Multiple sequence alignment - TraesCS6B01G262100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G262100 chr6B 100.000 4264 0 0 1 4264 472233061 472237324 0.000000e+00 7875.0
1 TraesCS6B01G262100 chr6B 91.489 94 7 1 525 618 544634132 544634224 1.240000e-25 128.0
2 TraesCS6B01G262100 chr6D 94.063 1499 69 7 2123 3620 305074101 305072622 0.000000e+00 2257.0
3 TraesCS6B01G262100 chr6D 94.772 1358 40 8 617 1943 305076078 305074721 0.000000e+00 2085.0
4 TraesCS6B01G262100 chr6D 93.345 556 31 4 1 553 305076771 305076219 0.000000e+00 817.0
5 TraesCS6B01G262100 chr6D 86.784 454 49 9 3620 4066 305072535 305072086 2.960000e-136 496.0
6 TraesCS6B01G262100 chr6D 91.304 92 8 0 527 618 136466301 136466392 4.480000e-25 126.0
7 TraesCS6B01G262100 chr6A 94.478 1340 63 4 2123 3455 409797962 409799297 0.000000e+00 2054.0
8 TraesCS6B01G262100 chr6A 93.625 1349 50 17 617 1932 409796202 409797547 0.000000e+00 1982.0
9 TraesCS6B01G262100 chr6A 93.633 534 31 3 1 534 409795673 409796203 0.000000e+00 795.0
10 TraesCS6B01G262100 chr6A 86.784 454 43 8 3620 4066 409799722 409800165 1.380000e-134 490.0
11 TraesCS6B01G262100 chr6A 95.000 60 3 0 3561 3620 409799569 409799628 1.260000e-15 95.3
12 TraesCS6B01G262100 chr2D 77.922 462 71 21 965 1415 476762487 476762928 4.230000e-65 259.0
13 TraesCS6B01G262100 chr2B 77.778 459 68 25 963 1407 558044713 558044275 7.080000e-63 252.0
14 TraesCS6B01G262100 chr2B 91.579 95 7 1 532 626 165067800 165067707 3.460000e-26 130.0
15 TraesCS6B01G262100 chr2A 76.392 449 59 32 963 1383 618989228 618989657 9.350000e-47 198.0
16 TraesCS6B01G262100 chr7B 83.568 213 21 7 4065 4264 539773523 539773312 2.020000e-43 187.0
17 TraesCS6B01G262100 chr7B 82.381 210 23 7 4067 4264 60583356 60583563 2.040000e-38 171.0
18 TraesCS6B01G262100 chr3B 83.568 213 21 7 4065 4264 102817129 102817340 2.020000e-43 187.0
19 TraesCS6B01G262100 chr3B 87.619 105 12 1 529 632 20433636 20433740 2.080000e-23 121.0
20 TraesCS6B01G262100 chr7D 83.333 210 22 6 4065 4262 299720457 299720665 9.420000e-42 182.0
21 TraesCS6B01G262100 chr7D 93.333 90 6 0 531 620 163058922 163058833 2.670000e-27 134.0
22 TraesCS6B01G262100 chr1A 82.857 210 24 5 4065 4262 463854535 463854326 1.220000e-40 178.0
23 TraesCS6B01G262100 chr1A 82.381 210 24 6 4065 4262 119732541 119732333 2.040000e-38 171.0
24 TraesCS6B01G262100 chr7A 82.381 210 24 6 4065 4262 608322429 608322221 2.040000e-38 171.0
25 TraesCS6B01G262100 chr7A 91.579 95 8 0 528 622 208523672 208523766 9.620000e-27 132.0
26 TraesCS6B01G262100 chr7A 92.308 91 7 0 531 621 643550143 643550233 3.460000e-26 130.0
27 TraesCS6B01G262100 chr7A 93.478 46 3 0 969 1014 26978354 26978309 7.650000e-08 69.4
28 TraesCS6B01G262100 chr1B 81.860 215 24 8 4063 4264 97188139 97187927 2.640000e-37 167.0
29 TraesCS6B01G262100 chr5B 85.714 154 17 5 4113 4264 214084601 214084751 1.590000e-34 158.0
30 TraesCS6B01G262100 chr5B 85.246 61 7 2 969 1028 576242905 576242964 1.280000e-05 62.1
31 TraesCS6B01G262100 chr5D 92.308 91 7 0 531 621 312853978 312854068 3.460000e-26 130.0
32 TraesCS6B01G262100 chr5D 84.058 69 9 2 969 1036 469269571 469269638 9.900000e-07 65.8
33 TraesCS6B01G262100 chr4B 88.073 109 9 3 516 622 518087241 518087135 4.480000e-25 126.0
34 TraesCS6B01G262100 chrUn 97.561 41 0 1 1990 2029 2932256 2932216 7.650000e-08 69.4
35 TraesCS6B01G262100 chrUn 97.561 41 0 1 1990 2029 322380880 322380920 7.650000e-08 69.4
36 TraesCS6B01G262100 chrUn 97.561 41 0 1 1990 2029 351570529 351570489 7.650000e-08 69.4
37 TraesCS6B01G262100 chr5A 85.246 61 7 2 969 1028 589366399 589366458 1.280000e-05 62.1
38 TraesCS6B01G262100 chr5A 82.609 69 10 2 969 1036 589334705 589334772 4.600000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G262100 chr6B 472233061 472237324 4263 False 7875.00 7875 100.000 1 4264 1 chr6B.!!$F1 4263
1 TraesCS6B01G262100 chr6D 305072086 305076771 4685 True 1413.75 2257 92.241 1 4066 4 chr6D.!!$R1 4065
2 TraesCS6B01G262100 chr6A 409795673 409800165 4492 False 1083.26 2054 92.704 1 4066 5 chr6A.!!$F1 4065

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
456 458 0.882927 GTCCCTGTTGCAACGCACTA 60.883 55.0 23.79 5.75 38.71 2.74 F
2091 3031 0.037790 GACTCCCTGTCTGTCTGTGC 60.038 60.0 0.00 0.00 42.21 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2360 3308 0.040067 CAAGTTGCAAGTCTTCGGGC 60.040 55.0 7.36 0.00 0.00 6.13 R
3789 4997 0.262580 ATCACCCCCAACATCCATGG 59.737 55.0 4.97 4.97 37.71 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 52 1.082206 CCACCTCCTCCCCCAGTTA 59.918 63.158 0.00 0.00 0.00 2.24
91 93 6.046593 CCCCTTCACTTTGGTTTACTTTTTC 58.953 40.000 0.00 0.00 0.00 2.29
186 188 5.533482 TGTTGATAATTTCCAAAACCACGG 58.467 37.500 0.00 0.00 0.00 4.94
201 203 3.620488 ACCACGGCATTCATTAACTCAT 58.380 40.909 0.00 0.00 0.00 2.90
284 286 5.742562 TCCCTACCCATAACCAAATCAAT 57.257 39.130 0.00 0.00 0.00 2.57
287 289 5.304357 CCCTACCCATAACCAAATCAATTCC 59.696 44.000 0.00 0.00 0.00 3.01
351 353 9.535878 CTTATCTTCTCTTACCCATACTCAAAC 57.464 37.037 0.00 0.00 0.00 2.93
352 354 7.741554 ATCTTCTCTTACCCATACTCAAACT 57.258 36.000 0.00 0.00 0.00 2.66
405 407 5.237996 CGATGAGTGTAGGTATAAGTCGGAA 59.762 44.000 0.00 0.00 0.00 4.30
409 411 8.162878 TGAGTGTAGGTATAAGTCGGAAATAG 57.837 38.462 0.00 0.00 0.00 1.73
456 458 0.882927 GTCCCTGTTGCAACGCACTA 60.883 55.000 23.79 5.75 38.71 2.74
541 546 5.071115 GTGGAATTAATCTGCTACTCCCTCT 59.929 44.000 0.00 0.00 0.00 3.69
542 547 5.070981 TGGAATTAATCTGCTACTCCCTCTG 59.929 44.000 0.00 0.00 0.00 3.35
545 550 6.567602 ATTAATCTGCTACTCCCTCTGTTT 57.432 37.500 0.00 0.00 0.00 2.83
547 552 2.889512 TCTGCTACTCCCTCTGTTTCA 58.110 47.619 0.00 0.00 0.00 2.69
553 558 6.173339 TGCTACTCCCTCTGTTTCAAAATAG 58.827 40.000 0.00 0.00 0.00 1.73
555 560 7.051000 GCTACTCCCTCTGTTTCAAAATAGAT 58.949 38.462 2.91 0.00 35.92 1.98
557 562 7.020827 ACTCCCTCTGTTTCAAAATAGATGA 57.979 36.000 2.91 3.20 35.92 2.92
559 564 6.180472 TCCCTCTGTTTCAAAATAGATGACC 58.820 40.000 2.91 0.00 35.92 4.02
560 565 5.358160 CCCTCTGTTTCAAAATAGATGACCC 59.642 44.000 2.91 0.00 35.92 4.46
561 566 5.945784 CCTCTGTTTCAAAATAGATGACCCA 59.054 40.000 2.91 0.00 35.92 4.51
562 567 6.434028 CCTCTGTTTCAAAATAGATGACCCAA 59.566 38.462 2.91 0.00 35.92 4.12
563 568 7.214467 TCTGTTTCAAAATAGATGACCCAAC 57.786 36.000 0.00 0.00 32.24 3.77
564 569 7.004086 TCTGTTTCAAAATAGATGACCCAACT 58.996 34.615 0.00 0.00 32.24 3.16
565 570 7.505585 TCTGTTTCAAAATAGATGACCCAACTT 59.494 33.333 0.00 0.00 32.24 2.66
566 571 8.017418 TGTTTCAAAATAGATGACCCAACTTT 57.983 30.769 0.00 0.00 0.00 2.66
567 572 9.137459 TGTTTCAAAATAGATGACCCAACTTTA 57.863 29.630 0.00 0.00 0.00 1.85
611 693 8.482128 AGTTGGGTCATTTATTTTGAAACTGAA 58.518 29.630 0.00 0.00 0.00 3.02
613 695 8.243961 TGGGTCATTTATTTTGAAACTGAAGA 57.756 30.769 0.00 0.00 0.00 2.87
615 697 9.196552 GGGTCATTTATTTTGAAACTGAAGAAG 57.803 33.333 0.00 0.00 0.00 2.85
628 710 7.877612 TGAAACTGAAGAAGTAGATATGTGCAA 59.122 33.333 0.00 0.00 38.56 4.08
629 711 8.798859 AAACTGAAGAAGTAGATATGTGCAAT 57.201 30.769 0.00 0.00 38.56 3.56
688 770 6.805713 ACCGGAAATGAATAAAACATGGATC 58.194 36.000 9.46 0.00 0.00 3.36
836 922 1.369625 GCGAATCAGAAATCCCACGT 58.630 50.000 0.00 0.00 0.00 4.49
868 956 4.551990 CGCGCGGACACATCTTTAAATATT 60.552 41.667 24.84 0.00 0.00 1.28
956 1045 3.062466 CAGAGCTCGTCGACCCCA 61.062 66.667 10.58 0.00 0.00 4.96
1404 1494 2.505819 TCTTAGCAAGGGGTTCATCTCC 59.494 50.000 0.00 0.00 36.82 3.71
1703 1819 6.196353 CGTTTAGTGCATTGTAATTGTATGGC 59.804 38.462 0.00 0.00 0.00 4.40
1903 2019 0.449786 TCGGCACATAAAACGGCATG 59.550 50.000 0.00 0.00 0.00 4.06
1943 2060 2.310233 CGATCGGCGTGCCCTTATG 61.310 63.158 7.38 0.00 34.64 1.90
1944 2061 2.591715 ATCGGCGTGCCCTTATGC 60.592 61.111 6.85 0.00 0.00 3.14
1954 2071 1.818060 TGCCCTTATGCACACAATCAC 59.182 47.619 0.00 0.00 36.04 3.06
1970 2590 6.097270 ACACAATCACATAAATTGGCATAGCT 59.903 34.615 0.00 0.00 38.23 3.32
1980 2600 9.754382 CATAAATTGGCATAGCTTGAATTTAGT 57.246 29.630 0.00 0.00 33.03 2.24
1989 2609 7.010183 GCATAGCTTGAATTTAGTACGTCTGAA 59.990 37.037 0.00 0.00 0.00 3.02
1992 2612 8.324163 AGCTTGAATTTAGTACGTCTGAATTT 57.676 30.769 14.32 2.81 40.70 1.82
1993 2613 8.784043 AGCTTGAATTTAGTACGTCTGAATTTT 58.216 29.630 14.32 1.27 40.70 1.82
1994 2614 9.394477 GCTTGAATTTAGTACGTCTGAATTTTT 57.606 29.630 14.32 0.77 40.70 1.94
1998 2618 9.543018 GAATTTAGTACGTCTGAATTTTTGAGG 57.457 33.333 14.32 0.00 40.70 3.86
1999 2619 8.842358 ATTTAGTACGTCTGAATTTTTGAGGA 57.158 30.769 0.00 0.00 29.80 3.71
2000 2620 8.665643 TTTAGTACGTCTGAATTTTTGAGGAA 57.334 30.769 0.00 0.00 0.00 3.36
2001 2621 6.541111 AGTACGTCTGAATTTTTGAGGAAC 57.459 37.500 0.00 0.00 0.00 3.62
2002 2622 4.468095 ACGTCTGAATTTTTGAGGAACG 57.532 40.909 0.00 0.00 0.00 3.95
2003 2623 3.875134 ACGTCTGAATTTTTGAGGAACGT 59.125 39.130 0.00 0.00 0.00 3.99
2004 2624 4.025145 ACGTCTGAATTTTTGAGGAACGTC 60.025 41.667 0.00 0.00 0.00 4.34
2066 3006 1.138247 GGGCATTTCAAGCGCAGAG 59.862 57.895 11.47 0.00 43.54 3.35
2078 3018 4.828925 GCAGAGCCGCAGACTCCC 62.829 72.222 0.00 0.00 34.56 4.30
2079 3019 3.073735 CAGAGCCGCAGACTCCCT 61.074 66.667 0.00 0.00 34.56 4.20
2080 3020 3.073735 AGAGCCGCAGACTCCCTG 61.074 66.667 0.00 0.00 45.67 4.45
2081 3021 3.386237 GAGCCGCAGACTCCCTGT 61.386 66.667 0.00 0.00 44.71 4.00
2082 3022 3.363844 GAGCCGCAGACTCCCTGTC 62.364 68.421 0.00 0.00 44.71 3.51
2091 3031 0.037790 GACTCCCTGTCTGTCTGTGC 60.038 60.000 0.00 0.00 42.21 4.57
2092 3032 1.294780 CTCCCTGTCTGTCTGTGCC 59.705 63.158 0.00 0.00 0.00 5.01
2093 3033 1.152247 TCCCTGTCTGTCTGTGCCT 60.152 57.895 0.00 0.00 0.00 4.75
2094 3034 1.188219 TCCCTGTCTGTCTGTGCCTC 61.188 60.000 0.00 0.00 0.00 4.70
2095 3035 1.294780 CCTGTCTGTCTGTGCCTCC 59.705 63.158 0.00 0.00 0.00 4.30
2096 3036 1.190833 CCTGTCTGTCTGTGCCTCCT 61.191 60.000 0.00 0.00 0.00 3.69
2097 3037 0.246086 CTGTCTGTCTGTGCCTCCTC 59.754 60.000 0.00 0.00 0.00 3.71
2098 3038 0.178950 TGTCTGTCTGTGCCTCCTCT 60.179 55.000 0.00 0.00 0.00 3.69
2099 3039 1.075536 TGTCTGTCTGTGCCTCCTCTA 59.924 52.381 0.00 0.00 0.00 2.43
2100 3040 1.748493 GTCTGTCTGTGCCTCCTCTAG 59.252 57.143 0.00 0.00 0.00 2.43
2101 3041 1.356059 TCTGTCTGTGCCTCCTCTAGT 59.644 52.381 0.00 0.00 0.00 2.57
2102 3042 2.175202 CTGTCTGTGCCTCCTCTAGTT 58.825 52.381 0.00 0.00 0.00 2.24
2103 3043 2.564947 CTGTCTGTGCCTCCTCTAGTTT 59.435 50.000 0.00 0.00 0.00 2.66
2104 3044 2.300152 TGTCTGTGCCTCCTCTAGTTTG 59.700 50.000 0.00 0.00 0.00 2.93
2105 3045 1.902508 TCTGTGCCTCCTCTAGTTTGG 59.097 52.381 0.00 0.00 0.00 3.28
2106 3046 0.324943 TGTGCCTCCTCTAGTTTGGC 59.675 55.000 10.31 10.31 43.49 4.52
2107 3047 0.393132 GTGCCTCCTCTAGTTTGGCC 60.393 60.000 0.00 0.00 42.62 5.36
2108 3048 1.224870 GCCTCCTCTAGTTTGGCCC 59.775 63.158 0.00 0.00 37.81 5.80
2109 3049 1.275421 GCCTCCTCTAGTTTGGCCCT 61.275 60.000 0.00 0.00 37.81 5.19
2110 3050 0.543749 CCTCCTCTAGTTTGGCCCTG 59.456 60.000 0.00 0.00 0.00 4.45
2111 3051 0.107459 CTCCTCTAGTTTGGCCCTGC 60.107 60.000 0.00 0.00 0.00 4.85
2112 3052 0.547712 TCCTCTAGTTTGGCCCTGCT 60.548 55.000 0.00 0.00 0.00 4.24
2113 3053 0.393537 CCTCTAGTTTGGCCCTGCTG 60.394 60.000 0.00 0.00 0.00 4.41
2114 3054 0.615331 CTCTAGTTTGGCCCTGCTGA 59.385 55.000 0.00 0.00 0.00 4.26
2115 3055 1.211457 CTCTAGTTTGGCCCTGCTGAT 59.789 52.381 0.00 0.00 0.00 2.90
2116 3056 1.065199 TCTAGTTTGGCCCTGCTGATG 60.065 52.381 0.00 0.00 0.00 3.07
2117 3057 0.991146 TAGTTTGGCCCTGCTGATGA 59.009 50.000 0.00 0.00 0.00 2.92
2118 3058 0.323178 AGTTTGGCCCTGCTGATGAG 60.323 55.000 0.00 0.00 0.00 2.90
2119 3059 0.610232 GTTTGGCCCTGCTGATGAGT 60.610 55.000 0.00 0.00 0.00 3.41
2120 3060 0.991146 TTTGGCCCTGCTGATGAGTA 59.009 50.000 0.00 0.00 0.00 2.59
2121 3061 0.253044 TTGGCCCTGCTGATGAGTAC 59.747 55.000 0.00 0.00 0.00 2.73
2136 3076 7.246674 TGATGAGTACAACAAAGTTGACTTC 57.753 36.000 15.99 9.92 34.61 3.01
2139 3079 5.584649 TGAGTACAACAAAGTTGACTTCAGG 59.415 40.000 15.99 0.00 34.61 3.86
2142 3082 7.107542 AGTACAACAAAGTTGACTTCAGGTTA 58.892 34.615 15.99 0.00 34.61 2.85
2170 3110 3.291584 TGAGCTATCAATCACCGAGTCT 58.708 45.455 0.00 0.00 30.61 3.24
2174 3114 0.179000 ATCAATCACCGAGTCTGCCC 59.821 55.000 0.00 0.00 0.00 5.36
2196 3136 1.453524 CGTTATCAGATAGCAGCACGC 59.546 52.381 5.25 0.00 42.91 5.34
2210 3157 1.160329 GCACGCAGACCTGAACAAGT 61.160 55.000 0.47 0.00 0.00 3.16
2219 3166 6.293190 CGCAGACCTGAACAAGTAATTGTTTA 60.293 38.462 21.01 16.30 44.37 2.01
2223 3170 5.537295 ACCTGAACAAGTAATTGTTTACCCC 59.463 40.000 21.01 9.56 44.37 4.95
2236 3183 8.766000 AATTGTTTACCCCGTTTTATTTCATC 57.234 30.769 0.00 0.00 0.00 2.92
2257 3204 9.787532 TTCATCTGTTTGTTCTTCACTAAAAAG 57.212 29.630 0.00 0.00 0.00 2.27
2291 3239 0.388294 GGTACGCAGGTAGTCCCATC 59.612 60.000 0.00 0.00 34.66 3.51
2304 3252 0.752009 TCCCATCTCGACGGAAGGAG 60.752 60.000 8.55 0.00 0.00 3.69
2315 3263 2.801111 GACGGAAGGAGTCAACAAAGAC 59.199 50.000 0.00 0.00 38.42 3.01
2357 3305 2.051345 GCAAACAACCTCCGCGTG 60.051 61.111 4.92 0.00 0.00 5.34
2360 3308 2.184167 AAACAACCTCCGCGTGGTG 61.184 57.895 19.37 12.88 37.93 4.17
2721 3669 1.535444 TCTTTCGGGAGCTGGGTCA 60.535 57.895 0.00 0.00 0.00 4.02
2796 3744 2.203437 GGCCGTTCCTGTGGGTTT 60.203 61.111 0.00 0.00 0.00 3.27
2803 3751 2.290641 CGTTCCTGTGGGTTTTGAAGAG 59.709 50.000 0.00 0.00 0.00 2.85
2939 3887 1.982395 CTACCTCACCCACTGCGGA 60.982 63.158 0.00 0.00 36.56 5.54
3032 3980 2.370281 TCAACTCTGCCTTCATCGTC 57.630 50.000 0.00 0.00 0.00 4.20
3063 4011 1.484444 AATAGGGATCAGGCTCCGGC 61.484 60.000 0.00 0.00 36.05 6.13
3098 4046 4.857588 GGCGACGTGAAAGATTATATCGAT 59.142 41.667 2.16 2.16 0.00 3.59
3099 4047 5.003590 GGCGACGTGAAAGATTATATCGATC 59.996 44.000 0.00 0.00 0.00 3.69
3290 4238 6.837471 AACTAGAAGAGTTCGACCTAATGT 57.163 37.500 0.00 0.00 45.81 2.71
3343 4291 5.079689 TCGACAAGGTTTATGCTGACATA 57.920 39.130 0.00 0.00 37.74 2.29
3425 4373 9.639601 TGATCAGTAACATCGTATCCATATTTC 57.360 33.333 0.00 0.00 0.00 2.17
3431 4379 9.436957 GTAACATCGTATCCATATTTCCAATCT 57.563 33.333 0.00 0.00 0.00 2.40
3445 4393 2.886523 TCCAATCTGTTTGCAAGGTGAG 59.113 45.455 0.00 0.00 33.73 3.51
3507 4455 3.571590 TGGTGGCCACTCTTTATTGTTT 58.428 40.909 33.91 0.00 0.00 2.83
3515 4463 6.015772 GGCCACTCTTTATTGTTTTTGGAGTA 60.016 38.462 0.00 0.00 32.36 2.59
3575 4689 7.490725 CACAAATTGACAAGGTTGACACATAAA 59.509 33.333 17.07 0.00 32.94 1.40
3625 4833 1.255882 ATGGCGGCACAAGATCAAAA 58.744 45.000 16.34 0.00 0.00 2.44
3634 4842 5.796935 CGGCACAAGATCAAAAGTCTAAATG 59.203 40.000 0.00 0.00 0.00 2.32
3655 4863 3.004210 TGAGAGATAATGAGCTCGACTGC 59.996 47.826 9.64 0.00 43.19 4.40
3660 4868 0.740164 AATGAGCTCGACTGCAGCAG 60.740 55.000 21.54 21.54 39.56 4.24
3708 4916 2.040178 CCTTGGTATTCCTAGCGTCCT 58.960 52.381 0.00 0.00 35.73 3.85
3766 4974 3.073274 AGCCAAATGGTCAAGACTACC 57.927 47.619 0.71 0.00 37.57 3.18
3802 5010 0.538118 CAAAGGCCATGGATGTTGGG 59.462 55.000 18.40 0.00 34.66 4.12
3826 5034 5.542635 GGGTGATGAGAGTAATACCCATACA 59.457 44.000 0.00 0.00 45.53 2.29
3830 5038 7.118390 GTGATGAGAGTAATACCCATACATTGC 59.882 40.741 0.00 0.00 0.00 3.56
3837 5045 1.691196 ACCCATACATTGCCCGATTG 58.309 50.000 0.00 0.00 0.00 2.67
3840 5048 2.023673 CCATACATTGCCCGATTGTGT 58.976 47.619 0.00 0.00 0.00 3.72
3853 5061 0.687354 ATTGTGTCGGACTTGAGGCT 59.313 50.000 9.88 0.00 0.00 4.58
3893 5102 2.287909 GGCATCCTCTATGTGACGAGAC 60.288 54.545 0.00 0.00 37.93 3.36
3901 5110 0.976641 ATGTGACGAGACACCATGGT 59.023 50.000 13.00 13.00 39.69 3.55
3909 5118 2.430694 CGAGACACCATGGTCATTCCTA 59.569 50.000 16.53 0.00 40.29 2.94
3918 5127 2.626785 TGGTCATTCCTAGTTGGTGGA 58.373 47.619 0.00 0.00 37.07 4.02
3919 5128 2.571653 TGGTCATTCCTAGTTGGTGGAG 59.428 50.000 0.00 0.00 37.07 3.86
3923 5132 5.453480 GGTCATTCCTAGTTGGTGGAGATAC 60.453 48.000 0.00 0.00 37.07 2.24
3956 5165 0.037232 GCTGGCTCGAGTGTTAAGGT 60.037 55.000 15.13 0.00 0.00 3.50
3982 5191 2.035066 GCGGAATAGAAGCCATGCAAAT 59.965 45.455 0.00 0.00 0.00 2.32
3984 5193 4.082571 GCGGAATAGAAGCCATGCAAATAT 60.083 41.667 0.00 0.00 0.00 1.28
3985 5194 5.565439 GCGGAATAGAAGCCATGCAAATATT 60.565 40.000 0.00 0.00 0.00 1.28
3986 5195 5.860182 CGGAATAGAAGCCATGCAAATATTG 59.140 40.000 0.00 0.00 0.00 1.90
3987 5196 6.294120 CGGAATAGAAGCCATGCAAATATTGA 60.294 38.462 0.00 0.00 0.00 2.57
3988 5197 6.865205 GGAATAGAAGCCATGCAAATATTGAC 59.135 38.462 0.00 0.00 0.00 3.18
3999 5211 8.092068 CCATGCAAATATTGACATGTTGGATAT 58.908 33.333 20.93 2.04 40.40 1.63
4001 5213 9.701098 ATGCAAATATTGACATGTTGGATATTC 57.299 29.630 16.18 9.76 0.00 1.75
4012 5224 3.200483 GTTGGATATTCGTGTACCCCAC 58.800 50.000 0.00 0.00 40.89 4.61
4048 5260 1.947456 GTGTCTTGTTCTGGTTCCCAC 59.053 52.381 0.00 0.00 0.00 4.61
4054 5268 1.774254 TGTTCTGGTTCCCACAGTGAT 59.226 47.619 0.62 0.00 37.25 3.06
4063 5277 2.615391 TCCCACAGTGATGTTGTAGGA 58.385 47.619 0.62 0.00 34.61 2.94
4064 5278 3.181329 TCCCACAGTGATGTTGTAGGAT 58.819 45.455 0.62 0.00 32.53 3.24
4065 5279 3.055167 TCCCACAGTGATGTTGTAGGATG 60.055 47.826 0.62 0.00 32.53 3.51
4066 5280 3.055167 CCCACAGTGATGTTGTAGGATGA 60.055 47.826 0.62 0.00 30.08 2.92
4067 5281 4.384537 CCCACAGTGATGTTGTAGGATGAT 60.385 45.833 0.62 0.00 30.08 2.45
4068 5282 5.163311 CCCACAGTGATGTTGTAGGATGATA 60.163 44.000 0.62 0.00 30.08 2.15
4069 5283 5.755375 CCACAGTGATGTTGTAGGATGATAC 59.245 44.000 0.62 0.00 0.00 2.24
4070 5284 5.460091 CACAGTGATGTTGTAGGATGATACG 59.540 44.000 0.00 0.00 0.00 3.06
4071 5285 5.127194 ACAGTGATGTTGTAGGATGATACGT 59.873 40.000 0.00 0.00 0.00 3.57
4072 5286 5.687730 CAGTGATGTTGTAGGATGATACGTC 59.312 44.000 0.00 0.00 0.00 4.34
4073 5287 5.359860 AGTGATGTTGTAGGATGATACGTCA 59.640 40.000 0.00 0.00 39.04 4.35
4074 5288 5.459107 GTGATGTTGTAGGATGATACGTCAC 59.541 44.000 0.00 0.00 43.94 3.67
4075 5289 4.380841 TGTTGTAGGATGATACGTCACC 57.619 45.455 0.00 0.00 37.14 4.02
4076 5290 3.181494 TGTTGTAGGATGATACGTCACCG 60.181 47.826 0.00 0.00 37.14 4.94
4077 5291 1.951602 TGTAGGATGATACGTCACCGG 59.048 52.381 0.00 0.00 37.14 5.28
4078 5292 0.956633 TAGGATGATACGTCACCGGC 59.043 55.000 0.00 0.00 37.14 6.13
4079 5293 1.660575 GGATGATACGTCACCGGCG 60.661 63.158 0.00 0.00 37.14 6.46
4080 5294 1.065273 GATGATACGTCACCGGCGT 59.935 57.895 6.01 6.02 45.11 5.68
4081 5295 0.308684 GATGATACGTCACCGGCGTA 59.691 55.000 13.93 13.93 46.63 4.42
4084 5298 4.223800 TACGTCACCGGCGTATCT 57.776 55.556 6.01 0.00 42.85 1.98
4085 5299 3.377933 TACGTCACCGGCGTATCTA 57.622 52.632 6.01 0.00 42.85 1.98
4086 5300 1.882912 TACGTCACCGGCGTATCTAT 58.117 50.000 6.01 0.00 42.85 1.98
4087 5301 1.882912 ACGTCACCGGCGTATCTATA 58.117 50.000 6.01 0.00 41.06 1.31
4088 5302 2.430465 ACGTCACCGGCGTATCTATAT 58.570 47.619 6.01 0.00 41.06 0.86
4089 5303 2.816087 ACGTCACCGGCGTATCTATATT 59.184 45.455 6.01 0.00 41.06 1.28
4090 5304 3.254166 ACGTCACCGGCGTATCTATATTT 59.746 43.478 6.01 0.00 41.06 1.40
4091 5305 4.232221 CGTCACCGGCGTATCTATATTTT 58.768 43.478 6.01 0.00 0.00 1.82
4092 5306 4.682860 CGTCACCGGCGTATCTATATTTTT 59.317 41.667 6.01 0.00 0.00 1.94
4116 5330 9.716531 TTTTTATTGTTTCATGCCAATATCACA 57.283 25.926 10.90 0.00 34.48 3.58
4117 5331 9.887629 TTTTATTGTTTCATGCCAATATCACAT 57.112 25.926 10.90 0.00 34.48 3.21
4119 5333 9.964303 TTATTGTTTCATGCCAATATCACATAC 57.036 29.630 10.90 0.00 34.48 2.39
4120 5334 7.643569 TTGTTTCATGCCAATATCACATACT 57.356 32.000 0.00 0.00 0.00 2.12
4121 5335 7.643569 TGTTTCATGCCAATATCACATACTT 57.356 32.000 0.00 0.00 0.00 2.24
4122 5336 8.065473 TGTTTCATGCCAATATCACATACTTT 57.935 30.769 0.00 0.00 0.00 2.66
4123 5337 8.530311 TGTTTCATGCCAATATCACATACTTTT 58.470 29.630 0.00 0.00 0.00 2.27
4124 5338 8.810427 GTTTCATGCCAATATCACATACTTTTG 58.190 33.333 0.00 0.00 0.00 2.44
4125 5339 7.041635 TCATGCCAATATCACATACTTTTGG 57.958 36.000 0.00 0.00 37.31 3.28
4129 5343 5.591099 CCAATATCACATACTTTTGGCACC 58.409 41.667 0.00 0.00 0.00 5.01
4130 5344 5.126869 CCAATATCACATACTTTTGGCACCA 59.873 40.000 0.00 0.00 0.00 4.17
4131 5345 6.183360 CCAATATCACATACTTTTGGCACCAT 60.183 38.462 0.00 0.00 0.00 3.55
4132 5346 7.267128 CAATATCACATACTTTTGGCACCATT 58.733 34.615 0.00 0.00 0.00 3.16
4133 5347 5.743636 ATCACATACTTTTGGCACCATTT 57.256 34.783 0.00 0.00 0.00 2.32
4134 5348 6.849085 ATCACATACTTTTGGCACCATTTA 57.151 33.333 0.00 0.00 0.00 1.40
4135 5349 6.849085 TCACATACTTTTGGCACCATTTAT 57.151 33.333 0.00 0.00 0.00 1.40
4136 5350 7.946381 TCACATACTTTTGGCACCATTTATA 57.054 32.000 0.00 0.00 0.00 0.98
4137 5351 8.532186 TCACATACTTTTGGCACCATTTATAT 57.468 30.769 0.00 0.00 0.00 0.86
4138 5352 8.976353 TCACATACTTTTGGCACCATTTATATT 58.024 29.630 0.00 0.00 0.00 1.28
4169 5383 8.662781 TTAGAACTAACATATTGATCCAGTGC 57.337 34.615 0.00 0.00 0.00 4.40
4170 5384 6.058183 AGAACTAACATATTGATCCAGTGCC 58.942 40.000 0.00 0.00 0.00 5.01
4171 5385 5.636903 ACTAACATATTGATCCAGTGCCT 57.363 39.130 0.00 0.00 0.00 4.75
4172 5386 6.747414 ACTAACATATTGATCCAGTGCCTA 57.253 37.500 0.00 0.00 0.00 3.93
4173 5387 6.763355 ACTAACATATTGATCCAGTGCCTAG 58.237 40.000 0.00 0.00 0.00 3.02
4174 5388 5.636903 AACATATTGATCCAGTGCCTAGT 57.363 39.130 0.00 0.00 0.00 2.57
4175 5389 5.636903 ACATATTGATCCAGTGCCTAGTT 57.363 39.130 0.00 0.00 0.00 2.24
4176 5390 5.615289 ACATATTGATCCAGTGCCTAGTTC 58.385 41.667 0.00 0.00 0.00 3.01
4177 5391 3.567478 ATTGATCCAGTGCCTAGTTCC 57.433 47.619 0.00 0.00 0.00 3.62
4178 5392 1.951209 TGATCCAGTGCCTAGTTCCA 58.049 50.000 0.00 0.00 0.00 3.53
4179 5393 1.833630 TGATCCAGTGCCTAGTTCCAG 59.166 52.381 0.00 0.00 0.00 3.86
4180 5394 1.834263 GATCCAGTGCCTAGTTCCAGT 59.166 52.381 0.00 0.00 0.00 4.00
4181 5395 1.729586 TCCAGTGCCTAGTTCCAGTT 58.270 50.000 0.00 0.00 0.00 3.16
4182 5396 1.623811 TCCAGTGCCTAGTTCCAGTTC 59.376 52.381 0.00 0.00 0.00 3.01
4183 5397 1.339151 CCAGTGCCTAGTTCCAGTTCC 60.339 57.143 0.00 0.00 0.00 3.62
4184 5398 1.625818 CAGTGCCTAGTTCCAGTTCCT 59.374 52.381 0.00 0.00 0.00 3.36
4185 5399 1.625818 AGTGCCTAGTTCCAGTTCCTG 59.374 52.381 0.00 0.00 0.00 3.86
4186 5400 1.348036 GTGCCTAGTTCCAGTTCCTGT 59.652 52.381 0.00 0.00 0.00 4.00
4187 5401 2.054799 TGCCTAGTTCCAGTTCCTGTT 58.945 47.619 0.00 0.00 0.00 3.16
4188 5402 2.441750 TGCCTAGTTCCAGTTCCTGTTT 59.558 45.455 0.00 0.00 0.00 2.83
4189 5403 3.117663 TGCCTAGTTCCAGTTCCTGTTTT 60.118 43.478 0.00 0.00 0.00 2.43
4190 5404 3.889538 GCCTAGTTCCAGTTCCTGTTTTT 59.110 43.478 0.00 0.00 0.00 1.94
4221 5435 6.727824 TTTTTGTTTCGCAGAAAATCCAAA 57.272 29.167 5.51 8.73 45.90 3.28
4222 5436 6.917217 TTTTGTTTCGCAGAAAATCCAAAT 57.083 29.167 13.47 0.00 45.90 2.32
4223 5437 6.523676 TTTGTTTCGCAGAAAATCCAAATC 57.476 33.333 5.51 0.00 45.90 2.17
4224 5438 5.193663 TGTTTCGCAGAAAATCCAAATCA 57.806 34.783 5.51 0.00 45.90 2.57
4225 5439 5.595885 TGTTTCGCAGAAAATCCAAATCAA 58.404 33.333 5.51 0.00 45.90 2.57
4226 5440 6.045318 TGTTTCGCAGAAAATCCAAATCAAA 58.955 32.000 5.51 0.00 45.90 2.69
4227 5441 6.705381 TGTTTCGCAGAAAATCCAAATCAAAT 59.295 30.769 5.51 0.00 45.90 2.32
4228 5442 6.709145 TTCGCAGAAAATCCAAATCAAATG 57.291 33.333 0.00 0.00 45.90 2.32
4229 5443 6.023357 TCGCAGAAAATCCAAATCAAATGA 57.977 33.333 0.00 0.00 0.00 2.57
4230 5444 6.453943 TCGCAGAAAATCCAAATCAAATGAA 58.546 32.000 0.00 0.00 0.00 2.57
4231 5445 6.587226 TCGCAGAAAATCCAAATCAAATGAAG 59.413 34.615 0.00 0.00 0.00 3.02
4232 5446 6.540205 GCAGAAAATCCAAATCAAATGAAGC 58.460 36.000 0.00 0.00 0.00 3.86
4233 5447 6.402875 GCAGAAAATCCAAATCAAATGAAGCC 60.403 38.462 0.00 0.00 0.00 4.35
4234 5448 6.093082 CAGAAAATCCAAATCAAATGAAGCCC 59.907 38.462 0.00 0.00 0.00 5.19
4235 5449 5.502089 AAATCCAAATCAAATGAAGCCCA 57.498 34.783 0.00 0.00 0.00 5.36
4236 5450 5.502089 AATCCAAATCAAATGAAGCCCAA 57.498 34.783 0.00 0.00 0.00 4.12
4237 5451 4.970860 TCCAAATCAAATGAAGCCCAAA 57.029 36.364 0.00 0.00 0.00 3.28
4238 5452 4.640364 TCCAAATCAAATGAAGCCCAAAC 58.360 39.130 0.00 0.00 0.00 2.93
4239 5453 3.432933 CCAAATCAAATGAAGCCCAAACG 59.567 43.478 0.00 0.00 0.00 3.60
4240 5454 3.317603 AATCAAATGAAGCCCAAACGG 57.682 42.857 0.00 0.00 0.00 4.44
4244 5458 2.757868 CAAATGAAGCCCAAACGGGATA 59.242 45.455 0.46 0.00 43.37 2.59
4245 5459 2.818751 ATGAAGCCCAAACGGGATAA 57.181 45.000 0.46 0.00 43.37 1.75
4246 5460 2.588464 TGAAGCCCAAACGGGATAAA 57.412 45.000 0.46 0.00 43.37 1.40
4247 5461 2.877866 TGAAGCCCAAACGGGATAAAA 58.122 42.857 0.46 0.00 43.37 1.52
4248 5462 3.436243 TGAAGCCCAAACGGGATAAAAT 58.564 40.909 0.46 0.00 43.37 1.82
4249 5463 4.601084 TGAAGCCCAAACGGGATAAAATA 58.399 39.130 0.46 0.00 43.37 1.40
4250 5464 5.205056 TGAAGCCCAAACGGGATAAAATAT 58.795 37.500 0.46 0.00 43.37 1.28
4251 5465 5.068460 TGAAGCCCAAACGGGATAAAATATG 59.932 40.000 0.46 0.00 43.37 1.78
4252 5466 5.205056 AAGCCCAAACGGGATAAAATATGA 58.795 37.500 0.46 0.00 43.37 2.15
4253 5467 5.068591 AAGCCCAAACGGGATAAAATATGAC 59.931 40.000 0.46 0.00 43.37 3.06
4254 5468 7.311201 AAGCCCAAACGGGATAAAATATGACA 61.311 38.462 0.46 0.00 43.37 3.58
4255 5469 9.030776 AAGCCCAAACGGGATAAAATATGACAG 62.031 40.741 0.46 0.00 43.37 3.51
4256 5470 6.935741 CCAAACGGGATAAAATATGACAGA 57.064 37.500 0.00 0.00 40.01 3.41
4257 5471 6.959361 CCAAACGGGATAAAATATGACAGAG 58.041 40.000 0.00 0.00 40.01 3.35
4258 5472 6.765989 CCAAACGGGATAAAATATGACAGAGA 59.234 38.462 0.00 0.00 40.01 3.10
4259 5473 7.445402 CCAAACGGGATAAAATATGACAGAGAT 59.555 37.037 0.00 0.00 40.01 2.75
4260 5474 8.840321 CAAACGGGATAAAATATGACAGAGATT 58.160 33.333 0.00 0.00 0.00 2.40
4261 5475 8.980481 AACGGGATAAAATATGACAGAGATTT 57.020 30.769 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.680352 GAGGAGGTGGAGGCGACA 60.680 66.667 0.00 0.00 0.00 4.35
50 52 1.749258 GGGAGGCGCGGAGAAAAAT 60.749 57.895 8.83 0.00 0.00 1.82
91 93 6.798482 TGCAGCATCTGTTAAAATTATCAGG 58.202 36.000 0.00 0.04 33.41 3.86
102 104 7.147932 TGGCTTTATTTTATGCAGCATCTGTTA 60.148 33.333 12.38 0.00 33.43 2.41
125 127 6.173191 TCAAGTTACTTTATTTACGCTGGC 57.827 37.500 0.00 0.00 0.00 4.85
163 165 5.533482 CCGTGGTTTTGGAAATTATCAACA 58.467 37.500 0.00 0.00 0.00 3.33
427 429 6.329496 CGTTGCAACAGGGACATAAATATTT 58.671 36.000 28.01 5.89 0.00 1.40
541 546 7.595819 AAGTTGGGTCATCTATTTTGAAACA 57.404 32.000 0.00 0.00 0.00 2.83
583 588 9.108284 CAGTTTCAAAATAAATGACCCAACTTT 57.892 29.630 0.00 0.00 28.10 2.66
584 589 8.482128 TCAGTTTCAAAATAAATGACCCAACTT 58.518 29.630 0.00 0.00 28.10 2.66
586 591 8.655651 TTCAGTTTCAAAATAAATGACCCAAC 57.344 30.769 0.00 0.00 0.00 3.77
587 592 8.700051 TCTTCAGTTTCAAAATAAATGACCCAA 58.300 29.630 0.00 0.00 0.00 4.12
589 594 9.196552 CTTCTTCAGTTTCAAAATAAATGACCC 57.803 33.333 0.00 0.00 0.00 4.46
590 595 9.750125 ACTTCTTCAGTTTCAAAATAAATGACC 57.250 29.630 0.00 0.00 27.32 4.02
602 684 7.386059 TGCACATATCTACTTCTTCAGTTTCA 58.614 34.615 0.00 0.00 36.88 2.69
604 686 8.798859 ATTGCACATATCTACTTCTTCAGTTT 57.201 30.769 0.00 0.00 36.88 2.66
608 690 9.453572 AAAAGATTGCACATATCTACTTCTTCA 57.546 29.630 0.00 0.00 32.21 3.02
611 693 9.035607 CGTAAAAGATTGCACATATCTACTTCT 57.964 33.333 0.00 0.00 32.21 2.85
613 695 8.942338 TCGTAAAAGATTGCACATATCTACTT 57.058 30.769 0.00 1.01 32.21 2.24
628 710 7.148474 ACGTTGACTTGCATATTCGTAAAAGAT 60.148 33.333 0.00 0.00 0.00 2.40
629 711 6.146510 ACGTTGACTTGCATATTCGTAAAAGA 59.853 34.615 0.00 0.00 0.00 2.52
636 718 3.242091 CCAGACGTTGACTTGCATATTCG 60.242 47.826 0.00 0.00 0.00 3.34
641 723 0.534877 TGCCAGACGTTGACTTGCAT 60.535 50.000 0.00 0.00 32.53 3.96
688 770 2.408704 GCTGTATCTATTAGCCGTTGCG 59.591 50.000 0.00 0.00 44.33 4.85
868 956 2.094597 CCTCCGAACGTGGTGTGTATAA 60.095 50.000 0.00 0.00 0.00 0.98
1050 1140 3.923864 ACGAAGTCTGGCACGGCA 61.924 61.111 0.00 0.00 29.74 5.69
1146 1236 1.602237 GAATCCCGGTGGCTCTTCA 59.398 57.895 0.00 0.00 0.00 3.02
1256 1346 0.666274 GACGTCAACGATGAGGCACA 60.666 55.000 11.55 0.00 43.57 4.57
1425 1515 1.146358 GCTGGACGCGTGGATAGTTC 61.146 60.000 20.70 0.00 0.00 3.01
1641 1733 2.034305 CGTAAGTACTCCCTCCAATCGG 59.966 54.545 0.00 0.00 0.00 4.18
1703 1819 4.324669 GGTACATCGAGCATATCATCAACG 59.675 45.833 0.00 0.00 0.00 4.10
1746 1862 4.249638 AGGATCTAGGCATCTAGCTAGG 57.750 50.000 20.58 6.77 44.79 3.02
1943 2060 4.244066 TGCCAATTTATGTGATTGTGTGC 58.756 39.130 0.00 0.00 33.65 4.57
1944 2061 6.199531 GCTATGCCAATTTATGTGATTGTGTG 59.800 38.462 0.00 0.00 33.65 3.82
1947 2064 6.720112 AGCTATGCCAATTTATGTGATTGT 57.280 33.333 0.00 0.00 33.65 2.71
1948 2065 7.204604 TCAAGCTATGCCAATTTATGTGATTG 58.795 34.615 0.00 0.00 34.93 2.67
1951 2068 6.772360 TTCAAGCTATGCCAATTTATGTGA 57.228 33.333 0.00 0.00 0.00 3.58
1952 2069 8.428186 AAATTCAAGCTATGCCAATTTATGTG 57.572 30.769 0.00 0.00 0.00 3.21
1954 2071 9.754382 ACTAAATTCAAGCTATGCCAATTTATG 57.246 29.630 0.00 1.03 31.22 1.90
1980 2600 5.051816 ACGTTCCTCAAAAATTCAGACGTA 58.948 37.500 0.00 0.00 39.13 3.57
1989 2609 1.600023 TGCCGACGTTCCTCAAAAAT 58.400 45.000 0.00 0.00 0.00 1.82
1992 2612 1.600023 AAATGCCGACGTTCCTCAAA 58.400 45.000 0.00 0.00 0.00 2.69
1993 2613 1.600023 AAAATGCCGACGTTCCTCAA 58.400 45.000 0.00 0.00 0.00 3.02
1994 2614 2.459060 TAAAATGCCGACGTTCCTCA 57.541 45.000 0.00 0.00 0.00 3.86
1995 2615 3.372822 TCAATAAAATGCCGACGTTCCTC 59.627 43.478 0.00 0.00 0.00 3.71
1996 2616 3.340034 TCAATAAAATGCCGACGTTCCT 58.660 40.909 0.00 0.00 0.00 3.36
1997 2617 3.750639 TCAATAAAATGCCGACGTTCC 57.249 42.857 0.00 0.00 0.00 3.62
1998 2618 4.904116 TGATCAATAAAATGCCGACGTTC 58.096 39.130 0.00 0.00 0.00 3.95
1999 2619 4.955925 TGATCAATAAAATGCCGACGTT 57.044 36.364 0.00 0.00 0.00 3.99
2000 2620 4.394920 ACTTGATCAATAAAATGCCGACGT 59.605 37.500 8.96 0.00 0.00 4.34
2001 2621 4.908736 ACTTGATCAATAAAATGCCGACG 58.091 39.130 8.96 0.00 0.00 5.12
2002 2622 9.944663 TTATTACTTGATCAATAAAATGCCGAC 57.055 29.630 8.96 0.00 0.00 4.79
2003 2623 9.944663 GTTATTACTTGATCAATAAAATGCCGA 57.055 29.630 8.96 0.00 30.56 5.54
2004 2624 9.729023 TGTTATTACTTGATCAATAAAATGCCG 57.271 29.630 8.96 0.00 30.56 5.69
2036 2658 2.827322 TGAAATGCCCCAAATCAGACTG 59.173 45.455 0.00 0.00 0.00 3.51
2073 3013 1.476007 GGCACAGACAGACAGGGAGT 61.476 60.000 0.00 0.00 0.00 3.85
2074 3014 1.190833 AGGCACAGACAGACAGGGAG 61.191 60.000 0.00 0.00 0.00 4.30
2075 3015 1.152247 AGGCACAGACAGACAGGGA 60.152 57.895 0.00 0.00 0.00 4.20
2076 3016 1.294780 GAGGCACAGACAGACAGGG 59.705 63.158 0.00 0.00 0.00 4.45
2077 3017 1.190833 AGGAGGCACAGACAGACAGG 61.191 60.000 0.00 0.00 0.00 4.00
2078 3018 0.246086 GAGGAGGCACAGACAGACAG 59.754 60.000 0.00 0.00 0.00 3.51
2079 3019 0.178950 AGAGGAGGCACAGACAGACA 60.179 55.000 0.00 0.00 0.00 3.41
2080 3020 1.748493 CTAGAGGAGGCACAGACAGAC 59.252 57.143 0.00 0.00 0.00 3.51
2081 3021 1.356059 ACTAGAGGAGGCACAGACAGA 59.644 52.381 0.00 0.00 0.00 3.41
2082 3022 1.846007 ACTAGAGGAGGCACAGACAG 58.154 55.000 0.00 0.00 0.00 3.51
2083 3023 2.300152 CAAACTAGAGGAGGCACAGACA 59.700 50.000 0.00 0.00 0.00 3.41
2084 3024 2.354203 CCAAACTAGAGGAGGCACAGAC 60.354 54.545 0.00 0.00 0.00 3.51
2085 3025 1.902508 CCAAACTAGAGGAGGCACAGA 59.097 52.381 0.00 0.00 0.00 3.41
2086 3026 1.677217 GCCAAACTAGAGGAGGCACAG 60.677 57.143 12.87 0.00 44.59 3.66
2087 3027 0.324943 GCCAAACTAGAGGAGGCACA 59.675 55.000 12.87 0.00 44.59 4.57
2088 3028 0.393132 GGCCAAACTAGAGGAGGCAC 60.393 60.000 17.31 7.38 46.96 5.01
2089 3029 1.562672 GGGCCAAACTAGAGGAGGCA 61.563 60.000 4.39 0.00 46.96 4.75
2090 3030 1.224870 GGGCCAAACTAGAGGAGGC 59.775 63.158 4.39 4.21 44.48 4.70
2091 3031 0.543749 CAGGGCCAAACTAGAGGAGG 59.456 60.000 6.18 0.00 0.00 4.30
2092 3032 0.107459 GCAGGGCCAAACTAGAGGAG 60.107 60.000 6.18 0.00 0.00 3.69
2093 3033 0.547712 AGCAGGGCCAAACTAGAGGA 60.548 55.000 6.18 0.00 0.00 3.71
2094 3034 0.393537 CAGCAGGGCCAAACTAGAGG 60.394 60.000 6.18 0.00 0.00 3.69
2095 3035 0.615331 TCAGCAGGGCCAAACTAGAG 59.385 55.000 6.18 0.00 0.00 2.43
2096 3036 1.065199 CATCAGCAGGGCCAAACTAGA 60.065 52.381 6.18 0.00 0.00 2.43
2097 3037 1.065199 TCATCAGCAGGGCCAAACTAG 60.065 52.381 6.18 0.00 0.00 2.57
2098 3038 0.991146 TCATCAGCAGGGCCAAACTA 59.009 50.000 6.18 0.00 0.00 2.24
2099 3039 0.323178 CTCATCAGCAGGGCCAAACT 60.323 55.000 6.18 0.00 0.00 2.66
2100 3040 0.610232 ACTCATCAGCAGGGCCAAAC 60.610 55.000 6.18 0.00 0.00 2.93
2101 3041 0.991146 TACTCATCAGCAGGGCCAAA 59.009 50.000 6.18 0.00 0.00 3.28
2102 3042 0.253044 GTACTCATCAGCAGGGCCAA 59.747 55.000 6.18 0.00 0.00 4.52
2103 3043 0.909133 TGTACTCATCAGCAGGGCCA 60.909 55.000 6.18 0.00 0.00 5.36
2104 3044 0.253044 TTGTACTCATCAGCAGGGCC 59.747 55.000 0.00 0.00 0.00 5.80
2105 3045 1.339055 TGTTGTACTCATCAGCAGGGC 60.339 52.381 0.00 0.00 0.00 5.19
2106 3046 2.768253 TGTTGTACTCATCAGCAGGG 57.232 50.000 0.00 0.00 0.00 4.45
2107 3047 4.067896 ACTTTGTTGTACTCATCAGCAGG 58.932 43.478 0.00 0.00 0.00 4.85
2108 3048 5.237127 TCAACTTTGTTGTACTCATCAGCAG 59.763 40.000 9.78 0.00 0.00 4.24
2109 3049 5.007626 GTCAACTTTGTTGTACTCATCAGCA 59.992 40.000 9.78 0.00 0.00 4.41
2110 3050 5.237344 AGTCAACTTTGTTGTACTCATCAGC 59.763 40.000 9.78 0.00 0.00 4.26
2111 3051 6.851222 AGTCAACTTTGTTGTACTCATCAG 57.149 37.500 9.78 0.00 0.00 2.90
2112 3052 6.821160 TGAAGTCAACTTTGTTGTACTCATCA 59.179 34.615 9.78 9.94 36.11 3.07
2113 3053 7.246674 TGAAGTCAACTTTGTTGTACTCATC 57.753 36.000 9.78 8.18 36.11 2.92
2114 3054 6.260936 CCTGAAGTCAACTTTGTTGTACTCAT 59.739 38.462 9.78 0.81 36.11 2.90
2115 3055 5.584649 CCTGAAGTCAACTTTGTTGTACTCA 59.415 40.000 9.78 9.36 36.11 3.41
2116 3056 5.585047 ACCTGAAGTCAACTTTGTTGTACTC 59.415 40.000 9.78 6.10 36.11 2.59
2117 3057 5.497474 ACCTGAAGTCAACTTTGTTGTACT 58.503 37.500 9.78 9.08 36.11 2.73
2118 3058 5.813080 ACCTGAAGTCAACTTTGTTGTAC 57.187 39.130 9.78 7.35 36.11 2.90
2119 3059 7.066525 CCTTAACCTGAAGTCAACTTTGTTGTA 59.933 37.037 9.78 0.00 36.11 2.41
2120 3060 6.127730 CCTTAACCTGAAGTCAACTTTGTTGT 60.128 38.462 9.78 0.00 36.11 3.32
2121 3061 6.265577 CCTTAACCTGAAGTCAACTTTGTTG 58.734 40.000 4.25 4.25 36.11 3.33
2136 3076 3.118261 TGATAGCTCAAGGCCTTAACCTG 60.118 47.826 20.00 6.32 39.93 4.00
2139 3079 5.008118 GTGATTGATAGCTCAAGGCCTTAAC 59.992 44.000 20.00 10.61 44.32 2.01
2142 3082 3.549794 GTGATTGATAGCTCAAGGCCTT 58.450 45.455 13.78 13.78 44.32 4.35
2170 3110 1.760029 TGCTATCTGATAACGTGGGCA 59.240 47.619 0.00 1.40 0.00 5.36
2174 3114 2.469147 CGTGCTGCTATCTGATAACGTG 59.531 50.000 0.00 0.69 0.00 4.49
2210 3157 9.857957 GATGAAATAAAACGGGGTAAACAATTA 57.142 29.630 0.00 0.00 0.00 1.40
2219 3166 5.303333 ACAAACAGATGAAATAAAACGGGGT 59.697 36.000 0.00 0.00 0.00 4.95
2223 3170 9.232082 TGAAGAACAAACAGATGAAATAAAACG 57.768 29.630 0.00 0.00 0.00 3.60
2236 3183 7.095695 TCCCTTTTTAGTGAAGAACAAACAG 57.904 36.000 0.00 0.00 0.00 3.16
2257 3204 4.984205 TGCGTACCGAATTAAAATTTCCC 58.016 39.130 0.00 0.00 0.00 3.97
2282 3230 1.676746 CTTCCGTCGAGATGGGACTA 58.323 55.000 11.10 0.00 38.05 2.59
2291 3239 0.596577 TGTTGACTCCTTCCGTCGAG 59.403 55.000 0.00 0.00 34.17 4.04
2304 3252 3.240631 GCTTTTGCTTCGTCTTTGTTGAC 59.759 43.478 0.00 0.00 43.35 3.18
2360 3308 0.040067 CAAGTTGCAAGTCTTCGGGC 60.040 55.000 7.36 0.00 0.00 6.13
2417 3365 2.166821 ATCTTGATCTCTGCGATGCC 57.833 50.000 0.00 0.00 30.84 4.40
2475 3423 3.706373 GACCAGGAGGCAGCGGAA 61.706 66.667 0.00 0.00 39.06 4.30
2783 3731 2.034685 GCTCTTCAAAACCCACAGGAAC 59.965 50.000 0.00 0.00 36.73 3.62
2828 3776 3.006728 TCCAGGTAACCGCTGGGG 61.007 66.667 9.49 9.49 43.62 4.96
2860 3808 1.599047 CAGGAGACGACCTTGCCAT 59.401 57.895 0.00 0.00 38.32 4.40
2951 3899 1.728069 GTGCTGTATCGCCTCGAGA 59.272 57.895 15.71 0.00 39.91 4.04
3032 3980 5.052693 TGATCCCTATTTCCCACATCTTG 57.947 43.478 0.00 0.00 0.00 3.02
3098 4046 4.141846 CCATCTTCTCCTTCCAAGATTCGA 60.142 45.833 0.00 0.00 37.27 3.71
3099 4047 4.125703 CCATCTTCTCCTTCCAAGATTCG 58.874 47.826 0.00 0.00 37.27 3.34
3268 4216 6.837471 AACATTAGGTCGAACTCTTCTAGT 57.163 37.500 6.06 0.00 41.49 2.57
3290 4238 7.862372 GCATTCACTGAGACAACAGAAATAAAA 59.138 33.333 0.00 0.00 40.63 1.52
3343 4291 4.524328 AGCATTTCGTTCCCTTGAGAAATT 59.476 37.500 0.20 0.00 40.17 1.82
3394 4342 5.753438 GGATACGATGTTACTGATCAAAGCA 59.247 40.000 0.00 0.00 0.00 3.91
3402 4350 7.958088 TGGAAATATGGATACGATGTTACTGA 58.042 34.615 0.00 0.00 42.51 3.41
3403 4351 8.601845 TTGGAAATATGGATACGATGTTACTG 57.398 34.615 0.00 0.00 42.51 2.74
3404 4352 9.436957 GATTGGAAATATGGATACGATGTTACT 57.563 33.333 0.00 0.00 42.51 2.24
3425 4373 2.608752 GCTCACCTTGCAAACAGATTGG 60.609 50.000 0.00 0.00 39.54 3.16
3526 4474 2.363925 ACTACCCCACTCTCCCGC 60.364 66.667 0.00 0.00 0.00 6.13
3527 4475 1.000019 TCACTACCCCACTCTCCCG 60.000 63.158 0.00 0.00 0.00 5.14
3531 4479 2.109480 TGTGTACTCACTACCCCACTCT 59.891 50.000 0.00 0.00 44.14 3.24
3554 4502 7.288810 ACATTTATGTGTCAACCTTGTCAAT 57.711 32.000 0.00 0.00 40.03 2.57
3555 4503 6.707440 ACATTTATGTGTCAACCTTGTCAA 57.293 33.333 0.00 0.00 40.03 3.18
3556 4504 6.312399 GACATTTATGTGTCAACCTTGTCA 57.688 37.500 0.00 0.00 46.04 3.58
3625 4833 7.446931 TCGAGCTCATTATCTCTCATTTAGACT 59.553 37.037 15.40 0.00 0.00 3.24
3634 4842 3.004210 TGCAGTCGAGCTCATTATCTCTC 59.996 47.826 15.40 0.05 34.99 3.20
3655 4863 5.277393 GCACATGATCTTCATTCTACTGCTG 60.277 44.000 0.00 0.00 34.28 4.41
3660 4868 6.279123 TGAGAGCACATGATCTTCATTCTAC 58.721 40.000 0.00 0.00 41.40 2.59
3789 4997 0.262580 ATCACCCCCAACATCCATGG 59.737 55.000 4.97 4.97 37.71 3.66
3802 5010 5.542635 TGTATGGGTATTACTCTCATCACCC 59.457 44.000 0.50 0.50 44.91 4.61
3837 5045 1.374758 CCAGCCTCAAGTCCGACAC 60.375 63.158 0.40 0.00 0.00 3.67
3840 5048 0.324738 ATCTCCAGCCTCAAGTCCGA 60.325 55.000 0.00 0.00 0.00 4.55
3847 5055 1.273495 ACCTCTTCATCTCCAGCCTCA 60.273 52.381 0.00 0.00 0.00 3.86
3853 5061 2.182827 CCTCACACCTCTTCATCTCCA 58.817 52.381 0.00 0.00 0.00 3.86
3893 5102 3.282021 CCAACTAGGAATGACCATGGTG 58.718 50.000 25.52 7.65 41.22 4.17
3901 5110 4.341235 CGTATCTCCACCAACTAGGAATGA 59.659 45.833 0.00 0.00 41.22 2.57
3909 5118 1.623811 ACAAGCGTATCTCCACCAACT 59.376 47.619 0.00 0.00 0.00 3.16
3938 5147 1.673033 CCACCTTAACACTCGAGCCAG 60.673 57.143 13.61 5.40 0.00 4.85
3943 5152 1.870580 CGCAACCACCTTAACACTCGA 60.871 52.381 0.00 0.00 0.00 4.04
3956 5165 0.326595 TGGCTTCTATTCCGCAACCA 59.673 50.000 0.00 0.00 0.00 3.67
3982 5191 7.439955 GGTACACGAATATCCAACATGTCAATA 59.560 37.037 0.00 0.00 0.00 1.90
3984 5193 5.583061 GGTACACGAATATCCAACATGTCAA 59.417 40.000 0.00 0.00 0.00 3.18
3985 5194 5.113383 GGTACACGAATATCCAACATGTCA 58.887 41.667 0.00 0.00 0.00 3.58
3986 5195 4.510340 GGGTACACGAATATCCAACATGTC 59.490 45.833 0.00 0.00 0.00 3.06
3987 5196 4.448210 GGGTACACGAATATCCAACATGT 58.552 43.478 0.00 0.00 0.00 3.21
3988 5197 3.813166 GGGGTACACGAATATCCAACATG 59.187 47.826 0.00 0.00 0.00 3.21
4012 5224 2.424601 AGACACAAATGCGGGAATCATG 59.575 45.455 0.00 0.00 0.00 3.07
4048 5260 5.592054 ACGTATCATCCTACAACATCACTG 58.408 41.667 0.00 0.00 0.00 3.66
4054 5268 4.380841 GGTGACGTATCATCCTACAACA 57.619 45.455 0.00 0.00 37.14 3.33
4090 5304 9.716531 TGTGATATTGGCATGAAACAATAAAAA 57.283 25.926 16.57 7.40 41.35 1.94
4091 5305 9.887629 ATGTGATATTGGCATGAAACAATAAAA 57.112 25.926 16.57 9.05 41.35 1.52
4093 5307 9.964303 GTATGTGATATTGGCATGAAACAATAA 57.036 29.630 16.57 6.15 41.35 1.40
4094 5308 9.353431 AGTATGTGATATTGGCATGAAACAATA 57.647 29.630 15.57 15.57 41.98 1.90
4095 5309 8.241497 AGTATGTGATATTGGCATGAAACAAT 57.759 30.769 13.02 13.02 40.21 2.71
4096 5310 7.643569 AGTATGTGATATTGGCATGAAACAA 57.356 32.000 0.00 0.00 0.00 2.83
4097 5311 7.643569 AAGTATGTGATATTGGCATGAAACA 57.356 32.000 0.00 0.00 0.00 2.83
4098 5312 8.810427 CAAAAGTATGTGATATTGGCATGAAAC 58.190 33.333 0.00 0.00 0.00 2.78
4099 5313 7.980662 CCAAAAGTATGTGATATTGGCATGAAA 59.019 33.333 0.00 0.00 0.00 2.69
4100 5314 7.490840 CCAAAAGTATGTGATATTGGCATGAA 58.509 34.615 0.00 0.00 0.00 2.57
4101 5315 7.041635 CCAAAAGTATGTGATATTGGCATGA 57.958 36.000 0.00 0.00 0.00 3.07
4106 5320 5.126869 TGGTGCCAAAAGTATGTGATATTGG 59.873 40.000 0.00 0.00 0.00 3.16
4107 5321 6.206395 TGGTGCCAAAAGTATGTGATATTG 57.794 37.500 0.00 0.00 0.00 1.90
4108 5322 7.422465 AATGGTGCCAAAAGTATGTGATATT 57.578 32.000 0.00 0.00 0.00 1.28
4109 5323 7.422465 AAATGGTGCCAAAAGTATGTGATAT 57.578 32.000 0.00 0.00 0.00 1.63
4110 5324 6.849085 AAATGGTGCCAAAAGTATGTGATA 57.151 33.333 0.00 0.00 0.00 2.15
4111 5325 5.743636 AAATGGTGCCAAAAGTATGTGAT 57.256 34.783 0.00 0.00 0.00 3.06
4112 5326 6.849085 ATAAATGGTGCCAAAAGTATGTGA 57.151 33.333 0.00 0.00 0.00 3.58
4143 5357 9.109393 GCACTGGATCAATATGTTAGTTCTAAA 57.891 33.333 0.00 0.00 0.00 1.85
4144 5358 7.715249 GGCACTGGATCAATATGTTAGTTCTAA 59.285 37.037 0.00 0.00 0.00 2.10
4145 5359 7.071196 AGGCACTGGATCAATATGTTAGTTCTA 59.929 37.037 0.00 0.00 37.18 2.10
4146 5360 6.058183 GGCACTGGATCAATATGTTAGTTCT 58.942 40.000 0.00 0.00 0.00 3.01
4147 5361 6.058183 AGGCACTGGATCAATATGTTAGTTC 58.942 40.000 0.00 0.00 37.18 3.01
4148 5362 6.006275 AGGCACTGGATCAATATGTTAGTT 57.994 37.500 0.00 0.00 37.18 2.24
4149 5363 5.636903 AGGCACTGGATCAATATGTTAGT 57.363 39.130 0.00 0.00 37.18 2.24
4150 5364 6.763355 ACTAGGCACTGGATCAATATGTTAG 58.237 40.000 0.00 0.00 40.33 2.34
4151 5365 6.747414 ACTAGGCACTGGATCAATATGTTA 57.253 37.500 0.00 0.00 40.33 2.41
4152 5366 5.636903 ACTAGGCACTGGATCAATATGTT 57.363 39.130 0.00 0.00 40.33 2.71
4153 5367 5.455326 GGAACTAGGCACTGGATCAATATGT 60.455 44.000 0.00 0.00 40.30 2.29
4154 5368 4.999950 GGAACTAGGCACTGGATCAATATG 59.000 45.833 0.00 0.00 40.30 1.78
4155 5369 4.660303 TGGAACTAGGCACTGGATCAATAT 59.340 41.667 0.00 0.00 40.30 1.28
4156 5370 4.037222 TGGAACTAGGCACTGGATCAATA 58.963 43.478 0.00 0.00 40.30 1.90
4157 5371 2.846206 TGGAACTAGGCACTGGATCAAT 59.154 45.455 0.00 0.00 40.30 2.57
4158 5372 2.237143 CTGGAACTAGGCACTGGATCAA 59.763 50.000 0.00 0.00 40.30 2.57
4159 5373 1.833630 CTGGAACTAGGCACTGGATCA 59.166 52.381 0.00 0.00 40.30 2.92
4160 5374 1.834263 ACTGGAACTAGGCACTGGATC 59.166 52.381 0.00 0.00 40.33 3.36
4161 5375 1.958288 ACTGGAACTAGGCACTGGAT 58.042 50.000 0.00 0.00 40.33 3.41
4162 5376 1.623811 GAACTGGAACTAGGCACTGGA 59.376 52.381 0.00 0.00 40.33 3.86
4163 5377 1.339151 GGAACTGGAACTAGGCACTGG 60.339 57.143 0.00 0.00 44.86 4.00
4164 5378 1.625818 AGGAACTGGAACTAGGCACTG 59.374 52.381 0.00 0.00 36.47 3.66
4165 5379 2.031495 AGGAACTGGAACTAGGCACT 57.969 50.000 0.00 0.00 39.96 4.40
4198 5412 6.727824 TTTGGATTTTCTGCGAAACAAAAA 57.272 29.167 11.79 0.00 0.00 1.94
4199 5413 6.536582 TGATTTGGATTTTCTGCGAAACAAAA 59.463 30.769 15.17 8.30 0.00 2.44
4200 5414 6.045318 TGATTTGGATTTTCTGCGAAACAAA 58.955 32.000 14.32 14.32 0.00 2.83
4201 5415 5.595885 TGATTTGGATTTTCTGCGAAACAA 58.404 33.333 3.71 3.49 0.00 2.83
4202 5416 5.193663 TGATTTGGATTTTCTGCGAAACA 57.806 34.783 3.71 0.00 0.00 2.83
4203 5417 6.523676 TTTGATTTGGATTTTCTGCGAAAC 57.476 33.333 3.71 0.00 0.00 2.78
4204 5418 6.927936 TCATTTGATTTGGATTTTCTGCGAAA 59.072 30.769 0.00 0.55 0.00 3.46
4205 5419 6.453943 TCATTTGATTTGGATTTTCTGCGAA 58.546 32.000 0.00 0.00 0.00 4.70
4206 5420 6.023357 TCATTTGATTTGGATTTTCTGCGA 57.977 33.333 0.00 0.00 0.00 5.10
4207 5421 6.671402 GCTTCATTTGATTTGGATTTTCTGCG 60.671 38.462 0.00 0.00 0.00 5.18
4208 5422 6.402875 GGCTTCATTTGATTTGGATTTTCTGC 60.403 38.462 0.00 0.00 0.00 4.26
4209 5423 6.093082 GGGCTTCATTTGATTTGGATTTTCTG 59.907 38.462 0.00 0.00 0.00 3.02
4210 5424 6.175471 GGGCTTCATTTGATTTGGATTTTCT 58.825 36.000 0.00 0.00 0.00 2.52
4211 5425 5.939296 TGGGCTTCATTTGATTTGGATTTTC 59.061 36.000 0.00 0.00 0.00 2.29
4212 5426 5.878627 TGGGCTTCATTTGATTTGGATTTT 58.121 33.333 0.00 0.00 0.00 1.82
4213 5427 5.502089 TGGGCTTCATTTGATTTGGATTT 57.498 34.783 0.00 0.00 0.00 2.17
4214 5428 5.502089 TTGGGCTTCATTTGATTTGGATT 57.498 34.783 0.00 0.00 0.00 3.01
4215 5429 5.247862 GTTTGGGCTTCATTTGATTTGGAT 58.752 37.500 0.00 0.00 0.00 3.41
4216 5430 4.640364 GTTTGGGCTTCATTTGATTTGGA 58.360 39.130 0.00 0.00 0.00 3.53
4217 5431 3.432933 CGTTTGGGCTTCATTTGATTTGG 59.567 43.478 0.00 0.00 0.00 3.28
4218 5432 3.432933 CCGTTTGGGCTTCATTTGATTTG 59.567 43.478 0.00 0.00 0.00 2.32
4219 5433 3.663025 CCGTTTGGGCTTCATTTGATTT 58.337 40.909 0.00 0.00 0.00 2.17
4220 5434 3.317603 CCGTTTGGGCTTCATTTGATT 57.682 42.857 0.00 0.00 0.00 2.57
4233 5447 6.765989 TCTCTGTCATATTTTATCCCGTTTGG 59.234 38.462 0.00 0.00 0.00 3.28
4234 5448 7.786178 TCTCTGTCATATTTTATCCCGTTTG 57.214 36.000 0.00 0.00 0.00 2.93
4235 5449 8.980481 AATCTCTGTCATATTTTATCCCGTTT 57.020 30.769 0.00 0.00 0.00 3.60
4236 5450 8.980481 AAATCTCTGTCATATTTTATCCCGTT 57.020 30.769 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.