Multiple sequence alignment - TraesCS6B01G263900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G263900 chr6B 100.000 7108 0 0 1 7108 475266967 475274074 0.000000e+00 13127.0
1 TraesCS6B01G263900 chr6B 84.264 197 29 2 38 232 275404668 275404864 2.620000e-44 191.0
2 TraesCS6B01G263900 chr6B 83.163 196 31 2 38 231 288285786 288285981 2.040000e-40 178.0
3 TraesCS6B01G263900 chr6B 100.000 30 0 0 2491 2520 32833413 32833384 1.000000e-03 56.5
4 TraesCS6B01G263900 chr6D 94.581 3451 113 20 268 3685 307876851 307880260 0.000000e+00 5269.0
5 TraesCS6B01G263900 chr6D 94.673 2947 70 29 4220 7108 307880946 307883863 0.000000e+00 4492.0
6 TraesCS6B01G263900 chr6D 89.216 510 19 10 3736 4225 307880262 307880755 7.890000e-169 604.0
7 TraesCS6B01G263900 chr6A 95.710 2634 73 13 4220 6834 445048029 445050641 0.000000e+00 4202.0
8 TraesCS6B01G263900 chr6A 96.737 1900 52 3 961 2850 445044647 445046546 0.000000e+00 3157.0
9 TraesCS6B01G263900 chr6A 92.184 806 38 5 2889 3685 445046542 445047331 0.000000e+00 1116.0
10 TraesCS6B01G263900 chr6A 91.576 641 23 9 256 886 445043750 445044369 0.000000e+00 856.0
11 TraesCS6B01G263900 chr6A 90.784 510 23 5 3736 4225 445047333 445047838 0.000000e+00 660.0
12 TraesCS6B01G263900 chr6A 86.452 155 10 6 6961 7108 445061072 445061222 7.380000e-35 159.0
13 TraesCS6B01G263900 chr6A 97.959 49 0 1 6832 6880 445060993 445061040 4.570000e-12 84.2
14 TraesCS6B01G263900 chr2A 86.124 209 28 1 39 246 1468088 1468296 2.580000e-54 224.0
15 TraesCS6B01G263900 chr2A 77.898 371 61 20 4409 4770 615740272 615739914 2.010000e-50 211.0
16 TraesCS6B01G263900 chr1D 85.714 210 29 1 38 246 92060598 92060389 3.340000e-53 220.0
17 TraesCS6B01G263900 chr1D 83.249 197 31 2 38 232 210060687 210060883 5.670000e-41 180.0
18 TraesCS6B01G263900 chr1D 100.000 44 0 0 3701 3744 176390157 176390114 1.640000e-11 82.4
19 TraesCS6B01G263900 chr2B 77.898 371 61 20 4409 4770 554455935 554455577 2.010000e-50 211.0
20 TraesCS6B01G263900 chr2B 94.118 51 3 0 3696 3746 695378403 695378453 2.130000e-10 78.7
21 TraesCS6B01G263900 chr2D 77.628 371 62 20 4409 4770 473716827 473716469 9.350000e-49 206.0
22 TraesCS6B01G263900 chr1B 84.772 197 27 3 38 232 508143060 508142865 2.020000e-45 195.0
23 TraesCS6B01G263900 chr7B 84.264 197 29 2 38 232 247939042 247938846 2.620000e-44 191.0
24 TraesCS6B01G263900 chr7B 85.556 90 10 2 2279 2365 468947278 468947367 2.730000e-14 91.6
25 TraesCS6B01G263900 chr5B 83.756 197 30 2 38 232 199935608 199935412 1.220000e-42 185.0
26 TraesCS6B01G263900 chr5B 97.872 47 0 1 3702 3747 429030655 429030701 5.910000e-11 80.5
27 TraesCS6B01G263900 chr5B 86.111 72 6 3 3703 3770 336799797 336799868 2.750000e-09 75.0
28 TraesCS6B01G263900 chr5A 83.673 196 31 1 38 232 150568306 150568111 4.380000e-42 183.0
29 TraesCS6B01G263900 chr3B 85.714 91 8 4 2279 2365 198130752 198130663 2.730000e-14 91.6
30 TraesCS6B01G263900 chr3D 100.000 45 0 0 3702 3746 457400828 457400872 4.570000e-12 84.2
31 TraesCS6B01G263900 chr3D 94.340 53 1 2 3702 3752 20348808 20348860 5.910000e-11 80.5
32 TraesCS6B01G263900 chr4A 97.872 47 1 0 3702 3748 58913194 58913240 1.640000e-11 82.4
33 TraesCS6B01G263900 chrUn 94.231 52 2 1 3702 3752 62663439 62663388 2.130000e-10 78.7
34 TraesCS6B01G263900 chr7A 94.118 51 3 0 3702 3752 33483230 33483180 2.130000e-10 78.7
35 TraesCS6B01G263900 chr1A 90.196 51 5 0 2474 2524 373311938 373311988 4.600000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G263900 chr6B 475266967 475274074 7107 False 13127.0 13127 100.000000 1 7108 1 chr6B.!!$F3 7107
1 TraesCS6B01G263900 chr6D 307876851 307883863 7012 False 3455.0 5269 92.823333 268 7108 3 chr6D.!!$F1 6840
2 TraesCS6B01G263900 chr6A 445043750 445050641 6891 False 1998.2 4202 93.398200 256 6834 5 chr6A.!!$F1 6578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
592 600 0.035056 GTTACCATCAGGCAGGCAGT 60.035 55.0 0.00 0.0 39.06 4.40 F
598 606 0.036010 ATCAGGCAGGCAGTACACAC 60.036 55.0 0.00 0.0 0.00 3.82 F
1962 2195 0.116940 ATGGGCACAAAGGGTCCATT 59.883 50.0 0.00 0.0 34.89 3.16 F
2922 3159 0.324614 TGGTGCTGGGTCATGTACTG 59.675 55.0 0.00 0.0 0.00 2.74 F
3467 3712 0.179032 ATTTCTGACCACCGCACACA 60.179 50.0 0.00 0.0 0.00 3.72 F
3964 4230 1.226746 GTGTTTAGCGCCAACTCAGT 58.773 50.0 18.13 0.0 0.00 3.41 F
5771 6254 1.741327 CTGTTGCTTGGCCTTGTGCT 61.741 55.0 3.32 0.0 40.92 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2187 2420 0.671781 GACTGTGCAGATCCGTTGCT 60.672 55.000 6.17 0.00 42.02 3.91 R
2592 2829 0.254178 ACACCAGATCAGGATGCCAC 59.746 55.000 11.72 0.00 34.76 5.01 R
3467 3712 0.732880 GTGTGTGAGTGCGCGTATCT 60.733 55.000 8.43 3.21 0.00 1.98 R
4557 5020 0.807667 GGACAGTGCTATCAGTGCGG 60.808 60.000 1.26 0.00 45.34 5.69 R
5425 5893 2.203070 CTAGGTGGATGCGGTGCC 60.203 66.667 0.00 0.00 0.00 5.01 R
5817 6300 0.840617 TTACCAGCCACACAGTCCAA 59.159 50.000 0.00 0.00 0.00 3.53 R
6910 7400 0.034767 ATCAGTCTCCGGACCACGTA 60.035 55.000 0.00 0.00 43.05 3.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.109675 GGGGGCGGCTGTGTGTAT 62.110 66.667 9.56 0.00 0.00 2.29
31 32 2.824041 GGGGCGGCTGTGTGTATG 60.824 66.667 9.56 0.00 0.00 2.39
32 33 2.046314 GGGCGGCTGTGTGTATGT 60.046 61.111 9.56 0.00 0.00 2.29
33 34 2.398554 GGGCGGCTGTGTGTATGTG 61.399 63.158 9.56 0.00 0.00 3.21
34 35 2.398554 GGCGGCTGTGTGTATGTGG 61.399 63.158 0.00 0.00 0.00 4.17
35 36 3.039202 GCGGCTGTGTGTATGTGGC 62.039 63.158 0.00 0.00 0.00 5.01
36 37 2.739704 CGGCTGTGTGTATGTGGCG 61.740 63.158 0.00 0.00 39.98 5.69
37 38 1.375396 GGCTGTGTGTATGTGGCGA 60.375 57.895 0.00 0.00 0.00 5.54
38 39 0.744414 GGCTGTGTGTATGTGGCGAT 60.744 55.000 0.00 0.00 0.00 4.58
39 40 1.086696 GCTGTGTGTATGTGGCGATT 58.913 50.000 0.00 0.00 0.00 3.34
40 41 1.202065 GCTGTGTGTATGTGGCGATTG 60.202 52.381 0.00 0.00 0.00 2.67
41 42 2.076100 CTGTGTGTATGTGGCGATTGT 58.924 47.619 0.00 0.00 0.00 2.71
42 43 1.803555 TGTGTGTATGTGGCGATTGTG 59.196 47.619 0.00 0.00 0.00 3.33
43 44 2.073056 GTGTGTATGTGGCGATTGTGA 58.927 47.619 0.00 0.00 0.00 3.58
44 45 2.094258 GTGTGTATGTGGCGATTGTGAG 59.906 50.000 0.00 0.00 0.00 3.51
45 46 2.289382 TGTGTATGTGGCGATTGTGAGT 60.289 45.455 0.00 0.00 0.00 3.41
46 47 2.094258 GTGTATGTGGCGATTGTGAGTG 59.906 50.000 0.00 0.00 0.00 3.51
47 48 1.665679 GTATGTGGCGATTGTGAGTGG 59.334 52.381 0.00 0.00 0.00 4.00
48 49 0.677731 ATGTGGCGATTGTGAGTGGG 60.678 55.000 0.00 0.00 0.00 4.61
49 50 1.003839 GTGGCGATTGTGAGTGGGA 60.004 57.895 0.00 0.00 0.00 4.37
50 51 1.021390 GTGGCGATTGTGAGTGGGAG 61.021 60.000 0.00 0.00 0.00 4.30
51 52 1.450312 GGCGATTGTGAGTGGGAGG 60.450 63.158 0.00 0.00 0.00 4.30
52 53 1.596934 GCGATTGTGAGTGGGAGGA 59.403 57.895 0.00 0.00 0.00 3.71
53 54 0.460987 GCGATTGTGAGTGGGAGGAG 60.461 60.000 0.00 0.00 0.00 3.69
54 55 0.176680 CGATTGTGAGTGGGAGGAGG 59.823 60.000 0.00 0.00 0.00 4.30
55 56 0.107459 GATTGTGAGTGGGAGGAGGC 60.107 60.000 0.00 0.00 0.00 4.70
56 57 1.566298 ATTGTGAGTGGGAGGAGGCC 61.566 60.000 0.00 0.00 0.00 5.19
57 58 2.607750 GTGAGTGGGAGGAGGCCA 60.608 66.667 5.01 0.00 0.00 5.36
58 59 2.607750 TGAGTGGGAGGAGGCCAC 60.608 66.667 5.01 0.00 35.00 5.01
59 60 2.607750 GAGTGGGAGGAGGCCACA 60.608 66.667 5.01 0.00 36.97 4.17
60 61 2.930562 AGTGGGAGGAGGCCACAC 60.931 66.667 5.01 4.03 36.97 3.82
61 62 3.249189 GTGGGAGGAGGCCACACA 61.249 66.667 5.01 0.00 34.92 3.72
62 63 2.449518 TGGGAGGAGGCCACACAA 60.450 61.111 5.01 0.00 0.00 3.33
63 64 2.352805 GGGAGGAGGCCACACAAG 59.647 66.667 5.01 0.00 0.00 3.16
64 65 2.224159 GGGAGGAGGCCACACAAGA 61.224 63.158 5.01 0.00 0.00 3.02
65 66 1.298014 GGAGGAGGCCACACAAGAG 59.702 63.158 5.01 0.00 0.00 2.85
66 67 1.376553 GAGGAGGCCACACAAGAGC 60.377 63.158 5.01 0.00 0.00 4.09
70 71 2.045926 GGCCACACAAGAGCCGAT 60.046 61.111 0.00 0.00 36.84 4.18
71 72 2.109126 GGCCACACAAGAGCCGATC 61.109 63.158 0.00 0.00 36.84 3.69
72 73 1.375908 GCCACACAAGAGCCGATCA 60.376 57.895 0.00 0.00 0.00 2.92
73 74 1.639298 GCCACACAAGAGCCGATCAC 61.639 60.000 0.00 0.00 0.00 3.06
74 75 0.320683 CCACACAAGAGCCGATCACA 60.321 55.000 0.00 0.00 0.00 3.58
75 76 0.792640 CACACAAGAGCCGATCACAC 59.207 55.000 0.00 0.00 0.00 3.82
76 77 0.320771 ACACAAGAGCCGATCACACC 60.321 55.000 0.00 0.00 0.00 4.16
77 78 0.320683 CACAAGAGCCGATCACACCA 60.321 55.000 0.00 0.00 0.00 4.17
78 79 0.396435 ACAAGAGCCGATCACACCAA 59.604 50.000 0.00 0.00 0.00 3.67
79 80 1.202758 ACAAGAGCCGATCACACCAAA 60.203 47.619 0.00 0.00 0.00 3.28
80 81 2.086869 CAAGAGCCGATCACACCAAAT 58.913 47.619 0.00 0.00 0.00 2.32
81 82 2.029838 AGAGCCGATCACACCAAATC 57.970 50.000 0.00 0.00 0.00 2.17
82 83 1.017387 GAGCCGATCACACCAAATCC 58.983 55.000 0.00 0.00 0.00 3.01
83 84 0.744414 AGCCGATCACACCAAATCCG 60.744 55.000 0.00 0.00 0.00 4.18
84 85 0.742990 GCCGATCACACCAAATCCGA 60.743 55.000 0.00 0.00 0.00 4.55
85 86 1.006832 CCGATCACACCAAATCCGAC 58.993 55.000 0.00 0.00 0.00 4.79
86 87 1.674519 CCGATCACACCAAATCCGACA 60.675 52.381 0.00 0.00 0.00 4.35
87 88 1.660607 CGATCACACCAAATCCGACAG 59.339 52.381 0.00 0.00 0.00 3.51
88 89 2.009774 GATCACACCAAATCCGACAGG 58.990 52.381 0.00 0.00 39.46 4.00
97 98 4.968553 TCCGACAGGAAAGAGGGT 57.031 55.556 0.00 0.00 45.12 4.34
98 99 3.159141 TCCGACAGGAAAGAGGGTT 57.841 52.632 0.00 0.00 45.12 4.11
99 100 1.430992 TCCGACAGGAAAGAGGGTTT 58.569 50.000 0.00 0.00 45.12 3.27
100 101 2.612000 TCCGACAGGAAAGAGGGTTTA 58.388 47.619 0.00 0.00 45.12 2.01
101 102 2.974099 TCCGACAGGAAAGAGGGTTTAA 59.026 45.455 0.00 0.00 45.12 1.52
102 103 3.391955 TCCGACAGGAAAGAGGGTTTAAA 59.608 43.478 0.00 0.00 45.12 1.52
103 104 3.751698 CCGACAGGAAAGAGGGTTTAAAG 59.248 47.826 0.00 0.00 41.02 1.85
104 105 3.751698 CGACAGGAAAGAGGGTTTAAAGG 59.248 47.826 0.00 0.00 0.00 3.11
105 106 4.504340 CGACAGGAAAGAGGGTTTAAAGGA 60.504 45.833 0.00 0.00 0.00 3.36
106 107 4.986783 ACAGGAAAGAGGGTTTAAAGGAG 58.013 43.478 0.00 0.00 0.00 3.69
107 108 3.759086 CAGGAAAGAGGGTTTAAAGGAGC 59.241 47.826 0.00 0.00 0.00 4.70
108 109 3.090037 GGAAAGAGGGTTTAAAGGAGCC 58.910 50.000 0.00 0.00 34.91 4.70
109 110 3.499745 GGAAAGAGGGTTTAAAGGAGCCA 60.500 47.826 0.00 0.00 37.13 4.75
110 111 3.895704 AAGAGGGTTTAAAGGAGCCAA 57.104 42.857 0.00 0.00 37.13 4.52
111 112 3.895704 AGAGGGTTTAAAGGAGCCAAA 57.104 42.857 0.00 0.00 37.13 3.28
112 113 4.404185 AGAGGGTTTAAAGGAGCCAAAT 57.596 40.909 0.00 0.00 37.13 2.32
113 114 4.089361 AGAGGGTTTAAAGGAGCCAAATG 58.911 43.478 0.00 0.00 37.13 2.32
114 115 4.086457 GAGGGTTTAAAGGAGCCAAATGA 58.914 43.478 0.00 0.00 37.13 2.57
115 116 4.687976 AGGGTTTAAAGGAGCCAAATGAT 58.312 39.130 0.00 0.00 37.13 2.45
116 117 5.093677 AGGGTTTAAAGGAGCCAAATGATT 58.906 37.500 0.00 0.00 37.13 2.57
117 118 5.046376 AGGGTTTAAAGGAGCCAAATGATTG 60.046 40.000 0.00 0.00 37.13 2.67
118 119 5.046663 GGGTTTAAAGGAGCCAAATGATTGA 60.047 40.000 0.00 0.00 38.94 2.57
119 120 5.869344 GGTTTAAAGGAGCCAAATGATTGAC 59.131 40.000 0.00 0.00 38.94 3.18
120 121 6.454795 GTTTAAAGGAGCCAAATGATTGACA 58.545 36.000 0.00 0.00 38.94 3.58
121 122 6.662865 TTAAAGGAGCCAAATGATTGACAA 57.337 33.333 0.00 0.00 38.94 3.18
122 123 5.549742 AAAGGAGCCAAATGATTGACAAA 57.450 34.783 0.00 0.00 38.94 2.83
123 124 4.796038 AGGAGCCAAATGATTGACAAAG 57.204 40.909 0.00 0.00 38.94 2.77
124 125 4.154942 AGGAGCCAAATGATTGACAAAGT 58.845 39.130 0.00 0.00 38.94 2.66
125 126 4.021719 AGGAGCCAAATGATTGACAAAGTG 60.022 41.667 0.00 0.00 38.94 3.16
126 127 3.656559 AGCCAAATGATTGACAAAGTGC 58.343 40.909 0.00 0.00 38.94 4.40
127 128 3.069872 AGCCAAATGATTGACAAAGTGCA 59.930 39.130 0.00 0.00 38.94 4.57
128 129 3.998341 GCCAAATGATTGACAAAGTGCAT 59.002 39.130 0.00 0.00 38.94 3.96
129 130 4.453136 GCCAAATGATTGACAAAGTGCATT 59.547 37.500 0.00 0.00 38.94 3.56
130 131 5.049267 GCCAAATGATTGACAAAGTGCATTT 60.049 36.000 12.18 12.18 38.94 2.32
131 132 6.147492 GCCAAATGATTGACAAAGTGCATTTA 59.853 34.615 15.23 0.00 38.94 1.40
132 133 7.148373 GCCAAATGATTGACAAAGTGCATTTAT 60.148 33.333 15.23 0.00 38.94 1.40
133 134 8.723311 CCAAATGATTGACAAAGTGCATTTATT 58.277 29.630 15.23 0.00 38.94 1.40
147 148 9.646522 AAGTGCATTTATTATCAATCTAACCCT 57.353 29.630 0.00 0.00 0.00 4.34
148 149 9.071276 AGTGCATTTATTATCAATCTAACCCTG 57.929 33.333 0.00 0.00 0.00 4.45
149 150 8.850156 GTGCATTTATTATCAATCTAACCCTGT 58.150 33.333 0.00 0.00 0.00 4.00
150 151 9.066892 TGCATTTATTATCAATCTAACCCTGTC 57.933 33.333 0.00 0.00 0.00 3.51
151 152 9.066892 GCATTTATTATCAATCTAACCCTGTCA 57.933 33.333 0.00 0.00 0.00 3.58
154 155 9.793259 TTTATTATCAATCTAACCCTGTCATCC 57.207 33.333 0.00 0.00 0.00 3.51
155 156 6.823286 TTATCAATCTAACCCTGTCATCCA 57.177 37.500 0.00 0.00 0.00 3.41
156 157 5.715439 ATCAATCTAACCCTGTCATCCAA 57.285 39.130 0.00 0.00 0.00 3.53
157 158 5.512942 TCAATCTAACCCTGTCATCCAAA 57.487 39.130 0.00 0.00 0.00 3.28
158 159 5.253330 TCAATCTAACCCTGTCATCCAAAC 58.747 41.667 0.00 0.00 0.00 2.93
159 160 4.927267 ATCTAACCCTGTCATCCAAACA 57.073 40.909 0.00 0.00 0.00 2.83
160 161 4.015872 TCTAACCCTGTCATCCAAACAC 57.984 45.455 0.00 0.00 0.00 3.32
161 162 1.995376 AACCCTGTCATCCAAACACC 58.005 50.000 0.00 0.00 0.00 4.16
162 163 1.149101 ACCCTGTCATCCAAACACCT 58.851 50.000 0.00 0.00 0.00 4.00
163 164 1.073923 ACCCTGTCATCCAAACACCTC 59.926 52.381 0.00 0.00 0.00 3.85
164 165 1.352352 CCCTGTCATCCAAACACCTCT 59.648 52.381 0.00 0.00 0.00 3.69
165 166 2.224867 CCCTGTCATCCAAACACCTCTT 60.225 50.000 0.00 0.00 0.00 2.85
166 167 3.490348 CCTGTCATCCAAACACCTCTTT 58.510 45.455 0.00 0.00 0.00 2.52
167 168 3.254166 CCTGTCATCCAAACACCTCTTTG 59.746 47.826 0.00 0.00 0.00 2.77
169 170 2.029918 GTCATCCAAACACCTCTTTGGC 60.030 50.000 5.91 0.00 46.88 4.52
170 171 2.158475 TCATCCAAACACCTCTTTGGCT 60.158 45.455 5.91 0.00 46.88 4.75
171 172 3.073798 TCATCCAAACACCTCTTTGGCTA 59.926 43.478 5.91 0.00 46.88 3.93
172 173 3.140325 TCCAAACACCTCTTTGGCTAG 57.860 47.619 5.91 0.00 46.88 3.42
173 174 2.708861 TCCAAACACCTCTTTGGCTAGA 59.291 45.455 5.91 0.00 46.88 2.43
174 175 3.137544 TCCAAACACCTCTTTGGCTAGAA 59.862 43.478 5.91 0.00 46.88 2.10
175 176 4.082125 CCAAACACCTCTTTGGCTAGAAT 58.918 43.478 0.00 0.00 42.89 2.40
176 177 5.013704 TCCAAACACCTCTTTGGCTAGAATA 59.986 40.000 5.91 0.00 46.88 1.75
177 178 5.355350 CCAAACACCTCTTTGGCTAGAATAG 59.645 44.000 0.00 0.00 42.89 1.73
221 222 9.703677 ATTAGAAACTAACTCTAACCTCTAGCT 57.296 33.333 0.00 0.00 38.02 3.32
224 225 9.531158 AGAAACTAACTCTAACCTCTAGCTAAA 57.469 33.333 0.00 0.00 0.00 1.85
237 238 9.435570 AACCTCTAGCTAAATTAGAGTATCCAA 57.564 33.333 3.88 0.00 41.56 3.53
238 239 9.435570 ACCTCTAGCTAAATTAGAGTATCCAAA 57.564 33.333 3.88 0.00 41.56 3.28
243 244 8.697507 AGCTAAATTAGAGTATCCAAAATGGG 57.302 34.615 3.88 0.00 38.32 4.00
244 245 7.231519 AGCTAAATTAGAGTATCCAAAATGGGC 59.768 37.037 3.88 0.00 38.32 5.36
245 246 6.731292 AAATTAGAGTATCCAAAATGGGCC 57.269 37.500 0.00 0.00 38.32 5.80
246 247 2.348411 AGAGTATCCAAAATGGGCCG 57.652 50.000 0.00 0.00 38.32 6.13
247 248 1.843851 AGAGTATCCAAAATGGGCCGA 59.156 47.619 0.00 0.00 38.32 5.54
248 249 2.241176 AGAGTATCCAAAATGGGCCGAA 59.759 45.455 0.00 0.00 38.32 4.30
249 250 2.618709 GAGTATCCAAAATGGGCCGAAG 59.381 50.000 0.00 0.00 38.32 3.79
250 251 2.241176 AGTATCCAAAATGGGCCGAAGA 59.759 45.455 0.00 0.00 38.32 2.87
251 252 1.767759 ATCCAAAATGGGCCGAAGAG 58.232 50.000 0.00 0.00 38.32 2.85
252 253 0.695924 TCCAAAATGGGCCGAAGAGA 59.304 50.000 0.00 0.00 38.32 3.10
253 254 1.098050 CCAAAATGGGCCGAAGAGAG 58.902 55.000 0.00 0.00 32.67 3.20
254 255 1.340017 CCAAAATGGGCCGAAGAGAGA 60.340 52.381 0.00 0.00 32.67 3.10
255 256 2.648059 CAAAATGGGCCGAAGAGAGAT 58.352 47.619 0.00 0.00 0.00 2.75
256 257 3.433598 CCAAAATGGGCCGAAGAGAGATA 60.434 47.826 0.00 0.00 32.67 1.98
257 258 4.199310 CAAAATGGGCCGAAGAGAGATAA 58.801 43.478 0.00 0.00 0.00 1.75
258 259 4.713792 AAATGGGCCGAAGAGAGATAAT 57.286 40.909 0.00 0.00 0.00 1.28
259 260 3.971245 ATGGGCCGAAGAGAGATAATC 57.029 47.619 0.00 0.00 0.00 1.75
260 261 1.971357 TGGGCCGAAGAGAGATAATCC 59.029 52.381 0.00 0.00 0.00 3.01
261 262 1.971357 GGGCCGAAGAGAGATAATCCA 59.029 52.381 0.00 0.00 0.00 3.41
262 263 2.368875 GGGCCGAAGAGAGATAATCCAA 59.631 50.000 0.00 0.00 0.00 3.53
263 264 3.394719 GGCCGAAGAGAGATAATCCAAC 58.605 50.000 0.00 0.00 0.00 3.77
264 265 3.053455 GCCGAAGAGAGATAATCCAACG 58.947 50.000 0.00 0.00 0.00 4.10
265 266 3.491104 GCCGAAGAGAGATAATCCAACGT 60.491 47.826 0.00 0.00 0.00 3.99
291 292 1.711060 GCGATCGGCCGAAATTTGGA 61.711 55.000 34.66 6.66 34.80 3.53
395 397 1.300620 CTCGTCGCCTTGTCCACAA 60.301 57.895 0.00 0.00 0.00 3.33
494 496 3.749609 ACGGAACAAAATTTACTCCCTCG 59.250 43.478 0.00 0.00 0.00 4.63
580 588 2.257409 CTGCCTCCGCCAGTTACCAT 62.257 60.000 0.00 0.00 0.00 3.55
582 590 1.904771 CCTCCGCCAGTTACCATCA 59.095 57.895 0.00 0.00 0.00 3.07
588 596 0.749454 GCCAGTTACCATCAGGCAGG 60.749 60.000 0.00 0.00 44.59 4.85
589 597 0.749454 CCAGTTACCATCAGGCAGGC 60.749 60.000 0.00 0.00 39.06 4.85
590 598 0.035152 CAGTTACCATCAGGCAGGCA 60.035 55.000 0.00 0.00 39.06 4.75
591 599 0.254178 AGTTACCATCAGGCAGGCAG 59.746 55.000 0.00 0.00 39.06 4.85
592 600 0.035056 GTTACCATCAGGCAGGCAGT 60.035 55.000 0.00 0.00 39.06 4.40
593 601 1.209504 GTTACCATCAGGCAGGCAGTA 59.790 52.381 0.00 0.00 39.06 2.74
594 602 0.830648 TACCATCAGGCAGGCAGTAC 59.169 55.000 0.00 0.00 39.06 2.73
595 603 1.200760 ACCATCAGGCAGGCAGTACA 61.201 55.000 0.00 0.00 39.06 2.90
596 604 0.745845 CCATCAGGCAGGCAGTACAC 60.746 60.000 0.00 0.00 0.00 2.90
597 605 0.036105 CATCAGGCAGGCAGTACACA 60.036 55.000 0.00 0.00 0.00 3.72
598 606 0.036010 ATCAGGCAGGCAGTACACAC 60.036 55.000 0.00 0.00 0.00 3.82
599 607 1.071299 CAGGCAGGCAGTACACACA 59.929 57.895 0.00 0.00 0.00 3.72
600 608 1.071471 AGGCAGGCAGTACACACAC 59.929 57.895 0.00 0.00 0.00 3.82
640 648 2.509336 CCGGCAGGCAGTAACGAG 60.509 66.667 0.00 0.00 0.00 4.18
641 649 2.261671 CGGCAGGCAGTAACGAGT 59.738 61.111 0.00 0.00 0.00 4.18
642 650 2.094659 CGGCAGGCAGTAACGAGTG 61.095 63.158 0.00 0.00 0.00 3.51
643 651 1.292223 GGCAGGCAGTAACGAGTGA 59.708 57.895 0.00 0.00 0.00 3.41
644 652 1.014564 GGCAGGCAGTAACGAGTGAC 61.015 60.000 0.00 0.00 33.68 3.67
646 654 0.240145 CAGGCAGTAACGAGTGACGA 59.760 55.000 0.00 0.00 45.77 4.20
712 725 2.483188 GGAGAGGACATTTTACCGCGAT 60.483 50.000 8.23 0.00 0.00 4.58
872 896 2.135139 CACTTTGCTGCTACGACTTCA 58.865 47.619 0.00 0.00 0.00 3.02
878 902 1.134965 GCTGCTACGACTTCACCATCT 60.135 52.381 0.00 0.00 0.00 2.90
946 980 2.802667 CGCAATTCCTCGAGCACCG 61.803 63.158 6.99 0.00 40.25 4.94
1038 1265 4.038804 CTGGGGGAGGAGGGGGAA 62.039 72.222 0.00 0.00 0.00 3.97
1476 1709 2.282040 AGGAACCTCGACGACGGT 60.282 61.111 7.55 11.66 40.21 4.83
1962 2195 0.116940 ATGGGCACAAAGGGTCCATT 59.883 50.000 0.00 0.00 34.89 3.16
2078 2311 2.041405 GGAGGAGAGGGAGGTGGG 60.041 72.222 0.00 0.00 0.00 4.61
2192 2425 0.520847 GAGAAGAAGCTGCCAGCAAC 59.479 55.000 20.53 12.00 45.56 4.17
2267 2500 2.554142 TGTGTTTGCACTGTCTGAGAG 58.446 47.619 0.00 0.00 45.44 3.20
2433 2669 7.442364 TGTTCTTTGAGTAGAATGAAGTTCAGG 59.558 37.037 11.91 0.00 39.39 3.86
2468 2705 7.793036 AGTCCCAGTGATTAGAAATAACTACC 58.207 38.462 0.00 0.00 0.00 3.18
2475 2712 7.628101 AGTGATTAGAAATAACTACCCCCTCTT 59.372 37.037 0.00 0.00 0.00 2.85
2481 2718 5.970501 AATAACTACCCCCTCTTTAGTGG 57.029 43.478 0.00 0.00 0.00 4.00
2529 2766 5.163437 ACGGAGGGAGTACATTTCTGTATTC 60.163 44.000 0.00 1.03 41.46 1.75
2630 2867 6.112734 TGGTGTACAATGCTGGTATTAGAAG 58.887 40.000 0.00 0.00 0.00 2.85
2678 2915 2.919229 GCAATCCGATGTTGAAGCAAAG 59.081 45.455 0.00 0.00 0.00 2.77
2686 2923 5.584649 CCGATGTTGAAGCAAAGGACTTATA 59.415 40.000 0.00 0.00 0.00 0.98
2846 3083 6.634805 TGGATGTGAGATTTGAACTCTCTAC 58.365 40.000 12.78 9.84 39.90 2.59
2922 3159 0.324614 TGGTGCTGGGTCATGTACTG 59.675 55.000 0.00 0.00 0.00 2.74
2930 3167 2.201732 GGGTCATGTACTGCACATACG 58.798 52.381 0.00 0.00 46.47 3.06
3141 3386 2.364002 ACCAACACATGTAAACCCTTGC 59.636 45.455 0.00 0.00 0.00 4.01
3260 3505 4.375406 GCTAGGGCCAGGACACTA 57.625 61.111 6.18 0.00 0.00 2.74
3354 3599 4.284234 TCAGTGACACAAGATCAGATTCCA 59.716 41.667 8.59 0.00 0.00 3.53
3461 3706 3.127548 CCATTCTGAATTTCTGACCACCG 59.872 47.826 0.00 0.00 0.00 4.94
3467 3712 0.179032 ATTTCTGACCACCGCACACA 60.179 50.000 0.00 0.00 0.00 3.72
3495 3740 2.539547 CGCACTCACACACAAAAGAAGG 60.540 50.000 0.00 0.00 0.00 3.46
3496 3741 2.796032 GCACTCACACACAAAAGAAGGC 60.796 50.000 0.00 0.00 0.00 4.35
3521 3766 7.754924 GCAAAAGGATAAATGACGATTTTCTCA 59.245 33.333 0.00 0.00 33.63 3.27
3569 3814 1.496060 TTACTCCATCATCCGCCACT 58.504 50.000 0.00 0.00 0.00 4.00
3598 3843 8.934023 TCAGGTTTCTTGGTCATTTATACTTT 57.066 30.769 0.00 0.00 0.00 2.66
3685 3931 7.713507 ACTTCAACTTGCAGTGTGTTATAGTTA 59.286 33.333 0.00 0.00 0.00 2.24
3686 3932 7.652300 TCAACTTGCAGTGTGTTATAGTTAG 57.348 36.000 0.00 0.00 0.00 2.34
3687 3933 6.649141 TCAACTTGCAGTGTGTTATAGTTAGG 59.351 38.462 0.00 0.00 0.00 2.69
3688 3934 6.354794 ACTTGCAGTGTGTTATAGTTAGGA 57.645 37.500 0.00 0.00 0.00 2.94
3689 3935 6.164176 ACTTGCAGTGTGTTATAGTTAGGAC 58.836 40.000 0.00 0.00 0.00 3.85
3690 3936 5.731957 TGCAGTGTGTTATAGTTAGGACA 57.268 39.130 0.00 0.00 0.00 4.02
3691 3937 6.294361 TGCAGTGTGTTATAGTTAGGACAT 57.706 37.500 0.00 0.00 0.00 3.06
3692 3938 6.707290 TGCAGTGTGTTATAGTTAGGACATT 58.293 36.000 0.00 0.00 0.00 2.71
3693 3939 6.593770 TGCAGTGTGTTATAGTTAGGACATTG 59.406 38.462 0.00 0.00 0.00 2.82
3694 3940 6.037172 GCAGTGTGTTATAGTTAGGACATTGG 59.963 42.308 0.00 0.00 0.00 3.16
3695 3941 6.037172 CAGTGTGTTATAGTTAGGACATTGGC 59.963 42.308 0.00 0.00 0.00 4.52
3696 3942 5.296035 GTGTGTTATAGTTAGGACATTGGCC 59.704 44.000 0.00 0.00 0.00 5.36
3697 3943 5.045505 TGTGTTATAGTTAGGACATTGGCCA 60.046 40.000 12.11 0.00 0.00 5.36
3698 3944 6.062095 GTGTTATAGTTAGGACATTGGCCAT 58.938 40.000 12.11 0.00 0.00 4.40
3699 3945 6.204882 GTGTTATAGTTAGGACATTGGCCATC 59.795 42.308 12.11 0.00 0.00 3.51
3700 3946 6.101150 TGTTATAGTTAGGACATTGGCCATCT 59.899 38.462 12.11 8.21 0.00 2.90
3701 3947 5.653255 ATAGTTAGGACATTGGCCATCTT 57.347 39.130 12.11 0.00 0.00 2.40
3702 3948 3.624777 AGTTAGGACATTGGCCATCTTG 58.375 45.455 12.11 7.86 0.00 3.02
3703 3949 3.010584 AGTTAGGACATTGGCCATCTTGT 59.989 43.478 12.11 11.51 0.00 3.16
3704 3950 2.134789 AGGACATTGGCCATCTTGTC 57.865 50.000 25.02 25.02 38.17 3.18
3705 3951 1.355381 AGGACATTGGCCATCTTGTCA 59.645 47.619 29.89 9.41 40.14 3.58
3706 3952 2.170166 GGACATTGGCCATCTTGTCAA 58.830 47.619 29.89 8.75 40.14 3.18
3707 3953 2.562298 GGACATTGGCCATCTTGTCAAA 59.438 45.455 29.89 8.10 40.14 2.69
3708 3954 3.006752 GGACATTGGCCATCTTGTCAAAA 59.993 43.478 29.89 7.45 40.14 2.44
3709 3955 4.502950 GGACATTGGCCATCTTGTCAAAAA 60.503 41.667 29.89 6.99 40.14 1.94
3731 3977 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
3732 3978 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
3733 3979 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
3734 3980 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
3750 3996 4.079558 ACGGAGGGAGTACTAATTAGGACA 60.080 45.833 26.24 5.28 39.68 4.02
3806 4053 3.030652 CACCCGTTTGCACACCTC 58.969 61.111 0.00 0.00 0.00 3.85
3807 4054 2.203294 ACCCGTTTGCACACCTCC 60.203 61.111 0.00 0.00 0.00 4.30
3820 4086 2.233431 CACACCTCCCAGAGAAGAGAAG 59.767 54.545 0.00 0.00 31.43 2.85
3831 4097 8.043710 TCCCAGAGAAGAGAAGATTGATAAAAC 58.956 37.037 0.00 0.00 0.00 2.43
3862 4128 5.797051 TCTTGGCAATACCGTTAAAGTACT 58.203 37.500 0.00 0.00 43.94 2.73
3886 4152 6.953101 TGCTGGTTAATTACTCCATCACTTA 58.047 36.000 8.46 0.00 0.00 2.24
3943 4209 7.093377 TGCTTCCTTGGCATATCTAAATTTGTT 60.093 33.333 0.00 0.00 34.56 2.83
3944 4210 7.765819 GCTTCCTTGGCATATCTAAATTTGTTT 59.234 33.333 0.00 0.00 0.00 2.83
3945 4211 9.090692 CTTCCTTGGCATATCTAAATTTGTTTG 57.909 33.333 0.00 0.00 0.00 2.93
3946 4212 8.133024 TCCTTGGCATATCTAAATTTGTTTGT 57.867 30.769 0.00 0.00 0.00 2.83
3964 4230 1.226746 GTGTTTAGCGCCAACTCAGT 58.773 50.000 18.13 0.00 0.00 3.41
4080 4346 3.433274 CGCTAGCTGAATGTTGACTTCAA 59.567 43.478 13.93 0.00 32.53 2.69
4084 4350 6.525976 GCTAGCTGAATGTTGACTTCAATTTC 59.474 38.462 7.70 3.46 38.24 2.17
4193 4459 6.268847 AGGTATCTATGCAAGAAACTCTAGGG 59.731 42.308 0.00 0.00 37.89 3.53
4212 4478 3.702045 AGGGATCTCTTCCGAGTACTTTG 59.298 47.826 0.00 0.00 46.52 2.77
4290 4753 7.825270 TGCATTCCAAGCTAATTTTGAAATCAT 59.175 29.630 0.00 0.00 0.00 2.45
4480 4943 5.277779 GCACATGTCAAGCACTTACTGTTTA 60.278 40.000 0.00 0.00 0.00 2.01
4557 5020 2.010145 TCTCTCCATGTGCGCTTAAC 57.990 50.000 9.73 0.00 0.00 2.01
4774 5237 2.504367 CCGATGGACAGGTTTGACTTT 58.496 47.619 0.00 0.00 0.00 2.66
4801 5264 8.918202 TTCATAGTTCTAAATTGGTCAACAGT 57.082 30.769 0.00 0.00 0.00 3.55
4926 5394 6.826741 GTCTGGTATATATCTGTCCCTCTCTC 59.173 46.154 0.00 0.00 0.00 3.20
4927 5395 6.505700 TCTGGTATATATCTGTCCCTCTCTCA 59.494 42.308 0.00 0.00 0.00 3.27
4928 5396 7.018650 TCTGGTATATATCTGTCCCTCTCTCAA 59.981 40.741 0.00 0.00 0.00 3.02
4929 5397 7.713518 TGGTATATATCTGTCCCTCTCTCAAT 58.286 38.462 0.00 0.00 0.00 2.57
4930 5398 8.180165 TGGTATATATCTGTCCCTCTCTCAATT 58.820 37.037 0.00 0.00 0.00 2.32
4931 5399 8.474025 GGTATATATCTGTCCCTCTCTCAATTG 58.526 40.741 0.00 0.00 0.00 2.32
5213 5681 6.823286 TGAGATATTTGTCCTGTCCCATTA 57.177 37.500 0.00 0.00 0.00 1.90
5214 5682 7.392766 TGAGATATTTGTCCTGTCCCATTAT 57.607 36.000 0.00 0.00 0.00 1.28
5371 5839 5.636903 ATACTGAGCTTGGTAATGTCCAT 57.363 39.130 0.00 0.00 37.33 3.41
5440 5908 3.286694 AATGGCACCGCATCCACCT 62.287 57.895 0.00 0.00 34.81 4.00
5442 5910 2.203070 GGCACCGCATCCACCTAG 60.203 66.667 0.00 0.00 0.00 3.02
5497 5980 4.951715 TCCCTTTACAACACTCGCTATCTA 59.048 41.667 0.00 0.00 0.00 1.98
5771 6254 1.741327 CTGTTGCTTGGCCTTGTGCT 61.741 55.000 3.32 0.00 40.92 4.40
5796 6279 3.986572 CGCCAGAATGACTAATAGAGCTG 59.013 47.826 0.00 0.00 39.69 4.24
5817 6300 3.840666 TGTCTCCAGGAAGCAAGATAACT 59.159 43.478 0.00 0.00 0.00 2.24
5905 6388 1.230324 GTTCAGGACCAGAGCAACAC 58.770 55.000 0.00 0.00 0.00 3.32
5939 6422 2.358247 GCGACTTGGCCCGAAGAA 60.358 61.111 9.71 0.00 0.00 2.52
5985 6468 4.867086 CCCCAAGTCTAATACAACCCATT 58.133 43.478 0.00 0.00 0.00 3.16
6126 6609 3.198068 TGAGTACCCGTATCGTAGACAC 58.802 50.000 0.00 0.00 42.51 3.67
6364 6848 2.826428 CTGGTTGGAGTGATATCGTGG 58.174 52.381 0.00 0.00 0.00 4.94
6382 6866 3.005539 TCCTCTCACCCAGCAGCC 61.006 66.667 0.00 0.00 0.00 4.85
6405 6889 2.159653 CGACCTTGTAGCAATTGTCTGC 60.160 50.000 7.40 8.84 42.97 4.26
6478 6963 7.807977 AGAAAAATCTCAGTGCTACAGAAAA 57.192 32.000 0.00 0.00 0.00 2.29
6606 7093 4.098894 AGACCATTCCATGAAAGGCATTT 58.901 39.130 0.00 0.00 34.22 2.32
6607 7094 4.533311 AGACCATTCCATGAAAGGCATTTT 59.467 37.500 0.00 0.00 34.22 1.82
6685 7172 2.146342 ACCATGTCTTGAGTTCGCAAG 58.854 47.619 9.39 9.39 45.10 4.01
6710 7197 2.682136 TACCTGCACTGCCCGCTA 60.682 61.111 0.00 0.00 0.00 4.26
6711 7198 2.063979 TACCTGCACTGCCCGCTAT 61.064 57.895 0.00 0.00 0.00 2.97
6712 7199 0.757561 TACCTGCACTGCCCGCTATA 60.758 55.000 0.00 0.00 0.00 1.31
6713 7200 1.146041 CCTGCACTGCCCGCTATAA 59.854 57.895 0.00 0.00 0.00 0.98
6714 7201 0.882042 CCTGCACTGCCCGCTATAAG 60.882 60.000 0.00 0.00 0.00 1.73
6715 7202 1.502163 CTGCACTGCCCGCTATAAGC 61.502 60.000 0.00 0.00 38.02 3.09
6716 7203 2.254464 GCACTGCCCGCTATAAGCC 61.254 63.158 0.00 0.00 38.18 4.35
6717 7204 1.146041 CACTGCCCGCTATAAGCCA 59.854 57.895 0.00 0.00 38.18 4.75
6718 7205 0.463654 CACTGCCCGCTATAAGCCAA 60.464 55.000 0.00 0.00 38.18 4.52
6719 7206 0.254747 ACTGCCCGCTATAAGCCAAA 59.745 50.000 0.00 0.00 38.18 3.28
6720 7207 1.340600 ACTGCCCGCTATAAGCCAAAA 60.341 47.619 0.00 0.00 38.18 2.44
6745 7232 7.615582 CTCAAAATGAGCCTACTTATCAACA 57.384 36.000 0.00 0.00 37.72 3.33
6771 7261 4.673580 GCATCATCTGTGGTCAACATTCAC 60.674 45.833 0.00 0.00 38.39 3.18
6787 7277 2.732412 TCACTTTCAGGAGAAGCGAG 57.268 50.000 0.00 0.00 34.71 5.03
6808 7298 3.715854 GTCATCAGACGTAACCGCT 57.284 52.632 0.00 0.00 37.70 5.52
6813 7303 3.367743 AGACGTAACCGCTGGCGA 61.368 61.111 16.79 0.00 42.83 5.54
6876 7366 0.032017 AGTCGGTTAGGGCATCTCCT 60.032 55.000 0.00 0.00 40.79 3.69
6878 7368 2.037144 GTCGGTTAGGGCATCTCCTAA 58.963 52.381 0.00 0.00 44.52 2.69
6883 7373 2.868964 TAGGGCATCTCCTAACCTGT 57.131 50.000 0.00 0.00 36.53 4.00
6884 7374 2.868964 AGGGCATCTCCTAACCTGTA 57.131 50.000 0.00 0.00 34.92 2.74
6885 7375 3.352611 AGGGCATCTCCTAACCTGTAT 57.647 47.619 0.00 0.00 34.92 2.29
6886 7376 4.487282 AGGGCATCTCCTAACCTGTATA 57.513 45.455 0.00 0.00 34.92 1.47
6887 7377 5.029973 AGGGCATCTCCTAACCTGTATAT 57.970 43.478 0.00 0.00 34.92 0.86
6888 7378 5.026790 AGGGCATCTCCTAACCTGTATATC 58.973 45.833 0.00 0.00 34.92 1.63
6889 7379 5.026790 GGGCATCTCCTAACCTGTATATCT 58.973 45.833 0.00 0.00 34.39 1.98
6890 7380 5.128008 GGGCATCTCCTAACCTGTATATCTC 59.872 48.000 0.00 0.00 34.39 2.75
6891 7381 5.955355 GGCATCTCCTAACCTGTATATCTCT 59.045 44.000 0.00 0.00 0.00 3.10
6892 7382 6.096282 GGCATCTCCTAACCTGTATATCTCTC 59.904 46.154 0.00 0.00 0.00 3.20
6893 7383 6.096282 GCATCTCCTAACCTGTATATCTCTCC 59.904 46.154 0.00 0.00 0.00 3.71
6894 7384 5.806818 TCTCCTAACCTGTATATCTCTCCG 58.193 45.833 0.00 0.00 0.00 4.63
6895 7385 4.919793 TCCTAACCTGTATATCTCTCCGG 58.080 47.826 0.00 0.00 0.00 5.14
6896 7386 3.444388 CCTAACCTGTATATCTCTCCGGC 59.556 52.174 0.00 0.00 0.00 6.13
6898 7388 2.958818 ACCTGTATATCTCTCCGGCAA 58.041 47.619 0.00 0.00 0.00 4.52
6899 7389 3.305720 ACCTGTATATCTCTCCGGCAAA 58.694 45.455 0.00 0.00 0.00 3.68
6900 7390 3.904339 ACCTGTATATCTCTCCGGCAAAT 59.096 43.478 0.00 0.00 0.00 2.32
6901 7391 4.248859 CCTGTATATCTCTCCGGCAAATG 58.751 47.826 0.00 0.00 0.00 2.32
6902 7392 4.262635 CCTGTATATCTCTCCGGCAAATGT 60.263 45.833 0.00 0.00 0.00 2.71
6903 7393 4.883083 TGTATATCTCTCCGGCAAATGTC 58.117 43.478 0.00 0.00 0.00 3.06
6905 7395 0.911769 ATCTCTCCGGCAAATGTCCA 59.088 50.000 0.00 0.00 0.00 4.02
6907 7397 1.281867 TCTCTCCGGCAAATGTCCATT 59.718 47.619 0.00 0.00 0.00 3.16
6908 7398 2.094675 CTCTCCGGCAAATGTCCATTT 58.905 47.619 0.00 0.00 41.33 2.32
6909 7399 2.493278 CTCTCCGGCAAATGTCCATTTT 59.507 45.455 0.00 0.00 38.84 1.82
6910 7400 2.896685 TCTCCGGCAAATGTCCATTTTT 59.103 40.909 0.00 0.00 38.84 1.94
6912 7402 4.082463 TCTCCGGCAAATGTCCATTTTTAC 60.082 41.667 0.00 0.00 38.84 2.01
6913 7403 2.920490 CCGGCAAATGTCCATTTTTACG 59.080 45.455 2.56 7.67 38.84 3.18
6914 7404 3.570559 CGGCAAATGTCCATTTTTACGT 58.429 40.909 2.56 0.00 38.84 3.57
6925 7438 2.153366 TTTTTACGTGGTCCGGAGAC 57.847 50.000 3.06 3.51 42.24 3.36
6942 7455 2.582226 CTGATACGGAAGCGCGCA 60.582 61.111 35.10 12.17 0.00 6.09
6944 7457 1.490693 CTGATACGGAAGCGCGCAAT 61.491 55.000 35.10 22.26 0.00 3.56
6947 7460 2.916502 ATACGGAAGCGCGCAATCCA 62.917 55.000 37.98 27.34 32.58 3.41
6948 7461 3.798650 CGGAAGCGCGCAATCCAA 61.799 61.111 37.98 0.00 32.58 3.53
6949 7462 2.202479 GGAAGCGCGCAATCCAAC 60.202 61.111 36.29 18.78 33.30 3.77
6950 7463 2.560861 GAAGCGCGCAATCCAACA 59.439 55.556 35.10 0.00 0.00 3.33
6951 7464 1.797537 GAAGCGCGCAATCCAACAC 60.798 57.895 35.10 9.07 0.00 3.32
6952 7465 2.187599 GAAGCGCGCAATCCAACACT 62.188 55.000 35.10 4.83 0.00 3.55
6953 7466 0.953471 AAGCGCGCAATCCAACACTA 60.953 50.000 35.10 0.00 0.00 2.74
6954 7467 1.060937 GCGCGCAATCCAACACTAG 59.939 57.895 29.10 0.00 0.00 2.57
6955 7468 1.060937 CGCGCAATCCAACACTAGC 59.939 57.895 8.75 0.00 0.00 3.42
6956 7469 1.429423 GCGCAATCCAACACTAGCC 59.571 57.895 0.30 0.00 0.00 3.93
6957 7470 1.715585 CGCAATCCAACACTAGCCG 59.284 57.895 0.00 0.00 0.00 5.52
6958 7471 1.019278 CGCAATCCAACACTAGCCGT 61.019 55.000 0.00 0.00 0.00 5.68
6959 7472 1.737696 CGCAATCCAACACTAGCCGTA 60.738 52.381 0.00 0.00 0.00 4.02
7004 7517 7.814107 TCTCAGACATTTTATCAAACATTTGGC 59.186 33.333 4.58 0.00 38.66 4.52
7005 7518 7.669427 TCAGACATTTTATCAAACATTTGGCT 58.331 30.769 4.58 0.00 38.66 4.75
7008 7521 7.388500 AGACATTTTATCAAACATTTGGCTTGG 59.612 33.333 4.58 0.00 38.66 3.61
7067 7594 3.127533 GAGCACCACCACCATCGC 61.128 66.667 0.00 0.00 0.00 4.58
7098 7625 2.581354 CCGAGTAGCAGCAGCCTT 59.419 61.111 0.00 0.00 43.56 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 4.109675 ATACACACAGCCGCCCCC 62.110 66.667 0.00 0.00 0.00 5.40
14 15 2.824041 CATACACACAGCCGCCCC 60.824 66.667 0.00 0.00 0.00 5.80
15 16 2.046314 ACATACACACAGCCGCCC 60.046 61.111 0.00 0.00 0.00 6.13
16 17 2.398554 CCACATACACACAGCCGCC 61.399 63.158 0.00 0.00 0.00 6.13
17 18 3.039202 GCCACATACACACAGCCGC 62.039 63.158 0.00 0.00 0.00 6.53
18 19 2.739704 CGCCACATACACACAGCCG 61.740 63.158 0.00 0.00 0.00 5.52
19 20 0.744414 ATCGCCACATACACACAGCC 60.744 55.000 0.00 0.00 0.00 4.85
20 21 1.086696 AATCGCCACATACACACAGC 58.913 50.000 0.00 0.00 0.00 4.40
21 22 2.076100 ACAATCGCCACATACACACAG 58.924 47.619 0.00 0.00 0.00 3.66
22 23 1.803555 CACAATCGCCACATACACACA 59.196 47.619 0.00 0.00 0.00 3.72
23 24 2.073056 TCACAATCGCCACATACACAC 58.927 47.619 0.00 0.00 0.00 3.82
24 25 2.289382 ACTCACAATCGCCACATACACA 60.289 45.455 0.00 0.00 0.00 3.72
25 26 2.094258 CACTCACAATCGCCACATACAC 59.906 50.000 0.00 0.00 0.00 2.90
26 27 2.345876 CACTCACAATCGCCACATACA 58.654 47.619 0.00 0.00 0.00 2.29
27 28 1.665679 CCACTCACAATCGCCACATAC 59.334 52.381 0.00 0.00 0.00 2.39
28 29 1.406751 CCCACTCACAATCGCCACATA 60.407 52.381 0.00 0.00 0.00 2.29
29 30 0.677731 CCCACTCACAATCGCCACAT 60.678 55.000 0.00 0.00 0.00 3.21
30 31 1.302431 CCCACTCACAATCGCCACA 60.302 57.895 0.00 0.00 0.00 4.17
31 32 1.003839 TCCCACTCACAATCGCCAC 60.004 57.895 0.00 0.00 0.00 5.01
32 33 1.296392 CTCCCACTCACAATCGCCA 59.704 57.895 0.00 0.00 0.00 5.69
33 34 1.450312 CCTCCCACTCACAATCGCC 60.450 63.158 0.00 0.00 0.00 5.54
34 35 0.460987 CTCCTCCCACTCACAATCGC 60.461 60.000 0.00 0.00 0.00 4.58
35 36 0.176680 CCTCCTCCCACTCACAATCG 59.823 60.000 0.00 0.00 0.00 3.34
36 37 0.107459 GCCTCCTCCCACTCACAATC 60.107 60.000 0.00 0.00 0.00 2.67
37 38 1.566298 GGCCTCCTCCCACTCACAAT 61.566 60.000 0.00 0.00 0.00 2.71
38 39 2.224159 GGCCTCCTCCCACTCACAA 61.224 63.158 0.00 0.00 0.00 3.33
39 40 2.607750 GGCCTCCTCCCACTCACA 60.608 66.667 0.00 0.00 0.00 3.58
40 41 2.607750 TGGCCTCCTCCCACTCAC 60.608 66.667 3.32 0.00 0.00 3.51
45 46 2.449518 TTGTGTGGCCTCCTCCCA 60.450 61.111 3.32 0.00 0.00 4.37
46 47 2.190488 CTCTTGTGTGGCCTCCTCCC 62.190 65.000 3.32 0.00 0.00 4.30
47 48 1.298014 CTCTTGTGTGGCCTCCTCC 59.702 63.158 3.32 0.00 0.00 4.30
48 49 1.376553 GCTCTTGTGTGGCCTCCTC 60.377 63.158 3.32 0.00 0.00 3.71
49 50 2.753029 GCTCTTGTGTGGCCTCCT 59.247 61.111 3.32 0.00 0.00 3.69
50 51 2.360475 GGCTCTTGTGTGGCCTCC 60.360 66.667 3.32 0.00 42.31 4.30
51 52 2.527951 ATCGGCTCTTGTGTGGCCTC 62.528 60.000 3.32 0.00 43.29 4.70
52 53 2.527951 GATCGGCTCTTGTGTGGCCT 62.528 60.000 3.32 0.00 43.29 5.19
53 54 2.045926 ATCGGCTCTTGTGTGGCC 60.046 61.111 0.00 0.00 42.18 5.36
54 55 1.375908 TGATCGGCTCTTGTGTGGC 60.376 57.895 0.00 0.00 0.00 5.01
55 56 0.320683 TGTGATCGGCTCTTGTGTGG 60.321 55.000 0.00 0.00 0.00 4.17
56 57 0.792640 GTGTGATCGGCTCTTGTGTG 59.207 55.000 0.00 0.00 0.00 3.82
57 58 0.320771 GGTGTGATCGGCTCTTGTGT 60.321 55.000 0.00 0.00 0.00 3.72
58 59 0.320683 TGGTGTGATCGGCTCTTGTG 60.321 55.000 0.00 0.00 0.00 3.33
59 60 0.396435 TTGGTGTGATCGGCTCTTGT 59.604 50.000 0.00 0.00 0.00 3.16
60 61 1.522668 TTTGGTGTGATCGGCTCTTG 58.477 50.000 0.00 0.00 0.00 3.02
61 62 2.359900 GATTTGGTGTGATCGGCTCTT 58.640 47.619 0.00 0.00 0.00 2.85
62 63 1.407437 GGATTTGGTGTGATCGGCTCT 60.407 52.381 0.00 0.00 0.00 4.09
63 64 1.017387 GGATTTGGTGTGATCGGCTC 58.983 55.000 0.00 0.00 0.00 4.70
64 65 0.744414 CGGATTTGGTGTGATCGGCT 60.744 55.000 0.00 0.00 0.00 5.52
65 66 0.742990 TCGGATTTGGTGTGATCGGC 60.743 55.000 0.00 0.00 0.00 5.54
66 67 1.006832 GTCGGATTTGGTGTGATCGG 58.993 55.000 0.00 0.00 0.00 4.18
67 68 1.660607 CTGTCGGATTTGGTGTGATCG 59.339 52.381 0.00 0.00 0.00 3.69
68 69 2.009774 CCTGTCGGATTTGGTGTGATC 58.990 52.381 0.00 0.00 0.00 2.92
69 70 1.628340 TCCTGTCGGATTTGGTGTGAT 59.372 47.619 0.00 0.00 33.30 3.06
70 71 1.052617 TCCTGTCGGATTTGGTGTGA 58.947 50.000 0.00 0.00 33.30 3.58
71 72 1.890876 TTCCTGTCGGATTTGGTGTG 58.109 50.000 0.00 0.00 39.58 3.82
72 73 2.105821 TCTTTCCTGTCGGATTTGGTGT 59.894 45.455 0.00 0.00 39.58 4.16
73 74 2.744202 CTCTTTCCTGTCGGATTTGGTG 59.256 50.000 0.00 0.00 39.58 4.17
74 75 2.290323 CCTCTTTCCTGTCGGATTTGGT 60.290 50.000 0.00 0.00 39.58 3.67
75 76 2.359900 CCTCTTTCCTGTCGGATTTGG 58.640 52.381 0.00 0.00 39.58 3.28
76 77 2.290323 ACCCTCTTTCCTGTCGGATTTG 60.290 50.000 0.00 0.00 39.58 2.32
77 78 1.985895 ACCCTCTTTCCTGTCGGATTT 59.014 47.619 0.00 0.00 39.58 2.17
78 79 1.657804 ACCCTCTTTCCTGTCGGATT 58.342 50.000 0.00 0.00 39.58 3.01
79 80 1.657804 AACCCTCTTTCCTGTCGGAT 58.342 50.000 0.00 0.00 39.58 4.18
80 81 1.430992 AAACCCTCTTTCCTGTCGGA 58.569 50.000 0.00 0.00 37.60 4.55
81 82 3.412237 TTAAACCCTCTTTCCTGTCGG 57.588 47.619 0.00 0.00 0.00 4.79
82 83 3.751698 CCTTTAAACCCTCTTTCCTGTCG 59.248 47.826 0.00 0.00 0.00 4.35
83 84 4.981812 TCCTTTAAACCCTCTTTCCTGTC 58.018 43.478 0.00 0.00 0.00 3.51
84 85 4.750096 GCTCCTTTAAACCCTCTTTCCTGT 60.750 45.833 0.00 0.00 0.00 4.00
85 86 3.759086 GCTCCTTTAAACCCTCTTTCCTG 59.241 47.826 0.00 0.00 0.00 3.86
86 87 3.245300 GGCTCCTTTAAACCCTCTTTCCT 60.245 47.826 0.00 0.00 0.00 3.36
87 88 3.090037 GGCTCCTTTAAACCCTCTTTCC 58.910 50.000 0.00 0.00 0.00 3.13
88 89 3.763057 TGGCTCCTTTAAACCCTCTTTC 58.237 45.455 0.00 0.00 0.00 2.62
89 90 3.895704 TGGCTCCTTTAAACCCTCTTT 57.104 42.857 0.00 0.00 0.00 2.52
90 91 3.895704 TTGGCTCCTTTAAACCCTCTT 57.104 42.857 0.00 0.00 0.00 2.85
91 92 3.895704 TTTGGCTCCTTTAAACCCTCT 57.104 42.857 0.00 0.00 0.00 3.69
92 93 4.086457 TCATTTGGCTCCTTTAAACCCTC 58.914 43.478 0.00 0.00 0.00 4.30
93 94 4.126520 TCATTTGGCTCCTTTAAACCCT 57.873 40.909 0.00 0.00 0.00 4.34
94 95 5.046663 TCAATCATTTGGCTCCTTTAAACCC 60.047 40.000 0.00 0.00 33.44 4.11
95 96 5.869344 GTCAATCATTTGGCTCCTTTAAACC 59.131 40.000 0.00 0.00 34.53 3.27
96 97 6.454795 TGTCAATCATTTGGCTCCTTTAAAC 58.545 36.000 0.00 0.00 38.31 2.01
97 98 6.662865 TGTCAATCATTTGGCTCCTTTAAA 57.337 33.333 0.00 0.00 38.31 1.52
98 99 6.662865 TTGTCAATCATTTGGCTCCTTTAA 57.337 33.333 0.00 0.00 38.31 1.52
99 100 6.267471 ACTTTGTCAATCATTTGGCTCCTTTA 59.733 34.615 0.00 0.00 38.31 1.85
100 101 5.070847 ACTTTGTCAATCATTTGGCTCCTTT 59.929 36.000 0.00 0.00 38.31 3.11
101 102 4.590222 ACTTTGTCAATCATTTGGCTCCTT 59.410 37.500 0.00 0.00 38.31 3.36
102 103 4.021719 CACTTTGTCAATCATTTGGCTCCT 60.022 41.667 0.00 0.00 38.31 3.69
103 104 4.240096 CACTTTGTCAATCATTTGGCTCC 58.760 43.478 0.00 0.00 38.31 4.70
104 105 3.676646 GCACTTTGTCAATCATTTGGCTC 59.323 43.478 0.00 0.00 38.31 4.70
105 106 3.069872 TGCACTTTGTCAATCATTTGGCT 59.930 39.130 0.00 0.00 38.31 4.75
106 107 3.391965 TGCACTTTGTCAATCATTTGGC 58.608 40.909 0.00 0.00 37.97 4.52
107 108 6.548441 AAATGCACTTTGTCAATCATTTGG 57.452 33.333 0.00 0.00 34.19 3.28
121 122 9.646522 AGGGTTAGATTGATAATAAATGCACTT 57.353 29.630 0.00 0.00 0.00 3.16
122 123 9.071276 CAGGGTTAGATTGATAATAAATGCACT 57.929 33.333 0.00 0.00 0.00 4.40
123 124 8.850156 ACAGGGTTAGATTGATAATAAATGCAC 58.150 33.333 0.00 0.00 0.00 4.57
124 125 8.995027 ACAGGGTTAGATTGATAATAAATGCA 57.005 30.769 0.00 0.00 0.00 3.96
125 126 9.066892 TGACAGGGTTAGATTGATAATAAATGC 57.933 33.333 0.00 0.00 0.00 3.56
128 129 9.793259 GGATGACAGGGTTAGATTGATAATAAA 57.207 33.333 0.00 0.00 0.00 1.40
129 130 8.944138 TGGATGACAGGGTTAGATTGATAATAA 58.056 33.333 0.00 0.00 0.00 1.40
130 131 8.504811 TGGATGACAGGGTTAGATTGATAATA 57.495 34.615 0.00 0.00 0.00 0.98
131 132 7.392766 TGGATGACAGGGTTAGATTGATAAT 57.607 36.000 0.00 0.00 0.00 1.28
132 133 6.823286 TGGATGACAGGGTTAGATTGATAA 57.177 37.500 0.00 0.00 0.00 1.75
133 134 6.823286 TTGGATGACAGGGTTAGATTGATA 57.177 37.500 0.00 0.00 0.00 2.15
134 135 5.715439 TTGGATGACAGGGTTAGATTGAT 57.285 39.130 0.00 0.00 0.00 2.57
135 136 5.222027 TGTTTGGATGACAGGGTTAGATTGA 60.222 40.000 0.00 0.00 0.00 2.57
136 137 5.009631 TGTTTGGATGACAGGGTTAGATTG 58.990 41.667 0.00 0.00 0.00 2.67
137 138 5.010282 GTGTTTGGATGACAGGGTTAGATT 58.990 41.667 0.00 0.00 0.00 2.40
138 139 4.567747 GGTGTTTGGATGACAGGGTTAGAT 60.568 45.833 0.00 0.00 0.00 1.98
139 140 3.244770 GGTGTTTGGATGACAGGGTTAGA 60.245 47.826 0.00 0.00 0.00 2.10
140 141 3.081804 GGTGTTTGGATGACAGGGTTAG 58.918 50.000 0.00 0.00 0.00 2.34
141 142 2.714250 AGGTGTTTGGATGACAGGGTTA 59.286 45.455 0.00 0.00 0.00 2.85
142 143 1.499007 AGGTGTTTGGATGACAGGGTT 59.501 47.619 0.00 0.00 0.00 4.11
143 144 1.073923 GAGGTGTTTGGATGACAGGGT 59.926 52.381 0.00 0.00 0.00 4.34
144 145 1.352352 AGAGGTGTTTGGATGACAGGG 59.648 52.381 0.00 0.00 0.00 4.45
145 146 2.867109 AGAGGTGTTTGGATGACAGG 57.133 50.000 0.00 0.00 0.00 4.00
146 147 4.494350 CAAAGAGGTGTTTGGATGACAG 57.506 45.455 0.00 0.00 34.34 3.51
154 155 5.163713 GCTATTCTAGCCAAAGAGGTGTTTG 60.164 44.000 0.00 0.00 45.95 2.93
155 156 4.944317 GCTATTCTAGCCAAAGAGGTGTTT 59.056 41.667 0.00 0.00 45.95 2.83
156 157 4.518249 GCTATTCTAGCCAAAGAGGTGTT 58.482 43.478 0.00 0.00 45.95 3.32
157 158 4.143986 GCTATTCTAGCCAAAGAGGTGT 57.856 45.455 0.00 0.00 45.95 4.16
195 196 9.703677 AGCTAGAGGTTAGAGTTAGTTTCTAAT 57.296 33.333 0.00 0.00 38.85 1.73
198 199 9.531158 TTTAGCTAGAGGTTAGAGTTAGTTTCT 57.469 33.333 0.00 0.00 0.00 2.52
211 212 9.435570 TTGGATACTCTAATTTAGCTAGAGGTT 57.564 33.333 13.67 2.27 44.52 3.50
212 213 9.435570 TTTGGATACTCTAATTTAGCTAGAGGT 57.564 33.333 13.67 3.60 44.52 3.85
217 218 9.793259 CCCATTTTGGATACTCTAATTTAGCTA 57.207 33.333 0.00 0.00 40.96 3.32
218 219 7.231519 GCCCATTTTGGATACTCTAATTTAGCT 59.768 37.037 0.00 0.00 40.96 3.32
219 220 7.371159 GCCCATTTTGGATACTCTAATTTAGC 58.629 38.462 0.00 0.00 40.96 3.09
220 221 7.308589 CGGCCCATTTTGGATACTCTAATTTAG 60.309 40.741 0.00 0.00 40.96 1.85
221 222 6.488683 CGGCCCATTTTGGATACTCTAATTTA 59.511 38.462 0.00 0.00 40.96 1.40
222 223 5.301805 CGGCCCATTTTGGATACTCTAATTT 59.698 40.000 0.00 0.00 40.96 1.82
223 224 4.827284 CGGCCCATTTTGGATACTCTAATT 59.173 41.667 0.00 0.00 40.96 1.40
224 225 4.104102 TCGGCCCATTTTGGATACTCTAAT 59.896 41.667 0.00 0.00 40.96 1.73
225 226 3.456644 TCGGCCCATTTTGGATACTCTAA 59.543 43.478 0.00 0.00 40.96 2.10
226 227 3.042682 TCGGCCCATTTTGGATACTCTA 58.957 45.455 0.00 0.00 40.96 2.43
227 228 1.843851 TCGGCCCATTTTGGATACTCT 59.156 47.619 0.00 0.00 40.96 3.24
228 229 2.341846 TCGGCCCATTTTGGATACTC 57.658 50.000 0.00 0.00 40.96 2.59
229 230 2.241176 TCTTCGGCCCATTTTGGATACT 59.759 45.455 0.00 0.00 40.96 2.12
230 231 2.618709 CTCTTCGGCCCATTTTGGATAC 59.381 50.000 0.00 0.00 40.96 2.24
231 232 2.507886 TCTCTTCGGCCCATTTTGGATA 59.492 45.455 0.00 0.00 40.96 2.59
232 233 1.284785 TCTCTTCGGCCCATTTTGGAT 59.715 47.619 0.00 0.00 40.96 3.41
233 234 0.695924 TCTCTTCGGCCCATTTTGGA 59.304 50.000 0.00 0.00 40.96 3.53
234 235 1.098050 CTCTCTTCGGCCCATTTTGG 58.902 55.000 0.00 0.00 37.25 3.28
235 236 2.113860 TCTCTCTTCGGCCCATTTTG 57.886 50.000 0.00 0.00 0.00 2.44
236 237 4.503714 TTATCTCTCTTCGGCCCATTTT 57.496 40.909 0.00 0.00 0.00 1.82
237 238 4.505742 GGATTATCTCTCTTCGGCCCATTT 60.506 45.833 0.00 0.00 0.00 2.32
238 239 3.008485 GGATTATCTCTCTTCGGCCCATT 59.992 47.826 0.00 0.00 0.00 3.16
239 240 2.569404 GGATTATCTCTCTTCGGCCCAT 59.431 50.000 0.00 0.00 0.00 4.00
240 241 1.971357 GGATTATCTCTCTTCGGCCCA 59.029 52.381 0.00 0.00 0.00 5.36
241 242 1.971357 TGGATTATCTCTCTTCGGCCC 59.029 52.381 0.00 0.00 0.00 5.80
242 243 3.394719 GTTGGATTATCTCTCTTCGGCC 58.605 50.000 0.00 0.00 0.00 6.13
243 244 3.053455 CGTTGGATTATCTCTCTTCGGC 58.947 50.000 0.00 0.00 0.00 5.54
244 245 4.291783 GACGTTGGATTATCTCTCTTCGG 58.708 47.826 0.00 0.00 0.00 4.30
245 246 3.969352 CGACGTTGGATTATCTCTCTTCG 59.031 47.826 0.00 0.00 0.00 3.79
246 247 3.731717 GCGACGTTGGATTATCTCTCTTC 59.268 47.826 4.64 0.00 0.00 2.87
247 248 3.130516 TGCGACGTTGGATTATCTCTCTT 59.869 43.478 4.64 0.00 0.00 2.85
248 249 2.688446 TGCGACGTTGGATTATCTCTCT 59.312 45.455 4.64 0.00 0.00 3.10
249 250 2.789893 GTGCGACGTTGGATTATCTCTC 59.210 50.000 4.64 0.00 0.00 3.20
250 251 2.481449 GGTGCGACGTTGGATTATCTCT 60.481 50.000 4.64 0.00 0.00 3.10
251 252 1.859080 GGTGCGACGTTGGATTATCTC 59.141 52.381 4.64 0.00 0.00 2.75
252 253 1.801395 CGGTGCGACGTTGGATTATCT 60.801 52.381 4.64 0.00 0.00 1.98
253 254 0.575390 CGGTGCGACGTTGGATTATC 59.425 55.000 4.64 0.00 0.00 1.75
254 255 1.426041 GCGGTGCGACGTTGGATTAT 61.426 55.000 4.64 0.00 35.98 1.28
255 256 2.095847 GCGGTGCGACGTTGGATTA 61.096 57.895 4.64 0.00 35.98 1.75
256 257 3.419759 GCGGTGCGACGTTGGATT 61.420 61.111 4.64 0.00 35.98 3.01
306 307 0.523335 CTTTTTGCGCGGATGCTACC 60.523 55.000 8.83 0.00 39.65 3.18
307 308 0.446222 TCTTTTTGCGCGGATGCTAC 59.554 50.000 8.83 0.00 39.65 3.58
318 319 4.693538 TTGTTTTGCCCTTTCTTTTTGC 57.306 36.364 0.00 0.00 0.00 3.68
395 397 1.068816 GGTGTTTTTATGACGCCGCTT 60.069 47.619 0.00 0.00 37.86 4.68
580 588 1.371183 GTGTGTACTGCCTGCCTGA 59.629 57.895 0.00 0.00 0.00 3.86
582 590 1.071471 GTGTGTGTACTGCCTGCCT 59.929 57.895 0.00 0.00 0.00 4.75
588 596 2.538449 GTGTGTGTAGTGTGTGTACTGC 59.462 50.000 0.00 0.00 34.39 4.40
589 597 4.041740 AGTGTGTGTAGTGTGTGTACTG 57.958 45.455 0.00 0.00 32.19 2.74
590 598 4.641541 TGTAGTGTGTGTAGTGTGTGTACT 59.358 41.667 0.00 0.00 34.71 2.73
591 599 4.736793 GTGTAGTGTGTGTAGTGTGTGTAC 59.263 45.833 0.00 0.00 0.00 2.90
592 600 4.398673 TGTGTAGTGTGTGTAGTGTGTGTA 59.601 41.667 0.00 0.00 0.00 2.90
593 601 3.193903 TGTGTAGTGTGTGTAGTGTGTGT 59.806 43.478 0.00 0.00 0.00 3.72
594 602 3.776340 TGTGTAGTGTGTGTAGTGTGTG 58.224 45.455 0.00 0.00 0.00 3.82
595 603 3.446161 ACTGTGTAGTGTGTGTAGTGTGT 59.554 43.478 0.00 0.00 35.34 3.72
596 604 4.041740 ACTGTGTAGTGTGTGTAGTGTG 57.958 45.455 0.00 0.00 35.34 3.82
597 605 5.128205 TCTACTGTGTAGTGTGTGTAGTGT 58.872 41.667 4.89 0.00 37.78 3.55
598 606 5.684550 TCTACTGTGTAGTGTGTGTAGTG 57.315 43.478 4.89 0.00 37.78 2.74
599 607 6.460676 GGTTTCTACTGTGTAGTGTGTGTAGT 60.461 42.308 4.89 0.00 37.78 2.73
600 608 5.919141 GGTTTCTACTGTGTAGTGTGTGTAG 59.081 44.000 4.89 0.00 37.78 2.74
640 648 3.335534 GTGGTGCGGTGTCGTCAC 61.336 66.667 4.07 4.07 43.19 3.67
641 649 4.595538 GGTGGTGCGGTGTCGTCA 62.596 66.667 0.00 0.00 38.89 4.35
642 650 3.876589 ATGGTGGTGCGGTGTCGTC 62.877 63.158 0.00 0.00 38.89 4.20
643 651 3.876589 GATGGTGGTGCGGTGTCGT 62.877 63.158 0.00 0.00 38.89 4.34
644 652 3.118454 GATGGTGGTGCGGTGTCG 61.118 66.667 0.00 0.00 39.81 4.35
645 653 2.031919 TGATGGTGGTGCGGTGTC 59.968 61.111 0.00 0.00 0.00 3.67
646 654 2.281484 GTGATGGTGGTGCGGTGT 60.281 61.111 0.00 0.00 0.00 4.16
909 943 4.825679 GACAGGGGGAGGGGAGGG 62.826 77.778 0.00 0.00 0.00 4.30
921 955 2.802667 CGAGGAATTGCGCGACAGG 61.803 63.158 17.64 0.00 0.00 4.00
1038 1265 1.379309 GAGCTCCTCCGTGTCCTCT 60.379 63.158 0.87 0.00 0.00 3.69
1164 1397 4.500116 GTCCAGAGGTCGAGCGCC 62.500 72.222 14.88 8.24 0.00 6.53
1476 1709 1.592400 CCCTCACCACGAACTCGCTA 61.592 60.000 0.00 0.00 44.43 4.26
1722 1955 2.358615 GCACTGCGGATGGTGTGA 60.359 61.111 0.00 0.00 36.03 3.58
1962 2195 4.041567 TCAGGACTAAACTTGATGCTCCAA 59.958 41.667 0.00 0.00 0.00 3.53
2078 2311 3.073650 AGGATTGCAGGTCCCATTATCTC 59.926 47.826 14.59 0.00 36.36 2.75
2187 2420 0.671781 GACTGTGCAGATCCGTTGCT 60.672 55.000 6.17 0.00 42.02 3.91
2192 2425 1.226802 CTCCGACTGTGCAGATCCG 60.227 63.158 6.17 6.37 0.00 4.18
2267 2500 1.940613 CTGCGAAGGTTATAACAGGCC 59.059 52.381 17.16 0.00 0.00 5.19
2490 2727 7.068061 ACTCCCTCCGTAAAGAAATACTAGAT 58.932 38.462 0.00 0.00 0.00 1.98
2592 2829 0.254178 ACACCAGATCAGGATGCCAC 59.746 55.000 11.72 0.00 34.76 5.01
2630 2867 5.086104 TCCTGAACCAGCTAGATTTACAC 57.914 43.478 0.00 0.00 0.00 2.90
2663 2900 3.904136 AAGTCCTTTGCTTCAACATCG 57.096 42.857 0.00 0.00 0.00 3.84
2678 2915 9.589111 CTCTCAAAAGTCCTAGTTTATAAGTCC 57.411 37.037 0.00 0.00 0.00 3.85
2686 2923 6.211785 CCTACCTCTCTCAAAAGTCCTAGTTT 59.788 42.308 0.00 0.00 0.00 2.66
2753 2990 5.702670 CACCTCTGATCAAGCAAGAAAGTAA 59.297 40.000 0.00 0.00 0.00 2.24
2922 3159 9.710979 ATTAATGTGTATTTGTTACGTATGTGC 57.289 29.630 0.00 0.00 33.15 4.57
3024 3261 7.603024 AGGTTTGTAACTGCTTATACTCTTCAC 59.397 37.037 0.00 0.00 0.00 3.18
3141 3386 4.542662 AATAATGCAGTTTGCTAGAGCG 57.457 40.909 0.00 0.00 45.31 5.03
3260 3505 6.660521 TGCAAAATTTACATGTCTCTCATCCT 59.339 34.615 0.00 0.00 34.09 3.24
3422 3667 4.516698 AGAATGGCCGAAGTAATATGCAAG 59.483 41.667 0.00 0.00 0.00 4.01
3461 3706 2.014093 GAGTGCGCGTATCTGTGTGC 62.014 60.000 8.43 0.00 41.81 4.57
3467 3712 0.732880 GTGTGTGAGTGCGCGTATCT 60.733 55.000 8.43 3.21 0.00 1.98
3495 3740 7.754924 TGAGAAAATCGTCATTTATCCTTTTGC 59.245 33.333 0.00 0.00 31.51 3.68
3496 3741 9.282247 CTGAGAAAATCGTCATTTATCCTTTTG 57.718 33.333 0.00 0.00 31.51 2.44
3622 3868 5.007234 GCACACCATATACAATTCACGCTAA 59.993 40.000 0.00 0.00 0.00 3.09
3685 3931 1.355381 TGACAAGATGGCCAATGTCCT 59.645 47.619 30.86 14.89 41.08 3.85
3686 3932 1.838112 TGACAAGATGGCCAATGTCC 58.162 50.000 30.86 20.21 41.08 4.02
3687 3933 3.940209 TTTGACAAGATGGCCAATGTC 57.060 42.857 29.02 29.02 41.90 3.06
3688 3934 4.686191 TTTTTGACAAGATGGCCAATGT 57.314 36.364 10.96 16.05 0.00 2.71
3706 3952 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
3707 3953 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
3708 3954 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
3709 3955 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
3710 3956 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
3712 3958 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
3713 3959 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
3714 3960 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
3715 3961 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
3716 3962 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
3717 3963 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
3718 3964 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
3719 3965 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
3720 3966 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
3721 3967 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
3722 3968 1.229131 TAGTACTCCCTCCGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
3723 3969 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
3724 3970 2.378378 ATTAGTACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
3725 3971 3.825585 CCTAATTAGTACTCCCTCCGTCC 59.174 52.174 11.50 0.00 0.00 4.79
3726 3972 4.518590 GTCCTAATTAGTACTCCCTCCGTC 59.481 50.000 11.50 0.00 0.00 4.79
3727 3973 4.079558 TGTCCTAATTAGTACTCCCTCCGT 60.080 45.833 11.50 0.00 0.00 4.69
3728 3974 4.467769 TGTCCTAATTAGTACTCCCTCCG 58.532 47.826 11.50 0.00 0.00 4.63
3729 3975 6.239629 CCAATGTCCTAATTAGTACTCCCTCC 60.240 46.154 11.50 0.00 0.00 4.30
3730 3976 6.741801 GCCAATGTCCTAATTAGTACTCCCTC 60.742 46.154 11.50 0.00 0.00 4.30
3731 3977 5.071923 GCCAATGTCCTAATTAGTACTCCCT 59.928 44.000 11.50 0.00 0.00 4.20
3732 3978 5.306394 GCCAATGTCCTAATTAGTACTCCC 58.694 45.833 11.50 0.00 0.00 4.30
3733 3979 5.163237 TGGCCAATGTCCTAATTAGTACTCC 60.163 44.000 0.61 4.95 0.00 3.85
3734 3980 5.925509 TGGCCAATGTCCTAATTAGTACTC 58.074 41.667 0.61 0.32 0.00 2.59
3806 4053 8.046107 AGTTTTATCAATCTTCTCTTCTCTGGG 58.954 37.037 0.00 0.00 0.00 4.45
3862 4128 5.435686 AGTGATGGAGTAATTAACCAGCA 57.564 39.130 19.88 19.88 45.63 4.41
3918 4184 6.809869 ACAAATTTAGATATGCCAAGGAAGC 58.190 36.000 0.00 0.00 0.00 3.86
3943 4209 1.601903 CTGAGTTGGCGCTAAACACAA 59.398 47.619 22.46 9.34 29.63 3.33
3944 4210 1.225855 CTGAGTTGGCGCTAAACACA 58.774 50.000 22.46 20.74 0.00 3.72
3945 4211 1.226746 ACTGAGTTGGCGCTAAACAC 58.773 50.000 22.46 18.10 0.00 3.32
3946 4212 2.823924 TACTGAGTTGGCGCTAAACA 57.176 45.000 22.46 17.52 0.00 2.83
3990 4256 3.186909 CTGTATAACGCACTGCAAGCTA 58.813 45.455 8.90 0.00 37.60 3.32
4080 4346 6.604171 TGATATGGACAGCATGGTAAGAAAT 58.396 36.000 0.00 0.00 43.62 2.17
4084 4350 5.766670 ACAATGATATGGACAGCATGGTAAG 59.233 40.000 0.00 0.00 43.62 2.34
4172 4438 6.786959 AGATCCCTAGAGTTTCTTGCATAGAT 59.213 38.462 0.00 0.00 31.54 1.98
4290 4753 6.897966 GGATAGGTGATTATATCAGAGGTCCA 59.102 42.308 0.00 0.00 40.53 4.02
4480 4943 1.494721 TCACTGTGGGAGAAGGCTTTT 59.505 47.619 8.11 0.00 0.00 2.27
4557 5020 0.807667 GGACAGTGCTATCAGTGCGG 60.808 60.000 1.26 0.00 45.34 5.69
4597 5060 4.143543 TGGATGCAAGTCACTGAATCAAA 58.856 39.130 0.00 0.00 33.48 2.69
4671 5134 4.458397 TCGGTATACTCCAGATTCGAACT 58.542 43.478 0.00 0.00 0.00 3.01
4801 5264 6.695429 TGAACATGCAATAAGCCAATAAACA 58.305 32.000 0.00 0.00 44.83 2.83
4860 5323 3.362040 CCTTGTGGGAGCCAATGAA 57.638 52.632 0.00 0.00 34.18 2.57
5213 5681 9.973450 GAACTATCATTCAGTGTCAGTACATAT 57.027 33.333 0.00 0.00 38.08 1.78
5214 5682 8.414003 GGAACTATCATTCAGTGTCAGTACATA 58.586 37.037 0.00 0.00 38.08 2.29
5307 5775 2.607187 AGTAGTTCGAAGCCATCAACG 58.393 47.619 0.00 0.00 0.00 4.10
5371 5839 8.680001 GCTGAATCAATATGATATGCACCAATA 58.320 33.333 0.00 0.00 35.76 1.90
5425 5893 2.203070 CTAGGTGGATGCGGTGCC 60.203 66.667 0.00 0.00 0.00 5.01
5440 5908 2.844362 CAGGCTCGGGATGGGCTA 60.844 66.667 0.00 0.00 36.58 3.93
5442 5910 4.554036 GTCAGGCTCGGGATGGGC 62.554 72.222 0.00 0.00 0.00 5.36
5497 5980 9.671279 AAGGTTCATTTTCTTGAAAGTTGAAAT 57.329 25.926 17.20 10.97 37.36 2.17
5771 6254 2.698274 TCTATTAGTCATTCTGGCGCCA 59.302 45.455 30.59 30.59 0.00 5.69
5796 6279 4.479786 AGTTATCTTGCTTCCTGGAGAC 57.520 45.455 0.00 0.00 0.00 3.36
5817 6300 0.840617 TTACCAGCCACACAGTCCAA 59.159 50.000 0.00 0.00 0.00 3.53
5905 6388 3.063452 AGTCGCGCCATTGTTACATAAAG 59.937 43.478 0.00 0.00 0.00 1.85
5939 6422 7.249858 GGCTTTGTTTTGTTTTTGTCATCAAT 58.750 30.769 0.00 0.00 33.32 2.57
5985 6468 1.278985 AGCTTGATCAACATCACCGGA 59.721 47.619 9.46 0.00 38.86 5.14
6184 6667 4.916041 ACCTCAGTCAATCCTTCAATGA 57.084 40.909 0.00 0.00 0.00 2.57
6364 6848 2.267324 GCTGCTGGGTGAGAGGAC 59.733 66.667 0.00 0.00 0.00 3.85
6382 6866 3.369147 CAGACAATTGCTACAAGGTCGAG 59.631 47.826 5.05 4.07 0.00 4.04
6405 6889 1.745653 GAGAAAAATGGGAAGGGCGAG 59.254 52.381 0.00 0.00 0.00 5.03
6497 6982 4.253685 CGAATTCTGTCACCCTATGTGTT 58.746 43.478 3.52 0.00 45.61 3.32
6516 7001 0.108585 AGGAAAGCCAGCAGAACGAA 59.891 50.000 0.00 0.00 36.29 3.85
6685 7172 0.391263 GCAGTGCAGGTACTACCCAC 60.391 60.000 11.09 4.36 39.75 4.61
6710 7197 5.246883 AGGCTCATTTTGAGTTTTGGCTTAT 59.753 36.000 6.40 0.00 45.94 1.73
6711 7198 4.588528 AGGCTCATTTTGAGTTTTGGCTTA 59.411 37.500 6.40 0.00 45.94 3.09
6712 7199 3.389002 AGGCTCATTTTGAGTTTTGGCTT 59.611 39.130 6.40 0.00 45.94 4.35
6713 7200 2.967887 AGGCTCATTTTGAGTTTTGGCT 59.032 40.909 6.40 0.00 45.94 4.75
6714 7201 3.391506 AGGCTCATTTTGAGTTTTGGC 57.608 42.857 6.40 0.00 45.94 4.52
6715 7202 5.712152 AGTAGGCTCATTTTGAGTTTTGG 57.288 39.130 6.40 0.00 45.94 3.28
6716 7203 8.514594 TGATAAGTAGGCTCATTTTGAGTTTTG 58.485 33.333 6.40 0.00 45.94 2.44
6717 7204 8.635765 TGATAAGTAGGCTCATTTTGAGTTTT 57.364 30.769 6.40 0.00 45.94 2.43
6718 7205 8.515414 GTTGATAAGTAGGCTCATTTTGAGTTT 58.485 33.333 6.40 0.00 45.94 2.66
6719 7206 7.665559 TGTTGATAAGTAGGCTCATTTTGAGTT 59.334 33.333 6.40 0.00 45.94 3.01
6720 7207 7.168219 TGTTGATAAGTAGGCTCATTTTGAGT 58.832 34.615 6.40 0.00 45.94 3.41
6739 7226 2.421073 CCACAGATGATGCGTTGTTGAT 59.579 45.455 0.00 0.00 0.00 2.57
6745 7232 1.806542 GTTGACCACAGATGATGCGTT 59.193 47.619 0.00 0.00 0.00 4.84
6771 7261 3.186119 GACATCTCGCTTCTCCTGAAAG 58.814 50.000 0.00 0.00 0.00 2.62
6787 7277 1.852895 GCGGTTACGTCTGATGACATC 59.147 52.381 8.59 8.59 43.06 3.06
6808 7298 2.579201 GCTCTGTAGCCTTCGCCA 59.421 61.111 0.00 0.00 43.40 5.69
6876 7366 4.108501 TGCCGGAGAGATATACAGGTTA 57.891 45.455 5.05 0.00 0.00 2.85
6878 7368 2.677542 TGCCGGAGAGATATACAGGT 57.322 50.000 5.05 0.00 0.00 4.00
6879 7369 4.248859 CATTTGCCGGAGAGATATACAGG 58.751 47.826 5.05 0.00 0.00 4.00
6882 7372 4.246458 GGACATTTGCCGGAGAGATATAC 58.754 47.826 5.05 0.00 0.00 1.47
6883 7373 3.901222 TGGACATTTGCCGGAGAGATATA 59.099 43.478 5.05 0.00 0.00 0.86
6884 7374 2.705658 TGGACATTTGCCGGAGAGATAT 59.294 45.455 5.05 0.00 0.00 1.63
6885 7375 2.115427 TGGACATTTGCCGGAGAGATA 58.885 47.619 5.05 0.00 0.00 1.98
6886 7376 0.911769 TGGACATTTGCCGGAGAGAT 59.088 50.000 5.05 0.00 0.00 2.75
6887 7377 0.911769 ATGGACATTTGCCGGAGAGA 59.088 50.000 5.05 0.00 0.00 3.10
6888 7378 1.755179 AATGGACATTTGCCGGAGAG 58.245 50.000 5.05 0.00 0.00 3.20
6889 7379 2.214376 AAATGGACATTTGCCGGAGA 57.786 45.000 5.05 0.00 39.36 3.71
6890 7380 3.317603 AAAAATGGACATTTGCCGGAG 57.682 42.857 5.05 0.00 40.57 4.63
6891 7381 3.366476 CGTAAAAATGGACATTTGCCGGA 60.366 43.478 5.05 0.00 40.57 5.14
6892 7382 2.920490 CGTAAAAATGGACATTTGCCGG 59.080 45.455 10.71 0.00 40.57 6.13
6893 7383 3.363426 CACGTAAAAATGGACATTTGCCG 59.637 43.478 10.71 13.87 40.57 5.69
6894 7384 3.677596 CCACGTAAAAATGGACATTTGCC 59.322 43.478 10.71 2.36 40.57 4.52
6895 7385 4.303282 ACCACGTAAAAATGGACATTTGC 58.697 39.130 10.71 4.67 40.57 3.68
6896 7386 4.920927 GGACCACGTAAAAATGGACATTTG 59.079 41.667 10.71 1.97 40.57 2.32
6898 7388 3.189702 CGGACCACGTAAAAATGGACATT 59.810 43.478 0.00 0.00 39.46 2.71
6899 7389 2.745281 CGGACCACGTAAAAATGGACAT 59.255 45.455 0.00 0.00 39.46 3.06
6900 7390 2.144730 CGGACCACGTAAAAATGGACA 58.855 47.619 0.00 0.00 39.46 4.02
6901 7391 1.465777 CCGGACCACGTAAAAATGGAC 59.534 52.381 0.00 0.00 42.24 4.02
6902 7392 1.347050 TCCGGACCACGTAAAAATGGA 59.653 47.619 0.00 0.00 42.24 3.41
6903 7393 1.735571 CTCCGGACCACGTAAAAATGG 59.264 52.381 0.00 0.00 42.24 3.16
6905 7395 2.301009 AGTCTCCGGACCACGTAAAAAT 59.699 45.455 0.00 0.00 43.05 1.82
6907 7397 1.000060 CAGTCTCCGGACCACGTAAAA 60.000 52.381 0.00 0.00 43.05 1.52
6908 7398 0.599558 CAGTCTCCGGACCACGTAAA 59.400 55.000 0.00 0.00 43.05 2.01
6909 7399 0.250858 TCAGTCTCCGGACCACGTAA 60.251 55.000 0.00 0.00 43.05 3.18
6910 7400 0.034767 ATCAGTCTCCGGACCACGTA 60.035 55.000 0.00 0.00 43.05 3.57
6912 7402 0.381089 GTATCAGTCTCCGGACCACG 59.619 60.000 0.00 0.00 43.05 4.94
6913 7403 0.381089 CGTATCAGTCTCCGGACCAC 59.619 60.000 0.00 0.00 43.05 4.16
6914 7404 0.750546 CCGTATCAGTCTCCGGACCA 60.751 60.000 0.00 0.00 43.01 4.02
6925 7438 1.490693 ATTGCGCGCTTCCGTATCAG 61.491 55.000 33.29 0.00 36.67 2.90
6942 7455 3.008704 ACCTTTACGGCTAGTGTTGGATT 59.991 43.478 0.00 0.00 35.61 3.01
6944 7457 1.972795 ACCTTTACGGCTAGTGTTGGA 59.027 47.619 0.00 0.00 35.61 3.53
6947 7460 3.396560 GTCAACCTTTACGGCTAGTGTT 58.603 45.455 0.00 0.00 35.61 3.32
6948 7461 2.289257 GGTCAACCTTTACGGCTAGTGT 60.289 50.000 0.00 0.00 35.61 3.55
6949 7462 2.028385 AGGTCAACCTTTACGGCTAGTG 60.028 50.000 0.00 0.00 46.09 2.74
6950 7463 2.254508 AGGTCAACCTTTACGGCTAGT 58.745 47.619 0.00 0.00 46.09 2.57
7004 7517 1.208535 TGTGTATTACCTCGCCCCAAG 59.791 52.381 0.00 0.00 0.00 3.61
7005 7518 1.277579 TGTGTATTACCTCGCCCCAA 58.722 50.000 0.00 0.00 0.00 4.12
7008 7521 1.135024 TCGTTGTGTATTACCTCGCCC 60.135 52.381 0.00 0.00 0.00 6.13
7083 7610 3.495543 GCAAGGCTGCTGCTACTC 58.504 61.111 15.64 0.00 45.74 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.