 0.00 5.52
7520 9565 2.390938 CGTGTTGTCTGTTTCGAGCTA 58.609 47.619 0.00 0.00 0.00 3.32
7550 9595 0.959553 ATCAGTCACCTCGTGTTCGT 59.040 50.000 0.00 0.00 38.33 3.85
7551 9596 1.335964 ACATCAGTCACCTCGTGTTCG 60.336 52.381 0.00 0.00 34.79 3.95
7552 9597 2.440539 ACATCAGTCACCTCGTGTTC 57.559 50.000 0.00 0.00 34.79 3.18
7553 9598 2.910688 AACATCAGTCACCTCGTGTT 57.089 45.000 0.00 0.00 34.79 3.32
7554 9599 2.910688 AAACATCAGTCACCTCGTGT 57.089 45.000 0.00 0.00 34.79 4.49
7555 9600 3.130633 TGAAAACATCAGTCACCTCGTG 58.869 45.455 0.00 0.00 33.04 4.35
7596 9641 0.478507 CTCTCCCTCCCTCTCTCTCC 59.521 65.000 0.00 0.00 0.00 3.71
7601 9662 1.222567 ACTCTCTCTCCCTCCCTCTC 58.777 60.000 0.00 0.00 0.00 3.20
7606 9667 2.291670 TGGTGTTACTCTCTCTCCCTCC 60.292 54.545 0.00 0.00 0.00 4.30
7609 9670 2.432510 CCATGGTGTTACTCTCTCTCCC 59.567 54.545 2.57 0.00 0.00 4.30
7610 9671 2.159028 GCCATGGTGTTACTCTCTCTCC 60.159 54.545 14.67 0.00 0.00 3.71
7626 9687 1.670811 GTCGGTATTCACCAAGCCATG 59.329 52.381 0.00 0.00 46.14 3.66
7627 9688 1.408266 GGTCGGTATTCACCAAGCCAT 60.408 52.381 0.00 0.00 46.14 4.40
7628 9689 0.035820 GGTCGGTATTCACCAAGCCA 60.036 55.000 0.00 0.00 46.14 4.75
7630 9691 1.066430 TCAGGTCGGTATTCACCAAGC 60.066 52.381 0.00 0.00 46.14 4.01
7632 9693 3.992943 ATTCAGGTCGGTATTCACCAA 57.007 42.857 0.00 0.00 46.14 3.67
7696 10103 0.670546 ACAGTACATGTGCAGGCGTC 60.671 55.000 16.62 0.00 41.91 5.19
7698 10105 4.284123 ACAGTACATGTGCAGGCG 57.716 55.556 16.62 4.18 41.91 5.52
7739 10146 6.887002 ACCAAAGAAAAAGAGGTATCTGATCC 59.113 38.462 0.00 0.00 35.37 3.36
7786 10432 3.819902 TCATGTTTTACCCCAAACGGTAC 59.180 43.478 0.00 0.00 38.13 3.34
7788 10434 2.624364 GTCATGTTTTACCCCAAACGGT 59.376 45.455 0.00 0.00 39.19 4.83
7790 10436 3.291809 GGTCATGTTTTACCCCAAACG 57.708 47.619 0.00 0.00 39.19 3.60
7799 10445 3.420300 TTACCGCTGGGTCATGTTTTA 57.580 42.857 0.00 0.00 46.01 1.52
7801 10447 2.507407 ATTACCGCTGGGTCATGTTT 57.493 45.000 0.00 0.00 46.01 2.83
7802 10448 2.420967 GGTATTACCGCTGGGTCATGTT 60.421 50.000 0.00 0.00 46.01 2.71
7804 10450 1.542547 GGGTATTACCGCTGGGTCATG 60.543 57.143 6.77 0.00 46.01 3.07
7805 10451 0.763035 GGGTATTACCGCTGGGTCAT 59.237 55.000 6.77 0.00 46.01 3.06
7806 10452 0.618107 TGGGTATTACCGCTGGGTCA 60.618 55.000 6.77 0.00 46.01 4.02
7807 10453 0.542805 TTGGGTATTACCGCTGGGTC 59.457 55.000 6.77 0.00 46.01 4.46
7809 10455 1.385528 GTTTGGGTATTACCGCTGGG 58.614 55.000 6.77 0.00 39.83 4.45
7810 10456 1.011333 CGTTTGGGTATTACCGCTGG 58.989 55.000 6.77 0.00 39.83 4.85
7811 10457 1.011333 CCGTTTGGGTATTACCGCTG 58.989 55.000 6.77 0.00 39.83 5.18
7812 10458 0.903942 TCCGTTTGGGTATTACCGCT 59.096 50.000 6.77 0.00 39.83 5.52
7813 10459 1.009078 GTCCGTTTGGGTATTACCGC 58.991 55.000 6.77 1.22 39.83 5.68
7814 10460 2.094078 TCTGTCCGTTTGGGTATTACCG 60.094 50.000 6.77 0.00 39.83 4.02
7816 10462 4.198028 ACTCTGTCCGTTTGGGTATTAC 57.802 45.455 0.00 0.00 37.00 1.89
7817 10463 4.040706 ACAACTCTGTCCGTTTGGGTATTA 59.959 41.667 0.00 0.00 37.00 0.98
7818 10464 3.181448 ACAACTCTGTCCGTTTGGGTATT 60.181 43.478 0.00 0.00 37.00 1.89
7819 10465 2.370849 ACAACTCTGTCCGTTTGGGTAT 59.629 45.455 0.00 0.00 37.00 2.73
7821 10467 0.544697 ACAACTCTGTCCGTTTGGGT 59.455 50.000 0.00 0.00 37.00 4.51
7822 10468 1.602377 GAACAACTCTGTCCGTTTGGG 59.398 52.381 0.00 0.00 33.45 4.12
7823 10469 2.561569 AGAACAACTCTGTCCGTTTGG 58.438 47.619 0.00 0.00 33.45 3.28
7824 10470 4.152402 CCATAGAACAACTCTGTCCGTTTG 59.848 45.833 0.00 0.00 33.45 2.93
7825 10471 4.039973 TCCATAGAACAACTCTGTCCGTTT 59.960 41.667 0.00 0.00 33.45 3.60
7826 10472 3.576982 TCCATAGAACAACTCTGTCCGTT 59.423 43.478 0.00 0.00 33.45 4.44
7827 10473 3.056749 GTCCATAGAACAACTCTGTCCGT 60.057 47.826 0.00 0.00 33.45 4.69
7828 10474 3.512680 GTCCATAGAACAACTCTGTCCG 58.487 50.000 0.00 0.00 33.45 4.79
7829 10475 3.512680 CGTCCATAGAACAACTCTGTCC 58.487 50.000 0.00 0.00 33.45 4.02
7831 10477 2.353803 GGCGTCCATAGAACAACTCTGT 60.354 50.000 0.00 0.00 37.39 3.41
7833 10479 2.180276 AGGCGTCCATAGAACAACTCT 58.820 47.619 0.00 0.00 38.28 3.24
7836 10482 4.499037 AAAAAGGCGTCCATAGAACAAC 57.501 40.909 0.00 0.00 0.00 3.32
7854 10500 2.134933 GGGTTGGGCCGGACAAAAA 61.135 57.895 11.00 0.00 38.44 1.94
7855 10501 2.522193 GGGTTGGGCCGGACAAAA 60.522 61.111 11.00 0.00 38.44 2.44
7856 10502 4.607025 GGGGTTGGGCCGGACAAA 62.607 66.667 11.00 0.00 38.44 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.