Multiple sequence alignment - TraesCS6B01G266800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G266800 chr6B 100.000 5908 0 0 1 5908 479839606 479845513 0.000000e+00 10911.0
1 TraesCS6B01G266800 chr6B 95.393 521 24 0 1 521 479835766 479835246 0.000000e+00 830.0
2 TraesCS6B01G266800 chr6B 89.464 522 42 7 1 522 667889016 667888508 0.000000e+00 647.0
3 TraesCS6B01G266800 chr6B 92.388 289 17 3 521 809 483624823 483625106 1.980000e-109 407.0
4 TraesCS6B01G266800 chr6B 96.063 127 5 0 3871 3997 209249740 209249866 2.160000e-49 207.0
5 TraesCS6B01G266800 chr6B 92.086 139 10 1 3856 3993 39758542 39758404 1.680000e-45 195.0
6 TraesCS6B01G266800 chr6A 92.293 3231 130 60 734 3868 480698820 480695613 0.000000e+00 4477.0
7 TraesCS6B01G266800 chr6A 93.811 1018 43 9 4618 5632 480695122 480694122 0.000000e+00 1513.0
8 TraesCS6B01G266800 chr6A 94.747 495 19 4 3994 4481 480695605 480695111 0.000000e+00 763.0
9 TraesCS6B01G266800 chr6A 90.179 112 6 3 519 630 480699273 480699167 2.220000e-29 141.0
10 TraesCS6B01G266800 chr6A 91.379 58 5 0 1718 1775 243958287 243958344 4.910000e-11 80.5
11 TraesCS6B01G266800 chr6D 92.086 2780 101 47 661 3342 340950537 340947779 0.000000e+00 3805.0
12 TraesCS6B01G266800 chr6D 91.733 1004 47 14 4618 5608 340946742 340945762 0.000000e+00 1362.0
13 TraesCS6B01G266800 chr6D 95.644 505 15 4 3984 4481 340947235 340946731 0.000000e+00 804.0
14 TraesCS6B01G266800 chr6D 94.251 487 20 2 3389 3875 340947780 340947302 0.000000e+00 737.0
15 TraesCS6B01G266800 chr6D 94.834 271 11 1 5638 5908 465775676 465775409 2.550000e-113 420.0
16 TraesCS6B01G266800 chr6D 92.727 110 7 1 521 630 340950648 340950540 2.200000e-34 158.0
17 TraesCS6B01G266800 chr1B 94.818 521 27 0 1 521 677259737 677259217 0.000000e+00 813.0
18 TraesCS6B01G266800 chr1B 93.474 521 25 4 1 521 616091516 616092027 0.000000e+00 765.0
19 TraesCS6B01G266800 chr1B 98.658 149 2 0 4478 4626 144229237 144229385 1.260000e-66 265.0
20 TraesCS6B01G266800 chr1B 98.658 149 2 0 4478 4626 646926563 646926711 1.260000e-66 265.0
21 TraesCS6B01G266800 chr1B 91.781 146 11 1 3858 4003 377105638 377105782 1.000000e-47 202.0
22 TraesCS6B01G266800 chr7B 93.858 521 32 0 1 521 333395585 333396105 0.000000e+00 785.0
23 TraesCS6B01G266800 chr7B 92.701 274 16 2 5636 5908 603249373 603249643 5.550000e-105 392.0
24 TraesCS6B01G266800 chr7B 96.774 124 4 0 3871 3994 450629617 450629740 2.160000e-49 207.0
25 TraesCS6B01G266800 chr7B 94.545 55 3 0 1718 1772 531614383 531614329 1.050000e-12 86.1
26 TraesCS6B01G266800 chr2A 91.985 524 34 3 1 521 21935170 21935688 0.000000e+00 728.0
27 TraesCS6B01G266800 chr2A 98.658 149 1 1 4478 4626 691479492 691479345 4.540000e-66 263.0
28 TraesCS6B01G266800 chr5D 87.238 525 45 11 1 520 123494645 123495152 3.970000e-161 579.0
29 TraesCS6B01G266800 chr5D 93.525 278 14 1 5631 5908 483615037 483615310 1.530000e-110 411.0
30 TraesCS6B01G266800 chr5D 92.727 55 4 0 1718 1772 175300060 175300006 4.910000e-11 80.5
31 TraesCS6B01G266800 chr4B 86.015 522 41 15 1 522 513061322 513060833 1.130000e-146 531.0
32 TraesCS6B01G266800 chr4B 96.815 157 5 0 4478 4634 78609290 78609134 4.540000e-66 263.0
33 TraesCS6B01G266800 chr2D 85.255 529 53 12 1 521 47510597 47510086 6.780000e-144 521.0
34 TraesCS6B01G266800 chr2D 96.324 272 7 1 5637 5908 181314957 181315225 1.510000e-120 444.0
35 TraesCS6B01G266800 chr2D 96.774 124 4 0 3869 3992 367919885 367920008 2.160000e-49 207.0
36 TraesCS6B01G266800 chr2D 92.727 55 4 0 1718 1772 221650735 221650789 4.910000e-11 80.5
37 TraesCS6B01G266800 chr1A 84.457 534 60 15 1 526 539785644 539785126 6.830000e-139 505.0
38 TraesCS6B01G266800 chr1D 95.572 271 9 1 5638 5908 487098580 487098313 1.180000e-116 431.0
39 TraesCS6B01G266800 chr1D 93.727 271 14 1 5638 5908 75913531 75913264 2.560000e-108 403.0
40 TraesCS6B01G266800 chr3D 94.834 271 11 1 5638 5908 441198601 441198868 2.550000e-113 420.0
41 TraesCS6B01G266800 chr3D 98.013 151 1 2 4478 4628 154616374 154616522 1.630000e-65 261.0
42 TraesCS6B01G266800 chr3D 91.549 142 9 2 3862 4002 335367316 335367455 6.040000e-45 193.0
43 TraesCS6B01G266800 chr7D 93.727 271 14 1 5638 5908 295342076 295342343 2.560000e-108 403.0
44 TraesCS6B01G266800 chr7D 85.938 128 18 0 1042 1169 575954918 575954791 2.870000e-28 137.0
45 TraesCS6B01G266800 chr7D 94.545 55 3 0 1718 1772 242786849 242786795 1.050000e-12 86.1
46 TraesCS6B01G266800 chr5A 93.040 273 16 1 5636 5908 100647840 100648109 4.290000e-106 396.0
47 TraesCS6B01G266800 chr5A 98.026 152 3 0 4478 4629 403285598 403285447 1.260000e-66 265.0
48 TraesCS6B01G266800 chr5B 98.658 149 2 0 4478 4626 6651859 6651711 1.260000e-66 265.0
49 TraesCS6B01G266800 chr4A 99.320 147 0 1 4478 4624 658953905 658953760 1.260000e-66 265.0
50 TraesCS6B01G266800 chr4A 90.110 91 9 0 1081 1171 733700014 733699924 1.040000e-22 119.0
51 TraesCS6B01G266800 chr4A 92.727 55 4 0 1718 1772 192625291 192625237 4.910000e-11 80.5
52 TraesCS6B01G266800 chr3B 98.667 150 0 2 4478 4625 520146392 520146243 1.260000e-66 265.0
53 TraesCS6B01G266800 chr3B 88.128 219 21 5 1 218 232643550 232643336 7.600000e-64 255.0
54 TraesCS6B01G266800 chr3B 96.032 126 5 0 3871 3996 507130989 507130864 7.760000e-49 206.0
55 TraesCS6B01G266800 chr3B 91.549 142 12 0 3856 3997 463130181 463130322 4.670000e-46 196.0
56 TraesCS6B01G266800 chr3B 92.727 55 4 0 1718 1772 245946607 245946661 4.910000e-11 80.5
57 TraesCS6B01G266800 chr3A 91.549 142 12 0 3856 3997 477610208 477610349 4.670000e-46 196.0
58 TraesCS6B01G266800 chr3A 92.727 55 4 0 1718 1772 251035759 251035813 4.910000e-11 80.5
59 TraesCS6B01G266800 chr7A 90.909 110 9 1 1061 1169 666811857 666811748 4.770000e-31 147.0
60 TraesCS6B01G266800 chr7A 87.234 94 12 0 1078 1171 7593408 7593501 2.250000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G266800 chr6B 479839606 479845513 5907 False 10911.0 10911 100.0000 1 5908 1 chr6B.!!$F2 5907
1 TraesCS6B01G266800 chr6B 479835246 479835766 520 True 830.0 830 95.3930 1 521 1 chr6B.!!$R2 520
2 TraesCS6B01G266800 chr6B 667888508 667889016 508 True 647.0 647 89.4640 1 522 1 chr6B.!!$R3 521
3 TraesCS6B01G266800 chr6A 480694122 480699273 5151 True 1723.5 4477 92.7575 519 5632 4 chr6A.!!$R1 5113
4 TraesCS6B01G266800 chr6D 340945762 340950648 4886 True 1373.2 3805 93.2882 521 5608 5 chr6D.!!$R2 5087
5 TraesCS6B01G266800 chr1B 677259217 677259737 520 True 813.0 813 94.8180 1 521 1 chr1B.!!$R1 520
6 TraesCS6B01G266800 chr1B 616091516 616092027 511 False 765.0 765 93.4740 1 521 1 chr1B.!!$F3 520
7 TraesCS6B01G266800 chr7B 333395585 333396105 520 False 785.0 785 93.8580 1 521 1 chr7B.!!$F1 520
8 TraesCS6B01G266800 chr2A 21935170 21935688 518 False 728.0 728 91.9850 1 521 1 chr2A.!!$F1 520
9 TraesCS6B01G266800 chr5D 123494645 123495152 507 False 579.0 579 87.2380 1 520 1 chr5D.!!$F1 519
10 TraesCS6B01G266800 chr2D 47510086 47510597 511 True 521.0 521 85.2550 1 521 1 chr2D.!!$R1 520
11 TraesCS6B01G266800 chr1A 539785126 539785644 518 True 505.0 505 84.4570 1 526 1 chr1A.!!$R1 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
932 1198 0.178961 ACAAAAGCCAACCTCTCCCC 60.179 55.000 0.00 0.00 0.00 4.81 F
1418 1742 0.110486 ATCTTTGGGCCAACGACTGT 59.890 50.000 25.64 9.36 0.00 3.55 F
1692 2049 0.824109 CCCAGAGCCTCATACGTTCA 59.176 55.000 0.00 0.00 0.00 3.18 F
1693 2050 1.471676 CCCAGAGCCTCATACGTTCAC 60.472 57.143 0.00 0.00 0.00 3.18 F
1694 2051 1.478510 CCAGAGCCTCATACGTTCACT 59.521 52.381 0.00 0.00 0.00 3.41 F
1696 2053 2.094494 CAGAGCCTCATACGTTCACTGT 60.094 50.000 0.00 0.00 0.00 3.55 F
1699 2056 2.299013 AGCCTCATACGTTCACTGTTCA 59.701 45.455 0.00 0.00 0.00 3.18 F
2665 3046 2.583143 GTTTGTACTTCAAGGTGCCCT 58.417 47.619 0.00 0.00 37.35 5.19 F
4505 4897 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2568 2949 1.081892 CAGCCACGTTCATTCCTGAG 58.918 55.000 0.00 0.00 31.68 3.35 R
2717 3100 3.603532 CAGCACCTAAATCTTCTGAGCA 58.396 45.455 0.00 0.00 0.00 4.26 R
3004 3387 3.628032 TGTGACAAAAGCCACGATAACAA 59.372 39.130 0.00 0.00 36.15 2.83 R
3265 3648 4.938226 CCATAGCCTTAGTTAAGCTATGCC 59.062 45.833 20.34 1.66 41.91 4.40 R
3613 3998 5.221722 ACAACAGTGCCTAGAGATCAAAAGA 60.222 40.000 0.00 0.00 0.00 2.52 R
3777 4162 8.904099 AAACTACAACAGCTTGACTTATAAGT 57.096 30.769 18.05 18.05 43.16 2.24 R
3869 4254 4.089361 GACAAGAATTTTGGGATGGAGGT 58.911 43.478 5.68 0.00 0.00 3.85 R
4517 4909 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58 R
5735 6141 0.105709 AGGGTGGTTTGGGAAACTGG 60.106 55.000 0.00 0.00 41.14 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.023291 TCTGTGGTAGAGATGTACATGCA 58.977 43.478 14.43 0.00 0.00 3.96
53 54 0.541863 CTTATCCTTGCAGGTCGGGT 59.458 55.000 0.00 0.00 36.53 5.28
247 263 1.794222 CGACGCAAGGGATTTGACC 59.206 57.895 0.00 0.00 46.39 4.02
351 368 1.129811 GGCCGAATCGAAACGAACAAT 59.870 47.619 3.36 0.00 39.99 2.71
462 479 3.630769 ACTGTATCGAGCGTATTCCTGAA 59.369 43.478 0.00 0.00 0.00 3.02
522 543 4.201980 TGACCGTGAGTGTATTTATCTCCG 60.202 45.833 0.00 0.00 0.00 4.63
526 547 5.506815 CCGTGAGTGTATTTATCTCCGCTAA 60.507 44.000 0.00 0.00 0.00 3.09
652 673 4.868116 GCGTGTGTGTGGTGGGGT 62.868 66.667 0.00 0.00 0.00 4.95
653 674 2.899838 CGTGTGTGTGGTGGGGTG 60.900 66.667 0.00 0.00 0.00 4.61
654 675 2.518349 GTGTGTGTGGTGGGGTGG 60.518 66.667 0.00 0.00 0.00 4.61
655 676 3.814906 TGTGTGTGGTGGGGTGGG 61.815 66.667 0.00 0.00 0.00 4.61
656 677 4.596585 GTGTGTGGTGGGGTGGGG 62.597 72.222 0.00 0.00 0.00 4.96
922 1188 2.322081 GCGCTACGGACAAAAGCCA 61.322 57.895 0.00 0.00 32.50 4.75
923 1189 1.847890 GCGCTACGGACAAAAGCCAA 61.848 55.000 0.00 0.00 32.50 4.52
931 1197 1.248486 GACAAAAGCCAACCTCTCCC 58.752 55.000 0.00 0.00 0.00 4.30
932 1198 0.178961 ACAAAAGCCAACCTCTCCCC 60.179 55.000 0.00 0.00 0.00 4.81
936 1202 2.285743 GCCAACCTCTCCCCTCCT 60.286 66.667 0.00 0.00 0.00 3.69
981 1247 4.939368 CGGCACCCAACGGAACCA 62.939 66.667 0.00 0.00 0.00 3.67
984 1250 2.983592 CACCCAACGGAACCAGGC 60.984 66.667 0.00 0.00 0.00 4.85
999 1291 4.778143 GGCCTCCGTGCGTTCCAT 62.778 66.667 0.00 0.00 0.00 3.41
1241 1539 1.346722 TCTCCACGGTTTTCTTCCCTC 59.653 52.381 0.00 0.00 0.00 4.30
1384 1708 1.740025 GGCTCAAAACTTCGCATAGCT 59.260 47.619 0.00 0.00 0.00 3.32
1390 1714 4.458989 TCAAAACTTCGCATAGCTTCCATT 59.541 37.500 0.00 0.00 0.00 3.16
1415 1739 0.521735 GTGATCTTTGGGCCAACGAC 59.478 55.000 25.64 18.96 0.00 4.34
1418 1742 0.110486 ATCTTTGGGCCAACGACTGT 59.890 50.000 25.64 9.36 0.00 3.55
1479 1804 6.562086 GCTGGCGCTAATAATTATTTTTGTGC 60.562 38.462 15.64 19.77 0.00 4.57
1509 1834 5.576774 GTGTTTGCTGAACTTAGCTTGTTTT 59.423 36.000 0.00 0.00 44.01 2.43
1552 1877 9.601217 TTGATGATGATGATGATGATAGATCAC 57.399 33.333 0.00 0.00 40.03 3.06
1553 1878 8.982723 TGATGATGATGATGATGATAGATCACT 58.017 33.333 0.00 0.00 40.03 3.41
1554 1879 9.825109 GATGATGATGATGATGATAGATCACTT 57.175 33.333 0.00 0.00 40.03 3.16
1555 1880 9.606631 ATGATGATGATGATGATAGATCACTTG 57.393 33.333 0.00 0.00 40.03 3.16
1577 1902 3.120304 GGACGTTCCTTCTGCAATTGTAC 60.120 47.826 7.40 0.00 32.53 2.90
1587 1912 4.041049 TCTGCAATTGTACTGCGTTTTTG 58.959 39.130 7.40 0.00 42.97 2.44
1595 1920 5.337219 TGTACTGCGTTTTTGTAGACATG 57.663 39.130 0.00 0.00 0.00 3.21
1630 1955 9.538508 GAAGAGCATAATTTTTCAAGCCATAAT 57.461 29.630 0.00 0.00 0.00 1.28
1680 2037 2.674796 ACAACTCGATTACCCAGAGC 57.325 50.000 0.00 0.00 35.56 4.09
1689 2046 2.154567 TTACCCAGAGCCTCATACGT 57.845 50.000 0.00 0.00 0.00 3.57
1690 2047 2.154567 TACCCAGAGCCTCATACGTT 57.845 50.000 0.00 0.00 0.00 3.99
1691 2048 0.824759 ACCCAGAGCCTCATACGTTC 59.175 55.000 0.00 0.00 0.00 3.95
1692 2049 0.824109 CCCAGAGCCTCATACGTTCA 59.176 55.000 0.00 0.00 0.00 3.18
1693 2050 1.471676 CCCAGAGCCTCATACGTTCAC 60.472 57.143 0.00 0.00 0.00 3.18
1694 2051 1.478510 CCAGAGCCTCATACGTTCACT 59.521 52.381 0.00 0.00 0.00 3.41
1695 2052 2.534298 CAGAGCCTCATACGTTCACTG 58.466 52.381 0.00 0.00 0.00 3.66
1696 2053 2.094494 CAGAGCCTCATACGTTCACTGT 60.094 50.000 0.00 0.00 0.00 3.55
1697 2054 2.563179 AGAGCCTCATACGTTCACTGTT 59.437 45.455 0.00 0.00 0.00 3.16
1698 2055 2.924290 GAGCCTCATACGTTCACTGTTC 59.076 50.000 0.00 0.00 0.00 3.18
1699 2056 2.299013 AGCCTCATACGTTCACTGTTCA 59.701 45.455 0.00 0.00 0.00 3.18
1700 2057 2.668457 GCCTCATACGTTCACTGTTCAG 59.332 50.000 0.00 0.00 0.00 3.02
1701 2058 3.614150 GCCTCATACGTTCACTGTTCAGA 60.614 47.826 6.83 0.00 0.00 3.27
1702 2059 3.921021 CCTCATACGTTCACTGTTCAGAC 59.079 47.826 6.83 0.00 0.00 3.51
1721 2078 7.669089 TCAGACCACCATCATTTATGTACTA 57.331 36.000 0.00 0.00 33.34 1.82
1748 2105 4.506654 CCTCCGTTCACAAATATAAGACGG 59.493 45.833 5.73 5.73 39.30 4.79
1751 2108 5.577945 TCCGTTCACAAATATAAGACGGTTC 59.422 40.000 11.18 0.00 39.04 3.62
1757 2114 6.919662 TCACAAATATAAGACGGTTCGGATAC 59.080 38.462 0.00 0.00 0.00 2.24
1830 2188 7.328277 TGGAAAATCCTATATTTGTGAACGG 57.672 36.000 0.00 0.00 37.46 4.44
1874 2252 3.255395 TCGTTCAGGTGTACCGACAAATA 59.745 43.478 0.00 0.00 42.08 1.40
1906 2284 6.399743 TGTGCGGATAATTTGACAGTTACTA 58.600 36.000 0.00 0.00 0.00 1.82
1991 2371 5.830457 TGTGACATTAATGTGGAAAACCTGA 59.170 36.000 25.42 0.00 41.95 3.86
2270 2651 5.637006 TCTCCGGTAAAACCATTTTCATG 57.363 39.130 0.00 0.00 38.47 3.07
2568 2949 3.282021 TCCATCTGCCATGCTTAGAAAC 58.718 45.455 0.00 0.00 0.00 2.78
2654 3035 8.463930 TCATCTTTCATGAAAGGTTTGTACTT 57.536 30.769 36.07 14.94 45.80 2.24
2665 3046 2.583143 GTTTGTACTTCAAGGTGCCCT 58.417 47.619 0.00 0.00 37.35 5.19
2680 3063 3.181453 GGTGCCCTTCCTCTAAATAGTCC 60.181 52.174 0.00 0.00 0.00 3.85
2717 3100 6.013984 TCGTCAGTTAATCCTTACCTCCTTTT 60.014 38.462 0.00 0.00 0.00 2.27
2937 3320 7.862741 TCTAGTATTTATAACATGCGGTTCG 57.137 36.000 0.00 0.00 40.96 3.95
2991 3374 7.893124 AATTCTTACAGCTCATTCATCCATT 57.107 32.000 0.00 0.00 0.00 3.16
3217 3600 5.605564 TTGATGTTGAAACGGTATGTGAG 57.394 39.130 0.00 0.00 0.00 3.51
3441 3826 6.071447 TGCTCCTGATTTAAGCATAGCAAAAA 60.071 34.615 14.86 0.00 40.91 1.94
3502 3887 7.647715 ACAAACTGTATATGCTTGTTTTGTCAC 59.352 33.333 10.73 0.00 0.00 3.67
3513 3898 5.007234 GCTTGTTTTGTCACCATTTTAACCC 59.993 40.000 0.00 0.00 0.00 4.11
3561 3946 7.980662 TCGATGGCATGTTGAATTCATATTTTT 59.019 29.630 9.40 0.00 0.00 1.94
3613 3998 5.824624 ACTTCTCATCAACTGACATTTGTGT 59.175 36.000 5.54 0.00 0.00 3.72
3777 4162 7.987750 TTCATGTTACCAGCAGTTGTTATAA 57.012 32.000 0.00 0.00 0.00 0.98
3875 4260 9.725206 ATAGACCTTTCTTTACTATTACCTCCA 57.275 33.333 0.00 0.00 32.75 3.86
3877 4262 8.706521 AGACCTTTCTTTACTATTACCTCCATC 58.293 37.037 0.00 0.00 0.00 3.51
3878 4263 7.803131 ACCTTTCTTTACTATTACCTCCATCC 58.197 38.462 0.00 0.00 0.00 3.51
3879 4264 7.147355 ACCTTTCTTTACTATTACCTCCATCCC 60.147 40.741 0.00 0.00 0.00 3.85
3880 4265 7.147373 CCTTTCTTTACTATTACCTCCATCCCA 60.147 40.741 0.00 0.00 0.00 4.37
3885 4270 9.421399 CTTTACTATTACCTCCATCCCAAAATT 57.579 33.333 0.00 0.00 0.00 1.82
3886 4271 8.990163 TTACTATTACCTCCATCCCAAAATTC 57.010 34.615 0.00 0.00 0.00 2.17
3887 4272 7.226059 ACTATTACCTCCATCCCAAAATTCT 57.774 36.000 0.00 0.00 0.00 2.40
3888 4273 7.652554 ACTATTACCTCCATCCCAAAATTCTT 58.347 34.615 0.00 0.00 0.00 2.52
3890 4275 4.132122 ACCTCCATCCCAAAATTCTTGT 57.868 40.909 0.00 0.00 0.00 3.16
3891 4276 4.089361 ACCTCCATCCCAAAATTCTTGTC 58.911 43.478 0.00 0.00 0.00 3.18
3892 4277 4.202716 ACCTCCATCCCAAAATTCTTGTCT 60.203 41.667 0.00 0.00 0.00 3.41
3893 4278 4.774200 CCTCCATCCCAAAATTCTTGTCTT 59.226 41.667 0.00 0.00 0.00 3.01
3894 4279 5.951747 CCTCCATCCCAAAATTCTTGTCTTA 59.048 40.000 0.00 0.00 0.00 2.10
3895 4280 6.437162 CCTCCATCCCAAAATTCTTGTCTTAA 59.563 38.462 0.00 0.00 0.00 1.85
3896 4281 7.039082 CCTCCATCCCAAAATTCTTGTCTTAAA 60.039 37.037 0.00 0.00 0.00 1.52
3897 4282 8.434589 TCCATCCCAAAATTCTTGTCTTAAAT 57.565 30.769 0.00 0.00 0.00 1.40
3898 4283 8.879227 TCCATCCCAAAATTCTTGTCTTAAATT 58.121 29.630 0.00 0.00 0.00 1.82
3899 4284 9.506018 CCATCCCAAAATTCTTGTCTTAAATTT 57.494 29.630 0.00 0.00 34.86 1.82
3933 4318 8.420374 ACGGATGTATCTAACACTAAAACATG 57.580 34.615 0.00 0.00 42.09 3.21
3934 4319 8.255206 ACGGATGTATCTAACACTAAAACATGA 58.745 33.333 0.00 0.00 42.09 3.07
3935 4320 9.093970 CGGATGTATCTAACACTAAAACATGAA 57.906 33.333 0.00 0.00 42.09 2.57
3947 4332 9.261180 ACACTAAAACATGAATAGATACATCCG 57.739 33.333 0.00 0.00 0.00 4.18
3948 4333 9.261180 CACTAAAACATGAATAGATACATCCGT 57.739 33.333 0.00 0.00 0.00 4.69
3979 4364 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
3980 4365 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
3981 4366 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
3982 4367 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
4009 4394 5.428253 GGAGTACATCTGAAAGGTAATGCA 58.572 41.667 0.00 0.00 0.00 3.96
4031 4416 1.335182 GTAGCAGAGCTATCTCACGCA 59.665 52.381 1.68 0.00 43.30 5.24
4132 4517 1.605232 TGCATATTTGATGAGCAGGCG 59.395 47.619 0.00 0.00 0.00 5.52
4188 4573 7.387948 GGTCAGTAGCAGAAGTTATTTCTTTCA 59.612 37.037 0.00 0.00 43.68 2.69
4313 4701 3.211045 GTTTCTGCCTTGGTACTGTCAA 58.789 45.455 0.00 0.00 0.00 3.18
4319 4707 4.720046 TGCCTTGGTACTGTCAATACAAA 58.280 39.130 0.00 0.00 34.49 2.83
4370 4758 1.753930 TTGGGCAGCTATCATGTGTG 58.246 50.000 0.00 0.00 0.00 3.82
4433 4821 4.308526 TTTGGTATGTGCTGATACCCAA 57.691 40.909 17.28 12.14 45.21 4.12
4452 4840 5.183904 ACCCAATTCTTCTCCAAAATCGAAG 59.816 40.000 0.00 0.00 36.40 3.79
4454 4842 6.317857 CCAATTCTTCTCCAAAATCGAAGAC 58.682 40.000 0.00 0.00 41.84 3.01
4455 4843 6.317857 CAATTCTTCTCCAAAATCGAAGACC 58.682 40.000 0.00 0.00 41.84 3.85
4458 4850 5.373222 TCTTCTCCAAAATCGAAGACCAAA 58.627 37.500 0.00 0.00 42.51 3.28
4486 4878 8.762481 AATTTGTATTGTAAATAGTCCTCCCC 57.238 34.615 0.00 0.00 0.00 4.81
4487 4879 6.894735 TTGTATTGTAAATAGTCCTCCCCA 57.105 37.500 0.00 0.00 0.00 4.96
4488 4880 6.243216 TGTATTGTAAATAGTCCTCCCCAC 57.757 41.667 0.00 0.00 0.00 4.61
4489 4881 5.968167 TGTATTGTAAATAGTCCTCCCCACT 59.032 40.000 0.00 0.00 0.00 4.00
4490 4882 6.445786 TGTATTGTAAATAGTCCTCCCCACTT 59.554 38.462 0.00 0.00 0.00 3.16
4491 4883 4.837093 TGTAAATAGTCCTCCCCACTTG 57.163 45.455 0.00 0.00 0.00 3.16
4492 4884 4.172807 TGTAAATAGTCCTCCCCACTTGT 58.827 43.478 0.00 0.00 0.00 3.16
4493 4885 3.721087 AAATAGTCCTCCCCACTTGTG 57.279 47.619 0.00 0.00 0.00 3.33
4494 4886 0.912486 ATAGTCCTCCCCACTTGTGC 59.088 55.000 0.00 0.00 0.00 4.57
4495 4887 1.198759 TAGTCCTCCCCACTTGTGCC 61.199 60.000 0.00 0.00 0.00 5.01
4496 4888 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
4497 4889 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
4498 4890 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
4499 4891 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
4500 4892 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
4501 4893 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
4502 4894 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
4503 4895 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
4504 4896 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
4505 4897 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
4506 4898 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
4507 4899 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
4508 4900 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
4509 4901 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
4510 4902 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
4511 4903 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
4512 4904 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
4513 4905 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
4514 4906 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
4515 4907 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
4526 4918 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
4527 4919 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
4528 4920 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
4529 4921 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
4530 4922 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
4531 4923 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
4532 4924 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
4533 4925 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
4534 4926 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
4535 4927 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
4536 4928 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
4537 4929 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
4538 4930 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
4539 4931 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
4549 4941 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
4550 4942 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
4551 4943 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
4552 4944 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
4553 4945 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
4554 4946 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
4555 4947 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
4556 4948 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
4557 4949 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
4558 4950 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
4559 4951 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
4560 4952 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
4561 4953 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
4562 4954 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
4563 4955 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
4564 4956 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
4565 4957 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
4566 4958 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
4567 4959 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
4568 4960 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
4569 4961 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
4570 4962 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
4571 4963 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
4572 4964 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
4573 4965 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
4574 4966 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
4575 4967 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
4576 4968 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
4577 4969 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
4578 4970 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
4579 4971 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
4580 4972 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
4581 4973 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
4583 4975 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
4584 4976 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
4585 4977 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
4586 4978 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
4587 4979 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
4588 4980 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
4589 4981 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
4596 4988 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
4597 4989 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
4598 4990 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
4599 4991 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
4600 4992 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
4601 4993 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
4602 4994 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
4603 4995 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
4604 4996 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
4605 4997 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
4606 4998 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
4607 4999 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
4608 5000 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
4609 5001 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
4610 5002 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
4611 5003 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
4612 5004 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
4613 5005 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
4614 5006 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
4615 5007 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
4616 5008 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
4617 5009 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
4618 5010 0.773644 ATGCACTGGGTCTGTCCTTT 59.226 50.000 0.00 0.00 36.25 3.11
4619 5011 0.179020 TGCACTGGGTCTGTCCTTTG 60.179 55.000 0.00 0.00 36.25 2.77
4620 5012 0.179018 GCACTGGGTCTGTCCTTTGT 60.179 55.000 0.00 0.00 36.25 2.83
4621 5013 1.071699 GCACTGGGTCTGTCCTTTGTA 59.928 52.381 0.00 0.00 36.25 2.41
4622 5014 2.486548 GCACTGGGTCTGTCCTTTGTAA 60.487 50.000 0.00 0.00 36.25 2.41
4623 5015 3.815809 CACTGGGTCTGTCCTTTGTAAA 58.184 45.455 0.00 0.00 36.25 2.01
4624 5016 4.398319 CACTGGGTCTGTCCTTTGTAAAT 58.602 43.478 0.00 0.00 36.25 1.40
4625 5017 5.556915 CACTGGGTCTGTCCTTTGTAAATA 58.443 41.667 0.00 0.00 36.25 1.40
4626 5018 5.643777 CACTGGGTCTGTCCTTTGTAAATAG 59.356 44.000 0.00 0.00 36.25 1.73
4627 5019 5.309806 ACTGGGTCTGTCCTTTGTAAATAGT 59.690 40.000 0.00 0.00 36.25 2.12
4628 5020 5.801380 TGGGTCTGTCCTTTGTAAATAGTC 58.199 41.667 0.00 0.00 36.25 2.59
4629 5021 5.308497 TGGGTCTGTCCTTTGTAAATAGTCA 59.692 40.000 0.00 0.00 36.25 3.41
4630 5022 6.183361 TGGGTCTGTCCTTTGTAAATAGTCAA 60.183 38.462 0.00 0.00 36.25 3.18
4631 5023 6.148976 GGGTCTGTCCTTTGTAAATAGTCAAC 59.851 42.308 0.00 0.00 36.25 3.18
4632 5024 6.148976 GGTCTGTCCTTTGTAAATAGTCAACC 59.851 42.308 0.00 0.00 0.00 3.77
4633 5025 6.935208 GTCTGTCCTTTGTAAATAGTCAACCT 59.065 38.462 0.00 0.00 0.00 3.50
4656 5048 6.823182 CCTTTCAAGGGAAAATGTGTTTCTTT 59.177 34.615 0.00 0.00 42.18 2.52
4681 5073 0.696501 GTTGGGCCTGGGAAGTAAGA 59.303 55.000 4.53 0.00 0.00 2.10
4682 5074 1.074889 GTTGGGCCTGGGAAGTAAGAA 59.925 52.381 4.53 0.00 0.00 2.52
4683 5075 1.451449 TGGGCCTGGGAAGTAAGAAA 58.549 50.000 4.53 0.00 0.00 2.52
4684 5076 2.000048 TGGGCCTGGGAAGTAAGAAAT 59.000 47.619 4.53 0.00 0.00 2.17
4685 5077 2.291540 TGGGCCTGGGAAGTAAGAAATG 60.292 50.000 4.53 0.00 0.00 2.32
4686 5078 2.025321 GGGCCTGGGAAGTAAGAAATGA 60.025 50.000 0.84 0.00 0.00 2.57
4687 5079 3.373110 GGGCCTGGGAAGTAAGAAATGAT 60.373 47.826 0.84 0.00 0.00 2.45
4688 5080 4.281657 GGCCTGGGAAGTAAGAAATGATT 58.718 43.478 0.00 0.00 0.00 2.57
4689 5081 4.711846 GGCCTGGGAAGTAAGAAATGATTT 59.288 41.667 0.00 0.00 0.00 2.17
4693 5085 7.315890 CCTGGGAAGTAAGAAATGATTTGAAC 58.684 38.462 0.00 0.00 0.00 3.18
4743 5135 7.870954 CAGCATTCGTATTAGTTCCATTACCTA 59.129 37.037 0.00 0.00 0.00 3.08
4802 5194 7.969536 ACTAACATGTATCCTATGCAACATC 57.030 36.000 0.00 0.00 30.32 3.06
4846 5238 3.767131 TCGTACAATTCCACCTCTGATGA 59.233 43.478 0.00 0.00 0.00 2.92
4975 5367 1.209127 GTTTGCACGATTCACCGGG 59.791 57.895 6.32 0.00 35.77 5.73
5025 5417 1.344763 AGATGGTGCCGCCTATAGTTC 59.655 52.381 0.00 0.00 38.35 3.01
5047 5439 4.085733 CCATCTCGATCTCTGAATAGGGT 58.914 47.826 0.00 0.00 0.00 4.34
5048 5440 4.526262 CCATCTCGATCTCTGAATAGGGTT 59.474 45.833 0.00 0.00 0.00 4.11
5049 5441 5.011533 CCATCTCGATCTCTGAATAGGGTTT 59.988 44.000 0.00 0.00 0.00 3.27
5125 5517 3.528532 GAACCGTAGAATGTGTAAGGGG 58.471 50.000 0.00 0.00 0.00 4.79
5170 5562 8.410673 TTCCATAAGGTGAGATCTGTCTATAC 57.589 38.462 0.00 0.00 33.31 1.47
5194 5586 7.297614 ACCCTGATGTGTATATATTTTTGCCT 58.702 34.615 0.00 0.00 0.00 4.75
5230 5622 4.660611 TCCCCCGGTACCTTGGCA 62.661 66.667 10.90 0.00 0.00 4.92
5232 5635 3.642503 CCCCGGTACCTTGGCACA 61.643 66.667 10.90 0.00 0.00 4.57
5349 5752 1.960689 TGAGTTCAGTCGGTGATGTCA 59.039 47.619 0.00 0.00 34.17 3.58
5376 5781 3.123621 CGTTTGTGTCTGGCAAGATACTC 59.876 47.826 17.83 8.40 43.13 2.59
5388 5793 2.755655 CAAGATACTCTCCCGTGTGACT 59.244 50.000 0.00 0.00 0.00 3.41
5412 5818 9.881649 ACTATGACATAAGCATAATACTCCATG 57.118 33.333 0.00 0.00 0.00 3.66
5415 5821 7.508687 TGACATAAGCATAATACTCCATGTGT 58.491 34.615 0.00 0.00 0.00 3.72
5448 5854 6.716628 TGAGAATTGCTTTCAGTTGAGGTTAT 59.283 34.615 3.37 0.00 36.75 1.89
5487 5893 2.286772 GGGTTATCATAAACGCGGCTTG 60.287 50.000 12.47 2.37 33.39 4.01
5491 5897 3.569250 ATCATAAACGCGGCTTGTTTT 57.431 38.095 12.47 2.87 39.96 2.43
5493 5899 1.641878 CATAAACGCGGCTTGTTTTCG 59.358 47.619 12.47 1.11 39.96 3.46
5539 5945 3.807622 GCATTGCGTATGAGCCTTTACTA 59.192 43.478 3.04 0.00 36.26 1.82
5540 5946 4.272504 GCATTGCGTATGAGCCTTTACTAA 59.727 41.667 3.04 0.00 36.26 2.24
5576 5982 0.036952 CCAGAAGGTGACTCGTGCAT 60.037 55.000 0.00 0.00 42.68 3.96
5580 5986 1.873591 GAAGGTGACTCGTGCATTTGT 59.126 47.619 0.00 0.00 42.68 2.83
5591 5997 7.041712 TGACTCGTGCATTTGTCATTTAAGTTA 60.042 33.333 12.44 0.00 34.94 2.24
5611 6017 7.639162 AGTTATGTAACGAGAAAGAACACAG 57.361 36.000 0.00 0.00 40.96 3.66
5612 6018 4.992381 ATGTAACGAGAAAGAACACAGC 57.008 40.909 0.00 0.00 0.00 4.40
5632 6038 1.978097 CGAACCATCGCATTTGTGTTG 59.022 47.619 0.00 0.00 42.96 3.33
5633 6039 2.604373 CGAACCATCGCATTTGTGTTGT 60.604 45.455 2.55 0.00 42.96 3.32
5634 6040 2.420628 ACCATCGCATTTGTGTTGTG 57.579 45.000 2.55 0.00 0.00 3.33
5635 6041 1.680735 ACCATCGCATTTGTGTTGTGT 59.319 42.857 2.55 0.00 0.00 3.72
5636 6042 2.881513 ACCATCGCATTTGTGTTGTGTA 59.118 40.909 2.55 0.00 0.00 2.90
5637 6043 3.505680 ACCATCGCATTTGTGTTGTGTAT 59.494 39.130 2.55 0.00 0.00 2.29
5638 6044 3.853103 CCATCGCATTTGTGTTGTGTATG 59.147 43.478 2.55 0.00 0.00 2.39
5639 6045 4.475028 CATCGCATTTGTGTTGTGTATGT 58.525 39.130 0.00 0.00 0.00 2.29
5640 6046 4.560136 TCGCATTTGTGTTGTGTATGTT 57.440 36.364 0.00 0.00 0.00 2.71
5641 6047 5.674933 TCGCATTTGTGTTGTGTATGTTA 57.325 34.783 0.00 0.00 0.00 2.41
5642 6048 5.684850 TCGCATTTGTGTTGTGTATGTTAG 58.315 37.500 0.00 0.00 0.00 2.34
5643 6049 5.467063 TCGCATTTGTGTTGTGTATGTTAGA 59.533 36.000 0.00 0.00 0.00 2.10
5644 6050 5.563751 CGCATTTGTGTTGTGTATGTTAGAC 59.436 40.000 0.00 0.00 0.00 2.59
5645 6051 6.565811 CGCATTTGTGTTGTGTATGTTAGACT 60.566 38.462 0.00 0.00 0.00 3.24
5646 6052 6.578545 GCATTTGTGTTGTGTATGTTAGACTG 59.421 38.462 0.00 0.00 0.00 3.51
5647 6053 7.639039 CATTTGTGTTGTGTATGTTAGACTGT 58.361 34.615 0.00 0.00 0.00 3.55
5648 6054 8.769891 CATTTGTGTTGTGTATGTTAGACTGTA 58.230 33.333 0.00 0.00 0.00 2.74
5649 6055 8.896320 TTTGTGTTGTGTATGTTAGACTGTAT 57.104 30.769 0.00 0.00 0.00 2.29
5650 6056 9.984190 TTTGTGTTGTGTATGTTAGACTGTATA 57.016 29.630 0.00 0.00 0.00 1.47
5654 6060 9.940166 TGTTGTGTATGTTAGACTGTATATACG 57.060 33.333 8.33 5.91 0.00 3.06
5655 6061 9.941664 GTTGTGTATGTTAGACTGTATATACGT 57.058 33.333 8.33 8.83 0.00 3.57
5663 6069 9.605275 TGTTAGACTGTATATACGTAGTCTTGT 57.395 33.333 27.75 14.96 45.48 3.16
5669 6075 9.160496 ACTGTATATACGTAGTCTTGTATAGGC 57.840 37.037 8.33 6.37 43.93 3.93
5670 6076 8.498054 TGTATATACGTAGTCTTGTATAGGCC 57.502 38.462 8.33 0.00 43.93 5.19
5671 6077 8.324306 TGTATATACGTAGTCTTGTATAGGCCT 58.676 37.037 11.78 11.78 43.93 5.19
5672 6078 9.171877 GTATATACGTAGTCTTGTATAGGCCTT 57.828 37.037 12.58 0.81 43.93 4.35
5673 6079 4.650754 ACGTAGTCTTGTATAGGCCTTG 57.349 45.455 12.58 0.00 29.74 3.61
5674 6080 4.021916 ACGTAGTCTTGTATAGGCCTTGT 58.978 43.478 12.58 2.39 29.74 3.16
5675 6081 5.195940 ACGTAGTCTTGTATAGGCCTTGTA 58.804 41.667 12.58 1.17 29.74 2.41
5676 6082 5.832060 ACGTAGTCTTGTATAGGCCTTGTAT 59.168 40.000 12.58 0.00 29.74 2.29
5677 6083 6.323225 ACGTAGTCTTGTATAGGCCTTGTATT 59.677 38.462 12.58 0.00 29.74 1.89
5678 6084 7.503566 ACGTAGTCTTGTATAGGCCTTGTATTA 59.496 37.037 12.58 0.00 29.74 0.98
5679 6085 8.521176 CGTAGTCTTGTATAGGCCTTGTATTAT 58.479 37.037 12.58 0.00 0.00 1.28
5682 6088 8.813951 AGTCTTGTATAGGCCTTGTATTATACC 58.186 37.037 12.58 0.00 31.22 2.73
5683 6089 8.813951 GTCTTGTATAGGCCTTGTATTATACCT 58.186 37.037 12.58 0.00 31.22 3.08
5684 6090 9.032624 TCTTGTATAGGCCTTGTATTATACCTC 57.967 37.037 12.58 0.00 31.22 3.85
5685 6091 8.967779 TTGTATAGGCCTTGTATTATACCTCT 57.032 34.615 12.58 0.00 31.22 3.69
5686 6092 8.967779 TGTATAGGCCTTGTATTATACCTCTT 57.032 34.615 12.58 0.00 31.22 2.85
5687 6093 8.812972 TGTATAGGCCTTGTATTATACCTCTTG 58.187 37.037 12.58 0.00 31.22 3.02
5688 6094 5.568620 AGGCCTTGTATTATACCTCTTGG 57.431 43.478 0.00 0.00 39.83 3.61
5705 6111 8.338072 ACCTCTTGGTACGTCTATATAATGAG 57.662 38.462 0.00 0.00 46.43 2.90
5706 6112 8.162085 ACCTCTTGGTACGTCTATATAATGAGA 58.838 37.037 0.00 0.00 46.43 3.27
5707 6113 9.179909 CCTCTTGGTACGTCTATATAATGAGAT 57.820 37.037 0.00 0.00 0.00 2.75
5710 6116 9.938670 CTTGGTACGTCTATATAATGAGATAGC 57.061 37.037 0.00 0.00 28.58 2.97
5711 6117 8.447924 TGGTACGTCTATATAATGAGATAGCC 57.552 38.462 0.00 0.00 28.58 3.93
5712 6118 8.050930 TGGTACGTCTATATAATGAGATAGCCA 58.949 37.037 0.00 0.00 28.58 4.75
5713 6119 8.344098 GGTACGTCTATATAATGAGATAGCCAC 58.656 40.741 0.00 0.00 28.58 5.01
5714 6120 7.939784 ACGTCTATATAATGAGATAGCCACA 57.060 36.000 0.00 0.00 28.58 4.17
5715 6121 7.763356 ACGTCTATATAATGAGATAGCCACAC 58.237 38.462 0.00 0.00 28.58 3.82
5716 6122 7.148052 ACGTCTATATAATGAGATAGCCACACC 60.148 40.741 0.00 0.00 28.58 4.16
5717 6123 7.493367 GTCTATATAATGAGATAGCCACACCC 58.507 42.308 0.00 0.00 28.58 4.61
5718 6124 7.343316 GTCTATATAATGAGATAGCCACACCCT 59.657 40.741 0.00 0.00 28.58 4.34
5719 6125 4.630644 ATAATGAGATAGCCACACCCTG 57.369 45.455 0.00 0.00 0.00 4.45
5720 6126 1.885049 ATGAGATAGCCACACCCTGT 58.115 50.000 0.00 0.00 0.00 4.00
5721 6127 1.656587 TGAGATAGCCACACCCTGTT 58.343 50.000 0.00 0.00 0.00 3.16
5722 6128 1.985159 TGAGATAGCCACACCCTGTTT 59.015 47.619 0.00 0.00 0.00 2.83
5723 6129 2.375174 TGAGATAGCCACACCCTGTTTT 59.625 45.455 0.00 0.00 0.00 2.43
5724 6130 3.585289 TGAGATAGCCACACCCTGTTTTA 59.415 43.478 0.00 0.00 0.00 1.52
5725 6131 4.192317 GAGATAGCCACACCCTGTTTTAG 58.808 47.826 0.00 0.00 0.00 1.85
5726 6132 2.871096 TAGCCACACCCTGTTTTAGG 57.129 50.000 0.00 0.00 46.88 2.69
5735 6141 1.439679 CCTGTTTTAGGGTGTCGAGC 58.560 55.000 0.00 0.00 43.33 5.03
5736 6142 1.439679 CTGTTTTAGGGTGTCGAGCC 58.560 55.000 0.00 0.00 40.40 4.70
5737 6143 0.759959 TGTTTTAGGGTGTCGAGCCA 59.240 50.000 8.07 0.00 42.81 4.75
5738 6144 1.270625 TGTTTTAGGGTGTCGAGCCAG 60.271 52.381 8.07 0.00 42.81 4.85
5739 6145 1.053424 TTTTAGGGTGTCGAGCCAGT 58.947 50.000 8.07 0.00 42.81 4.00
5740 6146 1.053424 TTTAGGGTGTCGAGCCAGTT 58.947 50.000 8.07 0.00 42.81 3.16
5741 6147 1.053424 TTAGGGTGTCGAGCCAGTTT 58.947 50.000 8.07 0.00 42.81 2.66
5742 6148 0.606604 TAGGGTGTCGAGCCAGTTTC 59.393 55.000 8.07 0.00 42.81 2.78
5743 6149 1.671379 GGGTGTCGAGCCAGTTTCC 60.671 63.158 8.07 0.00 39.79 3.13
5744 6150 1.671379 GGTGTCGAGCCAGTTTCCC 60.671 63.158 1.39 0.00 0.00 3.97
5745 6151 1.070786 GTGTCGAGCCAGTTTCCCA 59.929 57.895 0.00 0.00 0.00 4.37
5746 6152 0.534203 GTGTCGAGCCAGTTTCCCAA 60.534 55.000 0.00 0.00 0.00 4.12
5747 6153 0.181587 TGTCGAGCCAGTTTCCCAAA 59.818 50.000 0.00 0.00 0.00 3.28
5748 6154 0.591659 GTCGAGCCAGTTTCCCAAAC 59.408 55.000 0.00 0.00 41.69 2.93
5749 6155 0.536460 TCGAGCCAGTTTCCCAAACC 60.536 55.000 0.00 0.00 42.34 3.27
5750 6156 0.821711 CGAGCCAGTTTCCCAAACCA 60.822 55.000 0.00 0.00 42.34 3.67
5751 6157 0.673985 GAGCCAGTTTCCCAAACCAC 59.326 55.000 0.00 0.00 42.34 4.16
5752 6158 0.759060 AGCCAGTTTCCCAAACCACC 60.759 55.000 0.00 0.00 42.34 4.61
5753 6159 1.754380 GCCAGTTTCCCAAACCACCC 61.754 60.000 0.00 0.00 42.34 4.61
5754 6160 0.105709 CCAGTTTCCCAAACCACCCT 60.106 55.000 0.00 0.00 42.34 4.34
5755 6161 1.146152 CCAGTTTCCCAAACCACCCTA 59.854 52.381 0.00 0.00 42.34 3.53
5756 6162 2.225267 CCAGTTTCCCAAACCACCCTAT 60.225 50.000 0.00 0.00 42.34 2.57
5757 6163 2.825532 CAGTTTCCCAAACCACCCTATG 59.174 50.000 0.00 0.00 42.34 2.23
5758 6164 2.449345 AGTTTCCCAAACCACCCTATGT 59.551 45.455 0.00 0.00 42.34 2.29
5759 6165 3.116900 AGTTTCCCAAACCACCCTATGTT 60.117 43.478 0.00 0.00 42.34 2.71
5760 6166 3.621682 TTCCCAAACCACCCTATGTTT 57.378 42.857 0.00 0.00 35.15 2.83
5761 6167 3.621682 TCCCAAACCACCCTATGTTTT 57.378 42.857 0.00 0.00 32.60 2.43
5762 6168 4.743705 TCCCAAACCACCCTATGTTTTA 57.256 40.909 0.00 0.00 32.60 1.52
5763 6169 4.409187 TCCCAAACCACCCTATGTTTTAC 58.591 43.478 0.00 0.00 32.60 2.01
5764 6170 4.140994 TCCCAAACCACCCTATGTTTTACA 60.141 41.667 0.00 0.00 32.60 2.41
5765 6171 4.775253 CCCAAACCACCCTATGTTTTACAT 59.225 41.667 0.00 0.00 42.35 2.29
5766 6172 5.337169 CCCAAACCACCCTATGTTTTACATG 60.337 44.000 2.68 0.00 39.53 3.21
5767 6173 5.337169 CCAAACCACCCTATGTTTTACATGG 60.337 44.000 0.00 0.00 39.53 3.66
5768 6174 4.668138 ACCACCCTATGTTTTACATGGT 57.332 40.909 0.00 0.13 39.53 3.55
5769 6175 5.782677 ACCACCCTATGTTTTACATGGTA 57.217 39.130 0.00 0.00 39.53 3.25
5770 6176 6.335781 ACCACCCTATGTTTTACATGGTAT 57.664 37.500 0.00 0.00 39.53 2.73
5771 6177 6.362248 ACCACCCTATGTTTTACATGGTATC 58.638 40.000 0.00 0.00 39.53 2.24
5772 6178 6.069323 ACCACCCTATGTTTTACATGGTATCA 60.069 38.462 0.00 0.00 39.53 2.15
5773 6179 6.486657 CCACCCTATGTTTTACATGGTATCAG 59.513 42.308 0.00 0.00 39.53 2.90
5774 6180 7.054124 CACCCTATGTTTTACATGGTATCAGT 58.946 38.462 0.00 0.00 39.53 3.41
5775 6181 7.556275 CACCCTATGTTTTACATGGTATCAGTT 59.444 37.037 0.00 0.00 39.53 3.16
5776 6182 8.113462 ACCCTATGTTTTACATGGTATCAGTTT 58.887 33.333 0.00 0.00 39.53 2.66
5777 6183 9.621629 CCCTATGTTTTACATGGTATCAGTTTA 57.378 33.333 0.00 0.00 39.53 2.01
5781 6187 8.927675 TGTTTTACATGGTATCAGTTTAGGTT 57.072 30.769 0.00 0.00 0.00 3.50
5784 6190 8.706492 TTTACATGGTATCAGTTTAGGTTACG 57.294 34.615 0.00 0.00 0.00 3.18
5785 6191 6.534475 ACATGGTATCAGTTTAGGTTACGA 57.466 37.500 0.00 0.00 0.00 3.43
5786 6192 7.120923 ACATGGTATCAGTTTAGGTTACGAT 57.879 36.000 0.00 0.00 0.00 3.73
5787 6193 6.984474 ACATGGTATCAGTTTAGGTTACGATG 59.016 38.462 0.00 0.00 36.02 3.84
5788 6194 6.534475 TGGTATCAGTTTAGGTTACGATGT 57.466 37.500 0.00 0.00 0.00 3.06
5789 6195 6.567050 TGGTATCAGTTTAGGTTACGATGTC 58.433 40.000 0.00 0.00 0.00 3.06
5790 6196 6.379133 TGGTATCAGTTTAGGTTACGATGTCT 59.621 38.462 0.00 0.00 0.00 3.41
5791 6197 7.093640 TGGTATCAGTTTAGGTTACGATGTCTT 60.094 37.037 0.00 0.00 0.00 3.01
5792 6198 7.434602 GGTATCAGTTTAGGTTACGATGTCTTC 59.565 40.741 0.00 0.00 0.00 2.87
5793 6199 5.717119 TCAGTTTAGGTTACGATGTCTTCC 58.283 41.667 0.00 0.00 0.00 3.46
5794 6200 4.561606 CAGTTTAGGTTACGATGTCTTCCG 59.438 45.833 0.00 0.00 0.00 4.30
5795 6201 2.857592 TAGGTTACGATGTCTTCCGC 57.142 50.000 0.00 0.00 0.00 5.54
5796 6202 1.183549 AGGTTACGATGTCTTCCGCT 58.816 50.000 0.00 0.00 0.00 5.52
5797 6203 1.135083 AGGTTACGATGTCTTCCGCTG 60.135 52.381 0.00 0.00 0.00 5.18
5798 6204 0.645868 GTTACGATGTCTTCCGCTGC 59.354 55.000 0.00 0.00 0.00 5.25
5799 6205 0.245266 TTACGATGTCTTCCGCTGCA 59.755 50.000 0.00 0.00 0.00 4.41
5800 6206 0.457853 TACGATGTCTTCCGCTGCAC 60.458 55.000 0.00 0.00 0.00 4.57
5801 6207 2.456119 CGATGTCTTCCGCTGCACC 61.456 63.158 0.00 0.00 0.00 5.01
5802 6208 1.375908 GATGTCTTCCGCTGCACCA 60.376 57.895 0.00 0.00 0.00 4.17
5803 6209 1.639298 GATGTCTTCCGCTGCACCAC 61.639 60.000 0.00 0.00 0.00 4.16
5804 6210 3.050275 GTCTTCCGCTGCACCACC 61.050 66.667 0.00 0.00 0.00 4.61
5805 6211 3.241530 TCTTCCGCTGCACCACCT 61.242 61.111 0.00 0.00 0.00 4.00
5806 6212 2.743928 CTTCCGCTGCACCACCTC 60.744 66.667 0.00 0.00 0.00 3.85
5807 6213 4.329545 TTCCGCTGCACCACCTCC 62.330 66.667 0.00 0.00 0.00 4.30
5838 6244 4.570663 CCGATCTCGACCGCCACC 62.571 72.222 0.22 0.00 43.02 4.61
5839 6245 4.907034 CGATCTCGACCGCCACCG 62.907 72.222 0.00 0.00 43.02 4.94
5872 6278 4.547367 CCCCGATGTCGCCCTTCC 62.547 72.222 0.00 0.00 38.18 3.46
5873 6279 4.547367 CCCGATGTCGCCCTTCCC 62.547 72.222 0.00 0.00 38.18 3.97
5874 6280 4.891727 CCGATGTCGCCCTTCCCG 62.892 72.222 0.00 0.00 38.18 5.14
5875 6281 4.891727 CGATGTCGCCCTTCCCGG 62.892 72.222 0.00 0.00 0.00 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
351 368 0.034574 ACCAACTGTTGACTGCCACA 60.035 50.000 21.49 0.00 0.00 4.17
462 479 3.795623 AGCACGATACGGTCACTAAAT 57.204 42.857 0.00 0.00 0.00 1.40
569 590 4.753877 TCACGCCGAGCTCGTTCG 62.754 66.667 32.17 32.17 38.19 3.95
635 656 4.868116 ACCCCACCACACACACGC 62.868 66.667 0.00 0.00 0.00 5.34
636 657 2.899838 CACCCCACCACACACACG 60.900 66.667 0.00 0.00 0.00 4.49
637 658 2.518349 CCACCCCACCACACACAC 60.518 66.667 0.00 0.00 0.00 3.82
638 659 3.814906 CCCACCCCACCACACACA 61.815 66.667 0.00 0.00 0.00 3.72
639 660 4.596585 CCCCACCCCACCACACAC 62.597 72.222 0.00 0.00 0.00 3.82
759 1023 3.050275 GTTGCGGGGCAGACAGAC 61.050 66.667 0.00 0.00 40.61 3.51
763 1027 2.494530 TTTTGGTTGCGGGGCAGAC 61.495 57.895 0.00 0.00 40.61 3.51
905 1171 0.110373 GTTGGCTTTTGTCCGTAGCG 60.110 55.000 0.00 0.00 35.77 4.26
922 1188 2.364961 CGGAGGAGGGGAGAGGTT 59.635 66.667 0.00 0.00 0.00 3.50
971 1237 2.359975 GGAGGCCTGGTTCCGTTG 60.360 66.667 12.00 0.00 0.00 4.10
984 1250 0.880278 CCATATGGAACGCACGGAGG 60.880 60.000 17.49 0.00 37.39 4.30
995 1287 1.760613 GGTTCGTGGAGACCATATGGA 59.239 52.381 28.77 1.90 35.28 3.41
998 1290 0.750850 CGGGTTCGTGGAGACCATAT 59.249 55.000 0.00 0.00 35.28 1.78
999 1291 1.952102 GCGGGTTCGTGGAGACCATA 61.952 60.000 0.00 0.00 35.28 2.74
1241 1539 1.686587 GTGGAGAAACACAAAAGGGGG 59.313 52.381 0.00 0.00 40.99 5.40
1346 1668 1.083489 CCAAGCGCGAATGGACTAAA 58.917 50.000 21.88 0.00 39.12 1.85
1384 1708 5.511202 GCCCAAAGATCACAGAAAAATGGAA 60.511 40.000 0.00 0.00 0.00 3.53
1390 1714 2.956132 TGGCCCAAAGATCACAGAAAA 58.044 42.857 0.00 0.00 0.00 2.29
1466 1791 9.150348 GCAAACACTATAGGCACAAAAATAATT 57.850 29.630 4.43 0.00 0.00 1.40
1479 1804 6.109359 AGCTAAGTTCAGCAAACACTATAGG 58.891 40.000 4.43 0.00 44.35 2.57
1509 1834 7.918033 TCATCATCAAACTTTAAACAAGCGAAA 59.082 29.630 0.00 0.00 0.00 3.46
1540 1865 4.985409 GGAACGTCCAAGTGATCTATCATC 59.015 45.833 0.00 0.00 36.40 2.92
1541 1866 4.651503 AGGAACGTCCAAGTGATCTATCAT 59.348 41.667 6.78 0.00 39.61 2.45
1542 1867 4.023980 AGGAACGTCCAAGTGATCTATCA 58.976 43.478 6.78 0.00 39.61 2.15
1543 1868 4.657436 AGGAACGTCCAAGTGATCTATC 57.343 45.455 6.78 0.00 39.61 2.08
1544 1869 4.712337 AGAAGGAACGTCCAAGTGATCTAT 59.288 41.667 6.78 0.00 39.61 1.98
1545 1870 4.082190 CAGAAGGAACGTCCAAGTGATCTA 60.082 45.833 6.78 0.00 39.61 1.98
1546 1871 2.900546 AGAAGGAACGTCCAAGTGATCT 59.099 45.455 6.78 0.00 39.61 2.75
1547 1872 2.996621 CAGAAGGAACGTCCAAGTGATC 59.003 50.000 6.78 0.00 39.61 2.92
1549 1874 1.540363 GCAGAAGGAACGTCCAAGTGA 60.540 52.381 6.78 0.00 39.61 3.41
1552 1877 1.593196 TTGCAGAAGGAACGTCCAAG 58.407 50.000 6.78 0.00 39.61 3.61
1553 1878 2.270352 ATTGCAGAAGGAACGTCCAA 57.730 45.000 6.78 0.00 39.61 3.53
1554 1879 1.879380 CAATTGCAGAAGGAACGTCCA 59.121 47.619 0.00 0.00 39.61 4.02
1555 1880 1.880027 ACAATTGCAGAAGGAACGTCC 59.120 47.619 5.05 0.00 37.62 4.79
1577 1902 5.741510 TGAAAACATGTCTACAAAAACGCAG 59.258 36.000 0.00 0.00 0.00 5.18
1587 1912 5.466728 TGCTCTTCACTGAAAACATGTCTAC 59.533 40.000 0.00 0.00 0.00 2.59
1595 1920 9.248291 TGAAAAATTATGCTCTTCACTGAAAAC 57.752 29.630 0.00 0.00 0.00 2.43
1653 2010 4.468510 TGGGTAATCGAGTTGTAGGAATGT 59.531 41.667 0.00 0.00 0.00 2.71
1680 2037 3.921021 GTCTGAACAGTGAACGTATGAGG 59.079 47.826 0.00 0.00 0.00 3.86
1689 2046 2.437651 TGATGGTGGTCTGAACAGTGAA 59.562 45.455 0.00 0.00 0.00 3.18
1690 2047 2.046292 TGATGGTGGTCTGAACAGTGA 58.954 47.619 0.00 0.00 0.00 3.41
1691 2048 2.549064 TGATGGTGGTCTGAACAGTG 57.451 50.000 0.00 0.00 0.00 3.66
1692 2049 3.795688 AATGATGGTGGTCTGAACAGT 57.204 42.857 0.00 0.00 0.00 3.55
1693 2050 5.649395 ACATAAATGATGGTGGTCTGAACAG 59.351 40.000 0.00 0.00 40.18 3.16
1694 2051 5.569355 ACATAAATGATGGTGGTCTGAACA 58.431 37.500 0.00 0.00 40.18 3.18
1695 2052 6.823689 AGTACATAAATGATGGTGGTCTGAAC 59.176 38.462 0.00 0.00 40.18 3.18
1696 2053 6.957631 AGTACATAAATGATGGTGGTCTGAA 58.042 36.000 0.00 0.00 40.18 3.02
1697 2054 6.560003 AGTACATAAATGATGGTGGTCTGA 57.440 37.500 0.00 0.00 40.18 3.27
1698 2055 7.500992 AGTAGTACATAAATGATGGTGGTCTG 58.499 38.462 2.52 0.00 40.18 3.51
1699 2056 7.202011 GGAGTAGTACATAAATGATGGTGGTCT 60.202 40.741 2.52 0.00 40.18 3.85
1700 2057 6.929606 GGAGTAGTACATAAATGATGGTGGTC 59.070 42.308 2.52 0.00 40.18 4.02
1701 2058 6.183361 GGGAGTAGTACATAAATGATGGTGGT 60.183 42.308 2.52 0.00 40.18 4.16
1702 2059 6.043243 AGGGAGTAGTACATAAATGATGGTGG 59.957 42.308 2.52 0.00 40.18 4.61
1721 2078 5.424252 TCTTATATTTGTGAACGGAGGGAGT 59.576 40.000 0.00 0.00 0.00 3.85
1748 2105 8.882415 TTTAGTCCATATTGAAGTATCCGAAC 57.118 34.615 0.00 0.00 0.00 3.95
1751 2108 7.437267 ACGTTTTAGTCCATATTGAAGTATCCG 59.563 37.037 0.00 0.00 0.00 4.18
1757 2114 7.596749 AGACACGTTTTAGTCCATATTGAAG 57.403 36.000 0.51 0.00 35.38 3.02
1815 2173 6.924060 CCTACTCCTTCCGTTCACAAATATAG 59.076 42.308 0.00 0.00 0.00 1.31
1830 2188 8.768957 ACGAAAACTATTTTACCTACTCCTTC 57.231 34.615 0.00 0.00 31.94 3.46
1979 2359 5.576447 TGAAAAGAACTCAGGTTTTCCAC 57.424 39.130 6.67 0.00 43.73 4.02
1991 2371 4.816385 TCACGATCAAAGCTGAAAAGAACT 59.184 37.500 0.00 0.00 34.49 3.01
2286 2667 3.736126 GCATGGCTCCTTATCTGCAAAAC 60.736 47.826 0.00 0.00 0.00 2.43
2568 2949 1.081892 CAGCCACGTTCATTCCTGAG 58.918 55.000 0.00 0.00 31.68 3.35
2665 3046 7.894364 AGAGTACACTTGGACTATTTAGAGGAA 59.106 37.037 0.00 0.00 0.00 3.36
2680 3063 6.308282 GGATTAACTGACGAAGAGTACACTTG 59.692 42.308 10.46 5.77 0.00 3.16
2717 3100 3.603532 CAGCACCTAAATCTTCTGAGCA 58.396 45.455 0.00 0.00 0.00 4.26
2894 3277 6.116126 ACTAGAACAGAACTGCAAAAGTCTT 58.884 36.000 0.00 0.00 38.56 3.01
2929 3312 3.655486 TCATTCTAAAGAACGAACCGCA 58.345 40.909 0.00 0.00 36.80 5.69
2966 3349 8.843262 CAATGGATGAATGAGCTGTAAGAATTA 58.157 33.333 0.00 0.00 34.07 1.40
2991 3374 7.551262 AGCCACGATAACAATACAGTAAAATCA 59.449 33.333 0.00 0.00 0.00 2.57
3004 3387 3.628032 TGTGACAAAAGCCACGATAACAA 59.372 39.130 0.00 0.00 36.15 2.83
3054 3437 5.544948 GGGGGTTAAAGGAGTTTAAAATGGT 59.455 40.000 0.00 0.00 39.34 3.55
3265 3648 4.938226 CCATAGCCTTAGTTAAGCTATGCC 59.062 45.833 20.34 1.66 41.91 4.40
3502 3887 6.584563 CGACATAACACAAAGGGTTAAAATGG 59.415 38.462 0.00 0.00 34.67 3.16
3513 3898 7.726079 TCGATTAGTTTCGACATAACACAAAG 58.274 34.615 1.62 0.00 42.81 2.77
3588 3973 6.992123 ACACAAATGTCAGTTGATGAGAAGTA 59.008 34.615 19.22 0.00 39.07 2.24
3613 3998 5.221722 ACAACAGTGCCTAGAGATCAAAAGA 60.222 40.000 0.00 0.00 0.00 2.52
3777 4162 8.904099 AAACTACAACAGCTTGACTTATAAGT 57.096 30.769 18.05 18.05 43.16 2.24
3869 4254 4.089361 GACAAGAATTTTGGGATGGAGGT 58.911 43.478 5.68 0.00 0.00 3.85
3908 4293 8.255206 TCATGTTTTAGTGTTAGATACATCCGT 58.745 33.333 0.00 0.00 39.39 4.69
3909 4294 8.642908 TCATGTTTTAGTGTTAGATACATCCG 57.357 34.615 0.00 0.00 39.39 4.18
3921 4306 9.261180 CGGATGTATCTATTCATGTTTTAGTGT 57.739 33.333 0.00 0.00 0.00 3.55
3922 4307 9.261180 ACGGATGTATCTATTCATGTTTTAGTG 57.739 33.333 0.00 0.00 0.00 2.74
3953 4338 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
3954 4339 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
3955 4340 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
3956 4341 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
3957 4342 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
3958 4343 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
3959 4344 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
3960 4345 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
3961 4346 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
3962 4347 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
3963 4348 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
3964 4349 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
3965 4350 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
3966 4351 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
3967 4352 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
3968 4353 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
3969 4354 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
3970 4355 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
3971 4356 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
3972 4357 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
3973 4358 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
3974 4359 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
3975 4360 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
3976 4361 0.396695 GATGTACTCCCTCCGTCCCA 60.397 60.000 0.00 0.00 0.00 4.37
3977 4362 0.106116 AGATGTACTCCCTCCGTCCC 60.106 60.000 0.00 0.00 0.00 4.46
3978 4363 1.033574 CAGATGTACTCCCTCCGTCC 58.966 60.000 0.00 0.00 0.00 4.79
3979 4364 2.054232 TCAGATGTACTCCCTCCGTC 57.946 55.000 0.00 0.00 0.00 4.79
3980 4365 2.526888 TTCAGATGTACTCCCTCCGT 57.473 50.000 0.00 0.00 0.00 4.69
3981 4366 2.101582 CCTTTCAGATGTACTCCCTCCG 59.898 54.545 0.00 0.00 0.00 4.63
3982 4367 3.108376 ACCTTTCAGATGTACTCCCTCC 58.892 50.000 0.00 0.00 0.00 4.30
4009 4394 2.034053 GCGTGAGATAGCTCTGCTACTT 59.966 50.000 9.79 0.00 44.24 2.24
4070 4455 3.394940 TGGTTACCTTGACACCACCATAA 59.605 43.478 2.07 0.00 35.57 1.90
4132 4517 5.998363 AGGAGTTAAACATCTGAAACTGACC 59.002 40.000 0.00 0.00 32.51 4.02
4188 4573 6.318648 TGAAATCCTGCGCAGTTTCTTTATAT 59.681 34.615 34.43 16.63 33.06 0.86
4370 4758 7.698836 AGTTTGCAAAACATGATGACTTTAC 57.301 32.000 14.67 0.00 0.00 2.01
4490 4882 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
4491 4883 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
4492 4884 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
4493 4885 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
4494 4886 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
4495 4887 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
4496 4888 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
4497 4889 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
4498 4890 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
4499 4891 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
4508 4900 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
4509 4901 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
4510 4902 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
4511 4903 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
4512 4904 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
4513 4905 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
4514 4906 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
4515 4907 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
4517 4909 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
4518 4910 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
4519 4911 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
4520 4912 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
4531 4923 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
4532 4924 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
4533 4925 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
4534 4926 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
4535 4927 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
4536 4928 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
4537 4929 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
4538 4930 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
4539 4931 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
4540 4932 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
4541 4933 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
4542 4934 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
4543 4935 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
4544 4936 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
4545 4937 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
4546 4938 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
4547 4939 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
4548 4940 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
4549 4941 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
4550 4942 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
4551 4943 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
4552 4944 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
4553 4945 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
4554 4946 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
4555 4947 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
4556 4948 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
4557 4949 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
4558 4950 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
4559 4951 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
4560 4952 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
4561 4953 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
4562 4954 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
4563 4955 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
4564 4956 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
4566 4958 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
4567 4959 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
4568 4960 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
4569 4961 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
4570 4962 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
4571 4963 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
4572 4964 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
4580 4972 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
4581 4973 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
4582 4974 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
4583 4975 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
4584 4976 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
4585 4977 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
4586 4978 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
4587 4979 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
4588 4980 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
4589 4981 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
4590 4982 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
4591 4983 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
4592 4984 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
4593 4985 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
4594 4986 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
4595 4987 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
4596 4988 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
4597 4989 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
4598 4990 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
4599 4991 0.773644 AAAGGACAGACCCAGTGCAT 59.226 50.000 0.00 0.00 40.05 3.96
4600 4992 0.179020 CAAAGGACAGACCCAGTGCA 60.179 55.000 0.00 0.00 40.05 4.57
4601 4993 0.179018 ACAAAGGACAGACCCAGTGC 60.179 55.000 0.00 0.00 40.05 4.40
4602 4994 3.485463 TTACAAAGGACAGACCCAGTG 57.515 47.619 0.00 0.00 40.05 3.66
4603 4995 4.724279 ATTTACAAAGGACAGACCCAGT 57.276 40.909 0.00 0.00 40.05 4.00
4604 4996 5.805728 ACTATTTACAAAGGACAGACCCAG 58.194 41.667 0.00 0.00 40.05 4.45
4605 4997 5.308497 TGACTATTTACAAAGGACAGACCCA 59.692 40.000 0.00 0.00 40.05 4.51
4606 4998 5.801380 TGACTATTTACAAAGGACAGACCC 58.199 41.667 0.00 0.00 40.05 4.46
4607 4999 6.148976 GGTTGACTATTTACAAAGGACAGACC 59.851 42.308 0.00 0.00 39.35 3.85
4608 5000 6.935208 AGGTTGACTATTTACAAAGGACAGAC 59.065 38.462 0.00 0.00 0.00 3.51
4609 5001 7.074653 AGGTTGACTATTTACAAAGGACAGA 57.925 36.000 0.00 0.00 0.00 3.41
4610 5002 7.745620 AAGGTTGACTATTTACAAAGGACAG 57.254 36.000 0.00 0.00 0.00 3.51
4611 5003 7.776030 TGAAAGGTTGACTATTTACAAAGGACA 59.224 33.333 0.00 0.00 0.00 4.02
4612 5004 8.161699 TGAAAGGTTGACTATTTACAAAGGAC 57.838 34.615 0.00 0.00 0.00 3.85
4613 5005 8.754991 TTGAAAGGTTGACTATTTACAAAGGA 57.245 30.769 0.00 0.00 0.00 3.36
4614 5006 8.082242 CCTTGAAAGGTTGACTATTTACAAAGG 58.918 37.037 0.57 0.00 41.41 3.11
4615 5007 8.082242 CCCTTGAAAGGTTGACTATTTACAAAG 58.918 37.037 8.26 0.00 44.98 2.77
4616 5008 7.780745 TCCCTTGAAAGGTTGACTATTTACAAA 59.219 33.333 8.26 0.00 44.98 2.83
4617 5009 7.291566 TCCCTTGAAAGGTTGACTATTTACAA 58.708 34.615 8.26 0.00 44.98 2.41
4618 5010 6.843752 TCCCTTGAAAGGTTGACTATTTACA 58.156 36.000 8.26 0.00 44.98 2.41
4619 5011 7.754851 TTCCCTTGAAAGGTTGACTATTTAC 57.245 36.000 8.26 0.00 44.98 2.01
4620 5012 8.770010 TTTTCCCTTGAAAGGTTGACTATTTA 57.230 30.769 8.26 0.00 44.98 1.40
4621 5013 7.669089 TTTTCCCTTGAAAGGTTGACTATTT 57.331 32.000 8.26 0.00 44.98 1.40
4622 5014 7.290014 ACATTTTCCCTTGAAAGGTTGACTATT 59.710 33.333 8.26 0.00 44.98 1.73
4623 5015 6.782494 ACATTTTCCCTTGAAAGGTTGACTAT 59.218 34.615 8.26 0.00 44.98 2.12
4624 5016 6.040391 CACATTTTCCCTTGAAAGGTTGACTA 59.960 38.462 8.26 0.00 44.98 2.59
4625 5017 4.962362 ACATTTTCCCTTGAAAGGTTGACT 59.038 37.500 8.26 0.00 44.98 3.41
4626 5018 5.049828 CACATTTTCCCTTGAAAGGTTGAC 58.950 41.667 8.26 0.00 44.98 3.18
4627 5019 4.714308 ACACATTTTCCCTTGAAAGGTTGA 59.286 37.500 8.26 0.00 44.98 3.18
4628 5020 5.022282 ACACATTTTCCCTTGAAAGGTTG 57.978 39.130 8.26 1.33 44.98 3.77
4629 5021 5.692115 AACACATTTTCCCTTGAAAGGTT 57.308 34.783 8.26 0.00 44.98 3.50
4630 5022 5.425217 AGAAACACATTTTCCCTTGAAAGGT 59.575 36.000 8.26 0.00 44.98 3.50
4631 5023 5.917462 AGAAACACATTTTCCCTTGAAAGG 58.083 37.500 1.81 1.81 46.06 3.11
4632 5024 7.848223 AAAGAAACACATTTTCCCTTGAAAG 57.152 32.000 0.00 0.00 41.31 2.62
4633 5025 7.494298 GCTAAAGAAACACATTTTCCCTTGAAA 59.506 33.333 0.00 0.00 38.69 2.69
4651 5043 2.170166 CAGGCCCAACATGCTAAAGAA 58.830 47.619 0.00 0.00 0.00 2.52
4656 5048 1.505151 TTCCCAGGCCCAACATGCTA 61.505 55.000 0.00 0.00 0.00 3.49
4681 5073 9.991906 ATCAGTTCAAATCAGTTCAAATCATTT 57.008 25.926 0.00 0.00 0.00 2.32
4684 5076 9.288576 AGTATCAGTTCAAATCAGTTCAAATCA 57.711 29.630 0.00 0.00 0.00 2.57
4685 5077 9.766277 GAGTATCAGTTCAAATCAGTTCAAATC 57.234 33.333 0.00 0.00 33.17 2.17
4686 5078 9.288576 TGAGTATCAGTTCAAATCAGTTCAAAT 57.711 29.630 0.00 0.00 42.56 2.32
4687 5079 8.675705 TGAGTATCAGTTCAAATCAGTTCAAA 57.324 30.769 0.00 0.00 42.56 2.69
4802 5194 4.199432 AGACAGCAACTTCCTCTGTATG 57.801 45.455 0.00 0.00 40.74 2.39
5025 5417 4.085733 ACCCTATTCAGAGATCGAGATGG 58.914 47.826 0.00 0.00 0.00 3.51
5125 5517 1.065418 AGCCTACTGTACATGGTTGCC 60.065 52.381 0.00 0.00 0.00 4.52
5170 5562 7.361201 CGAGGCAAAAATATATACACATCAGGG 60.361 40.741 0.00 0.00 0.00 4.45
5194 5586 2.159282 GGAGGAAAGATACACGCTTCGA 60.159 50.000 0.00 0.00 0.00 3.71
5230 5622 2.254546 TTGACGGAAGCAACATCTGT 57.745 45.000 0.00 0.00 39.08 3.41
5349 5752 3.380004 TCTTGCCAGACACAAACGAAAAT 59.620 39.130 0.00 0.00 0.00 1.82
5376 5781 4.611943 CTTATGTCATAGTCACACGGGAG 58.388 47.826 0.00 0.00 0.00 4.30
5388 5793 9.657419 CACATGGAGTATTATGCTTATGTCATA 57.343 33.333 9.69 0.00 0.00 2.15
5412 5818 4.558538 AGCAATTCTCAACAGACAACAC 57.441 40.909 0.00 0.00 0.00 3.32
5415 5821 5.357878 ACTGAAAGCAATTCTCAACAGACAA 59.642 36.000 0.00 0.00 38.92 3.18
5448 5854 4.046286 ACCCCAACTGAATTGCTTATGA 57.954 40.909 0.00 0.00 36.93 2.15
5487 5893 1.199097 ACACGAATCCATGCCGAAAAC 59.801 47.619 0.00 0.00 0.00 2.43
5491 5897 1.083489 GAAACACGAATCCATGCCGA 58.917 50.000 0.00 0.00 0.00 5.54
5493 5899 1.812571 ACAGAAACACGAATCCATGCC 59.187 47.619 0.00 0.00 0.00 4.40
5555 5961 1.734477 CACGAGTCACCTTCTGGCG 60.734 63.158 0.00 0.00 36.63 5.69
5556 5962 2.029844 GCACGAGTCACCTTCTGGC 61.030 63.158 0.00 0.00 36.63 4.85
5558 5964 1.800805 AATGCACGAGTCACCTTCTG 58.199 50.000 0.00 0.00 0.00 3.02
5570 5976 7.795431 ACATAACTTAAATGACAAATGCACG 57.205 32.000 0.00 0.00 0.00 5.34
5591 5997 3.428870 CGCTGTGTTCTTTCTCGTTACAT 59.571 43.478 0.00 0.00 0.00 2.29
5597 6003 1.192534 GGTTCGCTGTGTTCTTTCTCG 59.807 52.381 0.00 0.00 0.00 4.04
5637 6043 9.605275 ACAAGACTACGTATATACAGTCTAACA 57.395 33.333 25.08 6.67 45.33 2.41
5643 6049 9.160496 GCCTATACAAGACTACGTATATACAGT 57.840 37.037 13.22 9.28 31.82 3.55
5644 6050 8.610896 GGCCTATACAAGACTACGTATATACAG 58.389 40.741 13.22 6.23 31.82 2.74
5645 6051 8.324306 AGGCCTATACAAGACTACGTATATACA 58.676 37.037 1.29 0.00 31.82 2.29
5646 6052 8.729805 AGGCCTATACAAGACTACGTATATAC 57.270 38.462 1.29 2.53 31.82 1.47
5647 6053 9.170734 CAAGGCCTATACAAGACTACGTATATA 57.829 37.037 5.16 0.00 31.82 0.86
5648 6054 7.668886 ACAAGGCCTATACAAGACTACGTATAT 59.331 37.037 5.16 0.00 31.82 0.86
5649 6055 7.000472 ACAAGGCCTATACAAGACTACGTATA 59.000 38.462 5.16 5.16 31.02 1.47
5650 6056 5.832060 ACAAGGCCTATACAAGACTACGTAT 59.168 40.000 5.16 3.65 33.08 3.06
5651 6057 5.195940 ACAAGGCCTATACAAGACTACGTA 58.804 41.667 5.16 0.00 0.00 3.57
5652 6058 4.021916 ACAAGGCCTATACAAGACTACGT 58.978 43.478 5.16 0.00 0.00 3.57
5653 6059 4.650754 ACAAGGCCTATACAAGACTACG 57.349 45.455 5.16 0.00 0.00 3.51
5656 6062 8.813951 GGTATAATACAAGGCCTATACAAGACT 58.186 37.037 18.48 0.00 31.59 3.24
5657 6063 8.813951 AGGTATAATACAAGGCCTATACAAGAC 58.186 37.037 18.48 8.94 31.59 3.01
5658 6064 8.967779 AGGTATAATACAAGGCCTATACAAGA 57.032 34.615 18.48 0.00 31.59 3.02
5659 6065 9.036980 AGAGGTATAATACAAGGCCTATACAAG 57.963 37.037 18.48 4.19 31.59 3.16
5660 6066 8.967779 AGAGGTATAATACAAGGCCTATACAA 57.032 34.615 18.48 3.85 31.59 2.41
5661 6067 8.812972 CAAGAGGTATAATACAAGGCCTATACA 58.187 37.037 18.48 1.82 31.59 2.29
5662 6068 8.258708 CCAAGAGGTATAATACAAGGCCTATAC 58.741 40.741 5.16 9.23 0.00 1.47
5663 6069 8.375493 CCAAGAGGTATAATACAAGGCCTATA 57.625 38.462 5.16 1.53 0.00 1.31
5664 6070 7.259088 CCAAGAGGTATAATACAAGGCCTAT 57.741 40.000 5.16 0.00 0.00 2.57
5665 6071 6.681729 CCAAGAGGTATAATACAAGGCCTA 57.318 41.667 5.16 0.00 0.00 3.93
5666 6072 5.568620 CCAAGAGGTATAATACAAGGCCT 57.431 43.478 0.00 0.00 0.00 5.19
5681 6087 8.563123 TCTCATTATATAGACGTACCAAGAGG 57.437 38.462 0.00 0.00 42.21 3.69
5684 6090 9.938670 GCTATCTCATTATATAGACGTACCAAG 57.061 37.037 0.00 0.00 0.00 3.61
5685 6091 8.900781 GGCTATCTCATTATATAGACGTACCAA 58.099 37.037 0.00 0.00 0.00 3.67
5686 6092 8.050930 TGGCTATCTCATTATATAGACGTACCA 58.949 37.037 0.00 0.00 36.63 3.25
5687 6093 8.344098 GTGGCTATCTCATTATATAGACGTACC 58.656 40.741 0.00 0.00 36.63 3.34
5688 6094 8.890718 TGTGGCTATCTCATTATATAGACGTAC 58.109 37.037 0.00 0.00 36.63 3.67
5689 6095 8.890718 GTGTGGCTATCTCATTATATAGACGTA 58.109 37.037 0.00 0.00 36.63 3.57
5690 6096 7.148052 GGTGTGGCTATCTCATTATATAGACGT 60.148 40.741 0.00 0.00 36.63 4.34
5691 6097 7.197017 GGTGTGGCTATCTCATTATATAGACG 58.803 42.308 0.00 0.00 36.63 4.18
5692 6098 7.343316 AGGGTGTGGCTATCTCATTATATAGAC 59.657 40.741 0.00 0.00 34.76 2.59
5693 6099 7.343057 CAGGGTGTGGCTATCTCATTATATAGA 59.657 40.741 0.00 0.00 0.00 1.98
5694 6100 7.124901 ACAGGGTGTGGCTATCTCATTATATAG 59.875 40.741 0.00 0.00 0.00 1.31
5695 6101 6.959954 ACAGGGTGTGGCTATCTCATTATATA 59.040 38.462 0.00 0.00 0.00 0.86
5696 6102 5.787494 ACAGGGTGTGGCTATCTCATTATAT 59.213 40.000 0.00 0.00 0.00 0.86
5697 6103 5.155161 ACAGGGTGTGGCTATCTCATTATA 58.845 41.667 0.00 0.00 0.00 0.98
5698 6104 3.976654 ACAGGGTGTGGCTATCTCATTAT 59.023 43.478 0.00 0.00 0.00 1.28
5699 6105 3.384168 ACAGGGTGTGGCTATCTCATTA 58.616 45.455 0.00 0.00 0.00 1.90
5700 6106 2.200081 ACAGGGTGTGGCTATCTCATT 58.800 47.619 0.00 0.00 0.00 2.57
5701 6107 1.885049 ACAGGGTGTGGCTATCTCAT 58.115 50.000 0.00 0.00 0.00 2.90
5702 6108 1.656587 AACAGGGTGTGGCTATCTCA 58.343 50.000 0.00 0.00 0.00 3.27
5703 6109 2.789409 AAACAGGGTGTGGCTATCTC 57.211 50.000 0.00 0.00 0.00 2.75
5704 6110 3.054361 CCTAAAACAGGGTGTGGCTATCT 60.054 47.826 0.00 0.00 41.26 1.98
5705 6111 3.279434 CCTAAAACAGGGTGTGGCTATC 58.721 50.000 0.00 0.00 41.26 2.08
5706 6112 3.366052 CCTAAAACAGGGTGTGGCTAT 57.634 47.619 0.00 0.00 41.26 2.97
5707 6113 2.871096 CCTAAAACAGGGTGTGGCTA 57.129 50.000 0.00 0.00 41.26 3.93
5708 6114 3.745723 CCTAAAACAGGGTGTGGCT 57.254 52.632 0.00 0.00 41.26 4.75
5716 6122 1.439679 GCTCGACACCCTAAAACAGG 58.560 55.000 0.00 0.00 45.07 4.00
5717 6123 1.270625 TGGCTCGACACCCTAAAACAG 60.271 52.381 0.00 0.00 0.00 3.16
5718 6124 0.759959 TGGCTCGACACCCTAAAACA 59.240 50.000 0.00 0.00 0.00 2.83
5719 6125 1.270678 ACTGGCTCGACACCCTAAAAC 60.271 52.381 0.00 0.00 0.00 2.43
5720 6126 1.053424 ACTGGCTCGACACCCTAAAA 58.947 50.000 0.00 0.00 0.00 1.52
5721 6127 1.053424 AACTGGCTCGACACCCTAAA 58.947 50.000 0.00 0.00 0.00 1.85
5722 6128 1.001633 GAAACTGGCTCGACACCCTAA 59.998 52.381 0.00 0.00 0.00 2.69
5723 6129 0.606604 GAAACTGGCTCGACACCCTA 59.393 55.000 0.00 0.00 0.00 3.53
5724 6130 1.371558 GAAACTGGCTCGACACCCT 59.628 57.895 0.00 0.00 0.00 4.34
5725 6131 1.671379 GGAAACTGGCTCGACACCC 60.671 63.158 0.00 0.00 0.00 4.61
5726 6132 1.671379 GGGAAACTGGCTCGACACC 60.671 63.158 0.00 0.00 0.00 4.16
5727 6133 0.534203 TTGGGAAACTGGCTCGACAC 60.534 55.000 0.00 0.00 0.00 3.67
5728 6134 0.181587 TTTGGGAAACTGGCTCGACA 59.818 50.000 0.00 0.00 0.00 4.35
5729 6135 0.591659 GTTTGGGAAACTGGCTCGAC 59.408 55.000 0.00 0.00 38.35 4.20
5730 6136 0.536460 GGTTTGGGAAACTGGCTCGA 60.536 55.000 0.00 0.00 41.14 4.04
5731 6137 0.821711 TGGTTTGGGAAACTGGCTCG 60.822 55.000 0.00 0.00 41.14 5.03
5732 6138 0.673985 GTGGTTTGGGAAACTGGCTC 59.326 55.000 0.00 0.00 41.14 4.70
5733 6139 0.759060 GGTGGTTTGGGAAACTGGCT 60.759 55.000 0.00 0.00 41.14 4.75
5734 6140 1.745890 GGTGGTTTGGGAAACTGGC 59.254 57.895 0.00 0.00 41.14 4.85
5735 6141 0.105709 AGGGTGGTTTGGGAAACTGG 60.106 55.000 0.00 0.00 41.14 4.00
5736 6142 2.668144 TAGGGTGGTTTGGGAAACTG 57.332 50.000 0.00 0.00 41.14 3.16
5737 6143 2.449345 ACATAGGGTGGTTTGGGAAACT 59.551 45.455 0.00 0.00 41.14 2.66
5738 6144 2.884320 ACATAGGGTGGTTTGGGAAAC 58.116 47.619 0.00 0.00 40.65 2.78
5739 6145 3.621682 AACATAGGGTGGTTTGGGAAA 57.378 42.857 0.00 0.00 0.00 3.13
5740 6146 3.621682 AAACATAGGGTGGTTTGGGAA 57.378 42.857 0.00 0.00 32.57 3.97
5741 6147 3.621682 AAAACATAGGGTGGTTTGGGA 57.378 42.857 0.00 0.00 45.77 4.37
5742 6148 4.153411 TGTAAAACATAGGGTGGTTTGGG 58.847 43.478 1.58 0.00 46.84 4.12
5743 6149 5.337169 CCATGTAAAACATAGGGTGGTTTGG 60.337 44.000 1.58 0.00 46.84 3.28
5744 6150 5.245075 ACCATGTAAAACATAGGGTGGTTTG 59.755 40.000 1.58 0.00 46.84 2.93
5746 6152 5.005628 ACCATGTAAAACATAGGGTGGTT 57.994 39.130 2.27 0.00 40.18 3.67
5747 6153 4.668138 ACCATGTAAAACATAGGGTGGT 57.332 40.909 2.27 0.17 36.53 4.16
5748 6154 6.361433 TGATACCATGTAAAACATAGGGTGG 58.639 40.000 10.67 4.35 36.53 4.61
5749 6155 7.054124 ACTGATACCATGTAAAACATAGGGTG 58.946 38.462 10.67 0.33 36.53 4.61
5750 6156 7.208064 ACTGATACCATGTAAAACATAGGGT 57.792 36.000 7.10 7.10 36.53 4.34
5751 6157 8.519799 AAACTGATACCATGTAAAACATAGGG 57.480 34.615 10.93 4.86 36.53 3.53
5755 6161 9.528489 AACCTAAACTGATACCATGTAAAACAT 57.472 29.630 0.00 0.00 39.91 2.71
5756 6162 8.927675 AACCTAAACTGATACCATGTAAAACA 57.072 30.769 0.00 0.00 0.00 2.83
5758 6164 9.153721 CGTAACCTAAACTGATACCATGTAAAA 57.846 33.333 0.00 0.00 0.00 1.52
5759 6165 8.530311 TCGTAACCTAAACTGATACCATGTAAA 58.470 33.333 0.00 0.00 0.00 2.01
5760 6166 8.065473 TCGTAACCTAAACTGATACCATGTAA 57.935 34.615 0.00 0.00 0.00 2.41
5761 6167 7.643569 TCGTAACCTAAACTGATACCATGTA 57.356 36.000 0.00 0.00 0.00 2.29
5762 6168 6.534475 TCGTAACCTAAACTGATACCATGT 57.466 37.500 0.00 0.00 0.00 3.21
5763 6169 6.984474 ACATCGTAACCTAAACTGATACCATG 59.016 38.462 0.00 0.00 0.00 3.66
5764 6170 7.069578 AGACATCGTAACCTAAACTGATACCAT 59.930 37.037 0.00 0.00 0.00 3.55
5765 6171 6.379133 AGACATCGTAACCTAAACTGATACCA 59.621 38.462 0.00 0.00 0.00 3.25
5766 6172 6.803642 AGACATCGTAACCTAAACTGATACC 58.196 40.000 0.00 0.00 0.00 2.73
5767 6173 7.434602 GGAAGACATCGTAACCTAAACTGATAC 59.565 40.741 0.00 0.00 0.00 2.24
5768 6174 7.486647 GGAAGACATCGTAACCTAAACTGATA 58.513 38.462 0.00 0.00 0.00 2.15
5769 6175 6.338937 GGAAGACATCGTAACCTAAACTGAT 58.661 40.000 0.00 0.00 0.00 2.90
5770 6176 5.620654 CGGAAGACATCGTAACCTAAACTGA 60.621 44.000 0.00 0.00 0.00 3.41
5771 6177 4.561606 CGGAAGACATCGTAACCTAAACTG 59.438 45.833 0.00 0.00 0.00 3.16
5772 6178 4.741342 CGGAAGACATCGTAACCTAAACT 58.259 43.478 0.00 0.00 0.00 2.66
5773 6179 3.305361 GCGGAAGACATCGTAACCTAAAC 59.695 47.826 0.00 0.00 0.00 2.01
5774 6180 3.194116 AGCGGAAGACATCGTAACCTAAA 59.806 43.478 0.00 0.00 0.00 1.85
5775 6181 2.756760 AGCGGAAGACATCGTAACCTAA 59.243 45.455 0.00 0.00 0.00 2.69
5776 6182 2.098607 CAGCGGAAGACATCGTAACCTA 59.901 50.000 0.00 0.00 0.00 3.08
5777 6183 1.135083 CAGCGGAAGACATCGTAACCT 60.135 52.381 0.00 0.00 0.00 3.50
5778 6184 1.278238 CAGCGGAAGACATCGTAACC 58.722 55.000 0.00 0.00 0.00 2.85
5779 6185 0.645868 GCAGCGGAAGACATCGTAAC 59.354 55.000 0.00 0.00 0.00 2.50
5780 6186 0.245266 TGCAGCGGAAGACATCGTAA 59.755 50.000 0.00 0.00 0.00 3.18
5781 6187 0.457853 GTGCAGCGGAAGACATCGTA 60.458 55.000 0.00 0.00 0.00 3.43
5782 6188 1.738099 GTGCAGCGGAAGACATCGT 60.738 57.895 0.00 0.00 0.00 3.73
5783 6189 2.456119 GGTGCAGCGGAAGACATCG 61.456 63.158 0.00 0.00 0.00 3.84
5784 6190 1.375908 TGGTGCAGCGGAAGACATC 60.376 57.895 11.91 0.00 0.00 3.06
5785 6191 1.672356 GTGGTGCAGCGGAAGACAT 60.672 57.895 11.91 0.00 0.00 3.06
5786 6192 2.280797 GTGGTGCAGCGGAAGACA 60.281 61.111 11.91 0.00 0.00 3.41
5787 6193 3.050275 GGTGGTGCAGCGGAAGAC 61.050 66.667 11.91 2.97 0.00 3.01
5788 6194 3.240134 GAGGTGGTGCAGCGGAAGA 62.240 63.158 11.91 0.00 36.92 2.87
5789 6195 2.743928 GAGGTGGTGCAGCGGAAG 60.744 66.667 11.91 0.00 36.92 3.46
5790 6196 4.329545 GGAGGTGGTGCAGCGGAA 62.330 66.667 11.91 0.00 36.92 4.30
5821 6227 4.570663 GGTGGCGGTCGAGATCGG 62.571 72.222 7.90 0.00 40.29 4.18
5822 6228 4.907034 CGGTGGCGGTCGAGATCG 62.907 72.222 0.79 0.79 41.45 3.69
5855 6261 4.547367 GGAAGGGCGACATCGGGG 62.547 72.222 3.08 0.00 40.23 5.73
5856 6262 4.547367 GGGAAGGGCGACATCGGG 62.547 72.222 3.08 0.00 40.23 5.14
5857 6263 4.891727 CGGGAAGGGCGACATCGG 62.892 72.222 3.08 0.00 40.23 4.18
5858 6264 4.891727 CCGGGAAGGGCGACATCG 62.892 72.222 0.00 0.00 43.27 3.84
5887 6293 3.039588 ACCGTACGTTGCCGCAAG 61.040 61.111 15.21 3.66 37.70 4.01
5888 6294 3.339464 CACCGTACGTTGCCGCAA 61.339 61.111 15.21 0.38 37.70 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.