Multiple sequence alignment - TraesCS6B01G269100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G269100 chr6B 100.000 9878 0 0 1 9878 484534750 484524873 0.000000e+00 18242.0
1 TraesCS6B01G269100 chr6B 99.259 135 1 0 9483 9617 60632805 60632671 2.760000e-60 244.0
2 TraesCS6B01G269100 chr6B 89.820 167 14 3 478 642 147682315 147682480 2.800000e-50 211.0
3 TraesCS6B01G269100 chr6D 93.735 5587 231 40 640 6146 336202703 336208250 0.000000e+00 8268.0
4 TraesCS6B01G269100 chr6D 92.701 2288 83 30 7239 9484 336209559 336211804 0.000000e+00 3223.0
5 TraesCS6B01G269100 chr6D 95.541 1099 47 2 6140 7237 336208408 336209505 0.000000e+00 1757.0
6 TraesCS6B01G269100 chr6D 95.021 482 22 2 1 482 336202225 336202704 0.000000e+00 756.0
7 TraesCS6B01G269100 chr6D 95.906 171 6 1 9709 9878 336212004 336212174 9.770000e-70 276.0
8 TraesCS6B01G269100 chr6D 89.524 105 5 3 3754 3852 365847016 365846912 2.900000e-25 128.0
9 TraesCS6B01G269100 chr6D 94.737 38 1 1 678 714 305193564 305193527 3.850000e-04 58.4
10 TraesCS6B01G269100 chr6A 94.355 3029 101 16 812 3781 475431236 475434253 0.000000e+00 4582.0
11 TraesCS6B01G269100 chr6A 96.751 1847 50 8 5393 7237 475436251 475438089 0.000000e+00 3070.0
12 TraesCS6B01G269100 chr6A 93.030 1406 37 16 8124 9484 475438937 475440326 0.000000e+00 1997.0
13 TraesCS6B01G269100 chr6A 97.631 971 17 5 4429 5395 475435169 475436137 0.000000e+00 1661.0
14 TraesCS6B01G269100 chr6A 95.202 792 30 5 3624 4409 475434269 475435058 0.000000e+00 1245.0
15 TraesCS6B01G269100 chr6A 92.377 669 26 5 7239 7906 475438143 475438787 0.000000e+00 929.0
16 TraesCS6B01G269100 chr6A 90.237 676 55 7 6299 6974 10042868 10042204 0.000000e+00 872.0
17 TraesCS6B01G269100 chr6A 89.425 435 41 5 49 482 475430335 475430765 2.430000e-150 544.0
18 TraesCS6B01G269100 chr6A 99.254 134 1 0 9483 9616 106697651 106697784 9.910000e-60 243.0
19 TraesCS6B01G269100 chr6A 89.820 167 15 1 480 644 33015648 33015814 7.770000e-51 213.0
20 TraesCS6B01G269100 chr6A 83.938 193 20 6 9616 9801 475440329 475440517 3.670000e-39 174.0
21 TraesCS6B01G269100 chr6A 88.679 106 5 4 3753 3852 506642961 506642857 1.350000e-23 122.0
22 TraesCS6B01G269100 chr6A 98.214 56 1 0 1 56 475430099 475430154 2.270000e-16 99.0
23 TraesCS6B01G269100 chr5D 87.380 626 59 8 5960 6581 398367920 398367311 0.000000e+00 701.0
24 TraesCS6B01G269100 chr5D 90.184 163 14 1 481 641 431780588 431780426 2.800000e-50 211.0
25 TraesCS6B01G269100 chr5D 91.262 103 3 3 3756 3852 200643642 200643744 1.730000e-27 135.0
26 TraesCS6B01G269100 chr5D 89.362 47 3 2 662 707 232418836 232418881 3.850000e-04 58.4
27 TraesCS6B01G269100 chr3A 85.481 551 53 11 5534 6082 177681886 177682411 5.220000e-152 549.0
28 TraesCS6B01G269100 chr1A 86.986 292 24 5 5534 5823 6470757 6470478 5.760000e-82 316.0
29 TraesCS6B01G269100 chr1A 99.254 134 1 0 9483 9616 551481911 551482044 9.910000e-60 243.0
30 TraesCS6B01G269100 chr1A 79.498 239 30 7 7596 7820 355629847 355629614 1.720000e-32 152.0
31 TraesCS6B01G269100 chr7B 99.265 136 1 0 9483 9618 7237634 7237499 7.660000e-61 246.0
32 TraesCS6B01G269100 chr2A 100.000 133 0 0 9483 9615 751753345 751753477 7.660000e-61 246.0
33 TraesCS6B01G269100 chr2A 90.303 165 15 1 480 643 722494957 722495121 2.160000e-51 215.0
34 TraesCS6B01G269100 chr2A 89.720 107 4 4 3752 3852 586454794 586454899 8.050000e-26 130.0
35 TraesCS6B01G269100 chr2A 88.235 51 4 2 664 714 744725154 744725202 1.070000e-04 60.2
36 TraesCS6B01G269100 chr5B 99.254 134 1 0 9483 9616 73827345 73827478 9.910000e-60 243.0
37 TraesCS6B01G269100 chr5B 91.262 103 3 3 3756 3852 211587221 211587323 1.730000e-27 135.0
38 TraesCS6B01G269100 chr5B 88.636 44 3 2 664 707 543227168 543227209 1.800000e-02 52.8
39 TraesCS6B01G269100 chr5A 99.254 134 1 0 9483 9616 582620745 582620878 9.910000e-60 243.0
40 TraesCS6B01G269100 chr5A 88.800 125 14 0 6213 6337 546806295 546806419 4.780000e-33 154.0
41 TraesCS6B01G269100 chr5A 91.262 103 3 3 3756 3852 214918594 214918696 1.730000e-27 135.0
42 TraesCS6B01G269100 chr5A 90.000 50 3 2 664 713 633269749 633269702 8.280000e-06 63.9
43 TraesCS6B01G269100 chr4A 99.254 134 1 0 9483 9616 709216554 709216421 9.910000e-60 243.0
44 TraesCS6B01G269100 chr2B 97.183 142 4 0 9474 9615 641195312 641195171 3.570000e-59 241.0
45 TraesCS6B01G269100 chr2B 90.303 165 15 1 478 641 478189635 478189799 2.160000e-51 215.0
46 TraesCS6B01G269100 chr2B 90.123 162 15 1 481 641 312294655 312294494 1.010000e-49 209.0
47 TraesCS6B01G269100 chr3D 91.358 162 13 1 481 641 546474263 546474102 4.640000e-53 220.0
48 TraesCS6B01G269100 chr3B 88.506 174 17 2 472 642 679988801 679988628 3.620000e-49 207.0
49 TraesCS6B01G269100 chr3B 94.118 34 2 0 680 713 111126584 111126551 1.800000e-02 52.8
50 TraesCS6B01G269100 chr4D 86.957 184 23 1 480 662 77835613 77835796 1.300000e-48 206.0
51 TraesCS6B01G269100 chr1D 79.916 239 29 7 7596 7820 284047139 284046906 3.690000e-34 158.0
52 TraesCS6B01G269100 chr1D 88.571 105 6 3 3754 3852 286385474 286385370 1.350000e-23 122.0
53 TraesCS6B01G269100 chr7D 90.909 44 2 2 680 722 474523958 474523916 3.850000e-04 58.4
54 TraesCS6B01G269100 chr4B 94.595 37 2 0 680 716 572171520 572171484 3.850000e-04 58.4
55 TraesCS6B01G269100 chr4B 94.118 34 2 0 680 713 465476799 465476766 1.800000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G269100 chr6B 484524873 484534750 9877 True 18242 18242 100.000000 1 9878 1 chr6B.!!$R2 9877
1 TraesCS6B01G269100 chr6D 336202225 336212174 9949 False 2856 8268 94.580800 1 9878 5 chr6D.!!$F1 9877
2 TraesCS6B01G269100 chr6A 475430099 475440517 10418 False 1589 4582 93.435889 1 9801 9 chr6A.!!$F3 9800
3 TraesCS6B01G269100 chr6A 10042204 10042868 664 True 872 872 90.237000 6299 6974 1 chr6A.!!$R1 675
4 TraesCS6B01G269100 chr5D 398367311 398367920 609 True 701 701 87.380000 5960 6581 1 chr5D.!!$R1 621
5 TraesCS6B01G269100 chr3A 177681886 177682411 525 False 549 549 85.481000 5534 6082 1 chr3A.!!$F1 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
935 1430 0.040425 GTTTCCACGCCATCACACAC 60.040 55.000 0.00 0.00 0.00 3.82 F
1254 1750 0.977395 CCTCCAACCTCCTCTTCGTT 59.023 55.000 0.00 0.00 0.00 3.85 F
1499 2007 1.725164 GCTTGTTCGACTAGGAAACCG 59.275 52.381 0.00 0.00 0.00 4.44 F
2724 3250 0.614979 ATAGCCTGTGTCGGACCAGT 60.615 55.000 18.79 9.09 0.00 4.00 F
3475 4038 1.486211 CTGGTCTCCCCTACGTGATT 58.514 55.000 0.00 0.00 0.00 2.57 F
4324 5066 0.700564 TACCGAGGGTCAGGTGTAGT 59.299 55.000 0.00 0.00 41.51 2.73 F
4453 5290 1.211703 TCAGCTCTTGTTGTCAACCCA 59.788 47.619 13.13 0.00 0.00 4.51 F
6094 7052 1.923204 GACTTGTCATGTAGCAGAGCG 59.077 52.381 0.00 0.00 0.00 5.03 F
7540 8729 0.102120 CCTTACAGAGAGAGCCAGCG 59.898 60.000 0.00 0.00 0.00 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2079 2603 1.550524 CGGATGGAGTCTTTGTCAGGA 59.449 52.381 0.00 0.0 0.00 3.86 R
2518 3044 2.186076 CACCATACGAGAGAACGAAGC 58.814 52.381 0.00 0.0 37.03 3.86 R
3171 3697 3.898482 AGCTTATGGTGTGGGATAAACC 58.102 45.455 0.00 0.0 38.08 3.27 R
3783 4346 0.813184 GTCATGGTTCTGGCACATGG 59.187 55.000 13.76 0.0 41.64 3.66 R
4820 5657 0.255890 GGAGTTGAGCTGGCCCATAA 59.744 55.000 0.00 0.0 0.00 1.90 R
6158 7280 2.501723 CCACTACCAGGACAATAGCAGT 59.498 50.000 0.00 0.0 0.00 4.40 R
6241 7363 8.192774 CACAAATGAAGCCAGTTATTATCATGT 58.807 33.333 0.00 0.0 0.00 3.21 R
8004 9213 0.036010 ACGGAGCTGGAAATGTCAGG 60.036 55.000 0.00 0.0 33.16 3.86 R
9515 10903 0.109342 CAGTGACTCAAAGGCAGGGT 59.891 55.000 0.00 0.0 30.96 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 263 2.988684 ATTTTCGCTTGCCCCGCA 60.989 55.556 0.00 0.00 36.47 5.69
104 293 9.541143 AGAACAAAAGAAAAGAAAAACACTGAA 57.459 25.926 0.00 0.00 0.00 3.02
114 303 5.200483 AGAAAAACACTGAATCCCACTTGA 58.800 37.500 0.00 0.00 0.00 3.02
175 364 0.452987 CCCTTGAATGTGATGTGCCG 59.547 55.000 0.00 0.00 0.00 5.69
203 392 9.823647 TTGAAGATTAAATAAAAGGCACACAAA 57.176 25.926 0.00 0.00 0.00 2.83
246 435 4.495422 AGTACTGAAATTACGAGGCACTG 58.505 43.478 0.00 0.00 41.55 3.66
416 605 3.758023 TCAAGTGTAATGCCCATGACTTG 59.242 43.478 11.46 11.46 40.97 3.16
431 620 6.096705 CCCATGACTTGGTATATTGCTTCAAA 59.903 38.462 6.62 0.00 44.83 2.69
447 636 6.455647 TGCTTCAAATCATATACTACCTCCG 58.544 40.000 0.00 0.00 0.00 4.63
453 642 8.358148 TCAAATCATATACTACCTCCGTTTCTC 58.642 37.037 0.00 0.00 0.00 2.87
476 665 8.708742 TCTCAATATAAAACGTTCTGACAGTTG 58.291 33.333 0.00 2.20 0.00 3.16
483 672 6.920569 AAACGTTCTGACAGTTGAAATACT 57.079 33.333 0.00 0.00 0.00 2.12
484 673 6.526566 AACGTTCTGACAGTTGAAATACTC 57.473 37.500 1.59 0.00 0.00 2.59
485 674 4.989168 ACGTTCTGACAGTTGAAATACTCC 59.011 41.667 1.59 0.00 0.00 3.85
486 675 4.389077 CGTTCTGACAGTTGAAATACTCCC 59.611 45.833 1.59 0.00 0.00 4.30
487 676 5.552178 GTTCTGACAGTTGAAATACTCCCT 58.448 41.667 1.59 0.00 0.00 4.20
488 677 5.407407 TCTGACAGTTGAAATACTCCCTC 57.593 43.478 1.59 0.00 0.00 4.30
489 678 4.082190 TCTGACAGTTGAAATACTCCCTCG 60.082 45.833 1.59 0.00 0.00 4.63
490 679 3.056107 TGACAGTTGAAATACTCCCTCGG 60.056 47.826 0.00 0.00 0.00 4.63
491 680 2.904434 ACAGTTGAAATACTCCCTCGGT 59.096 45.455 0.00 0.00 0.00 4.69
492 681 3.326880 ACAGTTGAAATACTCCCTCGGTT 59.673 43.478 0.00 0.00 0.00 4.44
493 682 3.933332 CAGTTGAAATACTCCCTCGGTTC 59.067 47.826 0.00 0.00 0.00 3.62
494 683 3.055312 AGTTGAAATACTCCCTCGGTTCC 60.055 47.826 0.00 0.00 0.00 3.62
495 684 2.829023 TGAAATACTCCCTCGGTTCCT 58.171 47.619 0.00 0.00 0.00 3.36
496 685 3.985127 TGAAATACTCCCTCGGTTCCTA 58.015 45.455 0.00 0.00 0.00 2.94
497 686 4.355549 TGAAATACTCCCTCGGTTCCTAA 58.644 43.478 0.00 0.00 0.00 2.69
498 687 4.778958 TGAAATACTCCCTCGGTTCCTAAA 59.221 41.667 0.00 0.00 0.00 1.85
499 688 5.427481 TGAAATACTCCCTCGGTTCCTAAAT 59.573 40.000 0.00 0.00 0.00 1.40
500 689 6.612456 TGAAATACTCCCTCGGTTCCTAAATA 59.388 38.462 0.00 0.00 0.00 1.40
501 690 7.291651 TGAAATACTCCCTCGGTTCCTAAATAT 59.708 37.037 0.00 0.00 0.00 1.28
502 691 8.731591 AAATACTCCCTCGGTTCCTAAATATA 57.268 34.615 0.00 0.00 0.00 0.86
503 692 8.731591 AATACTCCCTCGGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
504 693 6.667558 ACTCCCTCGGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
505 694 6.141790 ACTCCCTCGGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
506 695 6.267242 ACTCCCTCGGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
507 696 6.138263 TCCCTCGGTTCCTAAATATAAGTCA 58.862 40.000 0.00 0.00 0.00 3.41
508 697 6.785963 TCCCTCGGTTCCTAAATATAAGTCAT 59.214 38.462 0.00 0.00 0.00 3.06
509 698 7.291651 TCCCTCGGTTCCTAAATATAAGTCATT 59.708 37.037 0.00 0.00 0.00 2.57
510 699 7.387948 CCCTCGGTTCCTAAATATAAGTCATTG 59.612 40.741 0.00 0.00 0.00 2.82
511 700 7.931948 CCTCGGTTCCTAAATATAAGTCATTGT 59.068 37.037 0.00 0.00 0.00 2.71
512 701 9.976511 CTCGGTTCCTAAATATAAGTCATTGTA 57.023 33.333 0.00 0.00 0.00 2.41
513 702 9.976511 TCGGTTCCTAAATATAAGTCATTGTAG 57.023 33.333 0.00 0.00 0.00 2.74
514 703 9.976511 CGGTTCCTAAATATAAGTCATTGTAGA 57.023 33.333 0.00 0.00 0.00 2.59
527 716 8.954950 AAGTCATTGTAGAGATTTCACTATGG 57.045 34.615 8.82 0.00 0.00 2.74
528 717 8.311395 AGTCATTGTAGAGATTTCACTATGGA 57.689 34.615 8.82 0.00 0.00 3.41
529 718 8.200792 AGTCATTGTAGAGATTTCACTATGGAC 58.799 37.037 8.82 0.00 0.00 4.02
530 719 7.439655 GTCATTGTAGAGATTTCACTATGGACC 59.560 40.741 8.82 0.00 0.00 4.46
531 720 6.867519 TTGTAGAGATTTCACTATGGACCA 57.132 37.500 0.00 0.00 0.00 4.02
532 721 6.222038 TGTAGAGATTTCACTATGGACCAC 57.778 41.667 0.00 0.00 0.00 4.16
533 722 5.719563 TGTAGAGATTTCACTATGGACCACA 59.280 40.000 0.00 0.00 0.00 4.17
534 723 5.965033 AGAGATTTCACTATGGACCACAT 57.035 39.130 0.00 0.00 43.68 3.21
535 724 7.563556 TGTAGAGATTTCACTATGGACCACATA 59.436 37.037 0.00 0.00 41.03 2.29
536 725 7.623999 AGAGATTTCACTATGGACCACATAT 57.376 36.000 0.00 0.00 41.07 1.78
537 726 7.448420 AGAGATTTCACTATGGACCACATATG 58.552 38.462 0.00 0.00 41.07 1.78
538 727 7.071698 AGAGATTTCACTATGGACCACATATGT 59.928 37.037 1.41 1.41 41.07 2.29
539 728 8.262601 AGATTTCACTATGGACCACATATGTA 57.737 34.615 8.32 0.00 41.07 2.29
540 729 8.884323 AGATTTCACTATGGACCACATATGTAT 58.116 33.333 8.32 0.00 41.07 2.29
541 730 8.853077 ATTTCACTATGGACCACATATGTATG 57.147 34.615 8.32 5.55 41.07 2.39
543 732 8.485578 TTCACTATGGACCACATATGTATGTA 57.514 34.615 8.32 0.00 44.57 2.29
544 733 8.664669 TCACTATGGACCACATATGTATGTAT 57.335 34.615 8.32 3.63 44.57 2.29
545 734 9.762381 TCACTATGGACCACATATGTATGTATA 57.238 33.333 8.32 4.52 44.57 1.47
552 741 9.698309 GGACCACATATGTATGTATATAGATGC 57.302 37.037 8.32 2.10 44.57 3.91
584 773 8.814038 AGTGTAGATTCATTTATTTTGCTCCT 57.186 30.769 0.00 0.00 0.00 3.69
585 774 9.247861 AGTGTAGATTCATTTATTTTGCTCCTT 57.752 29.630 0.00 0.00 0.00 3.36
591 780 9.252962 GATTCATTTATTTTGCTCCTTATGTGG 57.747 33.333 0.00 0.00 0.00 4.17
592 781 7.716799 TCATTTATTTTGCTCCTTATGTGGT 57.283 32.000 0.00 0.00 0.00 4.16
593 782 7.771183 TCATTTATTTTGCTCCTTATGTGGTC 58.229 34.615 0.00 0.00 0.00 4.02
594 783 6.524101 TTTATTTTGCTCCTTATGTGGTCC 57.476 37.500 0.00 0.00 0.00 4.46
595 784 3.517296 TTTTGCTCCTTATGTGGTCCA 57.483 42.857 0.00 0.00 0.00 4.02
596 785 3.737559 TTTGCTCCTTATGTGGTCCAT 57.262 42.857 0.00 0.00 37.58 3.41
597 786 4.853468 TTTGCTCCTTATGTGGTCCATA 57.147 40.909 0.00 0.00 34.86 2.74
598 787 4.422073 TTGCTCCTTATGTGGTCCATAG 57.578 45.455 0.00 0.00 37.34 2.23
599 788 3.384168 TGCTCCTTATGTGGTCCATAGT 58.616 45.455 0.00 0.00 37.34 2.12
600 789 4.552674 TGCTCCTTATGTGGTCCATAGTA 58.447 43.478 0.00 0.00 37.34 1.82
601 790 4.966168 TGCTCCTTATGTGGTCCATAGTAA 59.034 41.667 0.00 0.00 37.34 2.24
602 791 5.427157 TGCTCCTTATGTGGTCCATAGTAAA 59.573 40.000 0.00 0.00 37.34 2.01
603 792 6.069905 TGCTCCTTATGTGGTCCATAGTAAAA 60.070 38.462 0.00 0.00 37.34 1.52
604 793 6.483640 GCTCCTTATGTGGTCCATAGTAAAAG 59.516 42.308 0.00 0.00 37.34 2.27
605 794 6.354130 TCCTTATGTGGTCCATAGTAAAAGC 58.646 40.000 0.00 0.00 37.34 3.51
606 795 6.157994 TCCTTATGTGGTCCATAGTAAAAGCT 59.842 38.462 0.00 0.00 37.34 3.74
607 796 6.828785 CCTTATGTGGTCCATAGTAAAAGCTT 59.171 38.462 0.00 0.00 37.34 3.74
608 797 7.339466 CCTTATGTGGTCCATAGTAAAAGCTTT 59.661 37.037 5.69 5.69 37.34 3.51
609 798 8.644374 TTATGTGGTCCATAGTAAAAGCTTTT 57.356 30.769 26.50 26.50 37.34 2.27
610 799 6.569179 TGTGGTCCATAGTAAAAGCTTTTC 57.431 37.500 27.03 17.85 0.00 2.29
611 800 6.065374 TGTGGTCCATAGTAAAAGCTTTTCA 58.935 36.000 27.03 14.29 0.00 2.69
612 801 6.547880 TGTGGTCCATAGTAAAAGCTTTTCAA 59.452 34.615 27.03 14.26 0.00 2.69
613 802 7.068839 TGTGGTCCATAGTAAAAGCTTTTCAAA 59.931 33.333 27.03 13.92 0.00 2.69
614 803 7.595130 GTGGTCCATAGTAAAAGCTTTTCAAAG 59.405 37.037 27.03 14.20 39.03 2.77
615 804 7.504238 TGGTCCATAGTAAAAGCTTTTCAAAGA 59.496 33.333 27.03 14.56 38.28 2.52
616 805 7.808381 GGTCCATAGTAAAAGCTTTTCAAAGAC 59.192 37.037 27.03 22.79 38.28 3.01
617 806 8.568794 GTCCATAGTAAAAGCTTTTCAAAGACT 58.431 33.333 27.03 23.87 38.28 3.24
618 807 9.131791 TCCATAGTAAAAGCTTTTCAAAGACTT 57.868 29.630 27.03 12.25 38.28 3.01
651 840 7.570607 AGAATCAGAGGGAGTATTTAGGAACAT 59.429 37.037 0.00 0.00 0.00 2.71
657 846 7.511028 AGAGGGAGTATTTAGGAACATAGGAAG 59.489 40.741 0.00 0.00 0.00 3.46
795 984 5.239306 CACTACCACAATGATTTGCCGATAT 59.761 40.000 0.00 0.00 36.22 1.63
798 987 3.228749 CACAATGATTTGCCGATATCGC 58.771 45.455 19.78 14.85 36.22 4.58
853 1348 1.007387 CAACAGCCGCAAGTTTCCC 60.007 57.895 0.00 0.00 0.00 3.97
934 1429 1.169661 GGTTTCCACGCCATCACACA 61.170 55.000 0.00 0.00 0.00 3.72
935 1430 0.040425 GTTTCCACGCCATCACACAC 60.040 55.000 0.00 0.00 0.00 3.82
1254 1750 0.977395 CCTCCAACCTCCTCTTCGTT 59.023 55.000 0.00 0.00 0.00 3.85
1379 1876 4.164988 CCTTCCTTCCATCCTTGTCTACAT 59.835 45.833 0.00 0.00 0.00 2.29
1385 1882 2.483714 CCATCCTTGTCTACATGGGTCG 60.484 54.545 13.37 0.00 40.45 4.79
1412 1919 3.874543 CCGTTTCGGGTGAATCATGAATA 59.125 43.478 0.00 0.00 44.15 1.75
1499 2007 1.725164 GCTTGTTCGACTAGGAAACCG 59.275 52.381 0.00 0.00 0.00 4.44
1528 2036 2.693074 TGTAAGCGGATCTGCAGATGTA 59.307 45.455 33.33 13.79 37.31 2.29
1752 2260 3.409026 AGTTTGAAGGCGAGAATGAGT 57.591 42.857 0.00 0.00 0.00 3.41
1861 2384 3.622166 TTACCCAAGTACCTTAGCAGC 57.378 47.619 0.00 0.00 0.00 5.25
1923 2446 3.978876 GGCACCCCTTGTTACTCAT 57.021 52.632 0.00 0.00 0.00 2.90
2202 2726 9.825972 CAACTTAATTAATATTCAGGCATACCG 57.174 33.333 0.00 0.00 42.76 4.02
2465 2991 5.367302 TCAGTGACAATGAATGTTGAGTGA 58.633 37.500 2.50 0.00 44.12 3.41
2518 3044 1.761784 CCTCCTCACCATCCTCTTCAG 59.238 57.143 0.00 0.00 0.00 3.02
2588 3114 7.232118 AGAAGTTTAAATTAGCAGCCACAAT 57.768 32.000 0.00 0.00 0.00 2.71
2595 3121 1.825090 TAGCAGCCACAATTGTCTGG 58.175 50.000 22.07 16.77 0.00 3.86
2668 3194 7.129109 AGTTACGGATTATATCAATTTGCCG 57.871 36.000 0.00 0.00 42.85 5.69
2724 3250 0.614979 ATAGCCTGTGTCGGACCAGT 60.615 55.000 18.79 9.09 0.00 4.00
2831 3357 8.512138 ACTCTTTATTTGGCAACTGTTGTATAC 58.488 33.333 20.57 10.14 37.61 1.47
2857 3383 9.708222 CCATCGAGACAAGATAAAAATAACAAG 57.292 33.333 0.00 0.00 0.00 3.16
2882 3408 8.322091 AGCACTTAACAATAGGTCTAGTTCAAT 58.678 33.333 0.00 0.00 0.00 2.57
3013 3539 5.571784 GATGCAATCCTGTCTTTCATTCA 57.428 39.130 0.00 0.00 37.38 2.57
3066 3592 7.496529 TGAAAGGAGTTTCTTGTGTATTCTG 57.503 36.000 0.01 0.00 42.39 3.02
3123 3649 5.980698 ACGTCATTCTGCTAGATCAAATG 57.019 39.130 0.00 0.00 0.00 2.32
3171 3697 4.752101 GGGGACATGTCAATCTCTTTATCG 59.248 45.833 26.47 0.00 0.00 2.92
3172 3698 4.752101 GGGACATGTCAATCTCTTTATCGG 59.248 45.833 26.47 0.00 0.00 4.18
3173 3699 5.360591 GGACATGTCAATCTCTTTATCGGT 58.639 41.667 26.47 0.00 0.00 4.69
3174 3700 5.817816 GGACATGTCAATCTCTTTATCGGTT 59.182 40.000 26.47 0.00 0.00 4.44
3175 3701 6.316390 GGACATGTCAATCTCTTTATCGGTTT 59.684 38.462 26.47 0.00 0.00 3.27
3176 3702 7.494625 GGACATGTCAATCTCTTTATCGGTTTA 59.505 37.037 26.47 0.00 0.00 2.01
3177 3703 8.964476 ACATGTCAATCTCTTTATCGGTTTAT 57.036 30.769 0.00 0.00 0.00 1.40
3178 3704 9.046296 ACATGTCAATCTCTTTATCGGTTTATC 57.954 33.333 0.00 0.00 0.00 1.75
3228 3759 7.420800 CACTATAGGAAATCCATCAAAAGCAC 58.579 38.462 4.43 0.00 38.89 4.40
3408 3971 5.989477 TGTTTCATCTGTGGTATCCTAAGG 58.011 41.667 0.00 0.00 0.00 2.69
3475 4038 1.486211 CTGGTCTCCCCTACGTGATT 58.514 55.000 0.00 0.00 0.00 2.57
3552 4115 8.094798 TCTGAGCACTATTCGTTTTAATGTTT 57.905 30.769 0.00 0.00 0.00 2.83
3594 4157 9.309516 CGTAGTCTACTTGCATAAAGGATAAAA 57.690 33.333 8.37 0.00 40.51 1.52
3621 4184 8.426489 TGGTTATATATTGTCGGCTAGTTCTTT 58.574 33.333 0.00 0.00 0.00 2.52
3781 4344 4.954118 ACAGGGGTGCGTGGGAGA 62.954 66.667 0.00 0.00 0.00 3.71
3783 4346 3.083997 AGGGGTGCGTGGGAGATC 61.084 66.667 0.00 0.00 0.00 2.75
3840 4582 8.064336 TCTTATGGGTTTCAACTCTAGTCTAC 57.936 38.462 0.00 0.00 0.00 2.59
3844 4586 3.119209 GGTTTCAACTCTAGTCTACCCCG 60.119 52.174 0.00 0.00 0.00 5.73
3853 4595 5.121380 TCTAGTCTACCCCGACTTGTTAT 57.879 43.478 0.00 0.00 41.27 1.89
3985 4727 7.642071 TTAACACATTCGGAGTTACTTACAC 57.358 36.000 0.00 0.00 0.00 2.90
3994 4736 7.647907 TCGGAGTTACTTACACATTTTCTTC 57.352 36.000 0.00 0.00 0.00 2.87
4042 4784 4.754667 GGGGACGCGTGGAAGGAC 62.755 72.222 20.70 0.00 0.00 3.85
4280 5022 5.422214 AACAGTGTTCTCTCGGGATATTT 57.578 39.130 1.64 0.00 0.00 1.40
4304 5046 6.603940 TTTAGTAGCCAAAATGATGCCTTT 57.396 33.333 0.00 0.00 0.00 3.11
4314 5056 0.988832 TGATGCCTTTTACCGAGGGT 59.011 50.000 0.00 0.00 40.16 4.34
4324 5066 0.700564 TACCGAGGGTCAGGTGTAGT 59.299 55.000 0.00 0.00 41.51 2.73
4422 5164 4.877282 TGCAGGTACAAAATAAACCTTGC 58.123 39.130 0.00 0.00 41.75 4.01
4444 5281 1.322442 GCCAAACCTCAGCTCTTGTT 58.678 50.000 0.00 0.00 0.00 2.83
4453 5290 1.211703 TCAGCTCTTGTTGTCAACCCA 59.788 47.619 13.13 0.00 0.00 4.51
4472 5309 2.419673 CCACTGCGAATAACATCAAGCA 59.580 45.455 0.00 0.00 0.00 3.91
4500 5337 4.723789 TCCTATGCCTTCTCAGAATTCCTT 59.276 41.667 0.65 0.00 0.00 3.36
4820 5657 7.884877 TCCTGATTTTGTATGATCTTCAACAGT 59.115 33.333 0.00 0.00 0.00 3.55
5253 6090 7.055667 TCTTGATATTCCAGTAGACCATCAC 57.944 40.000 0.00 0.00 28.99 3.06
5260 6097 5.854010 TCCAGTAGACCATCACTGTTATC 57.146 43.478 0.00 0.00 40.47 1.75
5312 6149 8.825745 GCTTTTTCATCAAATTTTGGTGTTCTA 58.174 29.630 19.18 0.64 42.39 2.10
5404 6357 9.523168 TTTTGCTTACCAGTTACCACTATTAAT 57.477 29.630 0.00 0.00 0.00 1.40
5693 6646 5.977129 TCTGTACATGTACATTATGCACTCG 59.023 40.000 32.97 19.59 44.15 4.18
6066 7024 9.967451 TTTATCATTAATAGTTCCTGTTCACCA 57.033 29.630 0.00 0.00 0.00 4.17
6094 7052 1.923204 GACTTGTCATGTAGCAGAGCG 59.077 52.381 0.00 0.00 0.00 5.03
6158 7280 7.200434 AGAATGCTCTAGTGGGAATTTAGAA 57.800 36.000 0.00 0.00 0.00 2.10
6240 7362 3.983344 GTCATTGCAAACTCGCATTTTCT 59.017 39.130 1.71 0.00 42.62 2.52
6241 7363 5.153513 GTCATTGCAAACTCGCATTTTCTA 58.846 37.500 1.71 0.00 42.62 2.10
6262 7384 9.851686 TTTCTACATGATAATAACTGGCTTCAT 57.148 29.630 0.00 0.00 0.00 2.57
6327 7449 6.293298 GCTTGTGATGATTGATACTTAGCCAG 60.293 42.308 0.00 0.00 0.00 4.85
6364 7486 3.758554 GCTTGTGATGGTTGATACTTGGT 59.241 43.478 0.00 0.00 0.00 3.67
6528 7650 4.932200 CCTGACATTTCTGAGGTGTACTTC 59.068 45.833 0.00 0.00 0.00 3.01
6637 7759 1.742768 CCTCCGCACTATCCTGTCC 59.257 63.158 0.00 0.00 0.00 4.02
6752 7874 4.881850 ACCCTGTAGAAACTGAAAACACAG 59.118 41.667 0.00 0.00 42.78 3.66
6773 7895 3.759086 AGTCTGATCAGTTCGCTTGTCTA 59.241 43.478 21.92 0.00 0.00 2.59
6806 7928 4.640771 TCTGTGCACCTAAATTTCTCCT 57.359 40.909 15.69 0.00 0.00 3.69
6997 8119 6.855763 AGCAAAGTTTCCATTTGGATCATA 57.144 33.333 0.00 0.00 44.98 2.15
7014 8136 5.182001 GGATCATAATGTGCCACCAGAATAC 59.818 44.000 0.00 0.00 0.00 1.89
7103 8225 5.231147 CCATTGAACAAACGTACTTTGGTTG 59.769 40.000 9.44 2.80 40.09 3.77
7111 8233 1.070175 CGTACTTTGGTTGTTCGCCAG 60.070 52.381 0.00 0.00 37.31 4.85
7118 8240 1.009675 GTTGTTCGCCAGTGCACAG 60.010 57.895 21.04 11.53 37.32 3.66
7237 8360 3.893753 TCTGAATCCCAAAACTTCCCA 57.106 42.857 0.00 0.00 0.00 4.37
7322 8498 2.217038 AGCTTCCGTCAGGCCTTCA 61.217 57.895 0.00 0.00 37.47 3.02
7325 8501 1.831652 CTTCCGTCAGGCCTTCACCT 61.832 60.000 0.00 0.00 42.30 4.00
7402 8591 0.106217 CGCCCCCTCCCAAATTACAT 60.106 55.000 0.00 0.00 0.00 2.29
7419 8608 8.272173 CAAATTACATAAAACCTAGAGGGGAGA 58.728 37.037 0.00 0.00 40.27 3.71
7452 8641 0.389166 CAAGACCTCGGTGACAGCTC 60.389 60.000 2.72 0.00 0.00 4.09
7457 8646 1.216710 CTCGGTGACAGCTCCCTTC 59.783 63.158 2.72 0.00 0.00 3.46
7524 8713 4.621087 GCACCCCTTGTGGCCCTT 62.621 66.667 0.00 0.00 45.55 3.95
7533 8722 1.902508 CTTGTGGCCCTTACAGAGAGA 59.097 52.381 0.00 0.00 0.00 3.10
7534 8723 1.561643 TGTGGCCCTTACAGAGAGAG 58.438 55.000 0.00 0.00 0.00 3.20
7535 8724 0.176910 GTGGCCCTTACAGAGAGAGC 59.823 60.000 0.00 0.00 0.00 4.09
7536 8725 0.978146 TGGCCCTTACAGAGAGAGCC 60.978 60.000 0.00 0.00 39.41 4.70
7537 8726 0.978146 GGCCCTTACAGAGAGAGCCA 60.978 60.000 0.00 0.00 38.79 4.75
7538 8727 0.463620 GCCCTTACAGAGAGAGCCAG 59.536 60.000 0.00 0.00 0.00 4.85
7539 8728 0.463620 CCCTTACAGAGAGAGCCAGC 59.536 60.000 0.00 0.00 0.00 4.85
7540 8729 0.102120 CCTTACAGAGAGAGCCAGCG 59.898 60.000 0.00 0.00 0.00 5.18
7541 8730 1.098869 CTTACAGAGAGAGCCAGCGA 58.901 55.000 0.00 0.00 0.00 4.93
7542 8731 0.811915 TTACAGAGAGAGCCAGCGAC 59.188 55.000 0.00 0.00 0.00 5.19
7543 8732 0.322546 TACAGAGAGAGCCAGCGACA 60.323 55.000 0.00 0.00 0.00 4.35
7544 8733 1.181741 ACAGAGAGAGCCAGCGACAA 61.182 55.000 0.00 0.00 0.00 3.18
7545 8734 0.175302 CAGAGAGAGCCAGCGACAAT 59.825 55.000 0.00 0.00 0.00 2.71
7546 8735 0.175302 AGAGAGAGCCAGCGACAATG 59.825 55.000 0.00 0.00 0.00 2.82
7547 8736 0.174389 GAGAGAGCCAGCGACAATGA 59.826 55.000 0.00 0.00 0.00 2.57
7548 8737 0.108424 AGAGAGCCAGCGACAATGAC 60.108 55.000 0.00 0.00 0.00 3.06
7558 8747 1.086067 CGACAATGACAGCCAGCGAT 61.086 55.000 0.00 0.00 0.00 4.58
7565 8770 0.175760 GACAGCCAGCGATGAGGTTA 59.824 55.000 0.06 0.00 0.00 2.85
7576 8781 2.093181 CGATGAGGTTAACATGGGTCCA 60.093 50.000 8.10 0.00 0.00 4.02
7628 8833 0.666374 GAGGTAGAAGAGGAGCGAGC 59.334 60.000 0.00 0.00 0.00 5.03
7629 8834 1.098712 AGGTAGAAGAGGAGCGAGCG 61.099 60.000 0.00 0.00 0.00 5.03
7630 8835 1.096386 GGTAGAAGAGGAGCGAGCGA 61.096 60.000 0.00 0.00 0.00 4.93
7631 8836 0.306533 GTAGAAGAGGAGCGAGCGAG 59.693 60.000 0.00 0.00 0.00 5.03
7713 8918 4.137543 GACATTGAAGGTGGTTCTGTTCT 58.862 43.478 0.00 0.00 35.99 3.01
7778 8983 2.232452 AGACCACCAGATTCAGTTCGAG 59.768 50.000 0.00 0.00 0.00 4.04
7848 9053 5.753438 GTCGCTGATATGAATGGTGTCTTTA 59.247 40.000 0.00 0.00 0.00 1.85
7937 9143 1.068541 GCCTGTCCAAATGAACCGTTC 60.069 52.381 4.18 4.18 0.00 3.95
7977 9186 6.073548 GCAGTTGAGGACGAAGATTATAATGG 60.074 42.308 1.78 0.00 0.00 3.16
8004 9213 2.611292 CTGATTCGAGTTTGGCCATCTC 59.389 50.000 21.43 21.43 0.00 2.75
8013 9222 2.827921 GTTTGGCCATCTCCTGACATTT 59.172 45.455 6.09 0.00 0.00 2.32
8066 9275 0.874390 GTCAATCACCGAAGCTTGCA 59.126 50.000 2.10 0.00 0.00 4.08
8077 9286 3.136763 CGAAGCTTGCATCTATCCACAT 58.863 45.455 2.10 0.00 0.00 3.21
8079 9288 4.387598 GAAGCTTGCATCTATCCACATCT 58.612 43.478 2.10 0.00 0.00 2.90
8216 9551 5.422878 CAAATAAGCAAAGCACGTTTGTTC 58.577 37.500 0.82 0.00 46.44 3.18
8217 9552 2.645730 AAGCAAAGCACGTTTGTTCA 57.354 40.000 0.82 0.00 46.44 3.18
8218 9553 2.645730 AGCAAAGCACGTTTGTTCAA 57.354 40.000 0.82 0.00 46.44 2.69
8219 9554 3.163630 AGCAAAGCACGTTTGTTCAAT 57.836 38.095 0.82 0.00 46.44 2.57
8220 9555 2.859538 AGCAAAGCACGTTTGTTCAATG 59.140 40.909 0.82 0.00 46.44 2.82
8221 9556 2.033832 GCAAAGCACGTTTGTTCAATGG 60.034 45.455 0.82 0.00 46.44 3.16
8222 9557 1.851658 AAGCACGTTTGTTCAATGGC 58.148 45.000 0.00 0.00 0.00 4.40
8223 9558 0.743688 AGCACGTTTGTTCAATGGCA 59.256 45.000 0.00 0.00 0.00 4.92
8224 9559 1.135915 AGCACGTTTGTTCAATGGCAA 59.864 42.857 0.00 0.00 0.00 4.52
8225 9560 2.134346 GCACGTTTGTTCAATGGCAAT 58.866 42.857 0.00 0.00 0.00 3.56
8226 9561 2.543430 GCACGTTTGTTCAATGGCAATT 59.457 40.909 0.00 0.00 0.00 2.32
8227 9562 3.002144 GCACGTTTGTTCAATGGCAATTT 59.998 39.130 0.00 0.00 0.00 1.82
8228 9563 4.495514 GCACGTTTGTTCAATGGCAATTTT 60.496 37.500 0.00 0.00 0.00 1.82
8314 9649 5.880054 ACGATTAATGTCTTTTGTGGAGG 57.120 39.130 0.00 0.00 0.00 4.30
8402 9737 7.272978 TCTAGTATGTGGAACTTATGCCTTTC 58.727 38.462 0.00 0.00 38.04 2.62
8505 9843 4.615513 AGACCTTAGCATCCTACAAGAGT 58.384 43.478 0.00 0.00 0.00 3.24
8894 10234 8.125448 GGCTCTATTCAAACTGATGTGTATTTC 58.875 37.037 0.00 0.00 0.00 2.17
8905 10245 1.349688 TGTGTATTTCCGCACCTTCCT 59.650 47.619 0.00 0.00 34.94 3.36
9119 10490 2.086054 AGACAACGAATGAGTGCTCC 57.914 50.000 0.00 0.00 0.00 4.70
9151 10522 1.488261 GGTGCTATAGCGGCGTGAAC 61.488 60.000 19.55 10.00 45.83 3.18
9153 10524 1.227147 GCTATAGCGGCGTGAACCA 60.227 57.895 9.40 0.00 0.00 3.67
9484 10872 0.032540 TGATGATCTGATCCCGCACG 59.967 55.000 14.71 0.00 0.00 5.34
9485 10873 0.032678 GATGATCTGATCCCGCACGT 59.967 55.000 14.71 0.00 0.00 4.49
9486 10874 0.249615 ATGATCTGATCCCGCACGTG 60.250 55.000 12.28 12.28 0.00 4.49
9487 10875 1.592669 GATCTGATCCCGCACGTGG 60.593 63.158 18.88 7.38 0.00 4.94
9488 10876 2.016393 GATCTGATCCCGCACGTGGA 62.016 60.000 18.88 6.63 36.05 4.02
9489 10877 1.402896 ATCTGATCCCGCACGTGGAT 61.403 55.000 18.88 11.84 45.32 3.41
9492 10880 2.764128 ATCCCGCACGTGGATCCT 60.764 61.111 18.88 0.00 38.20 3.24
9493 10881 2.797278 ATCCCGCACGTGGATCCTC 61.797 63.158 18.88 8.71 38.20 3.71
9494 10882 3.461773 CCCGCACGTGGATCCTCT 61.462 66.667 18.88 0.00 0.00 3.69
9495 10883 2.202797 CCGCACGTGGATCCTCTG 60.203 66.667 18.88 10.46 0.00 3.35
9496 10884 2.710902 CCGCACGTGGATCCTCTGA 61.711 63.158 18.88 0.00 0.00 3.27
9497 10885 1.517257 CGCACGTGGATCCTCTGAC 60.517 63.158 18.88 1.17 0.00 3.51
9498 10886 1.893786 GCACGTGGATCCTCTGACT 59.106 57.895 18.88 0.00 0.00 3.41
9499 10887 0.247736 GCACGTGGATCCTCTGACTT 59.752 55.000 18.88 0.00 0.00 3.01
9500 10888 1.338200 GCACGTGGATCCTCTGACTTT 60.338 52.381 18.88 0.00 0.00 2.66
9501 10889 2.341257 CACGTGGATCCTCTGACTTTG 58.659 52.381 14.23 0.00 0.00 2.77
9502 10890 1.338200 ACGTGGATCCTCTGACTTTGC 60.338 52.381 14.23 0.00 0.00 3.68
9503 10891 1.338105 CGTGGATCCTCTGACTTTGCA 60.338 52.381 14.23 0.00 0.00 4.08
9504 10892 2.783135 GTGGATCCTCTGACTTTGCAA 58.217 47.619 14.23 0.00 0.00 4.08
9505 10893 3.350833 GTGGATCCTCTGACTTTGCAAT 58.649 45.455 14.23 0.00 0.00 3.56
9506 10894 3.376546 GTGGATCCTCTGACTTTGCAATC 59.623 47.826 14.23 0.00 0.00 2.67
9507 10895 2.948315 GGATCCTCTGACTTTGCAATCC 59.052 50.000 3.84 0.00 0.00 3.01
9508 10896 2.496899 TCCTCTGACTTTGCAATCCC 57.503 50.000 0.00 0.00 0.00 3.85
9509 10897 1.988107 TCCTCTGACTTTGCAATCCCT 59.012 47.619 0.00 0.00 0.00 4.20
9510 10898 2.089980 CCTCTGACTTTGCAATCCCTG 58.910 52.381 0.00 0.00 0.00 4.45
9518 10906 4.181051 GCAATCCCTGCCATACCC 57.819 61.111 0.00 0.00 46.13 3.69
9519 10907 1.538666 GCAATCCCTGCCATACCCT 59.461 57.895 0.00 0.00 46.13 4.34
9520 10908 0.825010 GCAATCCCTGCCATACCCTG 60.825 60.000 0.00 0.00 46.13 4.45
9521 10909 0.825010 CAATCCCTGCCATACCCTGC 60.825 60.000 0.00 0.00 0.00 4.85
9522 10910 2.011617 AATCCCTGCCATACCCTGCC 62.012 60.000 0.00 0.00 0.00 4.85
9523 10911 2.940421 ATCCCTGCCATACCCTGCCT 62.940 60.000 0.00 0.00 0.00 4.75
9524 10912 2.693871 CCCTGCCATACCCTGCCTT 61.694 63.158 0.00 0.00 0.00 4.35
9525 10913 1.307647 CCTGCCATACCCTGCCTTT 59.692 57.895 0.00 0.00 0.00 3.11
9526 10914 1.039233 CCTGCCATACCCTGCCTTTG 61.039 60.000 0.00 0.00 0.00 2.77
9527 10915 0.034186 CTGCCATACCCTGCCTTTGA 60.034 55.000 0.00 0.00 0.00 2.69
9528 10916 0.034186 TGCCATACCCTGCCTTTGAG 60.034 55.000 0.00 0.00 0.00 3.02
9529 10917 0.034089 GCCATACCCTGCCTTTGAGT 60.034 55.000 0.00 0.00 0.00 3.41
9530 10918 2.019156 GCCATACCCTGCCTTTGAGTC 61.019 57.143 0.00 0.00 0.00 3.36
9531 10919 1.281867 CCATACCCTGCCTTTGAGTCA 59.718 52.381 0.00 0.00 0.00 3.41
9532 10920 2.359900 CATACCCTGCCTTTGAGTCAC 58.640 52.381 0.00 0.00 0.00 3.67
9533 10921 1.729586 TACCCTGCCTTTGAGTCACT 58.270 50.000 0.00 0.00 0.00 3.41
9534 10922 0.109342 ACCCTGCCTTTGAGTCACTG 59.891 55.000 0.00 0.00 0.00 3.66
9535 10923 0.397941 CCCTGCCTTTGAGTCACTGA 59.602 55.000 0.00 0.00 0.00 3.41
9536 10924 1.517242 CCTGCCTTTGAGTCACTGAC 58.483 55.000 0.38 0.38 0.00 3.51
9537 10925 1.202687 CCTGCCTTTGAGTCACTGACA 60.203 52.381 11.80 0.00 34.60 3.58
9538 10926 2.141517 CTGCCTTTGAGTCACTGACAG 58.858 52.381 11.80 0.00 34.60 3.51
9539 10927 1.202687 TGCCTTTGAGTCACTGACAGG 60.203 52.381 11.80 9.87 34.60 4.00
9540 10928 1.202698 GCCTTTGAGTCACTGACAGGT 60.203 52.381 11.80 0.00 34.60 4.00
9541 10929 2.487934 CCTTTGAGTCACTGACAGGTG 58.512 52.381 11.80 3.26 38.44 4.00
9542 10930 2.487934 CTTTGAGTCACTGACAGGTGG 58.512 52.381 11.80 0.00 37.75 4.61
9543 10931 0.758734 TTGAGTCACTGACAGGTGGG 59.241 55.000 11.80 0.00 37.75 4.61
9544 10932 1.004440 GAGTCACTGACAGGTGGGC 60.004 63.158 11.80 0.00 37.75 5.36
9545 10933 2.032681 GTCACTGACAGGTGGGCC 59.967 66.667 7.51 0.00 37.75 5.80
9546 10934 3.249189 TCACTGACAGGTGGGCCC 61.249 66.667 17.59 17.59 37.75 5.80
9547 10935 4.351054 CACTGACAGGTGGGCCCC 62.351 72.222 22.27 10.91 33.95 5.80
9548 10936 4.918360 ACTGACAGGTGGGCCCCA 62.918 66.667 22.27 7.77 34.57 4.96
9549 10937 3.341629 CTGACAGGTGGGCCCCAT 61.342 66.667 22.27 5.27 35.28 4.00
9550 10938 2.000701 CTGACAGGTGGGCCCCATA 61.001 63.158 22.27 0.00 35.28 2.74
9551 10939 2.270874 CTGACAGGTGGGCCCCATAC 62.271 65.000 22.27 11.31 35.28 2.39
9552 10940 2.001269 GACAGGTGGGCCCCATACT 61.001 63.158 22.27 9.23 35.28 2.12
9553 10941 1.543896 ACAGGTGGGCCCCATACTT 60.544 57.895 22.27 4.01 35.28 2.24
9554 10942 1.146544 ACAGGTGGGCCCCATACTTT 61.147 55.000 22.27 1.84 35.28 2.66
9555 10943 0.684153 CAGGTGGGCCCCATACTTTG 60.684 60.000 22.27 10.01 35.28 2.77
9556 10944 1.146544 AGGTGGGCCCCATACTTTGT 61.147 55.000 22.27 0.00 35.28 2.83
9557 10945 0.970427 GGTGGGCCCCATACTTTGTG 60.970 60.000 22.27 0.00 35.28 3.33
9558 10946 0.970427 GTGGGCCCCATACTTTGTGG 60.970 60.000 22.27 0.00 35.28 4.17
9564 10952 3.168773 CCATACTTTGTGGGACCCG 57.831 57.895 5.91 0.00 32.98 5.28
9565 10953 0.326927 CCATACTTTGTGGGACCCGT 59.673 55.000 5.91 0.00 32.98 5.28
9566 10954 1.448985 CATACTTTGTGGGACCCGTG 58.551 55.000 5.91 0.00 0.00 4.94
9567 10955 1.061546 ATACTTTGTGGGACCCGTGT 58.938 50.000 5.91 2.69 0.00 4.49
9568 10956 0.107081 TACTTTGTGGGACCCGTGTG 59.893 55.000 5.91 0.00 0.00 3.82
9569 10957 1.153046 CTTTGTGGGACCCGTGTGT 60.153 57.895 5.91 0.00 0.00 3.72
9570 10958 1.153127 TTTGTGGGACCCGTGTGTC 60.153 57.895 5.91 0.00 34.42 3.67
9571 10959 1.911702 TTTGTGGGACCCGTGTGTCA 61.912 55.000 5.91 0.00 36.97 3.58
9572 10960 2.030562 GTGGGACCCGTGTGTCAG 59.969 66.667 5.91 0.00 36.97 3.51
9573 10961 2.445085 TGGGACCCGTGTGTCAGT 60.445 61.111 5.91 0.00 36.97 3.41
9574 10962 2.030562 GGGACCCGTGTGTCAGTG 59.969 66.667 0.00 0.00 36.97 3.66
9575 10963 2.504274 GGGACCCGTGTGTCAGTGA 61.504 63.158 0.00 0.00 36.97 3.41
9576 10964 1.300697 GGACCCGTGTGTCAGTGAC 60.301 63.158 16.68 16.68 36.97 3.67
9577 10965 1.740285 GACCCGTGTGTCAGTGACT 59.260 57.895 23.29 1.59 35.29 3.41
9578 10966 0.318784 GACCCGTGTGTCAGTGACTC 60.319 60.000 23.29 19.84 35.29 3.36
9579 10967 1.040893 ACCCGTGTGTCAGTGACTCA 61.041 55.000 23.29 22.13 34.38 3.41
9580 10968 0.104120 CCCGTGTGTCAGTGACTCAA 59.896 55.000 25.22 8.92 37.70 3.02
9581 10969 1.472552 CCCGTGTGTCAGTGACTCAAA 60.473 52.381 25.22 3.36 37.70 2.69
9582 10970 1.860950 CCGTGTGTCAGTGACTCAAAG 59.139 52.381 25.22 21.07 37.70 2.77
9583 10971 1.860950 CGTGTGTCAGTGACTCAAAGG 59.139 52.381 25.22 15.50 37.70 3.11
9584 10972 2.738643 CGTGTGTCAGTGACTCAAAGGT 60.739 50.000 25.22 0.00 37.70 3.50
9585 10973 3.490249 CGTGTGTCAGTGACTCAAAGGTA 60.490 47.826 25.22 3.57 37.70 3.08
9586 10974 4.051922 GTGTGTCAGTGACTCAAAGGTAG 58.948 47.826 25.22 0.00 37.70 3.18
9587 10975 3.069586 TGTGTCAGTGACTCAAAGGTAGG 59.930 47.826 22.30 0.00 33.95 3.18
9588 10976 2.037251 TGTCAGTGACTCAAAGGTAGGC 59.963 50.000 23.29 0.00 33.15 3.93
9589 10977 2.300437 GTCAGTGACTCAAAGGTAGGCT 59.700 50.000 16.26 0.00 0.00 4.58
9590 10978 2.972713 TCAGTGACTCAAAGGTAGGCTT 59.027 45.455 0.00 0.00 0.00 4.35
9591 10979 3.070018 CAGTGACTCAAAGGTAGGCTTG 58.930 50.000 0.00 0.00 0.00 4.01
9592 10980 2.039084 AGTGACTCAAAGGTAGGCTTGG 59.961 50.000 0.00 0.00 0.00 3.61
9593 10981 1.271379 TGACTCAAAGGTAGGCTTGGC 60.271 52.381 0.00 0.00 0.00 4.52
9610 10998 3.866582 CCACGGCAGGGGATCCTC 61.867 72.222 12.58 7.90 46.39 3.71
9611 10999 4.227134 CACGGCAGGGGATCCTCG 62.227 72.222 12.58 5.37 42.67 4.63
9612 11000 4.779733 ACGGCAGGGGATCCTCGT 62.780 66.667 12.58 11.06 42.67 4.18
9613 11001 3.917760 CGGCAGGGGATCCTCGTC 61.918 72.222 12.58 4.80 42.67 4.20
9626 11014 3.263503 CTCGTCCGTTCTGGTGCGA 62.264 63.158 0.00 0.00 41.30 5.10
9656 11044 3.181290 CGCATGCTTCGCAGTCGA 61.181 61.111 17.13 0.00 43.65 4.20
9657 11045 2.520039 CGCATGCTTCGCAGTCGAT 61.520 57.895 17.13 0.00 43.65 3.59
9658 11046 1.208642 CGCATGCTTCGCAGTCGATA 61.209 55.000 17.13 0.00 43.65 2.92
9659 11047 0.930310 GCATGCTTCGCAGTCGATAA 59.070 50.000 11.37 0.00 43.65 1.75
9660 11048 1.528586 GCATGCTTCGCAGTCGATAAT 59.471 47.619 11.37 0.00 43.65 1.28
9661 11049 2.661169 GCATGCTTCGCAGTCGATAATG 60.661 50.000 11.37 0.00 43.65 1.90
9662 11050 0.930310 TGCTTCGCAGTCGATAATGC 59.070 50.000 9.44 9.44 45.04 3.56
9663 11051 1.212616 GCTTCGCAGTCGATAATGCT 58.787 50.000 15.36 0.00 45.04 3.79
9664 11052 1.594862 GCTTCGCAGTCGATAATGCTT 59.405 47.619 15.36 0.00 45.04 3.91
9665 11053 2.348032 GCTTCGCAGTCGATAATGCTTC 60.348 50.000 15.36 2.28 45.04 3.86
9696 11088 5.338381 CCTTTCCTATAGCACACCAGAGAAA 60.338 44.000 0.00 0.00 0.00 2.52
9769 11262 3.328382 TTAGCTGCTACCACGTTCAAT 57.672 42.857 9.27 0.00 0.00 2.57
9858 11353 1.570501 AGCCCATCTTGCCCTTCAATA 59.429 47.619 0.00 0.00 33.57 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
104 293 6.131264 TCATGAAATTATGCTCAAGTGGGAT 58.869 36.000 0.00 0.00 0.00 3.85
140 329 3.593442 AAGGGTTCCTTGTTCATGTCA 57.407 42.857 0.00 0.00 42.96 3.58
175 364 9.255304 TGTGTGCCTTTTATTTAATCTTCAAAC 57.745 29.630 0.00 0.00 0.00 2.93
264 453 5.103687 TGTCGTATATGCACACGTACATTT 58.896 37.500 14.65 0.00 39.18 2.32
431 620 7.834881 TTGAGAAACGGAGGTAGTATATGAT 57.165 36.000 0.00 0.00 0.00 2.45
447 636 9.530129 CTGTCAGAACGTTTTATATTGAGAAAC 57.470 33.333 0.46 0.00 0.00 2.78
453 642 9.658475 TTTCAACTGTCAGAACGTTTTATATTG 57.342 29.630 6.91 2.60 0.00 1.90
466 655 4.082190 CGAGGGAGTATTTCAACTGTCAGA 60.082 45.833 6.91 0.00 0.00 3.27
467 656 4.177026 CGAGGGAGTATTTCAACTGTCAG 58.823 47.826 0.00 0.00 0.00 3.51
476 665 5.349061 TTTAGGAACCGAGGGAGTATTTC 57.651 43.478 0.00 0.00 0.00 2.17
480 669 7.300658 ACTTATATTTAGGAACCGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
481 670 6.141790 ACTTATATTTAGGAACCGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
482 671 6.267014 TGACTTATATTTAGGAACCGAGGGAG 59.733 42.308 0.00 0.00 0.00 4.30
483 672 6.138263 TGACTTATATTTAGGAACCGAGGGA 58.862 40.000 0.00 0.00 0.00 4.20
484 673 6.415206 TGACTTATATTTAGGAACCGAGGG 57.585 41.667 0.00 0.00 0.00 4.30
485 674 7.931948 ACAATGACTTATATTTAGGAACCGAGG 59.068 37.037 0.00 0.00 0.00 4.63
486 675 8.888579 ACAATGACTTATATTTAGGAACCGAG 57.111 34.615 0.00 0.00 0.00 4.63
487 676 9.976511 CTACAATGACTTATATTTAGGAACCGA 57.023 33.333 0.00 0.00 0.00 4.69
488 677 9.976511 TCTACAATGACTTATATTTAGGAACCG 57.023 33.333 0.00 0.00 0.00 4.44
502 691 8.762645 TCCATAGTGAAATCTCTACAATGACTT 58.237 33.333 0.00 0.00 0.00 3.01
503 692 8.200792 GTCCATAGTGAAATCTCTACAATGACT 58.799 37.037 0.00 0.00 0.00 3.41
504 693 7.439655 GGTCCATAGTGAAATCTCTACAATGAC 59.560 40.741 0.00 0.00 0.00 3.06
505 694 7.125659 TGGTCCATAGTGAAATCTCTACAATGA 59.874 37.037 0.00 0.00 0.00 2.57
506 695 7.225538 GTGGTCCATAGTGAAATCTCTACAATG 59.774 40.741 0.00 0.00 0.00 2.82
507 696 7.092891 TGTGGTCCATAGTGAAATCTCTACAAT 60.093 37.037 0.00 0.00 0.00 2.71
508 697 6.212589 TGTGGTCCATAGTGAAATCTCTACAA 59.787 38.462 0.00 0.00 0.00 2.41
509 698 5.719563 TGTGGTCCATAGTGAAATCTCTACA 59.280 40.000 0.00 0.00 0.00 2.74
510 699 6.222038 TGTGGTCCATAGTGAAATCTCTAC 57.778 41.667 0.00 0.00 0.00 2.59
511 700 8.588472 CATATGTGGTCCATAGTGAAATCTCTA 58.412 37.037 0.00 0.00 39.36 2.43
512 701 5.965033 ATGTGGTCCATAGTGAAATCTCT 57.035 39.130 0.00 0.00 29.82 3.10
513 702 7.220030 ACATATGTGGTCCATAGTGAAATCTC 58.780 38.462 7.78 0.00 39.36 2.75
514 703 7.141758 ACATATGTGGTCCATAGTGAAATCT 57.858 36.000 7.78 0.00 39.36 2.40
515 704 8.939929 CATACATATGTGGTCCATAGTGAAATC 58.060 37.037 18.81 0.00 39.36 2.17
516 705 8.439971 ACATACATATGTGGTCCATAGTGAAAT 58.560 33.333 18.81 0.00 44.66 2.17
517 706 7.801104 ACATACATATGTGGTCCATAGTGAAA 58.199 34.615 18.81 0.00 44.66 2.69
518 707 7.373617 ACATACATATGTGGTCCATAGTGAA 57.626 36.000 18.81 0.00 44.66 3.18
519 708 6.994421 ACATACATATGTGGTCCATAGTGA 57.006 37.500 18.81 0.00 44.66 3.41
526 715 9.698309 GCATCTATATACATACATATGTGGTCC 57.302 37.037 18.81 0.00 45.77 4.46
558 747 9.247861 AGGAGCAAAATAAATGAATCTACACTT 57.752 29.630 0.00 0.00 0.00 3.16
559 748 8.814038 AGGAGCAAAATAAATGAATCTACACT 57.186 30.769 0.00 0.00 0.00 3.55
565 754 9.252962 CCACATAAGGAGCAAAATAAATGAATC 57.747 33.333 0.00 0.00 0.00 2.52
566 755 8.761689 ACCACATAAGGAGCAAAATAAATGAAT 58.238 29.630 0.00 0.00 0.00 2.57
567 756 8.133024 ACCACATAAGGAGCAAAATAAATGAA 57.867 30.769 0.00 0.00 0.00 2.57
568 757 7.147915 GGACCACATAAGGAGCAAAATAAATGA 60.148 37.037 0.00 0.00 0.00 2.57
569 758 6.980397 GGACCACATAAGGAGCAAAATAAATG 59.020 38.462 0.00 0.00 0.00 2.32
570 759 6.667414 TGGACCACATAAGGAGCAAAATAAAT 59.333 34.615 0.00 0.00 0.00 1.40
571 760 6.013379 TGGACCACATAAGGAGCAAAATAAA 58.987 36.000 0.00 0.00 0.00 1.40
572 761 5.575157 TGGACCACATAAGGAGCAAAATAA 58.425 37.500 0.00 0.00 0.00 1.40
573 762 5.186256 TGGACCACATAAGGAGCAAAATA 57.814 39.130 0.00 0.00 0.00 1.40
574 763 4.046286 TGGACCACATAAGGAGCAAAAT 57.954 40.909 0.00 0.00 0.00 1.82
575 764 3.517296 TGGACCACATAAGGAGCAAAA 57.483 42.857 0.00 0.00 0.00 2.44
576 765 3.737559 ATGGACCACATAAGGAGCAAA 57.262 42.857 0.00 0.00 38.26 3.68
577 766 3.780294 ACTATGGACCACATAAGGAGCAA 59.220 43.478 0.00 0.00 41.33 3.91
578 767 3.384168 ACTATGGACCACATAAGGAGCA 58.616 45.455 0.00 0.00 41.33 4.26
579 768 5.546621 TTACTATGGACCACATAAGGAGC 57.453 43.478 0.00 0.00 41.33 4.70
580 769 6.483640 GCTTTTACTATGGACCACATAAGGAG 59.516 42.308 0.00 0.47 41.33 3.69
581 770 6.157994 AGCTTTTACTATGGACCACATAAGGA 59.842 38.462 0.00 0.00 41.33 3.36
582 771 6.357367 AGCTTTTACTATGGACCACATAAGG 58.643 40.000 0.00 0.00 41.33 2.69
583 772 7.865706 AAGCTTTTACTATGGACCACATAAG 57.134 36.000 0.00 0.00 41.33 1.73
584 773 8.644374 AAAAGCTTTTACTATGGACCACATAA 57.356 30.769 22.70 0.00 41.33 1.90
585 774 7.885922 TGAAAAGCTTTTACTATGGACCACATA 59.114 33.333 23.90 0.00 41.03 2.29
586 775 6.719370 TGAAAAGCTTTTACTATGGACCACAT 59.281 34.615 23.90 0.00 43.68 3.21
587 776 6.065374 TGAAAAGCTTTTACTATGGACCACA 58.935 36.000 23.90 10.39 0.00 4.17
588 777 6.569179 TGAAAAGCTTTTACTATGGACCAC 57.431 37.500 23.90 7.98 0.00 4.16
589 778 7.504238 TCTTTGAAAAGCTTTTACTATGGACCA 59.496 33.333 23.90 11.56 35.99 4.02
590 779 7.808381 GTCTTTGAAAAGCTTTTACTATGGACC 59.192 37.037 23.90 9.15 35.99 4.46
591 780 8.568794 AGTCTTTGAAAAGCTTTTACTATGGAC 58.431 33.333 23.90 22.21 35.99 4.02
592 781 8.691661 AGTCTTTGAAAAGCTTTTACTATGGA 57.308 30.769 23.90 13.97 35.99 3.41
613 802 9.890915 ACTCCCTCTGATTCTAAATATAAGTCT 57.109 33.333 0.00 0.00 0.00 3.24
621 810 9.676129 TCCTAAATACTCCCTCTGATTCTAAAT 57.324 33.333 0.00 0.00 0.00 1.40
622 811 9.502035 TTCCTAAATACTCCCTCTGATTCTAAA 57.498 33.333 0.00 0.00 0.00 1.85
623 812 8.925338 GTTCCTAAATACTCCCTCTGATTCTAA 58.075 37.037 0.00 0.00 0.00 2.10
624 813 8.065627 TGTTCCTAAATACTCCCTCTGATTCTA 58.934 37.037 0.00 0.00 0.00 2.10
625 814 6.903534 TGTTCCTAAATACTCCCTCTGATTCT 59.096 38.462 0.00 0.00 0.00 2.40
626 815 7.125792 TGTTCCTAAATACTCCCTCTGATTC 57.874 40.000 0.00 0.00 0.00 2.52
627 816 7.698163 ATGTTCCTAAATACTCCCTCTGATT 57.302 36.000 0.00 0.00 0.00 2.57
628 817 7.456269 CCTATGTTCCTAAATACTCCCTCTGAT 59.544 40.741 0.00 0.00 0.00 2.90
629 818 6.782988 CCTATGTTCCTAAATACTCCCTCTGA 59.217 42.308 0.00 0.00 0.00 3.27
630 819 6.782988 TCCTATGTTCCTAAATACTCCCTCTG 59.217 42.308 0.00 0.00 0.00 3.35
631 820 6.935036 TCCTATGTTCCTAAATACTCCCTCT 58.065 40.000 0.00 0.00 0.00 3.69
632 821 7.290481 ACTTCCTATGTTCCTAAATACTCCCTC 59.710 40.741 0.00 0.00 0.00 4.30
633 822 7.140304 ACTTCCTATGTTCCTAAATACTCCCT 58.860 38.462 0.00 0.00 0.00 4.20
634 823 7.376335 ACTTCCTATGTTCCTAAATACTCCC 57.624 40.000 0.00 0.00 0.00 4.30
635 824 9.145442 ACTACTTCCTATGTTCCTAAATACTCC 57.855 37.037 0.00 0.00 0.00 3.85
636 825 9.968870 CACTACTTCCTATGTTCCTAAATACTC 57.031 37.037 0.00 0.00 0.00 2.59
637 826 9.710818 TCACTACTTCCTATGTTCCTAAATACT 57.289 33.333 0.00 0.00 0.00 2.12
638 827 9.747293 GTCACTACTTCCTATGTTCCTAAATAC 57.253 37.037 0.00 0.00 0.00 1.89
746 935 2.706890 ACGCCGGTGATAATCAAACTT 58.293 42.857 24.59 0.00 0.00 2.66
747 936 2.396590 ACGCCGGTGATAATCAAACT 57.603 45.000 24.59 0.00 0.00 2.66
753 942 4.331356 GCGTACGCCGGTGATAAT 57.669 55.556 29.51 0.59 36.94 1.28
795 984 5.473846 AGAAGAATTGGATAGATACGAGCGA 59.526 40.000 0.00 0.00 0.00 4.93
798 987 7.881142 AGTGAGAAGAATTGGATAGATACGAG 58.119 38.462 0.00 0.00 0.00 4.18
934 1429 1.635844 CCGCGTGTATATGTGTGTGT 58.364 50.000 4.92 0.00 0.00 3.72
935 1430 0.300491 GCCGCGTGTATATGTGTGTG 59.700 55.000 4.92 0.00 0.00 3.82
1358 1854 4.080356 CCATGTAGACAAGGATGGAAGGAA 60.080 45.833 0.00 0.00 38.10 3.36
1379 1876 0.455410 CCGAAACGGTATACGACCCA 59.545 55.000 1.80 0.00 46.81 4.51
1385 1882 3.784338 TGATTCACCCGAAACGGTATAC 58.216 45.455 9.28 0.00 46.80 1.47
1412 1919 3.389221 GCGTGAAAAACCATGAACCAAT 58.611 40.909 0.00 0.00 0.00 3.16
1499 2007 3.134458 CAGATCCGCTTACAATTCCTCC 58.866 50.000 0.00 0.00 0.00 4.30
1528 2036 4.749310 CAACGCTCTGGCTCGGCT 62.749 66.667 0.00 0.00 36.09 5.52
1586 2094 2.024176 CCACTTACGATTCCTGTGGG 57.976 55.000 0.00 0.00 43.01 4.61
1648 2156 3.689161 TCCAACATGAAATCGTCCATGAC 59.311 43.478 0.00 0.00 41.88 3.06
1649 2157 3.940852 CTCCAACATGAAATCGTCCATGA 59.059 43.478 0.00 0.00 41.88 3.07
1745 2253 8.738106 AGAAAATTCATCCTGAGAAACTCATTC 58.262 33.333 1.92 1.18 39.92 2.67
1752 2260 7.578189 GCATGGAAGAAAATTCATCCTGAGAAA 60.578 37.037 15.97 0.00 43.56 2.52
1774 2291 2.158058 CGTCCAAAATTTTGCAGGCATG 59.842 45.455 22.90 9.50 36.86 4.06
1846 2369 5.970619 CCAATAGGAGCTGCTAAGGTACTTG 60.971 48.000 19.55 16.18 42.75 3.16
1879 2402 2.983402 CTTCATGAGCACACAACCAG 57.017 50.000 0.00 0.00 0.00 4.00
2079 2603 1.550524 CGGATGGAGTCTTTGTCAGGA 59.449 52.381 0.00 0.00 0.00 3.86
2433 2959 6.263842 ACATTCATTGTCACTGATTCACACTT 59.736 34.615 0.00 0.00 30.89 3.16
2485 3011 4.079844 TGGTGAGGAGGCATCAATATTGAA 60.080 41.667 21.50 6.19 41.13 2.69
2518 3044 2.186076 CACCATACGAGAGAACGAAGC 58.814 52.381 0.00 0.00 37.03 3.86
2588 3114 6.884295 CCAAATTAGAATGACTACCCAGACAA 59.116 38.462 0.00 0.00 30.29 3.18
2595 3121 6.884836 ACAGGAACCAAATTAGAATGACTACC 59.115 38.462 0.00 0.00 0.00 3.18
2668 3194 7.987458 TGGATACTTTACTCCATGTGAAAGATC 59.013 37.037 10.90 0.00 36.63 2.75
2831 3357 9.708222 CTTGTTATTTTTATCTTGTCTCGATGG 57.292 33.333 0.00 0.00 0.00 3.51
2857 3383 7.900782 TTGAACTAGACCTATTGTTAAGTGC 57.099 36.000 0.00 0.00 0.00 4.40
2909 3435 7.467623 CCATTATCTTCAACAGCTAAGTGAAC 58.532 38.462 2.62 0.00 0.00 3.18
3001 3527 8.089597 ACATTGCAACATTATGAATGAAAGACA 58.910 29.630 0.00 0.00 41.46 3.41
3171 3697 3.898482 AGCTTATGGTGTGGGATAAACC 58.102 45.455 0.00 0.00 38.08 3.27
3172 3698 5.681639 ACTAGCTTATGGTGTGGGATAAAC 58.318 41.667 0.00 0.00 0.00 2.01
3173 3699 5.968676 ACTAGCTTATGGTGTGGGATAAA 57.031 39.130 0.00 0.00 0.00 1.40
3174 3700 5.968676 AACTAGCTTATGGTGTGGGATAA 57.031 39.130 0.00 0.00 0.00 1.75
3175 3701 5.968676 AAACTAGCTTATGGTGTGGGATA 57.031 39.130 0.00 0.00 0.00 2.59
3176 3702 4.862641 AAACTAGCTTATGGTGTGGGAT 57.137 40.909 0.00 0.00 0.00 3.85
3177 3703 4.650972 AAAACTAGCTTATGGTGTGGGA 57.349 40.909 0.00 0.00 0.00 4.37
3178 3704 5.741011 TCTAAAACTAGCTTATGGTGTGGG 58.259 41.667 0.00 0.00 0.00 4.61
3228 3759 6.712241 TTCGAATGAGCTTTCTTCTTAGTG 57.288 37.500 0.00 0.00 0.00 2.74
3408 3971 4.092675 CAGAAATTCGGAGAAGAGAACAGC 59.907 45.833 0.00 0.00 45.90 4.40
3486 4049 7.081976 CCTATGTTCGTGTAAAAAGGGAAAAG 58.918 38.462 0.00 0.00 0.00 2.27
3552 4115 4.730657 GACTACGTGTCAAAGCTAGCTTA 58.269 43.478 29.52 13.15 44.73 3.09
3594 4157 8.135382 AGAACTAGCCGACAATATATAACCAT 57.865 34.615 0.00 0.00 0.00 3.55
3621 4184 7.381948 CAGTAGCAAACACAATATTGAAAAGCA 59.618 33.333 22.16 7.31 0.00 3.91
3781 4344 1.285667 TCATGGTTCTGGCACATGGAT 59.714 47.619 13.76 0.00 41.64 3.41
3783 4346 0.813184 GTCATGGTTCTGGCACATGG 59.187 55.000 13.76 0.00 41.64 3.66
3840 4582 2.686405 GGCCTAAAATAACAAGTCGGGG 59.314 50.000 0.00 0.00 0.00 5.73
3844 4586 8.601845 AACAAATTGGCCTAAAATAACAAGTC 57.398 30.769 3.32 0.00 0.00 3.01
3876 4618 3.258123 ACCAAATTGTTCGCCAGCTTATT 59.742 39.130 0.00 0.00 0.00 1.40
4042 4784 3.554692 GTTGCGTCGATGCCTCCG 61.555 66.667 26.06 6.83 0.00 4.63
4289 5031 4.423732 CTCGGTAAAAGGCATCATTTTGG 58.576 43.478 0.23 0.00 32.38 3.28
4304 5046 1.076024 ACTACACCTGACCCTCGGTAA 59.924 52.381 0.00 0.00 35.25 2.85
4314 5056 2.696526 AAGAGGGACACTACACCTGA 57.303 50.000 0.00 0.00 34.02 3.86
4324 5066 9.710818 ACTACTGTTAGATTTATAAGAGGGACA 57.289 33.333 0.00 0.00 31.93 4.02
4444 5281 2.147958 GTTATTCGCAGTGGGTTGACA 58.852 47.619 7.12 0.00 0.00 3.58
4453 5290 4.156556 ACATTGCTTGATGTTATTCGCAGT 59.843 37.500 0.00 0.00 36.92 4.40
4472 5309 5.441718 TTCTGAGAAGGCATAGGAACATT 57.558 39.130 0.00 0.00 0.00 2.71
4477 5314 4.302067 AGGAATTCTGAGAAGGCATAGGA 58.698 43.478 5.23 0.00 0.00 2.94
4820 5657 0.255890 GGAGTTGAGCTGGCCCATAA 59.744 55.000 0.00 0.00 0.00 1.90
4942 5779 7.337942 CAGAAACCCCATTCATAATATAGAGGC 59.662 40.741 0.00 0.00 0.00 4.70
5260 6097 9.027129 CATTATATCATCCAACAAAGCAAGTTG 57.973 33.333 0.00 0.00 44.47 3.16
5404 6357 6.381133 TCTCCAAGTCTTAGATTGCACAGATA 59.619 38.462 0.00 0.00 0.00 1.98
5878 6831 3.678289 TCATGCAACTGATAACAGCACT 58.322 40.909 0.00 0.00 46.95 4.40
6066 7024 6.434340 TCTGCTACATGACAAGTCCGATATAT 59.566 38.462 0.00 0.00 0.00 0.86
6158 7280 2.501723 CCACTACCAGGACAATAGCAGT 59.498 50.000 0.00 0.00 0.00 4.40
6240 7362 9.407380 ACAAATGAAGCCAGTTATTATCATGTA 57.593 29.630 0.00 0.00 0.00 2.29
6241 7363 8.192774 CACAAATGAAGCCAGTTATTATCATGT 58.807 33.333 0.00 0.00 0.00 3.21
6583 7705 4.577693 ACAGCTTGTTGCCATCTGTATATG 59.422 41.667 0.00 0.00 44.23 1.78
6637 7759 7.984391 TCATGGTGTATGCACAATTTAGTAAG 58.016 34.615 16.11 0.00 46.95 2.34
6752 7874 2.953020 AGACAAGCGAACTGATCAGAC 58.047 47.619 29.27 19.33 0.00 3.51
6773 7895 4.603131 AGGTGCACAGATTATTGGTCAAT 58.397 39.130 20.43 1.65 34.93 2.57
6997 8119 2.308570 TCAGGTATTCTGGTGGCACATT 59.691 45.455 20.82 1.24 43.53 2.71
7050 8172 2.245096 CAAACTGAGCGCTTGTAATGC 58.755 47.619 13.26 0.00 0.00 3.56
7103 8225 1.887242 TGTCTGTGCACTGGCGAAC 60.887 57.895 21.25 13.47 45.35 3.95
7111 8233 1.331756 CAAGAGGTTGTGTCTGTGCAC 59.668 52.381 10.75 10.75 39.65 4.57
7118 8240 3.428045 GCATATTGGCAAGAGGTTGTGTC 60.428 47.826 8.38 0.00 35.92 3.67
7237 8360 3.686016 ACAAGAAGAAACAGGTGTGTGT 58.314 40.909 0.00 0.00 36.84 3.72
7322 8498 4.361971 TCGTCGGGAGGAGCAGGT 62.362 66.667 0.00 0.00 0.00 4.00
7360 8549 2.234168 GGAGAGGAGTCAGGGTAAACAC 59.766 54.545 0.00 0.00 0.00 3.32
7361 8550 2.537143 GGAGAGGAGTCAGGGTAAACA 58.463 52.381 0.00 0.00 0.00 2.83
7362 8551 1.832366 GGGAGAGGAGTCAGGGTAAAC 59.168 57.143 0.00 0.00 0.00 2.01
7363 8552 1.273666 GGGGAGAGGAGTCAGGGTAAA 60.274 57.143 0.00 0.00 0.00 2.01
7364 8553 0.338814 GGGGAGAGGAGTCAGGGTAA 59.661 60.000 0.00 0.00 0.00 2.85
7365 8554 1.934459 CGGGGAGAGGAGTCAGGGTA 61.934 65.000 0.00 0.00 0.00 3.69
7366 8555 2.781406 GGGGAGAGGAGTCAGGGT 59.219 66.667 0.00 0.00 0.00 4.34
7367 8556 2.443016 CGGGGAGAGGAGTCAGGG 60.443 72.222 0.00 0.00 0.00 4.45
7368 8557 3.151022 GCGGGGAGAGGAGTCAGG 61.151 72.222 0.00 0.00 0.00 3.86
7369 8558 3.151022 GGCGGGGAGAGGAGTCAG 61.151 72.222 0.00 0.00 0.00 3.51
7370 8559 4.779733 GGGCGGGGAGAGGAGTCA 62.780 72.222 0.00 0.00 0.00 3.41
7402 8591 2.043526 ACGGTCTCCCCTCTAGGTTTTA 59.956 50.000 0.00 0.00 0.00 1.52
7419 8608 1.338769 GGTCTTGCAGTTATCCACGGT 60.339 52.381 0.00 0.00 0.00 4.83
7421 8610 2.271800 GAGGTCTTGCAGTTATCCACG 58.728 52.381 0.00 0.00 0.00 4.94
7452 8641 1.754380 TATGGGATCACGGCGAAGGG 61.754 60.000 16.62 0.00 0.00 3.95
7457 8646 3.036084 GCGTATGGGATCACGGCG 61.036 66.667 4.80 4.80 38.57 6.46
7524 8713 0.322546 TGTCGCTGGCTCTCTCTGTA 60.323 55.000 0.00 0.00 0.00 2.74
7533 8722 2.037136 GCTGTCATTGTCGCTGGCT 61.037 57.895 0.00 0.00 0.00 4.75
7534 8723 2.482374 GCTGTCATTGTCGCTGGC 59.518 61.111 0.00 0.00 0.00 4.85
7535 8724 1.642037 CTGGCTGTCATTGTCGCTGG 61.642 60.000 0.00 0.00 0.00 4.85
7536 8725 1.792301 CTGGCTGTCATTGTCGCTG 59.208 57.895 0.00 0.00 0.00 5.18
7537 8726 2.037136 GCTGGCTGTCATTGTCGCT 61.037 57.895 0.00 0.00 0.00 4.93
7538 8727 2.482374 GCTGGCTGTCATTGTCGC 59.518 61.111 0.00 0.00 0.00 5.19
7539 8728 1.086067 ATCGCTGGCTGTCATTGTCG 61.086 55.000 0.00 0.00 0.00 4.35
7540 8729 0.376152 CATCGCTGGCTGTCATTGTC 59.624 55.000 0.00 0.00 0.00 3.18
7541 8730 0.036105 TCATCGCTGGCTGTCATTGT 60.036 50.000 0.00 0.00 0.00 2.71
7542 8731 0.656259 CTCATCGCTGGCTGTCATTG 59.344 55.000 0.00 0.00 0.00 2.82
7543 8732 0.463295 CCTCATCGCTGGCTGTCATT 60.463 55.000 0.00 0.00 0.00 2.57
7544 8733 1.145598 CCTCATCGCTGGCTGTCAT 59.854 57.895 0.00 0.00 0.00 3.06
7545 8734 1.830587 AACCTCATCGCTGGCTGTCA 61.831 55.000 0.00 0.00 0.00 3.58
7546 8735 0.175760 TAACCTCATCGCTGGCTGTC 59.824 55.000 0.00 0.00 0.00 3.51
7547 8736 0.613260 TTAACCTCATCGCTGGCTGT 59.387 50.000 0.00 0.00 0.00 4.40
7548 8737 1.009829 GTTAACCTCATCGCTGGCTG 58.990 55.000 0.00 0.00 0.00 4.85
7558 8747 3.364460 CATGGACCCATGTTAACCTCA 57.636 47.619 18.43 0.00 46.20 3.86
7576 8781 2.158415 CCTAATTGCATCCAGGGACCAT 60.158 50.000 0.00 0.00 0.00 3.55
7606 8811 1.098712 CGCTCCTCTTCTACCTCGCT 61.099 60.000 0.00 0.00 0.00 4.93
7628 8833 1.497278 CAACACCATCGTTGCCTCG 59.503 57.895 0.00 0.00 39.82 4.63
7713 8918 1.005037 CACTGCTTGCCGACACCTA 60.005 57.895 0.00 0.00 0.00 3.08
7778 8983 0.729690 GAGCATCGCCTTTTCTGGAC 59.270 55.000 0.00 0.00 0.00 4.02
7848 9053 5.332106 TTCCTCTCCATCTAGCATCTAGT 57.668 43.478 1.34 0.00 0.00 2.57
7911 9117 1.607178 CATTTGGACAGGCCCTGCA 60.607 57.895 11.63 0.00 34.37 4.41
7912 9118 0.899717 TTCATTTGGACAGGCCCTGC 60.900 55.000 11.63 3.45 34.37 4.85
7937 9143 4.189231 TCAACTGCTGTGATGATGATGAG 58.811 43.478 0.00 0.00 0.00 2.90
7977 9186 3.555518 GCCAAACTCGAATCAGACAAAC 58.444 45.455 0.00 0.00 0.00 2.93
8004 9213 0.036010 ACGGAGCTGGAAATGTCAGG 60.036 55.000 0.00 0.00 33.16 3.86
8152 9487 6.641169 TTTATTGCCAATATGCCATAACGA 57.359 33.333 0.00 0.00 31.03 3.85
8216 9551 4.768130 TTGCCATTGAAAATTGCCATTG 57.232 36.364 0.00 0.00 0.00 2.82
8217 9552 5.477291 TGAATTGCCATTGAAAATTGCCATT 59.523 32.000 0.00 0.00 0.00 3.16
8218 9553 5.010933 TGAATTGCCATTGAAAATTGCCAT 58.989 33.333 0.00 0.00 0.00 4.40
8219 9554 4.395625 TGAATTGCCATTGAAAATTGCCA 58.604 34.783 0.00 0.00 0.00 4.92
8220 9555 4.673320 GCTGAATTGCCATTGAAAATTGCC 60.673 41.667 0.00 0.00 0.00 4.52
8221 9556 4.083217 TGCTGAATTGCCATTGAAAATTGC 60.083 37.500 0.00 0.00 0.00 3.56
8222 9557 5.614923 TGCTGAATTGCCATTGAAAATTG 57.385 34.783 0.00 0.00 0.00 2.32
8223 9558 5.335348 GCTTGCTGAATTGCCATTGAAAATT 60.335 36.000 0.00 0.00 0.00 1.82
8224 9559 4.155280 GCTTGCTGAATTGCCATTGAAAAT 59.845 37.500 0.00 0.00 0.00 1.82
8225 9560 3.499157 GCTTGCTGAATTGCCATTGAAAA 59.501 39.130 0.00 0.00 0.00 2.29
8226 9561 3.068560 GCTTGCTGAATTGCCATTGAAA 58.931 40.909 0.00 0.00 0.00 2.69
8227 9562 2.613474 GGCTTGCTGAATTGCCATTGAA 60.613 45.455 0.00 0.00 44.34 2.69
8228 9563 1.066716 GGCTTGCTGAATTGCCATTGA 60.067 47.619 0.00 0.00 44.34 2.57
8294 9629 6.659242 TCCTTCCTCCACAAAAGACATTAATC 59.341 38.462 0.00 0.00 0.00 1.75
8303 9638 2.808543 CGTCTTCCTTCCTCCACAAAAG 59.191 50.000 0.00 0.00 0.00 2.27
8314 9649 4.633126 GGTATTTAACCCACGTCTTCCTTC 59.367 45.833 0.00 0.00 43.16 3.46
8402 9737 9.941664 GTATGTTTTATGTGGAAGATGATTGAG 57.058 33.333 0.00 0.00 0.00 3.02
8450 9788 6.405397 GCTCAGTACCTTGAGGAAAACAAAAA 60.405 38.462 12.58 0.00 43.80 1.94
8505 9843 3.553917 CGATTGTGCCGACATAATACACA 59.446 43.478 0.00 0.00 37.69 3.72
8713 10051 7.330262 CCACCACATTATCCTTTTTGCTAAAT 58.670 34.615 0.00 0.00 0.00 1.40
8720 10058 3.769300 GGAGCCACCACATTATCCTTTTT 59.231 43.478 0.00 0.00 38.79 1.94
8826 10166 2.717639 ACATACAGCTTAGGGCCAAG 57.282 50.000 6.18 8.82 43.05 3.61
8894 10234 0.815615 GAGCCAATAGGAAGGTGCGG 60.816 60.000 0.00 0.00 36.89 5.69
9119 10490 5.232202 CGCTATAGCACCATTTATATGACCG 59.768 44.000 23.99 0.00 42.21 4.79
9151 10522 2.438434 GACCGGAGCACCCATTGG 60.438 66.667 9.46 0.00 37.80 3.16
9153 10524 4.096003 CGGACCGGAGCACCCATT 62.096 66.667 9.46 0.00 34.14 3.16
9182 10553 4.866921 TGCATATCAATCAATCAGCAAGC 58.133 39.130 0.00 0.00 0.00 4.01
9357 10745 4.202050 CCCTTTTCCTGCATAGCATTGTAC 60.202 45.833 0.00 0.00 38.13 2.90
9360 10748 2.762327 ACCCTTTTCCTGCATAGCATTG 59.238 45.455 0.00 0.00 38.13 2.82
9361 10749 3.026694 GACCCTTTTCCTGCATAGCATT 58.973 45.455 0.00 0.00 38.13 3.56
9362 10750 2.025037 TGACCCTTTTCCTGCATAGCAT 60.025 45.455 0.00 0.00 38.13 3.79
9484 10872 2.479566 TGCAAAGTCAGAGGATCCAC 57.520 50.000 15.82 8.01 33.66 4.02
9485 10873 3.614092 GATTGCAAAGTCAGAGGATCCA 58.386 45.455 15.82 0.00 33.66 3.41
9486 10874 2.948315 GGATTGCAAAGTCAGAGGATCC 59.052 50.000 1.71 2.48 33.66 3.36
9487 10875 2.948315 GGGATTGCAAAGTCAGAGGATC 59.052 50.000 1.71 0.00 0.00 3.36
9488 10876 2.579860 AGGGATTGCAAAGTCAGAGGAT 59.420 45.455 1.71 0.00 0.00 3.24
9489 10877 1.988107 AGGGATTGCAAAGTCAGAGGA 59.012 47.619 1.71 0.00 0.00 3.71
9490 10878 2.089980 CAGGGATTGCAAAGTCAGAGG 58.910 52.381 1.71 0.00 0.00 3.69
9502 10890 0.825010 GCAGGGTATGGCAGGGATTG 60.825 60.000 0.00 0.00 0.00 2.67
9503 10891 1.538666 GCAGGGTATGGCAGGGATT 59.461 57.895 0.00 0.00 0.00 3.01
9504 10892 3.255032 GCAGGGTATGGCAGGGAT 58.745 61.111 0.00 0.00 0.00 3.85
9511 10899 1.281867 TGACTCAAAGGCAGGGTATGG 59.718 52.381 0.00 0.00 0.00 2.74
9512 10900 2.026822 AGTGACTCAAAGGCAGGGTATG 60.027 50.000 0.00 0.00 30.96 2.39
9513 10901 2.026822 CAGTGACTCAAAGGCAGGGTAT 60.027 50.000 0.00 0.00 30.96 2.73
9514 10902 1.347707 CAGTGACTCAAAGGCAGGGTA 59.652 52.381 0.00 0.00 30.96 3.69
9515 10903 0.109342 CAGTGACTCAAAGGCAGGGT 59.891 55.000 0.00 0.00 30.96 4.34
9516 10904 0.397941 TCAGTGACTCAAAGGCAGGG 59.602 55.000 0.00 0.00 30.96 4.45
9517 10905 1.202687 TGTCAGTGACTCAAAGGCAGG 60.203 52.381 23.29 0.00 30.96 4.85
9518 10906 2.141517 CTGTCAGTGACTCAAAGGCAG 58.858 52.381 23.29 6.76 30.96 4.85
9519 10907 1.202687 CCTGTCAGTGACTCAAAGGCA 60.203 52.381 23.29 0.38 33.15 4.75
9520 10908 1.202698 ACCTGTCAGTGACTCAAAGGC 60.203 52.381 23.29 0.00 33.15 4.35
9521 10909 2.487934 CACCTGTCAGTGACTCAAAGG 58.512 52.381 23.29 21.72 40.34 3.11
9522 10910 2.487934 CCACCTGTCAGTGACTCAAAG 58.512 52.381 23.29 12.34 40.34 2.77
9523 10911 1.140852 CCCACCTGTCAGTGACTCAAA 59.859 52.381 23.29 2.89 40.34 2.69
9524 10912 0.758734 CCCACCTGTCAGTGACTCAA 59.241 55.000 23.29 3.26 40.34 3.02
9525 10913 1.758440 GCCCACCTGTCAGTGACTCA 61.758 60.000 23.29 4.07 40.34 3.41
9526 10914 1.004440 GCCCACCTGTCAGTGACTC 60.004 63.158 23.29 0.00 40.34 3.36
9527 10915 2.520536 GGCCCACCTGTCAGTGACT 61.521 63.158 23.29 1.01 40.34 3.41
9528 10916 2.032681 GGCCCACCTGTCAGTGAC 59.967 66.667 16.68 16.68 40.34 3.67
9529 10917 3.249189 GGGCCCACCTGTCAGTGA 61.249 66.667 19.95 0.00 40.34 3.41
9530 10918 4.351054 GGGGCCCACCTGTCAGTG 62.351 72.222 26.86 0.00 40.03 3.66
9531 10919 2.781258 TATGGGGCCCACCTGTCAGT 62.781 60.000 31.54 12.42 35.80 3.41
9532 10920 2.000701 TATGGGGCCCACCTGTCAG 61.001 63.158 31.54 0.00 35.80 3.51
9533 10921 2.126142 TATGGGGCCCACCTGTCA 59.874 61.111 31.54 11.89 35.80 3.58
9534 10922 1.571773 AAGTATGGGGCCCACCTGTC 61.572 60.000 31.54 16.09 35.80 3.51
9535 10923 1.146544 AAAGTATGGGGCCCACCTGT 61.147 55.000 31.54 19.29 35.80 4.00
9536 10924 0.684153 CAAAGTATGGGGCCCACCTG 60.684 60.000 31.54 16.53 35.80 4.00
9537 10925 1.146544 ACAAAGTATGGGGCCCACCT 61.147 55.000 31.54 23.92 35.80 4.00
9538 10926 0.970427 CACAAAGTATGGGGCCCACC 60.970 60.000 31.54 21.84 35.80 4.61
9539 10927 2.578683 CACAAAGTATGGGGCCCAC 58.421 57.895 31.54 17.27 35.80 4.61
9546 10934 0.326927 ACGGGTCCCACAAAGTATGG 59.673 55.000 9.12 0.00 36.94 2.74
9547 10935 1.271163 ACACGGGTCCCACAAAGTATG 60.271 52.381 9.12 0.00 0.00 2.39
9548 10936 1.061546 ACACGGGTCCCACAAAGTAT 58.938 50.000 9.12 0.00 0.00 2.12
9549 10937 0.107081 CACACGGGTCCCACAAAGTA 59.893 55.000 9.12 0.00 0.00 2.24
9550 10938 1.153046 CACACGGGTCCCACAAAGT 60.153 57.895 9.12 0.00 0.00 2.66
9551 10939 1.153046 ACACACGGGTCCCACAAAG 60.153 57.895 9.12 0.00 0.00 2.77
9552 10940 1.153127 GACACACGGGTCCCACAAA 60.153 57.895 9.12 0.00 0.00 2.83
9553 10941 2.318519 CTGACACACGGGTCCCACAA 62.319 60.000 9.12 0.00 36.97 3.33
9554 10942 2.764547 TGACACACGGGTCCCACA 60.765 61.111 9.12 0.00 36.97 4.17
9555 10943 2.030562 CTGACACACGGGTCCCAC 59.969 66.667 9.12 0.00 36.97 4.61
9556 10944 2.445085 ACTGACACACGGGTCCCA 60.445 61.111 9.12 0.00 36.97 4.37
9557 10945 2.030562 CACTGACACACGGGTCCC 59.969 66.667 0.00 0.00 36.97 4.46
9558 10946 1.300697 GTCACTGACACACGGGTCC 60.301 63.158 4.17 0.00 36.97 4.46
9559 10947 0.318784 GAGTCACTGACACACGGGTC 60.319 60.000 11.80 0.00 38.29 4.46
9560 10948 1.040893 TGAGTCACTGACACACGGGT 61.041 55.000 11.80 0.00 34.60 5.28
9561 10949 0.104120 TTGAGTCACTGACACACGGG 59.896 55.000 11.80 0.00 33.37 5.28
9562 10950 1.860950 CTTTGAGTCACTGACACACGG 59.139 52.381 11.80 3.46 33.37 4.94
9563 10951 1.860950 CCTTTGAGTCACTGACACACG 59.139 52.381 11.80 5.33 33.37 4.49
9564 10952 2.906354 ACCTTTGAGTCACTGACACAC 58.094 47.619 11.80 3.56 33.37 3.82
9565 10953 3.069586 CCTACCTTTGAGTCACTGACACA 59.930 47.826 11.80 8.49 34.60 3.72
9566 10954 3.654414 CCTACCTTTGAGTCACTGACAC 58.346 50.000 11.80 5.84 34.60 3.67
9567 10955 2.037251 GCCTACCTTTGAGTCACTGACA 59.963 50.000 11.80 0.00 34.60 3.58
9568 10956 2.300437 AGCCTACCTTTGAGTCACTGAC 59.700 50.000 0.38 0.38 0.00 3.51
9569 10957 2.609747 AGCCTACCTTTGAGTCACTGA 58.390 47.619 0.00 0.00 0.00 3.41
9570 10958 3.070018 CAAGCCTACCTTTGAGTCACTG 58.930 50.000 0.00 0.00 0.00 3.66
9571 10959 2.039084 CCAAGCCTACCTTTGAGTCACT 59.961 50.000 0.00 0.00 0.00 3.41
9572 10960 2.427506 CCAAGCCTACCTTTGAGTCAC 58.572 52.381 0.00 0.00 0.00 3.67
9573 10961 1.271379 GCCAAGCCTACCTTTGAGTCA 60.271 52.381 0.00 0.00 0.00 3.41
9574 10962 1.454201 GCCAAGCCTACCTTTGAGTC 58.546 55.000 0.00 0.00 0.00 3.36
9575 10963 0.038310 GGCCAAGCCTACCTTTGAGT 59.962 55.000 0.00 0.00 46.69 3.41
9576 10964 2.873797 GGCCAAGCCTACCTTTGAG 58.126 57.895 0.00 0.00 46.69 3.02
9593 10981 3.866582 GAGGATCCCCTGCCGTGG 61.867 72.222 8.55 0.00 44.53 4.94
9594 10982 4.227134 CGAGGATCCCCTGCCGTG 62.227 72.222 8.55 0.00 44.53 4.94
9595 10983 4.779733 ACGAGGATCCCCTGCCGT 62.780 66.667 8.55 7.95 44.53 5.68
9596 10984 3.917760 GACGAGGATCCCCTGCCG 61.918 72.222 8.55 7.30 44.53 5.69
9597 10985 3.551407 GGACGAGGATCCCCTGCC 61.551 72.222 8.55 1.52 44.53 4.85
9598 10986 3.917760 CGGACGAGGATCCCCTGC 61.918 72.222 8.55 0.00 44.53 4.85
9599 10987 2.017559 GAACGGACGAGGATCCCCTG 62.018 65.000 8.55 0.45 44.53 4.45
9601 10989 1.757340 AGAACGGACGAGGATCCCC 60.757 63.158 8.55 0.79 35.03 4.81
9602 10990 1.437986 CAGAACGGACGAGGATCCC 59.562 63.158 8.55 0.00 35.03 3.85
9603 10991 1.321074 ACCAGAACGGACGAGGATCC 61.321 60.000 2.48 2.48 38.63 3.36
9604 10992 0.179134 CACCAGAACGGACGAGGATC 60.179 60.000 0.00 0.00 38.63 3.36
9605 10993 1.890894 CACCAGAACGGACGAGGAT 59.109 57.895 0.00 0.00 38.63 3.24
9606 10994 2.927580 GCACCAGAACGGACGAGGA 61.928 63.158 0.00 0.00 38.63 3.71
9607 10995 2.432628 GCACCAGAACGGACGAGG 60.433 66.667 0.00 0.00 38.63 4.63
9608 10996 2.805353 CGCACCAGAACGGACGAG 60.805 66.667 0.00 0.00 39.31 4.18
9609 10997 3.289062 TCGCACCAGAACGGACGA 61.289 61.111 0.00 0.00 42.08 4.20
9610 10998 3.103911 GTCGCACCAGAACGGACG 61.104 66.667 0.00 0.00 38.63 4.79
9611 10999 1.352156 GATGTCGCACCAGAACGGAC 61.352 60.000 0.00 0.00 38.63 4.79
9612 11000 1.080093 GATGTCGCACCAGAACGGA 60.080 57.895 0.00 0.00 38.63 4.69
9613 11001 1.374125 TGATGTCGCACCAGAACGG 60.374 57.895 0.00 0.00 42.50 4.44
9626 11014 4.819761 ATGCGCCGCTCGTGATGT 62.820 61.111 11.67 0.00 41.07 3.06
9654 11042 3.692257 AGGGGAGATGAAGCATTATCG 57.308 47.619 0.00 0.00 0.00 2.92
9656 11044 4.418190 AGGAAAGGGGAGATGAAGCATTAT 59.582 41.667 0.00 0.00 0.00 1.28
9657 11045 3.788142 AGGAAAGGGGAGATGAAGCATTA 59.212 43.478 0.00 0.00 0.00 1.90
9658 11046 2.584498 AGGAAAGGGGAGATGAAGCATT 59.416 45.455 0.00 0.00 0.00 3.56
9659 11047 2.212420 AGGAAAGGGGAGATGAAGCAT 58.788 47.619 0.00 0.00 0.00 3.79
9660 11048 1.673767 AGGAAAGGGGAGATGAAGCA 58.326 50.000 0.00 0.00 0.00 3.91
9661 11049 4.564613 GCTATAGGAAAGGGGAGATGAAGC 60.565 50.000 1.04 0.00 0.00 3.86
9662 11050 4.594920 TGCTATAGGAAAGGGGAGATGAAG 59.405 45.833 1.04 0.00 0.00 3.02
9663 11051 4.348168 GTGCTATAGGAAAGGGGAGATGAA 59.652 45.833 1.04 0.00 0.00 2.57
9664 11052 3.904339 GTGCTATAGGAAAGGGGAGATGA 59.096 47.826 1.04 0.00 0.00 2.92
9665 11053 3.648067 TGTGCTATAGGAAAGGGGAGATG 59.352 47.826 1.04 0.00 0.00 2.90
9819 11314 0.390340 TGCGCTCTGTCTTCCATGTC 60.390 55.000 9.73 0.00 0.00 3.06
9858 11353 1.738099 CAGTAGCGCGACCAAAGCT 60.738 57.895 17.44 0.00 44.24 3.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.