Multiple sequence alignment - TraesCS6B01G266000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G266000 chr6B 100.000 5496 0 0 1 5496 478464550 478470045 0.000000e+00 10150.0
1 TraesCS6B01G266000 chr6B 86.259 735 73 12 3026 3755 53602150 53602861 0.000000e+00 773.0
2 TraesCS6B01G266000 chr6B 90.816 98 9 0 4395 4492 478468881 478468978 1.240000e-26 132.0
3 TraesCS6B01G266000 chr6B 90.816 98 9 0 4332 4429 478468944 478469041 1.240000e-26 132.0
4 TraesCS6B01G266000 chr6D 94.858 2956 83 32 1620 4523 310395984 310398922 0.000000e+00 4553.0
5 TraesCS6B01G266000 chr6D 87.822 1010 38 40 675 1618 310394911 310395901 0.000000e+00 1105.0
6 TraesCS6B01G266000 chr6D 88.062 645 47 15 31 653 310394286 310394922 0.000000e+00 737.0
7 TraesCS6B01G266000 chr6D 92.308 533 19 5 4332 4845 310398818 310399347 0.000000e+00 737.0
8 TraesCS6B01G266000 chr6D 95.349 258 7 3 5241 5496 310399344 310399598 6.630000e-109 405.0
9 TraesCS6B01G266000 chr6D 94.872 195 10 0 4298 4492 310398721 310398915 6.920000e-79 305.0
10 TraesCS6B01G266000 chr6D 92.547 161 12 0 4277 4437 310398865 310399025 1.190000e-56 231.0
11 TraesCS6B01G266000 chr6D 95.946 74 3 0 4332 4405 310398881 310398954 2.690000e-23 121.0
12 TraesCS6B01G266000 chr6A 96.086 1712 49 5 1668 3369 446779037 446780740 0.000000e+00 2774.0
13 TraesCS6B01G266000 chr6A 97.397 999 20 4 3411 4405 446780739 446781735 0.000000e+00 1696.0
14 TraesCS6B01G266000 chr6A 92.226 566 23 4 4298 4845 446781667 446782229 0.000000e+00 782.0
15 TraesCS6B01G266000 chr6A 85.759 639 49 22 1 626 446777213 446777822 6.000000e-179 638.0
16 TraesCS6B01G266000 chr6A 87.586 580 32 17 788 1347 446778300 446778859 2.160000e-178 636.0
17 TraesCS6B01G266000 chr6A 93.701 254 13 1 5241 5491 446782226 446782479 1.450000e-100 377.0
18 TraesCS6B01G266000 chr6A 93.168 161 11 0 4277 4437 446781748 446781908 2.560000e-58 237.0
19 TraesCS6B01G266000 chr6A 90.476 84 8 0 4409 4492 446781715 446781798 1.620000e-20 111.0
20 TraesCS6B01G266000 chrUn 83.140 2159 283 49 1771 3877 24919175 24917046 0.000000e+00 1895.0
21 TraesCS6B01G266000 chrUn 90.278 432 42 0 3904 4335 24916927 24916496 2.870000e-157 566.0
22 TraesCS6B01G266000 chr2B 83.071 2162 270 53 1771 3877 53701536 53699416 0.000000e+00 1877.0
23 TraesCS6B01G266000 chr2B 90.047 422 41 1 3914 4335 53699284 53698864 3.740000e-151 545.0
24 TraesCS6B01G266000 chr2B 81.096 529 87 11 1969 2492 549308873 549308353 1.420000e-110 411.0
25 TraesCS6B01G266000 chr2B 79.179 341 70 1 3940 4279 549306615 549306275 9.200000e-58 235.0
26 TraesCS6B01G266000 chr2B 100.000 32 0 0 3792 3823 53905843 53905812 5.950000e-05 60.2
27 TraesCS6B01G266000 chr7D 88.435 735 61 9 3026 3755 564574738 564574023 0.000000e+00 865.0
28 TraesCS6B01G266000 chr7D 79.310 232 33 10 2242 2469 415683007 415682787 1.230000e-31 148.0
29 TraesCS6B01G266000 chr7B 88.027 735 65 6 3026 3755 285344734 285344018 0.000000e+00 848.0
30 TraesCS6B01G266000 chr7B 79.221 231 36 7 2242 2469 429267925 429267704 3.430000e-32 150.0
31 TraesCS6B01G266000 chr3B 86.388 742 70 10 3026 3755 17900195 17899473 0.000000e+00 782.0
32 TraesCS6B01G266000 chr3B 85.714 742 71 12 3026 3755 17884222 17883504 0.000000e+00 750.0
33 TraesCS6B01G266000 chr3D 88.742 604 59 6 3102 3700 554225782 554225183 0.000000e+00 730.0
34 TraesCS6B01G266000 chr3D 87.417 604 66 7 3102 3700 554179574 554178976 0.000000e+00 686.0
35 TraesCS6B01G266000 chr7A 88.294 504 38 10 3257 3755 595995354 595995841 7.930000e-163 584.0
36 TraesCS6B01G266000 chr2D 82.490 514 79 9 1969 2475 470389481 470388972 1.820000e-119 440.0
37 TraesCS6B01G266000 chr2D 79.573 328 67 0 3952 4279 470387267 470386940 9.200000e-58 235.0
38 TraesCS6B01G266000 chr2A 82.157 510 82 7 1969 2475 612084916 612084413 3.930000e-116 429.0
39 TraesCS6B01G266000 chr2A 85.135 74 9 2 5423 5496 281755143 281755214 2.120000e-09 75.0
40 TraesCS6B01G266000 chr4D 91.250 80 6 1 5417 5496 294346471 294346393 2.090000e-19 108.0
41 TraesCS6B01G266000 chr4B 90.000 80 7 1 5417 5496 362144232 362144154 9.740000e-18 102.0
42 TraesCS6B01G266000 chr5D 87.838 74 8 1 5423 5496 267617441 267617513 9.810000e-13 86.1
43 TraesCS6B01G266000 chr5A 86.301 73 9 1 5423 5495 689702688 689702759 1.640000e-10 78.7
44 TraesCS6B01G266000 chr5A 92.308 52 4 0 5423 5474 354964053 354964104 2.120000e-09 75.0
45 TraesCS6B01G266000 chr5B 92.308 52 4 0 5423 5474 302063658 302063709 2.120000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G266000 chr6B 478464550 478470045 5495 False 3471.333333 10150 93.877333 1 5496 3 chr6B.!!$F2 5495
1 TraesCS6B01G266000 chr6B 53602150 53602861 711 False 773.000000 773 86.259000 3026 3755 1 chr6B.!!$F1 729
2 TraesCS6B01G266000 chr6D 310394286 310399598 5312 False 1024.250000 4553 92.720500 31 5496 8 chr6D.!!$F1 5465
3 TraesCS6B01G266000 chr6A 446777213 446782479 5266 False 906.375000 2774 92.049875 1 5491 8 chr6A.!!$F1 5490
4 TraesCS6B01G266000 chrUn 24916496 24919175 2679 True 1230.500000 1895 86.709000 1771 4335 2 chrUn.!!$R1 2564
5 TraesCS6B01G266000 chr2B 53698864 53701536 2672 True 1211.000000 1877 86.559000 1771 4335 2 chr2B.!!$R2 2564
6 TraesCS6B01G266000 chr2B 549306275 549308873 2598 True 323.000000 411 80.137500 1969 4279 2 chr2B.!!$R3 2310
7 TraesCS6B01G266000 chr7D 564574023 564574738 715 True 865.000000 865 88.435000 3026 3755 1 chr7D.!!$R2 729
8 TraesCS6B01G266000 chr7B 285344018 285344734 716 True 848.000000 848 88.027000 3026 3755 1 chr7B.!!$R1 729
9 TraesCS6B01G266000 chr3B 17899473 17900195 722 True 782.000000 782 86.388000 3026 3755 1 chr3B.!!$R2 729
10 TraesCS6B01G266000 chr3B 17883504 17884222 718 True 750.000000 750 85.714000 3026 3755 1 chr3B.!!$R1 729
11 TraesCS6B01G266000 chr3D 554225183 554225782 599 True 730.000000 730 88.742000 3102 3700 1 chr3D.!!$R2 598
12 TraesCS6B01G266000 chr3D 554178976 554179574 598 True 686.000000 686 87.417000 3102 3700 1 chr3D.!!$R1 598
13 TraesCS6B01G266000 chr2D 470386940 470389481 2541 True 337.500000 440 81.031500 1969 4279 2 chr2D.!!$R1 2310
14 TraesCS6B01G266000 chr2A 612084413 612084916 503 True 429.000000 429 82.157000 1969 2475 1 chr2A.!!$R1 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
430 442 0.108804 GCTCTCGTTTCCGTCCATGA 60.109 55.000 0.0 0.0 35.01 3.07 F
693 713 0.614415 AGAGACAGGACAGGAGCTGG 60.614 60.000 0.0 0.0 35.51 4.85 F
920 1343 1.302511 GTTTTCAGGAGGCAGCGGA 60.303 57.895 0.0 0.0 0.00 5.54 F
2267 2855 1.741770 GCGCGACCTCTTCACCATT 60.742 57.895 12.1 0.0 0.00 3.16 F
2887 3638 3.930634 AACAATGGAAGAAAGAGCAGC 57.069 42.857 0.0 0.0 0.00 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2267 2855 2.614969 AGCTGGAGGATGCCCCAA 60.615 61.111 0.00 0.00 37.41 4.12 R
2644 3361 7.870588 GAAGAACATTGTCTTCGTACTACTT 57.129 36.000 10.92 0.00 42.97 2.24 R
2709 3426 2.032550 GGCCATGACAATTGATCGAGTG 59.967 50.000 13.59 8.86 0.00 3.51 R
3143 3898 0.855349 CTTGCCTTATAGCTGCGACG 59.145 55.000 0.00 0.00 0.00 5.12 R
4872 6329 0.251341 ACCTTCAGGCGAGGCAAATT 60.251 50.000 0.00 0.00 37.84 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 3.402628 TGCGAAGGCCTCCTTATATTC 57.597 47.619 5.23 0.00 44.82 1.75
299 310 1.524621 CTCTTGTAGCCGGCCATGG 60.525 63.158 26.15 7.63 0.00 3.66
353 365 0.173708 GTTGGACGCCTAGAGGTCAG 59.826 60.000 13.05 0.00 37.57 3.51
378 390 6.155221 GGCCTTTTCTCCCTTCTTATTTTGAT 59.845 38.462 0.00 0.00 0.00 2.57
379 391 7.261325 GCCTTTTCTCCCTTCTTATTTTGATC 58.739 38.462 0.00 0.00 0.00 2.92
380 392 7.631594 GCCTTTTCTCCCTTCTTATTTTGATCC 60.632 40.741 0.00 0.00 0.00 3.36
381 393 7.147828 CCTTTTCTCCCTTCTTATTTTGATCCC 60.148 40.741 0.00 0.00 0.00 3.85
383 395 5.046522 TCTCCCTTCTTATTTTGATCCCCT 58.953 41.667 0.00 0.00 0.00 4.79
384 396 5.103940 TCTCCCTTCTTATTTTGATCCCCTG 60.104 44.000 0.00 0.00 0.00 4.45
385 397 4.544152 TCCCTTCTTATTTTGATCCCCTGT 59.456 41.667 0.00 0.00 0.00 4.00
386 398 4.646492 CCCTTCTTATTTTGATCCCCTGTG 59.354 45.833 0.00 0.00 0.00 3.66
387 399 4.646492 CCTTCTTATTTTGATCCCCTGTGG 59.354 45.833 0.00 0.00 0.00 4.17
400 412 2.465813 CCCTGTGGAGTCTGAATCTCT 58.534 52.381 5.02 0.00 33.06 3.10
427 439 1.798234 TTCGCTCTCGTTTCCGTCCA 61.798 55.000 0.00 0.00 36.96 4.02
430 442 0.108804 GCTCTCGTTTCCGTCCATGA 60.109 55.000 0.00 0.00 35.01 3.07
482 494 1.339727 GCCCGTGGTTTAGGTCTTGAT 60.340 52.381 0.00 0.00 0.00 2.57
483 495 2.356135 CCCGTGGTTTAGGTCTTGATG 58.644 52.381 0.00 0.00 0.00 3.07
486 498 3.684788 CCGTGGTTTAGGTCTTGATGAAG 59.315 47.826 0.00 0.00 0.00 3.02
497 509 1.253800 CTTGATGAAGATCGCGTCGTG 59.746 52.381 5.77 0.00 0.00 4.35
499 511 0.840729 GATGAAGATCGCGTCGTGTC 59.159 55.000 5.77 3.28 0.00 3.67
514 527 4.208460 CGTCGTGTCTTGTGTCTTTAACAT 59.792 41.667 0.00 0.00 40.80 2.71
515 528 5.432157 GTCGTGTCTTGTGTCTTTAACATG 58.568 41.667 0.00 0.00 40.80 3.21
517 530 5.813157 TCGTGTCTTGTGTCTTTAACATGAA 59.187 36.000 0.00 0.00 40.80 2.57
518 531 6.481976 TCGTGTCTTGTGTCTTTAACATGAAT 59.518 34.615 0.00 0.00 40.80 2.57
519 532 6.574832 CGTGTCTTGTGTCTTTAACATGAATG 59.425 38.462 0.00 0.00 40.80 2.67
522 535 9.500785 TGTCTTGTGTCTTTAACATGAATGATA 57.499 29.630 0.00 0.00 40.80 2.15
523 536 9.979270 GTCTTGTGTCTTTAACATGAATGATAG 57.021 33.333 0.00 0.00 40.80 2.08
524 537 9.942850 TCTTGTGTCTTTAACATGAATGATAGA 57.057 29.630 0.00 0.00 40.80 1.98
550 568 7.724490 ATAGGAGTAATCTGCATAGCACATA 57.276 36.000 0.00 0.00 33.79 2.29
579 599 2.801699 CGTGTGTGTAGTGAAGGCTCAA 60.802 50.000 0.00 0.00 31.88 3.02
635 655 4.590918 GACGAGGACATGATAGGGATAGA 58.409 47.826 0.00 0.00 0.00 1.98
653 673 2.125753 GCCGCAGAGACAGGACAG 60.126 66.667 0.00 0.00 0.00 3.51
655 675 1.979155 CCGCAGAGACAGGACAGGA 60.979 63.158 0.00 0.00 0.00 3.86
656 676 1.510383 CGCAGAGACAGGACAGGAG 59.490 63.158 0.00 0.00 0.00 3.69
657 677 1.217779 GCAGAGACAGGACAGGAGC 59.782 63.158 0.00 0.00 0.00 4.70
658 678 1.257055 GCAGAGACAGGACAGGAGCT 61.257 60.000 0.00 0.00 0.00 4.09
659 679 1.957591 GCAGAGACAGGACAGGAGCTA 60.958 57.143 0.00 0.00 0.00 3.32
660 680 1.748493 CAGAGACAGGACAGGAGCTAC 59.252 57.143 0.00 0.00 0.00 3.58
661 681 1.107945 GAGACAGGACAGGAGCTACC 58.892 60.000 0.00 0.00 39.35 3.18
693 713 0.614415 AGAGACAGGACAGGAGCTGG 60.614 60.000 0.00 0.00 35.51 4.85
694 714 2.237534 GAGACAGGACAGGAGCTGGC 62.238 65.000 0.00 0.00 39.10 4.85
714 734 2.598589 CAGCACAAATCCAAATGGTCG 58.401 47.619 0.00 0.00 36.34 4.79
788 819 3.374402 CTGACCGCGTCCTGTCCT 61.374 66.667 4.92 0.00 0.00 3.85
789 820 3.633094 CTGACCGCGTCCTGTCCTG 62.633 68.421 4.92 0.00 0.00 3.86
790 821 4.436998 GACCGCGTCCTGTCCTGG 62.437 72.222 4.92 0.00 0.00 4.45
795 826 3.636231 CGTCCTGTCCTGGCCCAA 61.636 66.667 0.00 0.00 0.00 4.12
836 1213 2.560119 CCTCCTCCTGAGCGATCGG 61.560 68.421 18.30 1.51 39.98 4.18
837 1214 2.519541 TCCTCCTGAGCGATCGGG 60.520 66.667 22.82 22.82 37.50 5.14
888 1272 2.283529 ACGGGCTCACTCCATTCGT 61.284 57.895 0.00 0.00 0.00 3.85
889 1273 1.519455 CGGGCTCACTCCATTCGTC 60.519 63.158 0.00 0.00 0.00 4.20
920 1343 1.302511 GTTTTCAGGAGGCAGCGGA 60.303 57.895 0.00 0.00 0.00 5.54
1221 1645 2.554370 TGTTTAGGGAAGAACCACCG 57.446 50.000 0.00 0.00 41.20 4.94
1347 1774 4.439253 AGGTAAGCTCACAACCTTCTTT 57.561 40.909 4.62 0.00 40.82 2.52
1417 1877 6.294361 TGGGTACATGCATACAGTATATCC 57.706 41.667 0.00 2.94 0.00 2.59
1419 1879 7.186268 TGGGTACATGCATACAGTATATCCTA 58.814 38.462 0.00 0.00 0.00 2.94
1421 1881 8.144478 GGGTACATGCATACAGTATATCCTATG 58.856 40.741 0.00 0.00 0.00 2.23
1422 1882 8.914011 GGTACATGCATACAGTATATCCTATGA 58.086 37.037 0.00 0.00 0.00 2.15
1475 1940 7.823149 ATACTTTTGAACATCGGTAGTGTAC 57.177 36.000 0.00 0.00 0.00 2.90
1478 1943 6.367969 ACTTTTGAACATCGGTAGTGTACATC 59.632 38.462 0.00 0.00 0.00 3.06
1479 1944 5.654603 TTGAACATCGGTAGTGTACATCT 57.345 39.130 0.00 0.87 0.00 2.90
1480 1945 6.762702 TTGAACATCGGTAGTGTACATCTA 57.237 37.500 0.00 0.00 0.00 1.98
1481 1946 6.373186 TGAACATCGGTAGTGTACATCTAG 57.627 41.667 0.00 0.00 0.00 2.43
1482 1947 5.884232 TGAACATCGGTAGTGTACATCTAGT 59.116 40.000 0.00 0.00 0.00 2.57
1483 1948 5.752892 ACATCGGTAGTGTACATCTAGTG 57.247 43.478 0.00 3.22 0.00 2.74
1488 1960 9.163899 CATCGGTAGTGTACATCTAGTGTATAT 57.836 37.037 0.00 0.00 44.65 0.86
1491 1963 8.441608 CGGTAGTGTACATCTAGTGTATATGTC 58.558 40.741 0.00 0.00 44.65 3.06
1585 2057 4.343814 TGCCTCCGATTCATATTACTGTCA 59.656 41.667 0.00 0.00 0.00 3.58
1588 2060 6.091441 GCCTCCGATTCATATTACTGTCATTC 59.909 42.308 0.00 0.00 0.00 2.67
1629 2188 8.015087 TGCACTAAATTTGTATTATATGAGCGC 58.985 33.333 0.00 0.00 0.00 5.92
1632 2191 9.284968 ACTAAATTTGTATTATATGAGCGCCTT 57.715 29.630 2.29 0.00 0.00 4.35
1679 2238 3.758554 CAGGGTTGATTCGTCCAAGAATT 59.241 43.478 0.00 0.00 40.58 2.17
1785 2354 7.538303 ACAACACTGGAATTTCAAATTTGTC 57.462 32.000 17.47 7.88 0.00 3.18
2267 2855 1.741770 GCGCGACCTCTTCACCATT 60.742 57.895 12.10 0.00 0.00 3.16
2702 3419 4.202202 TGGTTTGGAGCACATAAGTTTTGG 60.202 41.667 0.00 0.00 0.00 3.28
2709 3426 5.920840 GGAGCACATAAGTTTTGGTTCTTTC 59.079 40.000 0.00 0.00 0.00 2.62
2887 3638 3.930634 AACAATGGAAGAAAGAGCAGC 57.069 42.857 0.00 0.00 0.00 5.25
3245 4005 5.172411 GGTACTTGTTTGTGTTTATGTTGCG 59.828 40.000 0.00 0.00 0.00 4.85
4174 5510 1.277557 GACTCCATGGTGAAGTCTGCT 59.722 52.381 20.43 0.00 0.00 4.24
4342 5678 2.151369 GGATAGCAATCCCGGGGAA 58.849 57.895 23.50 1.15 45.37 3.97
4405 5843 3.896479 GCTTCAAAGCCCGAGGAG 58.104 61.111 3.27 0.00 46.20 3.69
4407 5845 1.003355 CTTCAAAGCCCGAGGAGCA 60.003 57.895 5.62 0.00 0.00 4.26
4487 5940 1.802715 CGAAATGCTGCAAAGCCCG 60.803 57.895 6.36 2.72 0.00 6.13
4523 5976 6.015180 TGCTTCAAAACTTGAGGATAGCAATT 60.015 34.615 9.80 0.00 43.13 2.32
4722 6176 5.238650 CCTTCCATTTACGTCTTGTTGAAGT 59.761 40.000 0.00 0.00 40.36 3.01
4723 6177 6.238648 CCTTCCATTTACGTCTTGTTGAAGTT 60.239 38.462 0.00 0.00 38.33 2.66
4724 6178 6.687081 TCCATTTACGTCTTGTTGAAGTTT 57.313 33.333 0.00 0.00 38.33 2.66
4725 6179 7.090953 TCCATTTACGTCTTGTTGAAGTTTT 57.909 32.000 0.00 0.00 38.33 2.43
4838 6295 5.804944 TCTTTTTGCCATTCCTTTGATCA 57.195 34.783 0.00 0.00 0.00 2.92
4845 6302 6.164417 TGCCATTCCTTTGATCAATTATGG 57.836 37.500 22.03 22.03 35.52 2.74
4846 6303 5.070714 TGCCATTCCTTTGATCAATTATGGG 59.929 40.000 24.69 17.37 33.55 4.00
4847 6304 5.511888 GCCATTCCTTTGATCAATTATGGGG 60.512 44.000 24.69 17.72 33.55 4.96
4848 6305 5.511888 CCATTCCTTTGATCAATTATGGGGC 60.512 44.000 20.24 0.00 0.00 5.80
4849 6306 4.541250 TCCTTTGATCAATTATGGGGCT 57.459 40.909 9.40 0.00 0.00 5.19
4850 6307 4.217510 TCCTTTGATCAATTATGGGGCTG 58.782 43.478 9.40 0.00 0.00 4.85
4851 6308 3.962718 CCTTTGATCAATTATGGGGCTGT 59.037 43.478 9.40 0.00 0.00 4.40
4852 6309 4.406649 CCTTTGATCAATTATGGGGCTGTT 59.593 41.667 9.40 0.00 0.00 3.16
4853 6310 5.104817 CCTTTGATCAATTATGGGGCTGTTT 60.105 40.000 9.40 0.00 0.00 2.83
4854 6311 5.341872 TTGATCAATTATGGGGCTGTTTG 57.658 39.130 3.38 0.00 0.00 2.93
4855 6312 3.705579 TGATCAATTATGGGGCTGTTTGG 59.294 43.478 0.00 0.00 0.00 3.28
4856 6313 3.182887 TCAATTATGGGGCTGTTTGGT 57.817 42.857 0.00 0.00 0.00 3.67
4857 6314 3.515562 TCAATTATGGGGCTGTTTGGTT 58.484 40.909 0.00 0.00 0.00 3.67
4858 6315 3.513515 TCAATTATGGGGCTGTTTGGTTC 59.486 43.478 0.00 0.00 0.00 3.62
4859 6316 2.990740 TTATGGGGCTGTTTGGTTCT 57.009 45.000 0.00 0.00 0.00 3.01
4860 6317 2.990740 TATGGGGCTGTTTGGTTCTT 57.009 45.000 0.00 0.00 0.00 2.52
4861 6318 1.341080 ATGGGGCTGTTTGGTTCTTG 58.659 50.000 0.00 0.00 0.00 3.02
4862 6319 0.032615 TGGGGCTGTTTGGTTCTTGT 60.033 50.000 0.00 0.00 0.00 3.16
4863 6320 0.673985 GGGGCTGTTTGGTTCTTGTC 59.326 55.000 0.00 0.00 0.00 3.18
4864 6321 0.673985 GGGCTGTTTGGTTCTTGTCC 59.326 55.000 0.00 0.00 0.00 4.02
4865 6322 1.692411 GGCTGTTTGGTTCTTGTCCT 58.308 50.000 0.00 0.00 0.00 3.85
4866 6323 1.609072 GGCTGTTTGGTTCTTGTCCTC 59.391 52.381 0.00 0.00 0.00 3.71
4867 6324 2.297701 GCTGTTTGGTTCTTGTCCTCA 58.702 47.619 0.00 0.00 0.00 3.86
4868 6325 2.687935 GCTGTTTGGTTCTTGTCCTCAA 59.312 45.455 0.00 0.00 0.00 3.02
4889 6346 1.986698 CAAATTTGCCTCGCCTGAAG 58.013 50.000 5.01 0.00 0.00 3.02
4890 6347 0.890683 AAATTTGCCTCGCCTGAAGG 59.109 50.000 0.00 0.00 38.53 3.46
4891 6348 0.251341 AATTTGCCTCGCCTGAAGGT 60.251 50.000 0.00 0.00 37.57 3.50
4892 6349 0.251341 ATTTGCCTCGCCTGAAGGTT 60.251 50.000 0.00 0.00 37.57 3.50
4893 6350 0.889186 TTTGCCTCGCCTGAAGGTTC 60.889 55.000 0.00 0.00 37.57 3.62
4894 6351 2.436824 GCCTCGCCTGAAGGTTCC 60.437 66.667 0.00 0.00 37.57 3.62
4895 6352 2.269241 CCTCGCCTGAAGGTTCCC 59.731 66.667 0.00 0.00 37.57 3.97
4896 6353 2.294078 CCTCGCCTGAAGGTTCCCT 61.294 63.158 0.00 0.00 37.57 4.20
4897 6354 1.078848 CTCGCCTGAAGGTTCCCTG 60.079 63.158 0.00 0.00 37.57 4.45
4898 6355 1.535444 TCGCCTGAAGGTTCCCTGA 60.535 57.895 0.00 0.00 37.57 3.86
4899 6356 1.078848 CGCCTGAAGGTTCCCTGAG 60.079 63.158 0.00 0.00 37.57 3.35
4900 6357 1.544825 CGCCTGAAGGTTCCCTGAGA 61.545 60.000 0.00 0.00 37.57 3.27
4901 6358 0.915364 GCCTGAAGGTTCCCTGAGAT 59.085 55.000 0.00 0.00 37.57 2.75
4902 6359 1.134250 GCCTGAAGGTTCCCTGAGATC 60.134 57.143 0.00 0.00 37.57 2.75
4903 6360 2.476199 CCTGAAGGTTCCCTGAGATCT 58.524 52.381 0.00 0.00 32.13 2.75
4904 6361 2.170187 CCTGAAGGTTCCCTGAGATCTG 59.830 54.545 0.00 0.00 32.13 2.90
4905 6362 1.556911 TGAAGGTTCCCTGAGATCTGC 59.443 52.381 0.00 0.00 32.13 4.26
4906 6363 0.915364 AAGGTTCCCTGAGATCTGCC 59.085 55.000 0.00 0.00 32.13 4.85
4907 6364 0.043940 AGGTTCCCTGAGATCTGCCT 59.956 55.000 0.00 0.00 29.57 4.75
4908 6365 0.179936 GGTTCCCTGAGATCTGCCTG 59.820 60.000 0.00 0.00 0.00 4.85
4909 6366 0.179936 GTTCCCTGAGATCTGCCTGG 59.820 60.000 0.00 0.00 0.00 4.45
4910 6367 0.043183 TTCCCTGAGATCTGCCTGGA 59.957 55.000 0.00 0.00 0.00 3.86
4911 6368 0.689080 TCCCTGAGATCTGCCTGGAC 60.689 60.000 0.00 0.00 0.00 4.02
4912 6369 0.690411 CCCTGAGATCTGCCTGGACT 60.690 60.000 0.00 0.00 0.00 3.85
4913 6370 0.752054 CCTGAGATCTGCCTGGACTC 59.248 60.000 0.00 0.00 0.00 3.36
4914 6371 1.688942 CCTGAGATCTGCCTGGACTCT 60.689 57.143 0.00 0.00 0.00 3.24
4915 6372 1.409790 CTGAGATCTGCCTGGACTCTG 59.590 57.143 0.00 0.00 0.00 3.35
4916 6373 1.272928 TGAGATCTGCCTGGACTCTGT 60.273 52.381 0.00 0.00 0.00 3.41
4917 6374 1.830477 GAGATCTGCCTGGACTCTGTT 59.170 52.381 0.00 0.00 0.00 3.16
4918 6375 2.235898 GAGATCTGCCTGGACTCTGTTT 59.764 50.000 0.00 0.00 0.00 2.83
4919 6376 2.027377 AGATCTGCCTGGACTCTGTTTG 60.027 50.000 0.00 0.00 0.00 2.93
4920 6377 0.397941 TCTGCCTGGACTCTGTTTGG 59.602 55.000 0.00 0.00 0.00 3.28
4921 6378 0.109342 CTGCCTGGACTCTGTTTGGT 59.891 55.000 0.00 0.00 0.00 3.67
4922 6379 0.550914 TGCCTGGACTCTGTTTGGTT 59.449 50.000 0.00 0.00 0.00 3.67
4923 6380 0.954452 GCCTGGACTCTGTTTGGTTG 59.046 55.000 0.00 0.00 0.00 3.77
4924 6381 1.609208 CCTGGACTCTGTTTGGTTGG 58.391 55.000 0.00 0.00 0.00 3.77
4925 6382 0.954452 CTGGACTCTGTTTGGTTGGC 59.046 55.000 0.00 0.00 0.00 4.52
4926 6383 0.817634 TGGACTCTGTTTGGTTGGCG 60.818 55.000 0.00 0.00 0.00 5.69
4927 6384 1.282875 GACTCTGTTTGGTTGGCGC 59.717 57.895 0.00 0.00 0.00 6.53
4928 6385 2.130073 GACTCTGTTTGGTTGGCGCC 62.130 60.000 22.73 22.73 0.00 6.53
4929 6386 1.898574 CTCTGTTTGGTTGGCGCCT 60.899 57.895 29.70 0.00 0.00 5.52
4930 6387 2.133742 CTCTGTTTGGTTGGCGCCTG 62.134 60.000 29.70 2.08 0.00 4.85
4931 6388 2.441164 TGTTTGGTTGGCGCCTGT 60.441 55.556 29.70 0.00 0.00 4.00
4932 6389 1.152943 TGTTTGGTTGGCGCCTGTA 60.153 52.632 29.70 10.40 0.00 2.74
4933 6390 0.538516 TGTTTGGTTGGCGCCTGTAT 60.539 50.000 29.70 0.00 0.00 2.29
4934 6391 1.271434 TGTTTGGTTGGCGCCTGTATA 60.271 47.619 29.70 2.88 0.00 1.47
4935 6392 1.131693 GTTTGGTTGGCGCCTGTATAC 59.868 52.381 29.70 16.48 0.00 1.47
4936 6393 0.616371 TTGGTTGGCGCCTGTATACT 59.384 50.000 29.70 0.00 0.00 2.12
4937 6394 0.177141 TGGTTGGCGCCTGTATACTC 59.823 55.000 29.70 8.85 0.00 2.59
4938 6395 0.874607 GGTTGGCGCCTGTATACTCG 60.875 60.000 29.70 6.43 0.00 4.18
4939 6396 0.101759 GTTGGCGCCTGTATACTCGA 59.898 55.000 29.70 0.00 0.00 4.04
4940 6397 0.818938 TTGGCGCCTGTATACTCGAA 59.181 50.000 29.70 6.16 0.00 3.71
4941 6398 0.384309 TGGCGCCTGTATACTCGAAG 59.616 55.000 29.70 0.19 0.00 3.79
4942 6399 0.940047 GGCGCCTGTATACTCGAAGC 60.940 60.000 22.15 8.79 0.00 3.86
4943 6400 0.030908 GCGCCTGTATACTCGAAGCT 59.969 55.000 13.92 0.00 0.00 3.74
4944 6401 1.266175 GCGCCTGTATACTCGAAGCTA 59.734 52.381 13.92 0.00 0.00 3.32
4945 6402 2.666069 GCGCCTGTATACTCGAAGCTAG 60.666 54.545 13.92 0.00 0.00 3.42
4946 6403 2.666069 CGCCTGTATACTCGAAGCTAGC 60.666 54.545 6.62 6.62 0.00 3.42
4947 6404 2.351932 GCCTGTATACTCGAAGCTAGCC 60.352 54.545 12.13 0.00 0.00 3.93
4948 6405 3.150767 CCTGTATACTCGAAGCTAGCCT 58.849 50.000 12.13 0.00 0.00 4.58
4949 6406 3.057876 CCTGTATACTCGAAGCTAGCCTG 60.058 52.174 12.13 1.12 0.00 4.85
4950 6407 2.885266 TGTATACTCGAAGCTAGCCTGG 59.115 50.000 12.13 0.00 0.00 4.45
4951 6408 0.676736 ATACTCGAAGCTAGCCTGGC 59.323 55.000 11.65 11.65 0.00 4.85
4952 6409 1.392710 TACTCGAAGCTAGCCTGGCC 61.393 60.000 16.57 0.00 0.00 5.36
4953 6410 2.364317 TCGAAGCTAGCCTGGCCT 60.364 61.111 16.57 2.05 0.00 5.19
4954 6411 2.202987 CGAAGCTAGCCTGGCCTG 60.203 66.667 16.57 9.66 0.00 4.85
4955 6412 2.191641 GAAGCTAGCCTGGCCTGG 59.808 66.667 23.89 23.89 0.00 4.45
4956 6413 3.412624 GAAGCTAGCCTGGCCTGGG 62.413 68.421 28.23 19.17 0.00 4.45
4957 6414 3.950861 AAGCTAGCCTGGCCTGGGA 62.951 63.158 28.23 3.98 0.00 4.37
4958 6415 3.411517 GCTAGCCTGGCCTGGGAA 61.412 66.667 28.23 9.96 0.00 3.97
4959 6416 2.761465 GCTAGCCTGGCCTGGGAAT 61.761 63.158 28.23 13.10 0.00 3.01
4960 6417 1.925888 CTAGCCTGGCCTGGGAATT 59.074 57.895 28.23 10.62 0.00 2.17
4961 6418 0.259938 CTAGCCTGGCCTGGGAATTT 59.740 55.000 28.23 8.51 0.00 1.82
4962 6419 1.494721 CTAGCCTGGCCTGGGAATTTA 59.505 52.381 28.23 9.09 0.00 1.40
4963 6420 0.709992 AGCCTGGCCTGGGAATTTAA 59.290 50.000 28.23 0.00 0.00 1.52
4964 6421 1.078656 AGCCTGGCCTGGGAATTTAAA 59.921 47.619 28.23 0.00 0.00 1.52
4965 6422 1.905894 GCCTGGCCTGGGAATTTAAAA 59.094 47.619 28.23 0.00 0.00 1.52
4966 6423 2.093500 GCCTGGCCTGGGAATTTAAAAG 60.093 50.000 28.23 0.66 0.00 2.27
4967 6424 2.093500 CCTGGCCTGGGAATTTAAAAGC 60.093 50.000 20.77 0.00 0.00 3.51
4968 6425 2.566724 CTGGCCTGGGAATTTAAAAGCA 59.433 45.455 3.32 0.00 0.00 3.91
4969 6426 3.180507 TGGCCTGGGAATTTAAAAGCAT 58.819 40.909 3.32 0.00 0.00 3.79
4970 6427 3.197549 TGGCCTGGGAATTTAAAAGCATC 59.802 43.478 3.32 0.00 0.00 3.91
4971 6428 3.197549 GGCCTGGGAATTTAAAAGCATCA 59.802 43.478 0.00 0.00 0.00 3.07
4972 6429 4.141642 GGCCTGGGAATTTAAAAGCATCAT 60.142 41.667 0.00 0.00 0.00 2.45
4973 6430 5.430886 GCCTGGGAATTTAAAAGCATCATT 58.569 37.500 0.00 0.00 0.00 2.57
4974 6431 6.407979 GGCCTGGGAATTTAAAAGCATCATTA 60.408 38.462 0.00 0.00 0.00 1.90
4975 6432 6.703165 GCCTGGGAATTTAAAAGCATCATTAG 59.297 38.462 0.00 0.00 0.00 1.73
4976 6433 6.703165 CCTGGGAATTTAAAAGCATCATTAGC 59.297 38.462 0.00 0.00 0.00 3.09
4977 6434 6.581712 TGGGAATTTAAAAGCATCATTAGCC 58.418 36.000 0.00 0.00 0.00 3.93
4978 6435 6.383726 TGGGAATTTAAAAGCATCATTAGCCT 59.616 34.615 0.00 0.00 0.00 4.58
4979 6436 6.703165 GGGAATTTAAAAGCATCATTAGCCTG 59.297 38.462 0.00 0.00 0.00 4.85
4980 6437 6.201615 GGAATTTAAAAGCATCATTAGCCTGC 59.798 38.462 0.00 0.00 36.15 4.85
4981 6438 4.654091 TTAAAAGCATCATTAGCCTGCC 57.346 40.909 0.00 0.00 36.56 4.85
4982 6439 2.449137 AAAGCATCATTAGCCTGCCT 57.551 45.000 0.00 0.00 36.56 4.75
4983 6440 2.449137 AAGCATCATTAGCCTGCCTT 57.551 45.000 0.00 0.00 36.56 4.35
4984 6441 1.688772 AGCATCATTAGCCTGCCTTG 58.311 50.000 0.00 0.00 36.56 3.61
4985 6442 0.672342 GCATCATTAGCCTGCCTTGG 59.328 55.000 0.00 0.00 0.00 3.61
4986 6443 1.751733 GCATCATTAGCCTGCCTTGGA 60.752 52.381 0.00 0.00 0.00 3.53
4987 6444 2.658285 CATCATTAGCCTGCCTTGGAA 58.342 47.619 0.00 0.00 0.00 3.53
4988 6445 2.897271 TCATTAGCCTGCCTTGGAAA 57.103 45.000 0.00 0.00 0.00 3.13
4989 6446 2.446435 TCATTAGCCTGCCTTGGAAAC 58.554 47.619 0.00 0.00 0.00 2.78
4990 6447 1.478105 CATTAGCCTGCCTTGGAAACC 59.522 52.381 0.00 0.00 0.00 3.27
4991 6448 0.608035 TTAGCCTGCCTTGGAAACCG 60.608 55.000 0.00 0.00 0.00 4.44
4992 6449 1.485294 TAGCCTGCCTTGGAAACCGA 61.485 55.000 0.00 0.00 0.00 4.69
4993 6450 1.901464 GCCTGCCTTGGAAACCGAA 60.901 57.895 0.00 0.00 0.00 4.30
4994 6451 1.866853 GCCTGCCTTGGAAACCGAAG 61.867 60.000 0.00 0.00 0.00 3.79
4995 6452 0.250727 CCTGCCTTGGAAACCGAAGA 60.251 55.000 0.00 0.00 0.00 2.87
4996 6453 1.604604 CTGCCTTGGAAACCGAAGAA 58.395 50.000 0.00 0.00 0.00 2.52
4997 6454 2.162681 CTGCCTTGGAAACCGAAGAAT 58.837 47.619 0.00 0.00 0.00 2.40
4998 6455 1.885887 TGCCTTGGAAACCGAAGAATG 59.114 47.619 0.00 0.00 0.00 2.67
4999 6456 1.886542 GCCTTGGAAACCGAAGAATGT 59.113 47.619 0.00 0.00 0.00 2.71
5000 6457 2.095212 GCCTTGGAAACCGAAGAATGTC 60.095 50.000 0.00 0.00 0.00 3.06
5001 6458 3.146066 CCTTGGAAACCGAAGAATGTCA 58.854 45.455 0.00 0.00 0.00 3.58
5002 6459 3.058224 CCTTGGAAACCGAAGAATGTCAC 60.058 47.826 0.00 0.00 0.00 3.67
5003 6460 3.485463 TGGAAACCGAAGAATGTCACT 57.515 42.857 0.00 0.00 0.00 3.41
5004 6461 4.610605 TGGAAACCGAAGAATGTCACTA 57.389 40.909 0.00 0.00 0.00 2.74
5005 6462 4.566004 TGGAAACCGAAGAATGTCACTAG 58.434 43.478 0.00 0.00 0.00 2.57
5006 6463 3.371285 GGAAACCGAAGAATGTCACTAGC 59.629 47.826 0.00 0.00 0.00 3.42
5007 6464 2.674796 ACCGAAGAATGTCACTAGCC 57.325 50.000 0.00 0.00 0.00 3.93
5008 6465 2.180276 ACCGAAGAATGTCACTAGCCT 58.820 47.619 0.00 0.00 0.00 4.58
5009 6466 2.093973 ACCGAAGAATGTCACTAGCCTG 60.094 50.000 0.00 0.00 0.00 4.85
5010 6467 2.544685 CGAAGAATGTCACTAGCCTGG 58.455 52.381 0.00 0.00 0.00 4.45
5011 6468 2.739932 CGAAGAATGTCACTAGCCTGGG 60.740 54.545 0.00 0.00 0.00 4.45
5012 6469 0.543749 AGAATGTCACTAGCCTGGGC 59.456 55.000 3.00 3.00 42.33 5.36
5013 6470 0.464554 GAATGTCACTAGCCTGGGCC 60.465 60.000 8.11 0.00 43.17 5.80
5014 6471 1.207488 AATGTCACTAGCCTGGGCCA 61.207 55.000 5.85 5.85 43.17 5.36
5015 6472 1.630126 ATGTCACTAGCCTGGGCCAG 61.630 60.000 27.04 27.04 43.17 4.85
5024 6481 4.659172 CTGGGCCAGGCAACCGAA 62.659 66.667 26.34 0.00 37.17 4.30
5025 6482 4.211330 TGGGCCAGGCAACCGAAA 62.211 61.111 15.19 0.00 37.17 3.46
5026 6483 2.915137 GGGCCAGGCAACCGAAAA 60.915 61.111 15.19 0.00 37.17 2.29
5027 6484 2.503382 GGGCCAGGCAACCGAAAAA 61.503 57.895 15.19 0.00 37.17 1.94
5028 6485 1.006220 GGCCAGGCAACCGAAAAAG 60.006 57.895 15.19 0.00 37.17 2.27
5029 6486 1.006220 GCCAGGCAACCGAAAAAGG 60.006 57.895 6.55 0.00 37.30 3.11
5030 6487 1.460273 GCCAGGCAACCGAAAAAGGA 61.460 55.000 6.55 0.00 34.73 3.36
5031 6488 0.313987 CCAGGCAACCGAAAAAGGAC 59.686 55.000 0.00 0.00 34.73 3.85
5032 6489 0.040425 CAGGCAACCGAAAAAGGACG 60.040 55.000 0.00 0.00 34.73 4.79
5033 6490 1.371267 GGCAACCGAAAAAGGACGC 60.371 57.895 0.00 0.00 34.73 5.19
5034 6491 1.371267 GCAACCGAAAAAGGACGCC 60.371 57.895 0.00 0.00 34.73 5.68
5035 6492 1.792118 GCAACCGAAAAAGGACGCCT 61.792 55.000 0.00 0.00 33.87 5.52
5036 6493 0.040425 CAACCGAAAAAGGACGCCTG 60.040 55.000 0.00 0.00 32.13 4.85
5037 6494 1.170290 AACCGAAAAAGGACGCCTGG 61.170 55.000 0.00 0.00 32.13 4.45
5038 6495 2.332654 CCGAAAAAGGACGCCTGGG 61.333 63.158 0.00 0.00 32.13 4.45
5039 6496 1.599797 CGAAAAAGGACGCCTGGGT 60.600 57.895 0.00 0.00 32.13 4.51
5040 6497 1.852067 CGAAAAAGGACGCCTGGGTG 61.852 60.000 0.00 0.00 32.13 4.61
5041 6498 2.142357 GAAAAAGGACGCCTGGGTGC 62.142 60.000 0.00 0.00 32.13 5.01
5042 6499 2.640581 AAAAAGGACGCCTGGGTGCT 62.641 55.000 2.53 2.53 40.59 4.40
5043 6500 3.850098 AAAGGACGCCTGGGTGCTG 62.850 63.158 9.03 0.00 38.69 4.41
5050 6507 3.324930 CCTGGGTGCTGCCTGAGA 61.325 66.667 0.00 0.00 37.43 3.27
5051 6508 2.752358 CTGGGTGCTGCCTGAGAA 59.248 61.111 0.00 0.00 37.43 2.87
5052 6509 1.302285 CTGGGTGCTGCCTGAGAAT 59.698 57.895 0.00 0.00 37.43 2.40
5053 6510 1.001764 TGGGTGCTGCCTGAGAATG 60.002 57.895 0.00 0.00 37.43 2.67
5054 6511 2.413142 GGGTGCTGCCTGAGAATGC 61.413 63.158 0.00 0.00 37.43 3.56
5055 6512 1.378250 GGTGCTGCCTGAGAATGCT 60.378 57.895 0.00 0.00 0.00 3.79
5056 6513 0.107508 GGTGCTGCCTGAGAATGCTA 60.108 55.000 0.00 0.00 0.00 3.49
5057 6514 1.679944 GGTGCTGCCTGAGAATGCTAA 60.680 52.381 0.00 0.00 0.00 3.09
5058 6515 2.086869 GTGCTGCCTGAGAATGCTAAA 58.913 47.619 0.00 0.00 0.00 1.85
5059 6516 2.086869 TGCTGCCTGAGAATGCTAAAC 58.913 47.619 0.00 0.00 0.00 2.01
5060 6517 2.086869 GCTGCCTGAGAATGCTAAACA 58.913 47.619 0.00 0.00 0.00 2.83
5061 6518 2.686915 GCTGCCTGAGAATGCTAAACAT 59.313 45.455 0.00 0.00 42.30 2.71
5062 6519 3.488721 GCTGCCTGAGAATGCTAAACATG 60.489 47.826 0.00 0.00 39.60 3.21
5063 6520 2.424601 TGCCTGAGAATGCTAAACATGC 59.575 45.455 0.00 0.00 39.60 4.06
5064 6521 2.424601 GCCTGAGAATGCTAAACATGCA 59.575 45.455 0.00 0.00 44.95 3.96
5073 6530 4.690184 TGCTAAACATGCATGTGAGAAG 57.310 40.909 31.68 25.35 41.61 2.85
5074 6531 3.441222 TGCTAAACATGCATGTGAGAAGG 59.559 43.478 31.68 20.73 41.61 3.46
5075 6532 3.691118 GCTAAACATGCATGTGAGAAGGA 59.309 43.478 31.68 15.18 41.61 3.36
5076 6533 4.156556 GCTAAACATGCATGTGAGAAGGAA 59.843 41.667 31.68 14.50 41.61 3.36
5077 6534 5.335897 GCTAAACATGCATGTGAGAAGGAAA 60.336 40.000 31.68 13.33 41.61 3.13
5078 6535 5.534207 AAACATGCATGTGAGAAGGAAAA 57.466 34.783 31.98 0.00 41.61 2.29
5079 6536 4.778534 ACATGCATGTGAGAAGGAAAAG 57.221 40.909 30.92 0.13 40.03 2.27
5080 6537 4.401022 ACATGCATGTGAGAAGGAAAAGA 58.599 39.130 30.92 0.00 40.03 2.52
5081 6538 4.217118 ACATGCATGTGAGAAGGAAAAGAC 59.783 41.667 30.92 0.00 40.03 3.01
5082 6539 3.819368 TGCATGTGAGAAGGAAAAGACA 58.181 40.909 0.00 0.00 0.00 3.41
5083 6540 3.565482 TGCATGTGAGAAGGAAAAGACAC 59.435 43.478 0.00 0.00 0.00 3.67
5084 6541 3.057946 GCATGTGAGAAGGAAAAGACACC 60.058 47.826 0.00 0.00 0.00 4.16
5085 6542 4.392940 CATGTGAGAAGGAAAAGACACCT 58.607 43.478 0.00 0.00 38.23 4.00
5086 6543 5.551233 CATGTGAGAAGGAAAAGACACCTA 58.449 41.667 0.00 0.00 35.25 3.08
5087 6544 5.623956 TGTGAGAAGGAAAAGACACCTAA 57.376 39.130 0.00 0.00 35.25 2.69
5088 6545 6.187727 TGTGAGAAGGAAAAGACACCTAAT 57.812 37.500 0.00 0.00 35.25 1.73
5089 6546 7.311092 TGTGAGAAGGAAAAGACACCTAATA 57.689 36.000 0.00 0.00 35.25 0.98
5090 6547 7.386851 TGTGAGAAGGAAAAGACACCTAATAG 58.613 38.462 0.00 0.00 35.25 1.73
5091 6548 6.819146 GTGAGAAGGAAAAGACACCTAATAGG 59.181 42.308 4.46 4.46 42.49 2.57
5092 6549 5.746284 AGAAGGAAAAGACACCTAATAGGC 58.254 41.667 6.17 0.00 39.63 3.93
5093 6550 5.489278 AGAAGGAAAAGACACCTAATAGGCT 59.511 40.000 6.17 0.00 39.63 4.58
5094 6551 5.104259 AGGAAAAGACACCTAATAGGCTG 57.896 43.478 6.17 6.77 39.63 4.85
5095 6552 4.783227 AGGAAAAGACACCTAATAGGCTGA 59.217 41.667 6.17 0.00 39.63 4.26
5096 6553 5.430089 AGGAAAAGACACCTAATAGGCTGAT 59.570 40.000 6.17 0.00 39.63 2.90
5097 6554 5.529060 GGAAAAGACACCTAATAGGCTGATG 59.471 44.000 6.17 0.00 39.63 3.07
5098 6555 5.700402 AAAGACACCTAATAGGCTGATGT 57.300 39.130 6.17 3.02 39.63 3.06
5099 6556 4.679373 AGACACCTAATAGGCTGATGTG 57.321 45.455 6.17 0.00 39.63 3.21
5100 6557 4.290093 AGACACCTAATAGGCTGATGTGA 58.710 43.478 6.17 0.00 39.63 3.58
5101 6558 4.100189 AGACACCTAATAGGCTGATGTGAC 59.900 45.833 6.17 0.00 39.63 3.67
5102 6559 3.774766 ACACCTAATAGGCTGATGTGACA 59.225 43.478 6.17 0.00 39.63 3.58
5103 6560 4.410228 ACACCTAATAGGCTGATGTGACAT 59.590 41.667 6.17 0.00 39.63 3.06
5104 6561 4.993584 CACCTAATAGGCTGATGTGACATC 59.006 45.833 18.25 18.25 39.63 3.06
5105 6562 4.904251 ACCTAATAGGCTGATGTGACATCT 59.096 41.667 24.31 8.50 39.63 2.90
5106 6563 6.015095 CACCTAATAGGCTGATGTGACATCTA 60.015 42.308 24.31 10.36 39.63 1.98
5107 6564 6.210385 ACCTAATAGGCTGATGTGACATCTAG 59.790 42.308 24.31 19.49 39.63 2.43
5108 6565 6.435591 CCTAATAGGCTGATGTGACATCTAGA 59.564 42.308 24.31 5.60 0.00 2.43
5109 6566 6.737720 AATAGGCTGATGTGACATCTAGAA 57.262 37.500 24.31 5.25 0.00 2.10
5110 6567 6.931790 ATAGGCTGATGTGACATCTAGAAT 57.068 37.500 24.31 13.98 0.00 2.40
5111 6568 5.212532 AGGCTGATGTGACATCTAGAATC 57.787 43.478 24.31 13.03 0.00 2.52
5112 6569 4.040217 AGGCTGATGTGACATCTAGAATCC 59.960 45.833 24.31 15.52 0.00 3.01
5113 6570 4.202295 GGCTGATGTGACATCTAGAATCCA 60.202 45.833 24.31 3.43 0.00 3.41
5114 6571 4.749099 GCTGATGTGACATCTAGAATCCAC 59.251 45.833 24.31 5.72 0.00 4.02
5115 6572 5.683249 GCTGATGTGACATCTAGAATCCACA 60.683 44.000 24.31 19.67 38.63 4.17
5116 6573 6.298441 TGATGTGACATCTAGAATCCACAA 57.702 37.500 24.31 9.04 37.93 3.33
5117 6574 6.108687 TGATGTGACATCTAGAATCCACAAC 58.891 40.000 24.31 18.84 37.93 3.32
5118 6575 4.832248 TGTGACATCTAGAATCCACAACC 58.168 43.478 16.86 0.00 32.44 3.77
5119 6576 4.285775 TGTGACATCTAGAATCCACAACCA 59.714 41.667 16.86 1.06 32.44 3.67
5120 6577 4.872691 GTGACATCTAGAATCCACAACCAG 59.127 45.833 13.50 0.00 0.00 4.00
5121 6578 4.080919 TGACATCTAGAATCCACAACCAGG 60.081 45.833 0.00 0.00 0.00 4.45
5122 6579 3.209410 CATCTAGAATCCACAACCAGGC 58.791 50.000 0.00 0.00 0.00 4.85
5123 6580 1.207089 TCTAGAATCCACAACCAGGCG 59.793 52.381 0.00 0.00 0.00 5.52
5124 6581 0.981183 TAGAATCCACAACCAGGCGT 59.019 50.000 0.00 0.00 0.00 5.68
5125 6582 0.606401 AGAATCCACAACCAGGCGTG 60.606 55.000 0.00 0.00 0.00 5.34
5140 6597 4.134623 GTGGTCACGAGCCAAACA 57.865 55.556 0.00 0.00 37.81 2.83
5141 6598 2.629002 GTGGTCACGAGCCAAACAT 58.371 52.632 0.00 0.00 37.81 2.71
5142 6599 0.238289 GTGGTCACGAGCCAAACATG 59.762 55.000 0.00 0.00 37.81 3.21
5143 6600 0.888736 TGGTCACGAGCCAAACATGG 60.889 55.000 0.00 0.00 32.29 3.66
5152 6609 1.294138 CCAAACATGGCTTGCCTGG 59.706 57.895 13.18 7.74 0.00 4.45
5153 6610 1.375013 CAAACATGGCTTGCCTGGC 60.375 57.895 12.87 12.87 0.00 4.85
5165 6622 2.736531 CCTGGCCAGGCACAAAAC 59.263 61.111 38.39 0.00 42.44 2.43
5166 6623 1.833934 CCTGGCCAGGCACAAAACT 60.834 57.895 38.39 0.00 42.44 2.66
5167 6624 1.364901 CTGGCCAGGCACAAAACTG 59.635 57.895 26.14 0.00 34.54 3.16
5168 6625 2.029518 GGCCAGGCACAAAACTGC 59.970 61.111 15.19 0.00 36.33 4.40
5169 6626 2.795110 GGCCAGGCACAAAACTGCA 61.795 57.895 15.19 0.00 39.08 4.41
5170 6627 1.592400 GCCAGGCACAAAACTGCAC 60.592 57.895 6.55 0.00 39.08 4.57
5171 6628 1.067916 CCAGGCACAAAACTGCACC 59.932 57.895 0.00 0.00 39.08 5.01
5172 6629 1.674764 CCAGGCACAAAACTGCACCA 61.675 55.000 0.00 0.00 39.08 4.17
5173 6630 0.390124 CAGGCACAAAACTGCACCAT 59.610 50.000 0.00 0.00 39.08 3.55
5174 6631 0.675633 AGGCACAAAACTGCACCATC 59.324 50.000 0.00 0.00 39.08 3.51
5175 6632 0.319813 GGCACAAAACTGCACCATCC 60.320 55.000 0.00 0.00 39.08 3.51
5176 6633 0.319813 GCACAAAACTGCACCATCCC 60.320 55.000 0.00 0.00 37.11 3.85
5177 6634 1.039068 CACAAAACTGCACCATCCCA 58.961 50.000 0.00 0.00 0.00 4.37
5178 6635 1.000060 CACAAAACTGCACCATCCCAG 60.000 52.381 0.00 0.00 35.26 4.45
5179 6636 0.604578 CAAAACTGCACCATCCCAGG 59.395 55.000 0.00 0.00 33.43 4.45
5180 6637 1.187567 AAAACTGCACCATCCCAGGC 61.188 55.000 0.00 0.00 33.43 4.85
5181 6638 3.925630 AACTGCACCATCCCAGGCG 62.926 63.158 0.00 0.00 33.43 5.52
5182 6639 4.415150 CTGCACCATCCCAGGCGT 62.415 66.667 0.00 0.00 0.00 5.68
5183 6640 4.720902 TGCACCATCCCAGGCGTG 62.721 66.667 0.00 0.00 0.00 5.34
5184 6641 4.408821 GCACCATCCCAGGCGTGA 62.409 66.667 8.24 0.00 0.00 4.35
5185 6642 2.124983 CACCATCCCAGGCGTGAG 60.125 66.667 8.24 0.00 0.00 3.51
5203 6660 3.329114 GCCAGGCGCTCAAATTTAC 57.671 52.632 7.64 0.00 0.00 2.01
5204 6661 0.179137 GCCAGGCGCTCAAATTTACC 60.179 55.000 7.64 0.00 0.00 2.85
5205 6662 1.173043 CCAGGCGCTCAAATTTACCA 58.827 50.000 7.64 0.00 0.00 3.25
5206 6663 1.133025 CCAGGCGCTCAAATTTACCAG 59.867 52.381 7.64 0.00 0.00 4.00
5207 6664 1.133025 CAGGCGCTCAAATTTACCAGG 59.867 52.381 7.64 0.00 0.00 4.45
5208 6665 0.179137 GGCGCTCAAATTTACCAGGC 60.179 55.000 7.64 0.00 0.00 4.85
5209 6666 0.525761 GCGCTCAAATTTACCAGGCA 59.474 50.000 0.00 0.00 0.00 4.75
5210 6667 1.732405 GCGCTCAAATTTACCAGGCAC 60.732 52.381 0.00 0.00 0.00 5.01
5211 6668 1.465689 CGCTCAAATTTACCAGGCACG 60.466 52.381 0.00 0.00 0.00 5.34
5212 6669 1.732405 GCTCAAATTTACCAGGCACGC 60.732 52.381 0.00 0.00 0.00 5.34
5213 6670 1.812571 CTCAAATTTACCAGGCACGCT 59.187 47.619 0.00 0.00 0.00 5.07
5214 6671 1.539388 TCAAATTTACCAGGCACGCTG 59.461 47.619 0.00 0.00 0.00 5.18
5215 6672 1.269448 CAAATTTACCAGGCACGCTGT 59.731 47.619 0.00 0.00 0.00 4.40
5216 6673 1.165270 AATTTACCAGGCACGCTGTC 58.835 50.000 0.00 0.00 0.00 3.51
5217 6674 0.676782 ATTTACCAGGCACGCTGTCC 60.677 55.000 0.00 0.00 0.00 4.02
5218 6675 2.046009 TTTACCAGGCACGCTGTCCA 62.046 55.000 0.00 0.00 0.00 4.02
5219 6676 2.449031 TTACCAGGCACGCTGTCCAG 62.449 60.000 0.00 0.00 0.00 3.86
5221 6678 4.007644 CAGGCACGCTGTCCAGGA 62.008 66.667 0.00 0.00 0.00 3.86
5222 6679 3.241530 AGGCACGCTGTCCAGGAA 61.242 61.111 0.00 0.00 0.00 3.36
5223 6680 2.281484 GGCACGCTGTCCAGGAAA 60.281 61.111 0.00 0.00 0.00 3.13
5224 6681 2.328099 GGCACGCTGTCCAGGAAAG 61.328 63.158 1.50 1.50 0.00 2.62
5225 6682 2.970974 GCACGCTGTCCAGGAAAGC 61.971 63.158 20.94 20.94 39.36 3.51
5226 6683 1.597854 CACGCTGTCCAGGAAAGCA 60.598 57.895 28.44 5.28 42.60 3.91
5227 6684 1.148273 ACGCTGTCCAGGAAAGCAA 59.852 52.632 28.44 0.00 42.60 3.91
5228 6685 1.166531 ACGCTGTCCAGGAAAGCAAC 61.167 55.000 28.44 2.75 42.60 4.17
5229 6686 1.856265 CGCTGTCCAGGAAAGCAACC 61.856 60.000 28.44 2.40 42.60 3.77
5230 6687 0.823356 GCTGTCCAGGAAAGCAACCA 60.823 55.000 25.22 0.00 42.10 3.67
5231 6688 1.691196 CTGTCCAGGAAAGCAACCAA 58.309 50.000 0.00 0.00 0.00 3.67
5232 6689 2.031120 CTGTCCAGGAAAGCAACCAAA 58.969 47.619 0.00 0.00 0.00 3.28
5233 6690 1.754226 TGTCCAGGAAAGCAACCAAAC 59.246 47.619 0.00 0.00 0.00 2.93
5234 6691 2.031870 GTCCAGGAAAGCAACCAAACT 58.968 47.619 0.00 0.00 0.00 2.66
5235 6692 2.031120 TCCAGGAAAGCAACCAAACTG 58.969 47.619 0.00 0.00 0.00 3.16
5236 6693 1.538849 CCAGGAAAGCAACCAAACTGC 60.539 52.381 0.00 0.00 40.24 4.40
5237 6694 0.752658 AGGAAAGCAACCAAACTGCC 59.247 50.000 0.00 0.00 40.86 4.85
5238 6695 0.249868 GGAAAGCAACCAAACTGCCC 60.250 55.000 0.00 0.00 40.86 5.36
5239 6696 0.249868 GAAAGCAACCAAACTGCCCC 60.250 55.000 0.00 0.00 40.86 5.80
5240 6697 0.690744 AAAGCAACCAAACTGCCCCT 60.691 50.000 0.00 0.00 40.86 4.79
5241 6698 0.187361 AAGCAACCAAACTGCCCCTA 59.813 50.000 0.00 0.00 40.86 3.53
5242 6699 0.409484 AGCAACCAAACTGCCCCTAT 59.591 50.000 0.00 0.00 40.86 2.57
5243 6700 0.532115 GCAACCAAACTGCCCCTATG 59.468 55.000 0.00 0.00 33.51 2.23
5250 6707 3.214328 CAAACTGCCCCTATGTCCATAC 58.786 50.000 0.00 0.00 0.00 2.39
5427 6887 9.263446 TCTTACCAAAAGAAGCTATTACCTCTA 57.737 33.333 0.00 0.00 0.00 2.43
5432 6892 7.171678 CCAAAAGAAGCTATTACCTCTATTCCG 59.828 40.741 0.00 0.00 0.00 4.30
5461 6921 7.981102 AATTGAAGTTCTAGGTTTGTCCTAC 57.019 36.000 4.17 0.00 46.10 3.18
5477 6937 7.556733 TTGTCCTACGTCAAACTTGTTAAAT 57.443 32.000 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 3.915575 GGAGCATGTCCAAGCCTG 58.084 61.111 8.84 0.00 46.10 4.85
138 141 3.787001 GGTGGGGAAGGCTCCGAG 61.787 72.222 0.00 0.00 43.51 4.63
197 200 0.104487 CAGCGCCTGAGATGATGACT 59.896 55.000 2.29 0.00 32.44 3.41
252 255 2.202623 GCGTCTCTACCGGCACTG 60.203 66.667 0.00 0.00 0.00 3.66
255 258 3.755628 GGTGCGTCTCTACCGGCA 61.756 66.667 0.00 0.00 0.00 5.69
322 333 0.096976 CGTCCAACATCAATCGGCAC 59.903 55.000 0.00 0.00 0.00 5.01
353 365 5.480422 TCAAAATAAGAAGGGAGAAAAGGCC 59.520 40.000 0.00 0.00 0.00 5.19
378 390 1.079490 AGATTCAGACTCCACAGGGGA 59.921 52.381 0.00 0.00 45.89 4.81
379 391 1.484240 GAGATTCAGACTCCACAGGGG 59.516 57.143 0.00 0.00 38.37 4.79
380 392 2.168106 CAGAGATTCAGACTCCACAGGG 59.832 54.545 0.00 0.00 35.27 4.45
381 393 2.830923 ACAGAGATTCAGACTCCACAGG 59.169 50.000 0.00 0.00 35.27 4.00
383 395 3.500343 TGACAGAGATTCAGACTCCACA 58.500 45.455 0.00 0.00 35.27 4.17
384 396 3.761218 TCTGACAGAGATTCAGACTCCAC 59.239 47.826 0.00 0.00 43.69 4.02
385 397 4.039603 TCTGACAGAGATTCAGACTCCA 57.960 45.455 0.00 0.00 43.69 3.86
400 412 2.724977 AACGAGAGCGAAATCTGACA 57.275 45.000 0.00 0.00 41.64 3.58
427 439 1.145598 CTGCGTCTGCTCCCATCAT 59.854 57.895 0.00 0.00 43.34 2.45
430 442 2.937379 GATGCTGCGTCTGCTCCCAT 62.937 60.000 14.43 0.00 43.34 4.00
458 470 2.045340 CCTAAACCACGGGCCCAG 60.045 66.667 24.92 17.36 0.00 4.45
462 474 0.035739 TCAAGACCTAAACCACGGGC 59.964 55.000 0.00 0.00 0.00 6.13
464 476 3.328382 TCATCAAGACCTAAACCACGG 57.672 47.619 0.00 0.00 0.00 4.94
482 494 0.240145 AAGACACGACGCGATCTTCA 59.760 50.000 15.93 0.00 33.39 3.02
483 495 0.635731 CAAGACACGACGCGATCTTC 59.364 55.000 15.93 0.00 35.20 2.87
486 498 1.002250 ACACAAGACACGACGCGATC 61.002 55.000 15.93 5.79 0.00 3.69
497 509 9.979270 CTATCATTCATGTTAAAGACACAAGAC 57.021 33.333 0.00 0.00 42.04 3.01
522 535 7.617329 TGTGCTATGCAGATTACTCCTATATCT 59.383 37.037 0.00 0.00 40.08 1.98
523 536 7.776107 TGTGCTATGCAGATTACTCCTATATC 58.224 38.462 0.00 0.00 40.08 1.63
524 537 7.724490 TGTGCTATGCAGATTACTCCTATAT 57.276 36.000 0.00 0.00 40.08 0.86
525 538 7.724490 ATGTGCTATGCAGATTACTCCTATA 57.276 36.000 0.00 0.00 39.52 1.31
528 541 4.970860 ATGTGCTATGCAGATTACTCCT 57.029 40.909 0.00 0.00 39.52 3.69
529 542 6.348050 GCTTTATGTGCTATGCAGATTACTCC 60.348 42.308 7.46 0.00 39.52 3.85
530 543 6.426328 AGCTTTATGTGCTATGCAGATTACTC 59.574 38.462 7.46 0.00 39.52 2.59
532 545 6.203530 TGAGCTTTATGTGCTATGCAGATTAC 59.796 38.462 7.46 0.00 39.52 1.89
545 563 2.543848 ACACACACGTGAGCTTTATGTG 59.456 45.455 25.01 24.13 46.80 3.21
550 568 2.159156 TCACTACACACACGTGAGCTTT 60.159 45.455 25.01 4.68 46.80 3.51
579 599 1.068741 GGGGAACGCATCGTCTTATCT 59.931 52.381 0.00 0.00 39.99 1.98
635 655 2.601666 TGTCCTGTCTCTGCGGCT 60.602 61.111 0.00 0.00 0.00 5.52
670 690 2.708325 AGCTCCTGTCCTGTCTCTTTTT 59.292 45.455 0.00 0.00 0.00 1.94
671 691 2.038295 CAGCTCCTGTCCTGTCTCTTTT 59.962 50.000 0.00 0.00 0.00 2.27
672 692 1.622811 CAGCTCCTGTCCTGTCTCTTT 59.377 52.381 0.00 0.00 0.00 2.52
673 693 1.265236 CAGCTCCTGTCCTGTCTCTT 58.735 55.000 0.00 0.00 0.00 2.85
674 694 0.614415 CCAGCTCCTGTCCTGTCTCT 60.614 60.000 0.00 0.00 0.00 3.10
675 695 1.896694 CCAGCTCCTGTCCTGTCTC 59.103 63.158 0.00 0.00 0.00 3.36
693 713 2.340337 GACCATTTGGATTTGTGCTGC 58.660 47.619 3.01 0.00 38.94 5.25
694 714 2.228582 TCGACCATTTGGATTTGTGCTG 59.771 45.455 3.01 0.00 38.94 4.41
731 751 1.613925 CGTGAGGTGAGGTGAGAAAGA 59.386 52.381 0.00 0.00 0.00 2.52
732 752 1.341531 ACGTGAGGTGAGGTGAGAAAG 59.658 52.381 0.00 0.00 0.00 2.62
733 753 1.410004 ACGTGAGGTGAGGTGAGAAA 58.590 50.000 0.00 0.00 0.00 2.52
734 754 3.127099 ACGTGAGGTGAGGTGAGAA 57.873 52.632 0.00 0.00 0.00 2.87
735 755 4.923068 ACGTGAGGTGAGGTGAGA 57.077 55.556 0.00 0.00 0.00 3.27
785 816 1.920325 CAGGTCTCTTGGGCCAGGA 60.920 63.158 18.20 18.20 0.00 3.86
788 819 2.853542 TGCAGGTCTCTTGGGCCA 60.854 61.111 0.00 0.00 0.00 5.36
789 820 2.045536 CTGCAGGTCTCTTGGGCC 60.046 66.667 5.57 0.00 0.00 5.80
790 821 2.749441 GCTGCAGGTCTCTTGGGC 60.749 66.667 17.12 0.00 0.00 5.36
791 822 2.435586 CGCTGCAGGTCTCTTGGG 60.436 66.667 17.12 0.00 0.00 4.12
792 823 1.739562 GTCGCTGCAGGTCTCTTGG 60.740 63.158 17.12 0.00 0.00 3.61
795 826 2.986413 ACGTCGCTGCAGGTCTCT 60.986 61.111 17.12 0.00 0.00 3.10
888 1272 4.901849 TCCTGAAAACAGAAAGAGGAGAGA 59.098 41.667 0.00 0.00 0.00 3.10
889 1273 5.220710 TCCTGAAAACAGAAAGAGGAGAG 57.779 43.478 0.00 0.00 0.00 3.20
920 1343 6.381801 CGATTTATCTGCAAGTTTGTTTCCT 58.618 36.000 0.00 0.00 33.76 3.36
1186 1610 5.479306 CCTAAACATTCTCACGGAAAGAGA 58.521 41.667 0.00 0.00 40.20 3.10
1187 1611 4.631813 CCCTAAACATTCTCACGGAAAGAG 59.368 45.833 0.00 0.00 37.49 2.85
1416 1876 6.765512 GGAACAGAGAGAAGGAAAATCATAGG 59.234 42.308 0.00 0.00 0.00 2.57
1417 1877 7.563906 AGGAACAGAGAGAAGGAAAATCATAG 58.436 38.462 0.00 0.00 0.00 2.23
1419 1879 6.385766 AGGAACAGAGAGAAGGAAAATCAT 57.614 37.500 0.00 0.00 0.00 2.45
1421 1881 8.800370 AATTAGGAACAGAGAGAAGGAAAATC 57.200 34.615 0.00 0.00 0.00 2.17
1475 1940 8.204160 TGGAAACAAGGACATATACACTAGATG 58.796 37.037 0.00 0.00 37.44 2.90
1535 2007 5.171476 ACGTAATTCCTGTCTGTCATCAAG 58.829 41.667 0.00 0.00 0.00 3.02
1645 2204 6.072673 ACGAATCAACCCTGTAAAGTTCATTC 60.073 38.462 0.00 0.00 32.16 2.67
1785 2354 4.851014 TGTTTGAAAAGCTGATATTTCGCG 59.149 37.500 0.00 0.00 38.16 5.87
2267 2855 2.614969 AGCTGGAGGATGCCCCAA 60.615 61.111 0.00 0.00 37.41 4.12
2644 3361 7.870588 GAAGAACATTGTCTTCGTACTACTT 57.129 36.000 10.92 0.00 42.97 2.24
2702 3419 6.228273 TGACAATTGATCGAGTGAAAGAAC 57.772 37.500 17.08 2.58 0.00 3.01
2709 3426 2.032550 GGCCATGACAATTGATCGAGTG 59.967 50.000 13.59 8.86 0.00 3.51
2945 3696 3.502211 ACAGAGCTAATTTTGGTTCACCG 59.498 43.478 0.00 0.00 39.43 4.94
2953 3705 8.976986 AGCATAAAAGAACAGAGCTAATTTTG 57.023 30.769 0.00 0.00 0.00 2.44
3143 3898 0.855349 CTTGCCTTATAGCTGCGACG 59.145 55.000 0.00 0.00 0.00 5.12
3245 4005 4.631813 CCTTCAAGTATAACAGAGTGCACC 59.368 45.833 14.63 5.12 0.00 5.01
3958 5294 4.406456 TGCTTGCCTTCTTTCCTATTTGA 58.594 39.130 0.00 0.00 0.00 2.69
4174 5510 2.339556 GCATGGGCCTGCAACGTTA 61.340 57.895 18.99 0.00 41.87 3.18
4310 5646 4.908601 TGCTATCCTCAGGTTTTGAAGA 57.091 40.909 0.00 0.00 34.81 2.87
4342 5678 3.004734 CCTCAGGTTTTGAAGCATTTCGT 59.995 43.478 0.00 0.00 36.04 3.85
4405 5843 3.495753 CCTCAGGTTTTGAAGCATTTTGC 59.504 43.478 0.00 0.00 45.46 3.68
4407 5845 5.813513 ATCCTCAGGTTTTGAAGCATTTT 57.186 34.783 0.00 0.00 34.81 1.82
4459 5912 3.577313 GCATTTCGCTCCTCGGGC 61.577 66.667 0.00 0.00 39.05 6.13
4478 5931 0.889186 TTTCACTCCTCGGGCTTTGC 60.889 55.000 0.00 0.00 0.00 3.68
4487 5940 5.444663 AGTTTTGAAGCATTTCACTCCTC 57.555 39.130 0.00 0.00 42.79 3.71
4817 6274 7.443259 AATTGATCAAAGGAATGGCAAAAAG 57.557 32.000 13.09 0.00 0.00 2.27
4838 6295 3.790126 AGAACCAAACAGCCCCATAATT 58.210 40.909 0.00 0.00 0.00 1.40
4845 6302 0.673985 GGACAAGAACCAAACAGCCC 59.326 55.000 0.00 0.00 0.00 5.19
4846 6303 1.609072 GAGGACAAGAACCAAACAGCC 59.391 52.381 0.00 0.00 0.00 4.85
4847 6304 2.297701 TGAGGACAAGAACCAAACAGC 58.702 47.619 0.00 0.00 0.00 4.40
4870 6327 1.403249 CCTTCAGGCGAGGCAAATTTG 60.403 52.381 14.03 14.03 0.00 2.32
4871 6328 0.890683 CCTTCAGGCGAGGCAAATTT 59.109 50.000 0.00 0.00 0.00 1.82
4872 6329 0.251341 ACCTTCAGGCGAGGCAAATT 60.251 50.000 0.00 0.00 37.84 1.82
4873 6330 0.251341 AACCTTCAGGCGAGGCAAAT 60.251 50.000 0.00 0.00 37.84 2.32
4874 6331 0.889186 GAACCTTCAGGCGAGGCAAA 60.889 55.000 0.00 0.00 37.84 3.68
4875 6332 1.302511 GAACCTTCAGGCGAGGCAA 60.303 57.895 0.00 0.00 37.84 4.52
4876 6333 2.347490 GAACCTTCAGGCGAGGCA 59.653 61.111 0.00 0.00 37.84 4.75
4877 6334 2.436824 GGAACCTTCAGGCGAGGC 60.437 66.667 4.80 0.00 37.84 4.70
4890 6347 0.179936 CCAGGCAGATCTCAGGGAAC 59.820 60.000 0.00 0.00 0.00 3.62
4891 6348 0.043183 TCCAGGCAGATCTCAGGGAA 59.957 55.000 0.00 0.00 0.00 3.97
4892 6349 0.689080 GTCCAGGCAGATCTCAGGGA 60.689 60.000 0.00 0.00 0.00 4.20
4893 6350 0.690411 AGTCCAGGCAGATCTCAGGG 60.690 60.000 0.00 0.00 0.00 4.45
4894 6351 0.752054 GAGTCCAGGCAGATCTCAGG 59.248 60.000 0.00 0.00 0.00 3.86
4895 6352 1.409790 CAGAGTCCAGGCAGATCTCAG 59.590 57.143 0.00 0.00 0.00 3.35
4896 6353 1.272928 ACAGAGTCCAGGCAGATCTCA 60.273 52.381 0.00 0.00 0.00 3.27
4897 6354 1.484038 ACAGAGTCCAGGCAGATCTC 58.516 55.000 0.00 0.00 0.00 2.75
4898 6355 1.949799 AACAGAGTCCAGGCAGATCT 58.050 50.000 0.00 0.00 0.00 2.75
4899 6356 2.354259 CAAACAGAGTCCAGGCAGATC 58.646 52.381 0.00 0.00 0.00 2.75
4900 6357 1.004044 CCAAACAGAGTCCAGGCAGAT 59.996 52.381 0.00 0.00 0.00 2.90
4901 6358 0.397941 CCAAACAGAGTCCAGGCAGA 59.602 55.000 0.00 0.00 0.00 4.26
4902 6359 0.109342 ACCAAACAGAGTCCAGGCAG 59.891 55.000 0.00 0.00 0.00 4.85
4903 6360 0.550914 AACCAAACAGAGTCCAGGCA 59.449 50.000 0.00 0.00 0.00 4.75
4904 6361 0.954452 CAACCAAACAGAGTCCAGGC 59.046 55.000 0.00 0.00 0.00 4.85
4905 6362 1.609208 CCAACCAAACAGAGTCCAGG 58.391 55.000 0.00 0.00 0.00 4.45
4906 6363 0.954452 GCCAACCAAACAGAGTCCAG 59.046 55.000 0.00 0.00 0.00 3.86
4907 6364 0.817634 CGCCAACCAAACAGAGTCCA 60.818 55.000 0.00 0.00 0.00 4.02
4908 6365 1.949257 CGCCAACCAAACAGAGTCC 59.051 57.895 0.00 0.00 0.00 3.85
4909 6366 1.282875 GCGCCAACCAAACAGAGTC 59.717 57.895 0.00 0.00 0.00 3.36
4910 6367 2.193536 GGCGCCAACCAAACAGAGT 61.194 57.895 24.80 0.00 0.00 3.24
4911 6368 1.898574 AGGCGCCAACCAAACAGAG 60.899 57.895 31.54 0.00 0.00 3.35
4912 6369 2.192861 CAGGCGCCAACCAAACAGA 61.193 57.895 31.54 0.00 0.00 3.41
4913 6370 1.169661 TACAGGCGCCAACCAAACAG 61.170 55.000 31.54 8.64 0.00 3.16
4914 6371 0.538516 ATACAGGCGCCAACCAAACA 60.539 50.000 31.54 4.49 0.00 2.83
4915 6372 1.131693 GTATACAGGCGCCAACCAAAC 59.868 52.381 31.54 15.30 0.00 2.93
4916 6373 1.003812 AGTATACAGGCGCCAACCAAA 59.996 47.619 31.54 7.86 0.00 3.28
4917 6374 0.616371 AGTATACAGGCGCCAACCAA 59.384 50.000 31.54 9.48 0.00 3.67
4918 6375 0.177141 GAGTATACAGGCGCCAACCA 59.823 55.000 31.54 11.14 0.00 3.67
4919 6376 0.874607 CGAGTATACAGGCGCCAACC 60.875 60.000 31.54 9.84 0.00 3.77
4920 6377 0.101759 TCGAGTATACAGGCGCCAAC 59.898 55.000 31.54 17.56 0.00 3.77
4921 6378 0.818938 TTCGAGTATACAGGCGCCAA 59.181 50.000 31.54 14.46 0.00 4.52
4922 6379 0.384309 CTTCGAGTATACAGGCGCCA 59.616 55.000 31.54 8.70 0.00 5.69
4923 6380 0.940047 GCTTCGAGTATACAGGCGCC 60.940 60.000 21.89 21.89 0.00 6.53
4924 6381 0.030908 AGCTTCGAGTATACAGGCGC 59.969 55.000 5.50 0.00 0.00 6.53
4925 6382 2.666069 GCTAGCTTCGAGTATACAGGCG 60.666 54.545 7.70 6.10 0.00 5.52
4926 6383 2.351932 GGCTAGCTTCGAGTATACAGGC 60.352 54.545 15.72 0.00 0.00 4.85
4927 6384 3.057876 CAGGCTAGCTTCGAGTATACAGG 60.058 52.174 15.72 0.00 0.00 4.00
4928 6385 3.057876 CCAGGCTAGCTTCGAGTATACAG 60.058 52.174 15.72 0.00 0.00 2.74
4929 6386 2.885266 CCAGGCTAGCTTCGAGTATACA 59.115 50.000 15.72 0.00 0.00 2.29
4930 6387 2.351932 GCCAGGCTAGCTTCGAGTATAC 60.352 54.545 15.72 0.00 0.00 1.47
4931 6388 1.887198 GCCAGGCTAGCTTCGAGTATA 59.113 52.381 15.72 0.00 0.00 1.47
4932 6389 0.676736 GCCAGGCTAGCTTCGAGTAT 59.323 55.000 15.72 0.00 0.00 2.12
4933 6390 1.392710 GGCCAGGCTAGCTTCGAGTA 61.393 60.000 15.72 0.00 0.00 2.59
4934 6391 2.726351 GGCCAGGCTAGCTTCGAGT 61.726 63.158 15.72 0.00 0.00 4.18
4935 6392 2.107953 GGCCAGGCTAGCTTCGAG 59.892 66.667 15.72 0.00 0.00 4.04
4936 6393 2.364317 AGGCCAGGCTAGCTTCGA 60.364 61.111 15.72 0.00 0.00 3.71
4937 6394 2.202987 CAGGCCAGGCTAGCTTCG 60.203 66.667 15.72 0.00 0.00 3.79
4938 6395 2.191641 CCAGGCCAGGCTAGCTTC 59.808 66.667 15.72 0.00 0.00 3.86
4939 6396 3.415087 CCCAGGCCAGGCTAGCTT 61.415 66.667 15.72 3.40 0.00 3.74
4940 6397 3.950861 TTCCCAGGCCAGGCTAGCT 62.951 63.158 15.72 0.00 0.00 3.32
4941 6398 2.290021 AATTCCCAGGCCAGGCTAGC 62.290 60.000 12.43 6.04 0.00 3.42
4942 6399 0.259938 AAATTCCCAGGCCAGGCTAG 59.740 55.000 12.43 3.88 0.00 3.42
4943 6400 1.602440 TAAATTCCCAGGCCAGGCTA 58.398 50.000 12.43 0.00 0.00 3.93
4944 6401 0.709992 TTAAATTCCCAGGCCAGGCT 59.290 50.000 12.43 0.00 0.00 4.58
4945 6402 1.567357 TTTAAATTCCCAGGCCAGGC 58.433 50.000 9.12 1.26 0.00 4.85
4946 6403 2.093500 GCTTTTAAATTCCCAGGCCAGG 60.093 50.000 7.34 7.34 0.00 4.45
4947 6404 2.566724 TGCTTTTAAATTCCCAGGCCAG 59.433 45.455 5.01 0.00 0.00 4.85
4948 6405 2.614259 TGCTTTTAAATTCCCAGGCCA 58.386 42.857 5.01 0.00 0.00 5.36
4949 6406 3.197549 TGATGCTTTTAAATTCCCAGGCC 59.802 43.478 0.00 0.00 0.00 5.19
4950 6407 4.470334 TGATGCTTTTAAATTCCCAGGC 57.530 40.909 0.00 0.00 0.00 4.85
4951 6408 6.703165 GCTAATGATGCTTTTAAATTCCCAGG 59.297 38.462 0.00 0.00 0.00 4.45
4952 6409 6.703165 GGCTAATGATGCTTTTAAATTCCCAG 59.297 38.462 0.00 0.00 0.00 4.45
4953 6410 6.383726 AGGCTAATGATGCTTTTAAATTCCCA 59.616 34.615 0.00 0.00 0.00 4.37
4954 6411 6.703165 CAGGCTAATGATGCTTTTAAATTCCC 59.297 38.462 0.00 0.00 0.00 3.97
4955 6412 6.201615 GCAGGCTAATGATGCTTTTAAATTCC 59.798 38.462 0.00 0.00 37.00 3.01
4956 6413 6.201615 GGCAGGCTAATGATGCTTTTAAATTC 59.798 38.462 0.00 0.00 39.88 2.17
4957 6414 6.051074 GGCAGGCTAATGATGCTTTTAAATT 58.949 36.000 0.00 0.00 39.88 1.82
4958 6415 5.364735 AGGCAGGCTAATGATGCTTTTAAAT 59.635 36.000 0.00 0.00 39.88 1.40
4959 6416 4.711355 AGGCAGGCTAATGATGCTTTTAAA 59.289 37.500 0.00 0.00 39.88 1.52
4960 6417 4.280819 AGGCAGGCTAATGATGCTTTTAA 58.719 39.130 0.00 0.00 39.88 1.52
4961 6418 3.902218 AGGCAGGCTAATGATGCTTTTA 58.098 40.909 0.00 0.00 39.88 1.52
4962 6419 2.743553 AGGCAGGCTAATGATGCTTTT 58.256 42.857 0.00 0.00 39.88 2.27
4963 6420 2.429610 CAAGGCAGGCTAATGATGCTTT 59.570 45.455 0.00 0.00 39.50 3.51
4964 6421 2.029623 CAAGGCAGGCTAATGATGCTT 58.970 47.619 0.00 0.00 39.88 3.91
4965 6422 1.688772 CAAGGCAGGCTAATGATGCT 58.311 50.000 0.00 0.00 39.88 3.79
4966 6423 0.672342 CCAAGGCAGGCTAATGATGC 59.328 55.000 0.00 0.00 39.25 3.91
4967 6424 2.353357 TCCAAGGCAGGCTAATGATG 57.647 50.000 0.00 0.00 0.00 3.07
4968 6425 3.026694 GTTTCCAAGGCAGGCTAATGAT 58.973 45.455 0.00 0.00 0.00 2.45
4969 6426 2.446435 GTTTCCAAGGCAGGCTAATGA 58.554 47.619 0.00 0.00 0.00 2.57
4970 6427 1.478105 GGTTTCCAAGGCAGGCTAATG 59.522 52.381 0.00 0.00 0.00 1.90
4971 6428 1.852633 GGTTTCCAAGGCAGGCTAAT 58.147 50.000 0.00 0.00 0.00 1.73
4972 6429 0.608035 CGGTTTCCAAGGCAGGCTAA 60.608 55.000 0.00 0.00 0.00 3.09
4973 6430 1.002624 CGGTTTCCAAGGCAGGCTA 60.003 57.895 0.00 0.00 0.00 3.93
4974 6431 2.282462 CGGTTTCCAAGGCAGGCT 60.282 61.111 0.00 0.00 0.00 4.58
4975 6432 1.866853 CTTCGGTTTCCAAGGCAGGC 61.867 60.000 0.00 0.00 0.00 4.85
4976 6433 0.250727 TCTTCGGTTTCCAAGGCAGG 60.251 55.000 0.00 0.00 0.00 4.85
4977 6434 1.604604 TTCTTCGGTTTCCAAGGCAG 58.395 50.000 0.00 0.00 0.00 4.85
4978 6435 1.885887 CATTCTTCGGTTTCCAAGGCA 59.114 47.619 0.00 0.00 0.00 4.75
4979 6436 1.886542 ACATTCTTCGGTTTCCAAGGC 59.113 47.619 0.00 0.00 0.00 4.35
4980 6437 3.058224 GTGACATTCTTCGGTTTCCAAGG 60.058 47.826 0.00 0.00 0.00 3.61
4981 6438 3.815401 AGTGACATTCTTCGGTTTCCAAG 59.185 43.478 0.00 0.00 0.00 3.61
4982 6439 3.815809 AGTGACATTCTTCGGTTTCCAA 58.184 40.909 0.00 0.00 0.00 3.53
4983 6440 3.485463 AGTGACATTCTTCGGTTTCCA 57.515 42.857 0.00 0.00 0.00 3.53
4984 6441 3.371285 GCTAGTGACATTCTTCGGTTTCC 59.629 47.826 0.00 0.00 0.00 3.13
4985 6442 3.371285 GGCTAGTGACATTCTTCGGTTTC 59.629 47.826 0.00 0.00 0.00 2.78
4986 6443 3.008049 AGGCTAGTGACATTCTTCGGTTT 59.992 43.478 0.00 0.00 0.00 3.27
4987 6444 2.567615 AGGCTAGTGACATTCTTCGGTT 59.432 45.455 0.00 0.00 0.00 4.44
4988 6445 2.093973 CAGGCTAGTGACATTCTTCGGT 60.094 50.000 0.00 0.00 0.00 4.69
4989 6446 2.544685 CAGGCTAGTGACATTCTTCGG 58.455 52.381 0.00 0.00 0.00 4.30
4990 6447 2.544685 CCAGGCTAGTGACATTCTTCG 58.455 52.381 0.00 0.00 0.00 3.79
4991 6448 2.911484 CCCAGGCTAGTGACATTCTTC 58.089 52.381 0.00 0.00 0.00 2.87
4992 6449 1.065126 GCCCAGGCTAGTGACATTCTT 60.065 52.381 0.08 0.00 38.26 2.52
4993 6450 0.543749 GCCCAGGCTAGTGACATTCT 59.456 55.000 0.08 0.00 38.26 2.40
4994 6451 0.464554 GGCCCAGGCTAGTGACATTC 60.465 60.000 8.89 0.00 41.60 2.67
4995 6452 1.207488 TGGCCCAGGCTAGTGACATT 61.207 55.000 8.89 0.00 41.60 2.71
4996 6453 1.616327 TGGCCCAGGCTAGTGACAT 60.616 57.895 8.89 0.00 41.60 3.06
4997 6454 2.203922 TGGCCCAGGCTAGTGACA 60.204 61.111 8.89 0.00 41.60 3.58
4998 6455 2.586792 CTGGCCCAGGCTAGTGAC 59.413 66.667 13.54 0.00 43.39 3.67
4999 6456 2.688666 CCTGGCCCAGGCTAGTGA 60.689 66.667 18.86 0.00 45.13 3.41
5007 6464 4.659172 TTCGGTTGCCTGGCCCAG 62.659 66.667 17.53 2.91 0.00 4.45
5008 6465 3.740495 TTTTCGGTTGCCTGGCCCA 62.740 57.895 17.53 0.00 0.00 5.36
5009 6466 2.434658 CTTTTTCGGTTGCCTGGCCC 62.435 60.000 17.53 10.17 0.00 5.80
5010 6467 1.006220 CTTTTTCGGTTGCCTGGCC 60.006 57.895 17.53 0.00 0.00 5.36
5011 6468 1.006220 CCTTTTTCGGTTGCCTGGC 60.006 57.895 12.87 12.87 0.00 4.85
5012 6469 0.313987 GTCCTTTTTCGGTTGCCTGG 59.686 55.000 0.00 0.00 0.00 4.45
5013 6470 0.040425 CGTCCTTTTTCGGTTGCCTG 60.040 55.000 0.00 0.00 0.00 4.85
5014 6471 1.792118 GCGTCCTTTTTCGGTTGCCT 61.792 55.000 0.00 0.00 0.00 4.75
5015 6472 1.371267 GCGTCCTTTTTCGGTTGCC 60.371 57.895 0.00 0.00 0.00 4.52
5016 6473 1.371267 GGCGTCCTTTTTCGGTTGC 60.371 57.895 0.00 0.00 0.00 4.17
5017 6474 0.040425 CAGGCGTCCTTTTTCGGTTG 60.040 55.000 0.00 0.00 0.00 3.77
5018 6475 1.170290 CCAGGCGTCCTTTTTCGGTT 61.170 55.000 0.00 0.00 0.00 4.44
5019 6476 1.599797 CCAGGCGTCCTTTTTCGGT 60.600 57.895 0.00 0.00 0.00 4.69
5020 6477 2.332654 CCCAGGCGTCCTTTTTCGG 61.333 63.158 0.00 0.00 0.00 4.30
5021 6478 1.599797 ACCCAGGCGTCCTTTTTCG 60.600 57.895 0.00 0.00 0.00 3.46
5022 6479 1.956802 CACCCAGGCGTCCTTTTTC 59.043 57.895 0.00 0.00 0.00 2.29
5023 6480 2.200337 GCACCCAGGCGTCCTTTTT 61.200 57.895 0.00 0.00 0.00 1.94
5024 6481 2.597510 GCACCCAGGCGTCCTTTT 60.598 61.111 0.00 0.00 0.00 2.27
5025 6482 3.570212 AGCACCCAGGCGTCCTTT 61.570 61.111 0.00 0.00 39.27 3.11
5026 6483 4.335647 CAGCACCCAGGCGTCCTT 62.336 66.667 0.00 0.00 39.27 3.36
5033 6490 2.207501 ATTCTCAGGCAGCACCCAGG 62.208 60.000 0.00 0.00 40.58 4.45
5034 6491 1.030488 CATTCTCAGGCAGCACCCAG 61.030 60.000 0.00 0.00 40.58 4.45
5035 6492 1.001764 CATTCTCAGGCAGCACCCA 60.002 57.895 0.00 0.00 40.58 4.51
5036 6493 2.413142 GCATTCTCAGGCAGCACCC 61.413 63.158 0.00 0.00 40.58 4.61
5037 6494 0.107508 TAGCATTCTCAGGCAGCACC 60.108 55.000 0.00 0.00 39.61 5.01
5038 6495 1.742761 TTAGCATTCTCAGGCAGCAC 58.257 50.000 0.00 0.00 0.00 4.40
5039 6496 2.086869 GTTTAGCATTCTCAGGCAGCA 58.913 47.619 0.00 0.00 0.00 4.41
5040 6497 2.086869 TGTTTAGCATTCTCAGGCAGC 58.913 47.619 0.00 0.00 0.00 5.25
5041 6498 3.488721 GCATGTTTAGCATTCTCAGGCAG 60.489 47.826 0.00 0.00 35.19 4.85
5042 6499 2.424601 GCATGTTTAGCATTCTCAGGCA 59.575 45.455 0.00 0.00 35.19 4.75
5043 6500 2.424601 TGCATGTTTAGCATTCTCAGGC 59.575 45.455 0.00 0.00 37.02 4.85
5053 6510 3.691118 TCCTTCTCACATGCATGTTTAGC 59.309 43.478 29.48 0.00 39.39 3.09
5054 6511 5.885230 TTCCTTCTCACATGCATGTTTAG 57.115 39.130 29.48 26.21 39.39 1.85
5055 6512 6.489700 TCTTTTCCTTCTCACATGCATGTTTA 59.510 34.615 29.48 18.85 39.39 2.01
5056 6513 5.302568 TCTTTTCCTTCTCACATGCATGTTT 59.697 36.000 29.48 6.81 39.39 2.83
5057 6514 4.828939 TCTTTTCCTTCTCACATGCATGTT 59.171 37.500 29.48 12.46 39.39 2.71
5058 6515 4.217118 GTCTTTTCCTTCTCACATGCATGT 59.783 41.667 26.61 26.61 42.84 3.21
5059 6516 4.216902 TGTCTTTTCCTTCTCACATGCATG 59.783 41.667 25.09 25.09 0.00 4.06
5060 6517 4.217118 GTGTCTTTTCCTTCTCACATGCAT 59.783 41.667 0.00 0.00 0.00 3.96
5061 6518 3.565482 GTGTCTTTTCCTTCTCACATGCA 59.435 43.478 0.00 0.00 0.00 3.96
5062 6519 3.057946 GGTGTCTTTTCCTTCTCACATGC 60.058 47.826 0.00 0.00 0.00 4.06
5063 6520 4.392940 AGGTGTCTTTTCCTTCTCACATG 58.607 43.478 0.00 0.00 0.00 3.21
5064 6521 4.713792 AGGTGTCTTTTCCTTCTCACAT 57.286 40.909 0.00 0.00 0.00 3.21
5065 6522 5.623956 TTAGGTGTCTTTTCCTTCTCACA 57.376 39.130 0.00 0.00 35.51 3.58
5066 6523 6.819146 CCTATTAGGTGTCTTTTCCTTCTCAC 59.181 42.308 1.17 0.00 35.51 3.51
5067 6524 6.576442 GCCTATTAGGTGTCTTTTCCTTCTCA 60.576 42.308 11.38 0.00 37.80 3.27
5068 6525 5.818336 GCCTATTAGGTGTCTTTTCCTTCTC 59.182 44.000 11.38 0.00 37.80 2.87
5069 6526 5.489278 AGCCTATTAGGTGTCTTTTCCTTCT 59.511 40.000 11.38 0.00 37.80 2.85
5070 6527 5.586643 CAGCCTATTAGGTGTCTTTTCCTTC 59.413 44.000 11.38 0.00 37.80 3.46
5071 6528 5.250774 TCAGCCTATTAGGTGTCTTTTCCTT 59.749 40.000 11.38 0.00 37.80 3.36
5072 6529 4.783227 TCAGCCTATTAGGTGTCTTTTCCT 59.217 41.667 11.38 0.00 37.80 3.36
5073 6530 5.099042 TCAGCCTATTAGGTGTCTTTTCC 57.901 43.478 11.38 0.00 37.80 3.13
5074 6531 6.037610 CACATCAGCCTATTAGGTGTCTTTTC 59.962 42.308 11.38 0.00 37.80 2.29
5075 6532 5.882557 CACATCAGCCTATTAGGTGTCTTTT 59.117 40.000 11.38 0.00 37.80 2.27
5076 6533 5.189736 TCACATCAGCCTATTAGGTGTCTTT 59.810 40.000 11.38 0.00 37.80 2.52
5077 6534 4.716784 TCACATCAGCCTATTAGGTGTCTT 59.283 41.667 11.38 0.00 37.80 3.01
5078 6535 4.100189 GTCACATCAGCCTATTAGGTGTCT 59.900 45.833 11.38 0.00 37.80 3.41
5079 6536 4.141937 TGTCACATCAGCCTATTAGGTGTC 60.142 45.833 11.38 0.03 37.80 3.67
5080 6537 3.774766 TGTCACATCAGCCTATTAGGTGT 59.225 43.478 11.38 4.94 37.80 4.16
5081 6538 4.406648 TGTCACATCAGCCTATTAGGTG 57.593 45.455 11.38 8.38 37.80 4.00
5082 6539 4.904251 AGATGTCACATCAGCCTATTAGGT 59.096 41.667 20.13 0.00 37.80 3.08
5083 6540 5.480642 AGATGTCACATCAGCCTATTAGG 57.519 43.478 20.13 5.28 38.80 2.69
5084 6541 7.459795 TCTAGATGTCACATCAGCCTATTAG 57.540 40.000 20.13 10.43 0.00 1.73
5085 6542 7.839680 TTCTAGATGTCACATCAGCCTATTA 57.160 36.000 20.13 0.88 0.00 0.98
5086 6543 6.737720 TTCTAGATGTCACATCAGCCTATT 57.262 37.500 20.13 0.00 0.00 1.73
5087 6544 6.070881 GGATTCTAGATGTCACATCAGCCTAT 60.071 42.308 20.13 6.38 0.00 2.57
5088 6545 5.244851 GGATTCTAGATGTCACATCAGCCTA 59.755 44.000 20.13 2.65 0.00 3.93
5089 6546 4.040217 GGATTCTAGATGTCACATCAGCCT 59.960 45.833 20.13 1.49 0.00 4.58
5090 6547 4.202295 TGGATTCTAGATGTCACATCAGCC 60.202 45.833 20.13 11.40 0.00 4.85
5091 6548 4.749099 GTGGATTCTAGATGTCACATCAGC 59.251 45.833 20.13 1.55 0.00 4.26
5092 6549 5.910614 TGTGGATTCTAGATGTCACATCAG 58.089 41.667 20.13 14.14 31.33 2.90
5093 6550 5.937975 TGTGGATTCTAGATGTCACATCA 57.062 39.130 20.13 5.28 31.33 3.07
5094 6551 5.525378 GGTTGTGGATTCTAGATGTCACATC 59.475 44.000 10.05 10.05 35.48 3.06
5095 6552 5.045651 TGGTTGTGGATTCTAGATGTCACAT 60.046 40.000 17.42 0.00 35.48 3.21
5096 6553 4.285775 TGGTTGTGGATTCTAGATGTCACA 59.714 41.667 14.53 14.53 33.97 3.58
5097 6554 4.832248 TGGTTGTGGATTCTAGATGTCAC 58.168 43.478 0.00 3.29 0.00 3.67
5098 6555 4.080919 CCTGGTTGTGGATTCTAGATGTCA 60.081 45.833 0.00 0.00 0.00 3.58
5099 6556 4.446371 CCTGGTTGTGGATTCTAGATGTC 58.554 47.826 0.00 0.00 0.00 3.06
5100 6557 3.370953 GCCTGGTTGTGGATTCTAGATGT 60.371 47.826 0.00 0.00 0.00 3.06
5101 6558 3.209410 GCCTGGTTGTGGATTCTAGATG 58.791 50.000 0.00 0.00 0.00 2.90
5102 6559 2.158900 CGCCTGGTTGTGGATTCTAGAT 60.159 50.000 0.00 0.00 0.00 1.98
5103 6560 1.207089 CGCCTGGTTGTGGATTCTAGA 59.793 52.381 0.00 0.00 0.00 2.43
5104 6561 1.066143 ACGCCTGGTTGTGGATTCTAG 60.066 52.381 0.00 0.00 0.00 2.43
5105 6562 0.981183 ACGCCTGGTTGTGGATTCTA 59.019 50.000 0.00 0.00 0.00 2.10
5106 6563 0.606401 CACGCCTGGTTGTGGATTCT 60.606 55.000 11.81 0.00 32.47 2.40
5107 6564 1.875963 CACGCCTGGTTGTGGATTC 59.124 57.895 11.81 0.00 32.47 2.52
5108 6565 4.079446 CACGCCTGGTTGTGGATT 57.921 55.556 11.81 0.00 32.47 3.01
5123 6580 0.238289 CATGTTTGGCTCGTGACCAC 59.762 55.000 1.01 0.00 36.76 4.16
5124 6581 0.888736 CCATGTTTGGCTCGTGACCA 60.889 55.000 0.00 0.00 35.85 4.02
5125 6582 1.875963 CCATGTTTGGCTCGTGACC 59.124 57.895 0.00 0.00 35.85 4.02
5134 6591 1.294138 CCAGGCAAGCCATGTTTGG 59.706 57.895 14.40 7.86 46.66 3.28
5135 6592 1.375013 GCCAGGCAAGCCATGTTTG 60.375 57.895 14.40 2.03 38.92 2.93
5136 6593 3.062639 GCCAGGCAAGCCATGTTT 58.937 55.556 14.40 0.00 38.92 2.83
5149 6606 1.364901 CAGTTTTGTGCCTGGCCAG 59.635 57.895 26.87 26.87 0.00 4.85
5150 6607 2.795110 GCAGTTTTGTGCCTGGCCA 61.795 57.895 17.53 4.71 37.49 5.36
5151 6608 2.029518 GCAGTTTTGTGCCTGGCC 59.970 61.111 17.53 8.23 37.49 5.36
5152 6609 1.592400 GTGCAGTTTTGTGCCTGGC 60.592 57.895 12.87 12.87 43.28 4.85
5153 6610 1.067916 GGTGCAGTTTTGTGCCTGG 59.932 57.895 0.00 0.00 43.28 4.45
5154 6611 0.390124 ATGGTGCAGTTTTGTGCCTG 59.610 50.000 0.00 0.00 43.28 4.85
5155 6612 0.675633 GATGGTGCAGTTTTGTGCCT 59.324 50.000 0.00 0.00 43.28 4.75
5156 6613 0.319813 GGATGGTGCAGTTTTGTGCC 60.320 55.000 0.00 0.00 43.28 5.01
5157 6614 0.319813 GGGATGGTGCAGTTTTGTGC 60.320 55.000 0.00 0.00 44.27 4.57
5158 6615 1.000060 CTGGGATGGTGCAGTTTTGTG 60.000 52.381 0.00 0.00 0.00 3.33
5159 6616 1.331214 CTGGGATGGTGCAGTTTTGT 58.669 50.000 0.00 0.00 0.00 2.83
5160 6617 0.604578 CCTGGGATGGTGCAGTTTTG 59.395 55.000 0.00 0.00 0.00 2.44
5161 6618 1.187567 GCCTGGGATGGTGCAGTTTT 61.188 55.000 0.00 0.00 0.00 2.43
5162 6619 1.607467 GCCTGGGATGGTGCAGTTT 60.607 57.895 0.00 0.00 0.00 2.66
5163 6620 2.036256 GCCTGGGATGGTGCAGTT 59.964 61.111 0.00 0.00 0.00 3.16
5164 6621 4.415150 CGCCTGGGATGGTGCAGT 62.415 66.667 0.00 0.00 0.00 4.40
5165 6622 4.415150 ACGCCTGGGATGGTGCAG 62.415 66.667 0.00 0.00 41.02 4.41
5166 6623 4.720902 CACGCCTGGGATGGTGCA 62.721 66.667 0.00 0.00 41.02 4.57
5167 6624 4.408821 TCACGCCTGGGATGGTGC 62.409 66.667 0.00 0.00 41.02 5.01
5168 6625 2.124983 CTCACGCCTGGGATGGTG 60.125 66.667 0.00 0.00 42.85 4.17
5169 6626 4.101448 GCTCACGCCTGGGATGGT 62.101 66.667 0.00 0.00 0.00 3.55
5185 6642 0.179137 GGTAAATTTGAGCGCCTGGC 60.179 55.000 9.11 9.11 44.05 4.85
5186 6643 1.133025 CTGGTAAATTTGAGCGCCTGG 59.867 52.381 2.29 0.00 0.00 4.45
5187 6644 1.133025 CCTGGTAAATTTGAGCGCCTG 59.867 52.381 2.29 0.41 0.00 4.85
5188 6645 1.463674 CCTGGTAAATTTGAGCGCCT 58.536 50.000 2.29 0.00 0.00 5.52
5189 6646 0.179137 GCCTGGTAAATTTGAGCGCC 60.179 55.000 2.29 0.00 0.00 6.53
5190 6647 0.525761 TGCCTGGTAAATTTGAGCGC 59.474 50.000 0.00 0.00 0.00 5.92
5191 6648 1.465689 CGTGCCTGGTAAATTTGAGCG 60.466 52.381 0.00 0.00 0.00 5.03
5192 6649 1.732405 GCGTGCCTGGTAAATTTGAGC 60.732 52.381 0.00 0.00 0.00 4.26
5193 6650 1.812571 AGCGTGCCTGGTAAATTTGAG 59.187 47.619 0.00 0.00 0.00 3.02
5194 6651 1.539388 CAGCGTGCCTGGTAAATTTGA 59.461 47.619 0.00 0.00 37.93 2.69
5195 6652 1.269448 ACAGCGTGCCTGGTAAATTTG 59.731 47.619 0.00 0.00 46.14 2.32
5196 6653 1.539827 GACAGCGTGCCTGGTAAATTT 59.460 47.619 0.00 0.00 46.14 1.82
5197 6654 1.165270 GACAGCGTGCCTGGTAAATT 58.835 50.000 0.00 0.00 46.14 1.82
5198 6655 0.676782 GGACAGCGTGCCTGGTAAAT 60.677 55.000 0.00 0.00 46.14 1.40
5199 6656 1.302192 GGACAGCGTGCCTGGTAAA 60.302 57.895 0.00 0.00 46.14 2.01
5200 6657 2.345991 GGACAGCGTGCCTGGTAA 59.654 61.111 0.00 0.00 46.14 2.85
5201 6658 2.920384 TGGACAGCGTGCCTGGTA 60.920 61.111 0.00 0.00 46.14 3.25
5202 6659 4.320456 CTGGACAGCGTGCCTGGT 62.320 66.667 0.00 0.00 46.14 4.00
5205 6662 2.738213 CTTTCCTGGACAGCGTGCCT 62.738 60.000 0.00 0.00 0.00 4.75
5206 6663 2.281484 TTTCCTGGACAGCGTGCC 60.281 61.111 0.00 0.00 0.00 5.01
5207 6664 2.970974 GCTTTCCTGGACAGCGTGC 61.971 63.158 18.21 0.00 0.00 5.34
5208 6665 1.165907 TTGCTTTCCTGGACAGCGTG 61.166 55.000 25.15 0.00 38.09 5.34
5209 6666 1.148273 TTGCTTTCCTGGACAGCGT 59.852 52.632 25.15 0.00 38.09 5.07
5210 6667 1.576421 GTTGCTTTCCTGGACAGCG 59.424 57.895 25.15 3.81 38.09 5.18
5211 6668 0.823356 TGGTTGCTTTCCTGGACAGC 60.823 55.000 24.45 24.45 36.09 4.40
5212 6669 1.691196 TTGGTTGCTTTCCTGGACAG 58.309 50.000 5.47 5.47 0.00 3.51
5213 6670 1.754226 GTTTGGTTGCTTTCCTGGACA 59.246 47.619 0.00 0.00 0.00 4.02
5214 6671 2.031870 AGTTTGGTTGCTTTCCTGGAC 58.968 47.619 0.00 0.00 0.00 4.02
5215 6672 2.031120 CAGTTTGGTTGCTTTCCTGGA 58.969 47.619 0.00 0.00 0.00 3.86
5216 6673 1.538849 GCAGTTTGGTTGCTTTCCTGG 60.539 52.381 0.00 0.00 38.51 4.45
5217 6674 1.538849 GGCAGTTTGGTTGCTTTCCTG 60.539 52.381 0.00 0.00 41.27 3.86
5218 6675 0.752658 GGCAGTTTGGTTGCTTTCCT 59.247 50.000 0.00 0.00 41.27 3.36
5219 6676 0.249868 GGGCAGTTTGGTTGCTTTCC 60.250 55.000 0.00 0.00 41.27 3.13
5220 6677 0.249868 GGGGCAGTTTGGTTGCTTTC 60.250 55.000 0.00 0.00 41.27 2.62
5221 6678 0.690744 AGGGGCAGTTTGGTTGCTTT 60.691 50.000 0.00 0.00 41.27 3.51
5222 6679 0.187361 TAGGGGCAGTTTGGTTGCTT 59.813 50.000 0.00 0.00 41.27 3.91
5223 6680 0.409484 ATAGGGGCAGTTTGGTTGCT 59.591 50.000 0.00 0.00 41.27 3.91
5224 6681 0.532115 CATAGGGGCAGTTTGGTTGC 59.468 55.000 0.00 0.00 40.80 4.17
5225 6682 1.818674 GACATAGGGGCAGTTTGGTTG 59.181 52.381 0.00 0.00 0.00 3.77
5226 6683 1.272480 GGACATAGGGGCAGTTTGGTT 60.272 52.381 0.00 0.00 0.00 3.67
5227 6684 0.331616 GGACATAGGGGCAGTTTGGT 59.668 55.000 0.00 0.00 0.00 3.67
5228 6685 0.331278 TGGACATAGGGGCAGTTTGG 59.669 55.000 0.00 0.00 0.00 3.28
5229 6686 2.442236 ATGGACATAGGGGCAGTTTG 57.558 50.000 0.00 0.00 0.00 2.93
5230 6687 3.117888 CAGTATGGACATAGGGGCAGTTT 60.118 47.826 0.00 0.00 0.00 2.66
5231 6688 2.439507 CAGTATGGACATAGGGGCAGTT 59.560 50.000 0.00 0.00 0.00 3.16
5232 6689 2.050144 CAGTATGGACATAGGGGCAGT 58.950 52.381 0.00 0.00 0.00 4.40
5233 6690 2.329267 TCAGTATGGACATAGGGGCAG 58.671 52.381 0.00 0.00 36.16 4.85
5234 6691 2.487746 TCAGTATGGACATAGGGGCA 57.512 50.000 0.00 0.00 36.16 5.36
5235 6692 3.679389 CATTCAGTATGGACATAGGGGC 58.321 50.000 0.00 0.00 36.16 5.80
5236 6693 3.679389 GCATTCAGTATGGACATAGGGG 58.321 50.000 0.00 0.00 36.16 4.79
5237 6694 3.244215 ACGCATTCAGTATGGACATAGGG 60.244 47.826 0.00 0.00 36.16 3.53
5238 6695 3.995199 ACGCATTCAGTATGGACATAGG 58.005 45.455 0.00 0.00 36.16 2.57
5239 6696 5.991328 AAACGCATTCAGTATGGACATAG 57.009 39.130 0.00 0.00 36.16 2.23
5240 6697 7.041440 CCAATAAACGCATTCAGTATGGACATA 60.041 37.037 0.00 0.00 36.16 2.29
5241 6698 6.238731 CCAATAAACGCATTCAGTATGGACAT 60.239 38.462 0.00 0.00 36.16 3.06
5242 6699 5.065859 CCAATAAACGCATTCAGTATGGACA 59.934 40.000 0.00 0.00 36.16 4.02
5243 6700 5.065988 ACCAATAAACGCATTCAGTATGGAC 59.934 40.000 0.00 0.00 36.16 4.02
5250 6707 5.949735 AGGTTAACCAATAAACGCATTCAG 58.050 37.500 26.26 0.00 36.26 3.02
5427 6887 9.462606 AACCTAGAACTTCAATTATTTCGGAAT 57.537 29.630 0.00 0.00 0.00 3.01
5432 6892 9.841880 GGACAAACCTAGAACTTCAATTATTTC 57.158 33.333 0.00 0.00 35.41 2.17
5461 6921 7.954447 TGGTCAAAAATTTAACAAGTTTGACG 58.046 30.769 17.17 0.00 33.54 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.