Multiple sequence alignment - TraesCS6B01G258900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G258900 chr6B 100.000 2885 0 0 1 2885 466966027 466968911 0.000000e+00 5328.0
1 TraesCS6B01G258900 chr6B 92.739 303 12 3 2442 2734 466982293 466982595 2.050000e-116 429.0
2 TraesCS6B01G258900 chr6B 94.253 87 5 0 414 500 693329457 693329371 1.800000e-27 134.0
3 TraesCS6B01G258900 chr6D 92.919 1850 81 11 506 2323 301805830 301803999 0.000000e+00 2645.0
4 TraesCS6B01G258900 chr6D 90.724 442 19 15 1 431 301806255 301805825 1.160000e-158 569.0
5 TraesCS6B01G258900 chr6D 92.045 88 6 1 415 501 462439582 462439495 3.900000e-24 122.0
6 TraesCS6B01G258900 chr6D 90.909 77 4 3 2330 2404 301786974 301786899 1.830000e-17 100.0
7 TraesCS6B01G258900 chr6A 93.760 1250 53 8 506 1739 415097643 415098883 0.000000e+00 1853.0
8 TraesCS6B01G258900 chr6A 85.077 717 50 21 1747 2422 415098930 415099630 0.000000e+00 678.0
9 TraesCS6B01G258900 chr6A 92.523 428 20 8 1 416 415097207 415097634 1.140000e-168 603.0
10 TraesCS6B01G258900 chr6A 86.792 106 12 2 398 503 66301436 66301539 1.820000e-22 117.0
11 TraesCS6B01G258900 chr6A 81.250 128 6 2 2098 2225 607391752 607391861 1.420000e-13 87.9
12 TraesCS6B01G258900 chr7A 90.929 452 30 2 2445 2885 536703634 536704085 5.320000e-167 597.0
13 TraesCS6B01G258900 chr7A 90.411 292 18 1 2442 2723 536708645 536708936 2.710000e-100 375.0
14 TraesCS6B01G258900 chr7A 93.182 88 6 0 412 499 689113967 689113880 2.330000e-26 130.0
15 TraesCS6B01G258900 chr4D 92.166 217 14 1 2009 2225 307813148 307813361 1.300000e-78 303.0
16 TraesCS6B01G258900 chr4D 92.941 85 6 0 415 499 82732573 82732657 1.090000e-24 124.0
17 TraesCS6B01G258900 chr2A 89.634 164 14 1 2060 2223 12176265 12176425 3.770000e-49 206.0
18 TraesCS6B01G258900 chr2A 75.309 243 31 19 1399 1619 623152667 623152902 3.960000e-14 89.8
19 TraesCS6B01G258900 chr5A 88.554 166 16 2 2060 2225 293863150 293863312 6.310000e-47 198.0
20 TraesCS6B01G258900 chr5A 94.186 86 5 0 414 499 245964720 245964805 6.490000e-27 132.0
21 TraesCS6B01G258900 chr5A 88.333 60 6 1 2730 2789 440958400 440958458 1.430000e-08 71.3
22 TraesCS6B01G258900 chr3B 87.425 167 14 6 2060 2225 450356863 450356703 4.910000e-43 185.0
23 TraesCS6B01G258900 chr5B 96.512 86 3 0 414 499 176234989 176235074 3.000000e-30 143.0
24 TraesCS6B01G258900 chr1B 96.512 86 3 0 414 499 603937352 603937267 3.000000e-30 143.0
25 TraesCS6B01G258900 chr5D 94.186 86 5 0 414 499 159649265 159649180 6.490000e-27 132.0
26 TraesCS6B01G258900 chr2D 75.934 241 36 15 1393 1619 480574174 480574406 1.410000e-18 104.0
27 TraesCS6B01G258900 chr2B 84.375 96 9 4 1524 1619 563679441 563679530 3.960000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G258900 chr6B 466966027 466968911 2884 False 5328.000000 5328 100.000000 1 2885 1 chr6B.!!$F1 2884
1 TraesCS6B01G258900 chr6D 301803999 301806255 2256 True 1607.000000 2645 91.821500 1 2323 2 chr6D.!!$R3 2322
2 TraesCS6B01G258900 chr6A 415097207 415099630 2423 False 1044.666667 1853 90.453333 1 2422 3 chr6A.!!$F3 2421

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
51 52 0.386476 GACACGTACGCCCATATCCA 59.614 55.0 16.72 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1950 2055 0.036952 CAGACGCCCACTGATCAACT 60.037 55.0 0.0 0.0 37.54 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 0.386476 GACACGTACGCCCATATCCA 59.614 55.000 16.72 0.00 0.00 3.41
78 79 2.439701 TGGGTCTACGGCTCTCGG 60.440 66.667 0.00 0.00 44.45 4.63
88 89 4.010414 GCTCTCGGCGCATGCATC 62.010 66.667 19.57 8.49 45.35 3.91
89 90 3.344215 CTCTCGGCGCATGCATCC 61.344 66.667 19.57 16.53 45.35 3.51
209 228 2.125512 ACGCTCTGATTCGTGGGC 60.126 61.111 4.66 0.00 37.55 5.36
416 436 3.545078 CAGCGGATGTTACTAACACGTAC 59.455 47.826 3.67 0.00 45.50 3.67
417 437 3.441572 AGCGGATGTTACTAACACGTACT 59.558 43.478 3.67 0.00 45.50 2.73
419 439 4.346129 CGGATGTTACTAACACGTACTCC 58.654 47.826 3.67 6.20 45.50 3.85
420 440 4.676546 GGATGTTACTAACACGTACTCCC 58.323 47.826 3.67 0.00 45.50 4.30
421 441 4.400567 GGATGTTACTAACACGTACTCCCT 59.599 45.833 3.67 0.00 45.50 4.20
422 442 5.449725 GGATGTTACTAACACGTACTCCCTC 60.450 48.000 3.67 0.00 45.50 4.30
423 443 3.758554 TGTTACTAACACGTACTCCCTCC 59.241 47.826 0.00 0.00 36.25 4.30
424 444 1.457346 ACTAACACGTACTCCCTCCG 58.543 55.000 0.00 0.00 0.00 4.63
425 445 1.271597 ACTAACACGTACTCCCTCCGT 60.272 52.381 0.00 0.00 34.71 4.69
426 446 2.027192 ACTAACACGTACTCCCTCCGTA 60.027 50.000 0.00 0.00 32.81 4.02
427 447 1.909700 AACACGTACTCCCTCCGTAA 58.090 50.000 0.00 0.00 32.81 3.18
428 448 1.909700 ACACGTACTCCCTCCGTAAA 58.090 50.000 0.00 0.00 32.81 2.01
429 449 1.815003 ACACGTACTCCCTCCGTAAAG 59.185 52.381 0.00 0.00 32.81 1.85
430 450 2.086869 CACGTACTCCCTCCGTAAAGA 58.913 52.381 0.00 0.00 32.81 2.52
431 451 2.489329 CACGTACTCCCTCCGTAAAGAA 59.511 50.000 0.00 0.00 32.81 2.52
432 452 3.057315 CACGTACTCCCTCCGTAAAGAAA 60.057 47.826 0.00 0.00 32.81 2.52
433 453 3.766051 ACGTACTCCCTCCGTAAAGAAAT 59.234 43.478 0.00 0.00 32.22 2.17
434 454 4.949856 ACGTACTCCCTCCGTAAAGAAATA 59.050 41.667 0.00 0.00 32.22 1.40
435 455 5.595952 ACGTACTCCCTCCGTAAAGAAATAT 59.404 40.000 0.00 0.00 32.22 1.28
436 456 6.772716 ACGTACTCCCTCCGTAAAGAAATATA 59.227 38.462 0.00 0.00 32.22 0.86
437 457 7.285401 ACGTACTCCCTCCGTAAAGAAATATAA 59.715 37.037 0.00 0.00 32.22 0.98
438 458 8.137437 CGTACTCCCTCCGTAAAGAAATATAAA 58.863 37.037 0.00 0.00 0.00 1.40
439 459 9.822185 GTACTCCCTCCGTAAAGAAATATAAAA 57.178 33.333 0.00 0.00 0.00 1.52
440 460 8.959705 ACTCCCTCCGTAAAGAAATATAAAAG 57.040 34.615 0.00 0.00 0.00 2.27
441 461 7.498239 ACTCCCTCCGTAAAGAAATATAAAAGC 59.502 37.037 0.00 0.00 0.00 3.51
442 462 7.340256 TCCCTCCGTAAAGAAATATAAAAGCA 58.660 34.615 0.00 0.00 0.00 3.91
443 463 7.996644 TCCCTCCGTAAAGAAATATAAAAGCAT 59.003 33.333 0.00 0.00 0.00 3.79
444 464 8.630037 CCCTCCGTAAAGAAATATAAAAGCATT 58.370 33.333 0.00 0.00 0.00 3.56
495 515 8.871629 TGCTTTTATATTTGTTTACAGAGGGA 57.128 30.769 0.00 0.00 0.00 4.20
496 516 8.956426 TGCTTTTATATTTGTTTACAGAGGGAG 58.044 33.333 0.00 0.00 0.00 4.30
497 517 8.957466 GCTTTTATATTTGTTTACAGAGGGAGT 58.043 33.333 0.00 0.00 0.00 3.85
549 569 7.124147 TGAGATAATCCAACATGTGTGACTAGA 59.876 37.037 0.00 0.00 0.00 2.43
582 602 6.183360 CCATATGGAGATTGGACAAACACTTC 60.183 42.308 17.49 0.00 37.39 3.01
597 617 7.862675 ACAAACACTTCCTATTAATAGCTCCT 58.137 34.615 15.86 0.00 0.00 3.69
599 619 8.831550 CAAACACTTCCTATTAATAGCTCCTTC 58.168 37.037 15.86 0.00 0.00 3.46
633 653 5.596836 AGAGAACAAATTGCCAAGAAACA 57.403 34.783 0.00 0.00 0.00 2.83
697 721 3.054875 TCATGTAGGACTGAATTGCTGCT 60.055 43.478 0.00 0.00 0.00 4.24
726 751 8.826765 TCTTATCCAGAAAGAAAATCACTAGGT 58.173 33.333 0.00 0.00 30.15 3.08
738 763 6.594788 AAATCACTAGGTCCACTACGTTAA 57.405 37.500 0.00 0.00 0.00 2.01
915 940 3.377172 GGGTGAAACGGTCATTCCATAAG 59.623 47.826 0.00 0.00 38.90 1.73
930 955 2.550208 CCATAAGACGGCCTTATCCACC 60.550 54.545 0.00 0.00 44.13 4.61
937 962 0.694444 GGCCTTATCCACCTCCTCCA 60.694 60.000 0.00 0.00 0.00 3.86
963 988 3.114647 CTCTCGTCCTTCCGGCTCG 62.115 68.421 0.00 0.00 0.00 5.03
977 1002 1.809684 GGCTCGTATAAATCCCAGCC 58.190 55.000 0.00 0.00 39.75 4.85
978 1003 1.348036 GGCTCGTATAAATCCCAGCCT 59.652 52.381 0.34 0.00 42.74 4.58
1623 1657 1.900351 CAGGATGCTCAAGGTCCGA 59.100 57.895 0.00 0.00 37.12 4.55
1660 1694 2.190488 GACAGGGTTCCAGGCCTGAG 62.190 65.000 34.91 23.01 34.74 3.35
1818 1895 6.407412 GGAGTGGAAACTGATGAGTGATCATA 60.407 42.308 0.00 0.00 40.46 2.15
1873 1950 1.153628 CCGGAGAGAACGCGGAATT 60.154 57.895 12.47 0.00 0.00 2.17
1877 1954 2.724839 CGGAGAGAACGCGGAATTTTTG 60.725 50.000 12.47 0.00 0.00 2.44
1945 2050 5.389098 GCTTACAGCAGCAAAATGATTTGTG 60.389 40.000 0.00 0.00 43.27 3.33
1949 2054 3.575256 AGCAGCAAAATGATTTGTGGAGA 59.425 39.130 0.00 0.00 46.19 3.71
1950 2055 4.039488 AGCAGCAAAATGATTTGTGGAGAA 59.961 37.500 0.00 0.00 46.19 2.87
1952 2057 5.535333 CAGCAAAATGATTTGTGGAGAAGT 58.465 37.500 0.00 0.00 46.19 3.01
1960 2065 5.624159 TGATTTGTGGAGAAGTTGATCAGT 58.376 37.500 0.00 0.00 0.00 3.41
1961 2066 5.471116 TGATTTGTGGAGAAGTTGATCAGTG 59.529 40.000 0.00 0.00 0.00 3.66
1962 2067 3.407424 TGTGGAGAAGTTGATCAGTGG 57.593 47.619 0.00 0.00 0.00 4.00
1963 2068 2.038952 TGTGGAGAAGTTGATCAGTGGG 59.961 50.000 0.00 0.00 0.00 4.61
1964 2069 1.003580 TGGAGAAGTTGATCAGTGGGC 59.996 52.381 0.00 0.00 0.00 5.36
1965 2070 1.363744 GAGAAGTTGATCAGTGGGCG 58.636 55.000 0.00 0.00 0.00 6.13
1966 2071 0.687354 AGAAGTTGATCAGTGGGCGT 59.313 50.000 0.00 0.00 0.00 5.68
1967 2072 1.079503 GAAGTTGATCAGTGGGCGTC 58.920 55.000 0.00 0.00 0.00 5.19
1988 2093 0.166161 GGGCGACTTTTTCTTCGAGC 59.834 55.000 0.00 0.00 37.43 5.03
2016 2121 1.292992 CTTATCTGCGCATCAGCACA 58.707 50.000 12.24 0.00 42.92 4.57
2074 2182 2.857592 AGCGAATATGCCAAAAGCTG 57.142 45.000 0.00 0.00 44.23 4.24
2077 2185 2.187707 CGAATATGCCAAAAGCTGTGC 58.812 47.619 0.00 0.00 44.23 4.57
2081 2189 1.750341 ATGCCAAAAGCTGTGCTGCA 61.750 50.000 0.00 0.00 44.23 4.41
2106 2214 6.075762 CAACTGATTGGATGAAACAACTGA 57.924 37.500 0.00 0.00 31.63 3.41
2108 2216 5.132502 ACTGATTGGATGAAACAACTGACA 58.867 37.500 0.00 0.00 0.00 3.58
2109 2217 5.009010 ACTGATTGGATGAAACAACTGACAC 59.991 40.000 0.00 0.00 0.00 3.67
2116 2224 6.545666 TGGATGAAACAACTGACACTTGTTAT 59.454 34.615 11.94 5.18 40.24 1.89
2121 2229 9.037737 TGAAACAACTGACACTTGTTATACTAC 57.962 33.333 11.94 3.90 40.24 2.73
2122 2230 9.257651 GAAACAACTGACACTTGTTATACTACT 57.742 33.333 11.94 0.00 40.24 2.57
2128 2236 8.407064 ACTGACACTTGTTATACTACTATCAGC 58.593 37.037 0.00 0.00 33.58 4.26
2129 2237 7.415229 TGACACTTGTTATACTACTATCAGCG 58.585 38.462 0.00 0.00 0.00 5.18
2130 2238 7.281549 TGACACTTGTTATACTACTATCAGCGA 59.718 37.037 0.00 0.00 0.00 4.93
2131 2239 7.640852 ACACTTGTTATACTACTATCAGCGAG 58.359 38.462 0.00 0.00 0.00 5.03
2132 2240 7.078851 CACTTGTTATACTACTATCAGCGAGG 58.921 42.308 0.00 0.00 0.00 4.63
2133 2241 6.996879 ACTTGTTATACTACTATCAGCGAGGA 59.003 38.462 0.00 0.00 0.00 3.71
2166 2275 2.352503 AAAAGTCACGCCAATGATGC 57.647 45.000 0.00 0.00 0.00 3.91
2167 2276 1.538047 AAAGTCACGCCAATGATGCT 58.462 45.000 0.00 0.00 0.00 3.79
2225 2336 2.931969 GTGTACGTTATTGCCCTGTACC 59.068 50.000 0.00 0.00 35.66 3.34
2267 2378 1.300620 TCGTTGCCCGTTCACTCAG 60.301 57.895 0.00 0.00 37.94 3.35
2301 2422 1.170290 GGCCACGTACAAAACTGCCT 61.170 55.000 0.00 0.00 34.11 4.75
2302 2423 0.237498 GCCACGTACAAAACTGCCTC 59.763 55.000 0.00 0.00 0.00 4.70
2303 2424 1.588674 CCACGTACAAAACTGCCTCA 58.411 50.000 0.00 0.00 0.00 3.86
2337 2458 9.895138 AAACTAAAGTAACAGTCTTAAGGTCAA 57.105 29.630 1.85 0.00 0.00 3.18
2342 2463 7.304497 AGTAACAGTCTTAAGGTCAAGTCAT 57.696 36.000 1.85 0.00 0.00 3.06
2343 2464 8.418597 AGTAACAGTCTTAAGGTCAAGTCATA 57.581 34.615 1.85 0.00 0.00 2.15
2344 2465 8.867097 AGTAACAGTCTTAAGGTCAAGTCATAA 58.133 33.333 1.85 0.00 0.00 1.90
2345 2466 9.485206 GTAACAGTCTTAAGGTCAAGTCATAAA 57.515 33.333 1.85 0.00 0.00 1.40
2346 2467 8.974060 AACAGTCTTAAGGTCAAGTCATAAAA 57.026 30.769 1.85 0.00 0.00 1.52
2354 2475 6.899393 AGGTCAAGTCATAAAATTTCAGCA 57.101 33.333 0.00 0.00 0.00 4.41
2371 2492 6.525121 TTCAGCAATAGGATTAATCGAACG 57.475 37.500 9.32 0.00 0.00 3.95
2397 2518 1.736032 CGTGCCTTCTTCTACCTTCCG 60.736 57.143 0.00 0.00 0.00 4.30
2409 2530 1.066587 CCTTCCGTCATCTCCTCGC 59.933 63.158 0.00 0.00 0.00 5.03
2418 2539 1.901948 ATCTCCTCGCGGCGGATAA 60.902 57.895 23.46 1.39 0.00 1.75
2422 2543 2.027625 CCTCGCGGCGGATAATTCC 61.028 63.158 23.46 0.00 38.81 3.01
2423 2544 1.006102 CTCGCGGCGGATAATTCCT 60.006 57.895 23.46 0.00 40.17 3.36
2424 2545 0.242825 CTCGCGGCGGATAATTCCTA 59.757 55.000 23.46 0.00 40.17 2.94
2425 2546 0.675083 TCGCGGCGGATAATTCCTAA 59.325 50.000 23.46 0.00 40.17 2.69
2426 2547 0.788391 CGCGGCGGATAATTCCTAAC 59.212 55.000 15.84 0.00 40.17 2.34
2427 2548 0.788391 GCGGCGGATAATTCCTAACG 59.212 55.000 9.78 0.00 40.17 3.18
2428 2549 1.870993 GCGGCGGATAATTCCTAACGT 60.871 52.381 9.78 0.00 40.17 3.99
2429 2550 1.790623 CGGCGGATAATTCCTAACGTG 59.209 52.381 0.00 0.00 40.17 4.49
2430 2551 1.529865 GGCGGATAATTCCTAACGTGC 59.470 52.381 0.00 0.00 40.17 5.34
2431 2552 1.529865 GCGGATAATTCCTAACGTGCC 59.470 52.381 0.00 0.00 40.17 5.01
2432 2553 2.140717 CGGATAATTCCTAACGTGCCC 58.859 52.381 0.00 0.00 40.17 5.36
2433 2554 2.501261 GGATAATTCCTAACGTGCCCC 58.499 52.381 0.00 0.00 39.14 5.80
2434 2555 2.105993 GGATAATTCCTAACGTGCCCCT 59.894 50.000 0.00 0.00 39.14 4.79
2435 2556 2.702592 TAATTCCTAACGTGCCCCTG 57.297 50.000 0.00 0.00 0.00 4.45
2436 2557 0.696501 AATTCCTAACGTGCCCCTGT 59.303 50.000 0.00 0.00 0.00 4.00
2437 2558 1.575419 ATTCCTAACGTGCCCCTGTA 58.425 50.000 0.00 0.00 0.00 2.74
2438 2559 1.350071 TTCCTAACGTGCCCCTGTAA 58.650 50.000 0.00 0.00 0.00 2.41
2439 2560 1.575419 TCCTAACGTGCCCCTGTAAT 58.425 50.000 0.00 0.00 0.00 1.89
2440 2561 1.910671 TCCTAACGTGCCCCTGTAATT 59.089 47.619 0.00 0.00 0.00 1.40
2441 2562 3.106054 TCCTAACGTGCCCCTGTAATTA 58.894 45.455 0.00 0.00 0.00 1.40
2442 2563 3.712733 TCCTAACGTGCCCCTGTAATTAT 59.287 43.478 0.00 0.00 0.00 1.28
2443 2564 3.813166 CCTAACGTGCCCCTGTAATTATG 59.187 47.826 0.00 0.00 0.00 1.90
2444 2565 3.359695 AACGTGCCCCTGTAATTATGT 57.640 42.857 0.00 0.00 0.00 2.29
2445 2566 3.359695 ACGTGCCCCTGTAATTATGTT 57.640 42.857 0.00 0.00 0.00 2.71
2446 2567 4.490899 ACGTGCCCCTGTAATTATGTTA 57.509 40.909 0.00 0.00 0.00 2.41
2447 2568 4.448210 ACGTGCCCCTGTAATTATGTTAG 58.552 43.478 0.00 0.00 0.00 2.34
2448 2569 3.250040 CGTGCCCCTGTAATTATGTTAGC 59.750 47.826 0.00 0.00 0.00 3.09
2449 2570 4.204012 GTGCCCCTGTAATTATGTTAGCA 58.796 43.478 0.00 0.00 0.00 3.49
2450 2571 4.827284 GTGCCCCTGTAATTATGTTAGCAT 59.173 41.667 0.00 0.00 39.03 3.79
2451 2572 6.001460 GTGCCCCTGTAATTATGTTAGCATA 58.999 40.000 0.00 0.00 36.58 3.14
2452 2573 6.001460 TGCCCCTGTAATTATGTTAGCATAC 58.999 40.000 0.00 0.00 37.31 2.39
2453 2574 6.001460 GCCCCTGTAATTATGTTAGCATACA 58.999 40.000 0.00 0.00 37.31 2.29
2454 2575 6.488683 GCCCCTGTAATTATGTTAGCATACAA 59.511 38.462 0.00 0.00 37.31 2.41
2455 2576 7.176690 GCCCCTGTAATTATGTTAGCATACAAT 59.823 37.037 0.00 0.00 37.31 2.71
2456 2577 9.733556 CCCCTGTAATTATGTTAGCATACAATA 57.266 33.333 0.00 0.00 37.31 1.90
2466 2587 8.848474 ATGTTAGCATACAATAGTGGGTAATC 57.152 34.615 0.00 0.00 32.73 1.75
2467 2588 6.926826 TGTTAGCATACAATAGTGGGTAATCG 59.073 38.462 0.00 0.00 32.73 3.34
2468 2589 5.801531 AGCATACAATAGTGGGTAATCGA 57.198 39.130 0.00 0.00 0.00 3.59
2469 2590 6.360370 AGCATACAATAGTGGGTAATCGAT 57.640 37.500 0.00 0.00 0.00 3.59
2470 2591 6.398918 AGCATACAATAGTGGGTAATCGATC 58.601 40.000 0.00 0.00 0.00 3.69
2471 2592 6.211584 AGCATACAATAGTGGGTAATCGATCT 59.788 38.462 0.00 0.00 0.00 2.75
2472 2593 7.396339 AGCATACAATAGTGGGTAATCGATCTA 59.604 37.037 0.00 0.00 0.00 1.98
2473 2594 7.702772 GCATACAATAGTGGGTAATCGATCTAG 59.297 40.741 0.00 0.00 0.00 2.43
2474 2595 8.957466 CATACAATAGTGGGTAATCGATCTAGA 58.043 37.037 0.00 0.00 0.00 2.43
2475 2596 7.455641 ACAATAGTGGGTAATCGATCTAGAG 57.544 40.000 0.00 0.00 0.00 2.43
2476 2597 7.005296 ACAATAGTGGGTAATCGATCTAGAGT 58.995 38.462 0.00 0.00 0.00 3.24
2477 2598 7.040340 ACAATAGTGGGTAATCGATCTAGAGTG 60.040 40.741 0.00 0.00 0.00 3.51
2478 2599 4.145807 AGTGGGTAATCGATCTAGAGTGG 58.854 47.826 0.00 0.00 0.00 4.00
2479 2600 2.891580 TGGGTAATCGATCTAGAGTGGC 59.108 50.000 0.00 0.00 0.00 5.01
2480 2601 3.158676 GGGTAATCGATCTAGAGTGGCT 58.841 50.000 0.00 0.00 0.00 4.75
2481 2602 3.191791 GGGTAATCGATCTAGAGTGGCTC 59.808 52.174 0.00 0.00 0.00 4.70
2482 2603 4.076394 GGTAATCGATCTAGAGTGGCTCT 58.924 47.826 0.00 4.02 43.83 4.09
2483 2604 4.155280 GGTAATCGATCTAGAGTGGCTCTC 59.845 50.000 8.49 8.49 40.34 3.20
2494 2615 4.893424 GAGTGGCTCTCTGAAGTAGTAG 57.107 50.000 9.25 0.00 39.86 2.57
2495 2616 3.020984 AGTGGCTCTCTGAAGTAGTAGC 58.979 50.000 0.00 0.00 36.44 3.58
2496 2617 3.020984 GTGGCTCTCTGAAGTAGTAGCT 58.979 50.000 0.00 0.00 36.98 3.32
2497 2618 3.066203 GTGGCTCTCTGAAGTAGTAGCTC 59.934 52.174 0.00 0.00 36.98 4.09
2498 2619 3.283751 GGCTCTCTGAAGTAGTAGCTCA 58.716 50.000 0.00 0.00 36.98 4.26
2499 2620 3.888930 GGCTCTCTGAAGTAGTAGCTCAT 59.111 47.826 0.00 0.00 36.98 2.90
2500 2621 5.067273 GGCTCTCTGAAGTAGTAGCTCATA 58.933 45.833 0.00 0.00 36.98 2.15
2501 2622 5.048991 GGCTCTCTGAAGTAGTAGCTCATAC 60.049 48.000 0.00 0.00 36.98 2.39
2502 2623 5.529430 GCTCTCTGAAGTAGTAGCTCATACA 59.471 44.000 10.06 0.00 36.79 2.29
2503 2624 6.038825 GCTCTCTGAAGTAGTAGCTCATACAA 59.961 42.308 10.06 0.00 36.79 2.41
2504 2625 7.561021 TCTCTGAAGTAGTAGCTCATACAAG 57.439 40.000 10.06 5.60 36.79 3.16
2505 2626 7.339482 TCTCTGAAGTAGTAGCTCATACAAGA 58.661 38.462 10.06 8.58 36.79 3.02
2506 2627 7.996066 TCTCTGAAGTAGTAGCTCATACAAGAT 59.004 37.037 10.06 0.00 36.79 2.40
2507 2628 7.935520 TCTGAAGTAGTAGCTCATACAAGATG 58.064 38.462 10.06 0.00 36.79 2.90
2508 2629 7.013750 TCTGAAGTAGTAGCTCATACAAGATGG 59.986 40.741 10.06 0.00 36.79 3.51
2509 2630 6.833933 TGAAGTAGTAGCTCATACAAGATGGA 59.166 38.462 10.06 0.00 36.79 3.41
2510 2631 7.507277 TGAAGTAGTAGCTCATACAAGATGGAT 59.493 37.037 10.06 0.00 36.79 3.41
2511 2632 7.847711 AGTAGTAGCTCATACAAGATGGATT 57.152 36.000 10.06 0.00 36.79 3.01
2512 2633 8.941995 AGTAGTAGCTCATACAAGATGGATTA 57.058 34.615 10.06 0.00 36.79 1.75
2513 2634 8.798402 AGTAGTAGCTCATACAAGATGGATTAC 58.202 37.037 10.06 0.00 36.79 1.89
2514 2635 7.603180 AGTAGCTCATACAAGATGGATTACA 57.397 36.000 0.00 0.00 36.79 2.41
2515 2636 8.023021 AGTAGCTCATACAAGATGGATTACAA 57.977 34.615 0.00 0.00 36.79 2.41
2516 2637 8.147058 AGTAGCTCATACAAGATGGATTACAAG 58.853 37.037 0.00 0.00 36.79 3.16
2517 2638 6.294473 AGCTCATACAAGATGGATTACAAGG 58.706 40.000 0.00 0.00 0.00 3.61
2518 2639 6.100279 AGCTCATACAAGATGGATTACAAGGA 59.900 38.462 0.00 0.00 0.00 3.36
2519 2640 6.426328 GCTCATACAAGATGGATTACAAGGAG 59.574 42.308 0.00 0.00 0.00 3.69
2520 2641 6.291377 TCATACAAGATGGATTACAAGGAGC 58.709 40.000 0.00 0.00 0.00 4.70
2521 2642 3.535561 ACAAGATGGATTACAAGGAGCG 58.464 45.455 0.00 0.00 0.00 5.03
2522 2643 3.197766 ACAAGATGGATTACAAGGAGCGA 59.802 43.478 0.00 0.00 0.00 4.93
2523 2644 4.141620 ACAAGATGGATTACAAGGAGCGAT 60.142 41.667 0.00 0.00 0.00 4.58
2524 2645 4.696479 AGATGGATTACAAGGAGCGATT 57.304 40.909 0.00 0.00 0.00 3.34
2525 2646 4.384056 AGATGGATTACAAGGAGCGATTG 58.616 43.478 0.00 0.00 0.00 2.67
2526 2647 2.288666 TGGATTACAAGGAGCGATTGC 58.711 47.619 0.00 0.00 43.24 3.56
2527 2648 1.604278 GGATTACAAGGAGCGATTGCC 59.396 52.381 0.00 0.00 44.31 4.52
2528 2649 1.604278 GATTACAAGGAGCGATTGCCC 59.396 52.381 0.00 2.73 44.31 5.36
2529 2650 0.618458 TTACAAGGAGCGATTGCCCT 59.382 50.000 0.00 5.22 44.31 5.19
2530 2651 0.178068 TACAAGGAGCGATTGCCCTC 59.822 55.000 13.55 1.12 44.31 4.30
2531 2652 1.078214 CAAGGAGCGATTGCCCTCA 60.078 57.895 13.55 0.00 44.31 3.86
2532 2653 0.677731 CAAGGAGCGATTGCCCTCAA 60.678 55.000 13.55 0.00 44.31 3.02
2533 2654 0.038166 AAGGAGCGATTGCCCTCAAA 59.962 50.000 13.55 0.00 44.31 2.69
2534 2655 0.257039 AGGAGCGATTGCCCTCAAAT 59.743 50.000 0.00 0.00 44.31 2.32
2535 2656 1.106285 GGAGCGATTGCCCTCAAATT 58.894 50.000 0.00 0.00 44.31 1.82
2536 2657 1.202336 GGAGCGATTGCCCTCAAATTG 60.202 52.381 0.00 0.00 44.31 2.32
2537 2658 0.819582 AGCGATTGCCCTCAAATTGG 59.180 50.000 0.00 0.00 44.31 3.16
2538 2659 0.532115 GCGATTGCCCTCAAATTGGT 59.468 50.000 0.00 0.00 35.56 3.67
2539 2660 1.736696 GCGATTGCCCTCAAATTGGTG 60.737 52.381 0.00 0.00 35.56 4.17
2540 2661 1.818060 CGATTGCCCTCAAATTGGTGA 59.182 47.619 0.00 0.00 35.56 4.02
2541 2662 2.230992 CGATTGCCCTCAAATTGGTGAA 59.769 45.455 0.00 0.00 35.56 3.18
2542 2663 3.674138 CGATTGCCCTCAAATTGGTGAAG 60.674 47.826 0.00 0.00 35.56 3.02
2543 2664 2.673775 TGCCCTCAAATTGGTGAAGA 57.326 45.000 0.00 0.00 0.00 2.87
2544 2665 2.956132 TGCCCTCAAATTGGTGAAGAA 58.044 42.857 0.00 0.00 0.00 2.52
2545 2666 3.303938 TGCCCTCAAATTGGTGAAGAAA 58.696 40.909 0.00 0.00 0.00 2.52
2546 2667 3.708631 TGCCCTCAAATTGGTGAAGAAAA 59.291 39.130 0.00 0.00 0.00 2.29
2547 2668 4.347583 TGCCCTCAAATTGGTGAAGAAAAT 59.652 37.500 0.00 0.00 0.00 1.82
2548 2669 4.692155 GCCCTCAAATTGGTGAAGAAAATG 59.308 41.667 0.00 0.00 0.00 2.32
2549 2670 5.240121 CCCTCAAATTGGTGAAGAAAATGG 58.760 41.667 0.00 0.00 0.00 3.16
2550 2671 5.011943 CCCTCAAATTGGTGAAGAAAATGGA 59.988 40.000 0.00 0.00 0.00 3.41
2551 2672 6.464180 CCCTCAAATTGGTGAAGAAAATGGAA 60.464 38.462 0.00 0.00 0.00 3.53
2552 2673 6.647895 CCTCAAATTGGTGAAGAAAATGGAAG 59.352 38.462 0.00 0.00 0.00 3.46
2553 2674 6.523840 TCAAATTGGTGAAGAAAATGGAAGG 58.476 36.000 0.00 0.00 0.00 3.46
2554 2675 5.488262 AATTGGTGAAGAAAATGGAAGGG 57.512 39.130 0.00 0.00 0.00 3.95
2555 2676 2.888212 TGGTGAAGAAAATGGAAGGGG 58.112 47.619 0.00 0.00 0.00 4.79
2556 2677 2.448961 TGGTGAAGAAAATGGAAGGGGA 59.551 45.455 0.00 0.00 0.00 4.81
2557 2678 3.116939 TGGTGAAGAAAATGGAAGGGGAA 60.117 43.478 0.00 0.00 0.00 3.97
2558 2679 3.901222 GGTGAAGAAAATGGAAGGGGAAA 59.099 43.478 0.00 0.00 0.00 3.13
2559 2680 4.021104 GGTGAAGAAAATGGAAGGGGAAAG 60.021 45.833 0.00 0.00 0.00 2.62
2560 2681 4.588951 GTGAAGAAAATGGAAGGGGAAAGT 59.411 41.667 0.00 0.00 0.00 2.66
2561 2682 5.773176 GTGAAGAAAATGGAAGGGGAAAGTA 59.227 40.000 0.00 0.00 0.00 2.24
2562 2683 6.010219 TGAAGAAAATGGAAGGGGAAAGTAG 58.990 40.000 0.00 0.00 0.00 2.57
2563 2684 4.344978 AGAAAATGGAAGGGGAAAGTAGC 58.655 43.478 0.00 0.00 0.00 3.58
2564 2685 3.825908 AAATGGAAGGGGAAAGTAGCA 57.174 42.857 0.00 0.00 0.00 3.49
2565 2686 3.372440 AATGGAAGGGGAAAGTAGCAG 57.628 47.619 0.00 0.00 0.00 4.24
2566 2687 0.991920 TGGAAGGGGAAAGTAGCAGG 59.008 55.000 0.00 0.00 0.00 4.85
2567 2688 0.992695 GGAAGGGGAAAGTAGCAGGT 59.007 55.000 0.00 0.00 0.00 4.00
2568 2689 2.193993 GGAAGGGGAAAGTAGCAGGTA 58.806 52.381 0.00 0.00 0.00 3.08
2569 2690 2.170817 GGAAGGGGAAAGTAGCAGGTAG 59.829 54.545 0.00 0.00 0.00 3.18
2570 2691 1.205055 AGGGGAAAGTAGCAGGTAGC 58.795 55.000 0.00 0.00 46.19 3.58
2589 2710 3.670377 GCCGCCGTTGCCTTTTCT 61.670 61.111 0.00 0.00 0.00 2.52
2590 2711 2.255252 CCGCCGTTGCCTTTTCTG 59.745 61.111 0.00 0.00 0.00 3.02
2591 2712 2.258013 CCGCCGTTGCCTTTTCTGA 61.258 57.895 0.00 0.00 0.00 3.27
2592 2713 1.586154 CCGCCGTTGCCTTTTCTGAT 61.586 55.000 0.00 0.00 0.00 2.90
2593 2714 0.179189 CGCCGTTGCCTTTTCTGATC 60.179 55.000 0.00 0.00 0.00 2.92
2594 2715 0.171231 GCCGTTGCCTTTTCTGATCC 59.829 55.000 0.00 0.00 0.00 3.36
2595 2716 1.826385 CCGTTGCCTTTTCTGATCCT 58.174 50.000 0.00 0.00 0.00 3.24
2596 2717 1.740025 CCGTTGCCTTTTCTGATCCTC 59.260 52.381 0.00 0.00 0.00 3.71
2597 2718 2.616510 CCGTTGCCTTTTCTGATCCTCT 60.617 50.000 0.00 0.00 0.00 3.69
2598 2719 3.369471 CCGTTGCCTTTTCTGATCCTCTA 60.369 47.826 0.00 0.00 0.00 2.43
2599 2720 3.868077 CGTTGCCTTTTCTGATCCTCTAG 59.132 47.826 0.00 0.00 0.00 2.43
2600 2721 4.382040 CGTTGCCTTTTCTGATCCTCTAGA 60.382 45.833 0.00 0.00 0.00 2.43
2601 2722 5.679601 GTTGCCTTTTCTGATCCTCTAGAT 58.320 41.667 0.00 0.00 38.17 1.98
2602 2723 5.287674 TGCCTTTTCTGATCCTCTAGATG 57.712 43.478 0.00 0.00 34.42 2.90
2603 2724 4.064388 GCCTTTTCTGATCCTCTAGATGC 58.936 47.826 0.00 0.00 34.42 3.91
2604 2725 4.640364 CCTTTTCTGATCCTCTAGATGCC 58.360 47.826 0.00 0.00 34.42 4.40
2605 2726 4.504689 CCTTTTCTGATCCTCTAGATGCCC 60.505 50.000 0.00 0.00 34.42 5.36
2606 2727 1.916506 TCTGATCCTCTAGATGCCCG 58.083 55.000 0.00 0.00 34.42 6.13
2607 2728 1.145945 TCTGATCCTCTAGATGCCCGT 59.854 52.381 0.00 0.00 34.42 5.28
2608 2729 1.543802 CTGATCCTCTAGATGCCCGTC 59.456 57.143 0.00 0.00 34.42 4.79
2609 2730 1.145945 TGATCCTCTAGATGCCCGTCT 59.854 52.381 0.00 0.00 34.42 4.18
2610 2731 1.816224 GATCCTCTAGATGCCCGTCTC 59.184 57.143 0.00 0.00 34.42 3.36
2611 2732 0.535328 TCCTCTAGATGCCCGTCTCG 60.535 60.000 0.00 0.00 0.00 4.04
2612 2733 1.284408 CTCTAGATGCCCGTCTCGC 59.716 63.158 0.00 0.00 0.00 5.03
2613 2734 1.152943 TCTAGATGCCCGTCTCGCT 60.153 57.895 0.00 0.00 0.00 4.93
2614 2735 1.007964 CTAGATGCCCGTCTCGCTG 60.008 63.158 0.00 0.00 0.00 5.18
2615 2736 2.413437 CTAGATGCCCGTCTCGCTGG 62.413 65.000 0.00 0.00 0.00 4.85
2629 2750 4.090588 CTGGCCGCCCGAGGTTAA 62.091 66.667 7.03 0.00 0.00 2.01
2630 2751 4.090588 TGGCCGCCCGAGGTTAAG 62.091 66.667 7.03 0.00 0.00 1.85
2631 2752 4.091939 GGCCGCCCGAGGTTAAGT 62.092 66.667 0.00 0.00 0.00 2.24
2632 2753 2.724273 GGCCGCCCGAGGTTAAGTA 61.724 63.158 0.00 0.00 0.00 2.24
2633 2754 1.444672 GCCGCCCGAGGTTAAGTAT 59.555 57.895 0.00 0.00 0.00 2.12
2634 2755 0.878961 GCCGCCCGAGGTTAAGTATG 60.879 60.000 0.00 0.00 0.00 2.39
2635 2756 0.748450 CCGCCCGAGGTTAAGTATGA 59.252 55.000 0.00 0.00 0.00 2.15
2636 2757 1.269621 CCGCCCGAGGTTAAGTATGAG 60.270 57.143 0.00 0.00 0.00 2.90
2637 2758 1.867166 GCCCGAGGTTAAGTATGAGC 58.133 55.000 0.00 0.00 0.00 4.26
2638 2759 1.540580 GCCCGAGGTTAAGTATGAGCC 60.541 57.143 0.00 0.00 0.00 4.70
2639 2760 1.760613 CCCGAGGTTAAGTATGAGCCA 59.239 52.381 0.00 0.00 0.00 4.75
2640 2761 2.224066 CCCGAGGTTAAGTATGAGCCAG 60.224 54.545 0.00 0.00 0.00 4.85
2641 2762 2.474816 CGAGGTTAAGTATGAGCCAGC 58.525 52.381 0.00 0.00 0.00 4.85
2642 2763 2.101582 CGAGGTTAAGTATGAGCCAGCT 59.898 50.000 0.00 0.00 0.00 4.24
2643 2764 3.318275 CGAGGTTAAGTATGAGCCAGCTA 59.682 47.826 0.00 0.00 0.00 3.32
2644 2765 4.623002 GAGGTTAAGTATGAGCCAGCTAC 58.377 47.826 0.00 0.00 0.00 3.58
2645 2766 3.388350 AGGTTAAGTATGAGCCAGCTACC 59.612 47.826 0.00 0.00 0.00 3.18
2646 2767 3.381949 GTTAAGTATGAGCCAGCTACCG 58.618 50.000 0.00 0.00 0.00 4.02
2647 2768 0.753262 AAGTATGAGCCAGCTACCGG 59.247 55.000 0.00 0.00 0.00 5.28
2648 2769 1.115930 AGTATGAGCCAGCTACCGGG 61.116 60.000 6.32 0.00 0.00 5.73
2649 2770 1.075525 TATGAGCCAGCTACCGGGT 60.076 57.895 6.32 4.46 36.82 5.28
2651 2772 3.851128 GAGCCAGCTACCGGGTCC 61.851 72.222 6.32 0.00 43.78 4.46
2652 2773 4.715130 AGCCAGCTACCGGGTCCA 62.715 66.667 6.32 0.00 0.00 4.02
2653 2774 4.468689 GCCAGCTACCGGGTCCAC 62.469 72.222 6.32 0.00 0.00 4.02
2654 2775 2.683933 CCAGCTACCGGGTCCACT 60.684 66.667 6.32 0.00 0.00 4.00
2655 2776 2.722201 CCAGCTACCGGGTCCACTC 61.722 68.421 6.32 0.00 0.00 3.51
2656 2777 2.754658 AGCTACCGGGTCCACTCG 60.755 66.667 6.32 0.00 0.00 4.18
2657 2778 3.066814 GCTACCGGGTCCACTCGT 61.067 66.667 6.32 0.00 0.00 4.18
2658 2779 3.061260 GCTACCGGGTCCACTCGTC 62.061 68.421 6.32 0.00 0.00 4.20
2659 2780 1.676635 CTACCGGGTCCACTCGTCA 60.677 63.158 6.32 0.00 0.00 4.35
2660 2781 1.654954 CTACCGGGTCCACTCGTCAG 61.655 65.000 6.32 0.00 0.00 3.51
2661 2782 4.436998 CCGGGTCCACTCGTCAGC 62.437 72.222 0.00 0.00 0.00 4.26
2662 2783 4.778415 CGGGTCCACTCGTCAGCG 62.778 72.222 0.00 0.00 39.92 5.18
2663 2784 4.436998 GGGTCCACTCGTCAGCGG 62.437 72.222 0.00 0.00 38.89 5.52
2664 2785 4.436998 GGTCCACTCGTCAGCGGG 62.437 72.222 0.00 0.00 45.67 6.13
2671 2792 3.966026 CTCGTCAGCGGGTTCGGTC 62.966 68.421 0.00 0.00 46.01 4.79
2712 2833 4.729918 GCTCCTGCAGGTGGGGTG 62.730 72.222 31.58 16.10 39.41 4.61
2713 2834 4.039092 CTCCTGCAGGTGGGGTGG 62.039 72.222 31.58 5.23 36.34 4.61
2714 2835 4.918360 TCCTGCAGGTGGGGTGGT 62.918 66.667 31.58 0.00 36.34 4.16
2715 2836 4.351054 CCTGCAGGTGGGGTGGTC 62.351 72.222 25.53 0.00 0.00 4.02
2716 2837 3.252284 CTGCAGGTGGGGTGGTCT 61.252 66.667 5.57 0.00 0.00 3.85
2717 2838 2.776526 TGCAGGTGGGGTGGTCTT 60.777 61.111 0.00 0.00 0.00 3.01
2718 2839 2.282462 GCAGGTGGGGTGGTCTTG 60.282 66.667 0.00 0.00 0.00 3.02
2719 2840 2.282462 CAGGTGGGGTGGTCTTGC 60.282 66.667 0.00 0.00 0.00 4.01
2720 2841 3.580319 AGGTGGGGTGGTCTTGCC 61.580 66.667 0.00 0.00 37.90 4.52
2721 2842 3.897122 GGTGGGGTGGTCTTGCCA 61.897 66.667 0.00 0.00 46.95 4.92
2729 2850 3.637273 GGTCTTGCCAGGGACCGT 61.637 66.667 3.75 0.00 41.82 4.83
2730 2851 2.358737 GTCTTGCCAGGGACCGTG 60.359 66.667 7.23 7.23 0.00 4.94
2731 2852 2.525629 TCTTGCCAGGGACCGTGA 60.526 61.111 15.84 0.00 0.00 4.35
2732 2853 2.358737 CTTGCCAGGGACCGTGAC 60.359 66.667 15.84 4.52 0.00 3.67
2733 2854 3.164977 TTGCCAGGGACCGTGACA 61.165 61.111 15.84 7.46 0.00 3.58
2734 2855 2.469465 CTTGCCAGGGACCGTGACAT 62.469 60.000 15.84 0.00 0.00 3.06
2735 2856 2.125106 GCCAGGGACCGTGACATC 60.125 66.667 15.84 0.00 0.00 3.06
2736 2857 2.584608 CCAGGGACCGTGACATCC 59.415 66.667 15.84 0.00 0.00 3.51
2759 2880 2.247790 TTCTTGCGAAGAGGCTTGC 58.752 52.632 0.00 0.00 39.03 4.01
2760 2881 1.237285 TTCTTGCGAAGAGGCTTGCC 61.237 55.000 2.97 2.97 39.03 4.52
2761 2882 2.672996 TTGCGAAGAGGCTTGCCC 60.673 61.111 8.17 0.13 0.00 5.36
2762 2883 4.722700 TGCGAAGAGGCTTGCCCC 62.723 66.667 8.17 0.00 0.00 5.80
2764 2885 4.033776 CGAAGAGGCTTGCCCCCA 62.034 66.667 8.17 0.00 0.00 4.96
2765 2886 2.440599 GAAGAGGCTTGCCCCCAA 59.559 61.111 8.17 0.00 0.00 4.12
2772 2893 3.612251 CTTGCCCCCAAGCATCTG 58.388 61.111 0.00 0.00 43.64 2.90
2773 2894 2.681064 TTGCCCCCAAGCATCTGC 60.681 61.111 0.00 0.00 43.64 4.26
2784 2905 3.516263 GCATCTGCGTCCGAAAATC 57.484 52.632 0.00 0.00 0.00 2.17
2785 2906 0.315382 GCATCTGCGTCCGAAAATCG 60.315 55.000 0.00 0.00 40.07 3.34
2786 2907 1.277326 CATCTGCGTCCGAAAATCGA 58.723 50.000 0.58 0.00 43.74 3.59
2787 2908 1.256376 CATCTGCGTCCGAAAATCGAG 59.744 52.381 0.58 0.00 43.74 4.04
2788 2909 1.076533 TCTGCGTCCGAAAATCGAGC 61.077 55.000 0.58 4.88 43.74 5.03
2789 2910 1.078759 CTGCGTCCGAAAATCGAGCT 61.079 55.000 0.58 0.00 43.74 4.09
2790 2911 0.669318 TGCGTCCGAAAATCGAGCTT 60.669 50.000 0.58 0.00 43.74 3.74
2791 2912 0.247301 GCGTCCGAAAATCGAGCTTG 60.247 55.000 0.58 0.00 43.74 4.01
2792 2913 0.247301 CGTCCGAAAATCGAGCTTGC 60.247 55.000 0.58 0.00 43.74 4.01
2793 2914 0.796312 GTCCGAAAATCGAGCTTGCA 59.204 50.000 0.58 0.00 43.74 4.08
2794 2915 1.078709 TCCGAAAATCGAGCTTGCAG 58.921 50.000 0.58 0.00 43.74 4.41
2795 2916 0.798776 CCGAAAATCGAGCTTGCAGT 59.201 50.000 0.58 0.00 43.74 4.40
2796 2917 1.197721 CCGAAAATCGAGCTTGCAGTT 59.802 47.619 0.58 0.00 43.74 3.16
2797 2918 2.499896 CGAAAATCGAGCTTGCAGTTC 58.500 47.619 0.00 0.00 43.74 3.01
2798 2919 2.096268 CGAAAATCGAGCTTGCAGTTCA 60.096 45.455 0.00 0.00 43.74 3.18
2799 2920 3.486584 GAAAATCGAGCTTGCAGTTCAG 58.513 45.455 0.00 0.00 0.00 3.02
2800 2921 0.801251 AATCGAGCTTGCAGTTCAGC 59.199 50.000 0.00 0.00 0.00 4.26
2801 2922 0.036577 ATCGAGCTTGCAGTTCAGCT 60.037 50.000 10.36 10.36 40.68 4.24
2802 2923 0.603065 TCGAGCTTGCAGTTCAGCTA 59.397 50.000 10.54 0.00 37.79 3.32
2803 2924 0.997932 CGAGCTTGCAGTTCAGCTAG 59.002 55.000 10.54 7.18 39.78 3.42
2804 2925 1.367659 GAGCTTGCAGTTCAGCTAGG 58.632 55.000 10.54 0.00 37.74 3.02
2805 2926 0.689623 AGCTTGCAGTTCAGCTAGGT 59.310 50.000 8.87 0.00 41.79 3.08
2806 2927 1.082690 GCTTGCAGTTCAGCTAGGTC 58.917 55.000 0.75 0.00 37.74 3.85
2807 2928 1.338579 GCTTGCAGTTCAGCTAGGTCT 60.339 52.381 0.75 0.00 37.74 3.85
2808 2929 2.873649 GCTTGCAGTTCAGCTAGGTCTT 60.874 50.000 0.75 0.00 37.74 3.01
2809 2930 2.751166 TGCAGTTCAGCTAGGTCTTC 57.249 50.000 0.00 0.00 34.99 2.87
2810 2931 1.276421 TGCAGTTCAGCTAGGTCTTCC 59.724 52.381 0.00 0.00 34.99 3.46
2811 2932 1.406205 GCAGTTCAGCTAGGTCTTCCC 60.406 57.143 0.00 0.00 0.00 3.97
2812 2933 1.902508 CAGTTCAGCTAGGTCTTCCCA 59.097 52.381 0.00 0.00 34.66 4.37
2813 2934 2.303022 CAGTTCAGCTAGGTCTTCCCAA 59.697 50.000 0.00 0.00 34.66 4.12
2814 2935 2.569404 AGTTCAGCTAGGTCTTCCCAAG 59.431 50.000 0.00 0.00 34.66 3.61
2815 2936 2.303311 GTTCAGCTAGGTCTTCCCAAGT 59.697 50.000 0.00 0.00 34.66 3.16
2816 2937 3.468071 TCAGCTAGGTCTTCCCAAGTA 57.532 47.619 0.00 0.00 34.66 2.24
2817 2938 3.995636 TCAGCTAGGTCTTCCCAAGTAT 58.004 45.455 0.00 0.00 34.66 2.12
2818 2939 3.961408 TCAGCTAGGTCTTCCCAAGTATC 59.039 47.826 0.00 0.00 34.66 2.24
2819 2940 3.964031 CAGCTAGGTCTTCCCAAGTATCT 59.036 47.826 0.00 0.00 34.66 1.98
2820 2941 4.407296 CAGCTAGGTCTTCCCAAGTATCTT 59.593 45.833 0.00 0.00 34.66 2.40
2821 2942 4.651962 AGCTAGGTCTTCCCAAGTATCTTC 59.348 45.833 0.00 0.00 34.66 2.87
2822 2943 4.500035 GCTAGGTCTTCCCAAGTATCTTCG 60.500 50.000 0.00 0.00 34.66 3.79
2823 2944 3.709587 AGGTCTTCCCAAGTATCTTCGA 58.290 45.455 0.00 0.00 34.66 3.71
2824 2945 3.447944 AGGTCTTCCCAAGTATCTTCGAC 59.552 47.826 0.00 0.00 34.66 4.20
2825 2946 3.194968 GGTCTTCCCAAGTATCTTCGACA 59.805 47.826 0.00 0.00 0.00 4.35
2826 2947 4.322499 GGTCTTCCCAAGTATCTTCGACAA 60.322 45.833 0.00 0.00 0.00 3.18
2827 2948 4.626172 GTCTTCCCAAGTATCTTCGACAAC 59.374 45.833 0.00 0.00 0.00 3.32
2828 2949 4.527038 TCTTCCCAAGTATCTTCGACAACT 59.473 41.667 0.00 0.00 0.00 3.16
2829 2950 4.884668 TCCCAAGTATCTTCGACAACTT 57.115 40.909 0.00 0.00 32.52 2.66
2830 2951 4.817517 TCCCAAGTATCTTCGACAACTTC 58.182 43.478 0.00 0.00 29.93 3.01
2831 2952 4.282449 TCCCAAGTATCTTCGACAACTTCA 59.718 41.667 0.00 0.00 29.93 3.02
2832 2953 5.046591 TCCCAAGTATCTTCGACAACTTCAT 60.047 40.000 0.00 0.00 29.93 2.57
2833 2954 5.063944 CCCAAGTATCTTCGACAACTTCATG 59.936 44.000 0.00 0.00 29.93 3.07
2834 2955 5.063944 CCAAGTATCTTCGACAACTTCATGG 59.936 44.000 0.00 0.00 29.93 3.66
2835 2956 5.407407 AGTATCTTCGACAACTTCATGGT 57.593 39.130 0.00 0.00 0.00 3.55
2836 2957 5.794894 AGTATCTTCGACAACTTCATGGTT 58.205 37.500 0.00 0.00 0.00 3.67
2837 2958 6.931838 AGTATCTTCGACAACTTCATGGTTA 58.068 36.000 0.00 0.00 0.00 2.85
2838 2959 7.036220 AGTATCTTCGACAACTTCATGGTTAG 58.964 38.462 0.00 0.00 0.00 2.34
2839 2960 5.462530 TCTTCGACAACTTCATGGTTAGA 57.537 39.130 0.00 0.00 0.00 2.10
2840 2961 5.227908 TCTTCGACAACTTCATGGTTAGAC 58.772 41.667 0.00 0.00 0.00 2.59
2841 2962 3.921677 TCGACAACTTCATGGTTAGACC 58.078 45.455 0.00 0.00 39.22 3.85
2852 2973 2.747177 TGGTTAGACCATCGGATGAGT 58.253 47.619 19.30 14.39 44.79 3.41
2853 2974 2.693591 TGGTTAGACCATCGGATGAGTC 59.306 50.000 19.30 20.85 44.79 3.36
2854 2975 2.036089 GGTTAGACCATCGGATGAGTCC 59.964 54.545 23.89 14.92 38.42 3.85
2855 2976 1.996798 TAGACCATCGGATGAGTCCC 58.003 55.000 23.89 10.70 41.83 4.46
2856 2977 0.263172 AGACCATCGGATGAGTCCCT 59.737 55.000 23.89 12.29 41.83 4.20
2857 2978 0.390860 GACCATCGGATGAGTCCCTG 59.609 60.000 19.30 3.33 41.83 4.45
2858 2979 1.070445 CCATCGGATGAGTCCCTGC 59.930 63.158 19.30 0.00 41.83 4.85
2859 2980 1.406065 CCATCGGATGAGTCCCTGCT 61.406 60.000 19.30 0.00 41.83 4.24
2860 2981 0.033228 CATCGGATGAGTCCCTGCTC 59.967 60.000 12.67 0.00 41.83 4.26
2861 2982 1.459455 ATCGGATGAGTCCCTGCTCG 61.459 60.000 0.00 0.00 41.83 5.03
2862 2983 2.121538 CGGATGAGTCCCTGCTCGA 61.122 63.158 0.00 0.00 41.83 4.04
2863 2984 1.459455 CGGATGAGTCCCTGCTCGAT 61.459 60.000 0.00 0.00 41.83 3.59
2864 2985 0.316841 GGATGAGTCCCTGCTCGATC 59.683 60.000 0.00 0.00 38.69 3.69
2865 2986 1.035923 GATGAGTCCCTGCTCGATCA 58.964 55.000 0.00 0.00 38.28 2.92
2866 2987 1.617850 GATGAGTCCCTGCTCGATCAT 59.382 52.381 0.00 0.00 38.28 2.45
2867 2988 0.749049 TGAGTCCCTGCTCGATCATG 59.251 55.000 0.00 0.00 38.28 3.07
2868 2989 0.599728 GAGTCCCTGCTCGATCATGC 60.600 60.000 0.00 0.00 0.00 4.06
2869 2990 1.047596 AGTCCCTGCTCGATCATGCT 61.048 55.000 8.15 0.00 0.00 3.79
2870 2991 0.599728 GTCCCTGCTCGATCATGCTC 60.600 60.000 8.15 0.00 0.00 4.26
2871 2992 1.301558 CCCTGCTCGATCATGCTCC 60.302 63.158 8.15 0.00 0.00 4.70
2872 2993 1.301558 CCTGCTCGATCATGCTCCC 60.302 63.158 8.15 0.00 0.00 4.30
2873 2994 1.664017 CTGCTCGATCATGCTCCCG 60.664 63.158 8.15 0.00 0.00 5.14
2874 2995 3.040763 GCTCGATCATGCTCCCGC 61.041 66.667 0.00 0.00 0.00 6.13
2875 2996 2.732468 CTCGATCATGCTCCCGCG 60.732 66.667 0.00 0.00 39.65 6.46
2876 2997 3.490793 CTCGATCATGCTCCCGCGT 62.491 63.158 4.92 0.00 39.65 6.01
2877 2998 3.032609 CGATCATGCTCCCGCGTC 61.033 66.667 4.92 0.00 39.65 5.19
2878 2999 2.419198 GATCATGCTCCCGCGTCT 59.581 61.111 4.92 0.00 39.65 4.18
2879 3000 1.227380 GATCATGCTCCCGCGTCTT 60.227 57.895 4.92 0.00 39.65 3.01
2880 3001 0.811616 GATCATGCTCCCGCGTCTTT 60.812 55.000 4.92 0.00 39.65 2.52
2881 3002 0.392998 ATCATGCTCCCGCGTCTTTT 60.393 50.000 4.92 0.00 39.65 2.27
2882 3003 1.135315 CATGCTCCCGCGTCTTTTG 59.865 57.895 4.92 0.00 39.65 2.44
2883 3004 2.690778 ATGCTCCCGCGTCTTTTGC 61.691 57.895 4.92 0.97 39.65 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 2.282674 TAGACCCAGTCGCCACGT 60.283 61.111 0.00 0.00 37.67 4.49
91 92 2.147150 TGATGATCGACTAGAGCGGAG 58.853 52.381 0.00 0.00 38.28 4.63
209 228 2.204748 CCATGCATGGGTCCCAAAG 58.795 57.895 34.31 12.06 44.31 2.77
416 436 7.497909 TGCTTTTATATTTCTTTACGGAGGGAG 59.502 37.037 0.00 0.00 0.00 4.30
417 437 7.340256 TGCTTTTATATTTCTTTACGGAGGGA 58.660 34.615 0.00 0.00 0.00 4.20
469 489 9.474313 TCCCTCTGTAAACAAATATAAAAGCAT 57.526 29.630 0.00 0.00 0.00 3.79
470 490 8.871629 TCCCTCTGTAAACAAATATAAAAGCA 57.128 30.769 0.00 0.00 0.00 3.91
471 491 8.957466 ACTCCCTCTGTAAACAAATATAAAAGC 58.043 33.333 0.00 0.00 0.00 3.51
476 496 8.921205 GGAGTACTCCCTCTGTAAACAAATATA 58.079 37.037 28.87 0.00 43.94 0.86
477 497 7.793036 GGAGTACTCCCTCTGTAAACAAATAT 58.207 38.462 28.87 0.00 43.94 1.28
478 498 7.179076 GGAGTACTCCCTCTGTAAACAAATA 57.821 40.000 28.87 0.00 43.94 1.40
479 499 6.051179 GGAGTACTCCCTCTGTAAACAAAT 57.949 41.667 28.87 0.00 43.94 2.32
480 500 5.479124 GGAGTACTCCCTCTGTAAACAAA 57.521 43.478 28.87 0.00 43.94 2.83
494 514 6.153000 TGGTTGACATCTTTAGAGGAGTACTC 59.847 42.308 14.87 14.87 46.98 2.59
495 515 6.017192 TGGTTGACATCTTTAGAGGAGTACT 58.983 40.000 0.00 0.00 0.00 2.73
496 516 6.282199 TGGTTGACATCTTTAGAGGAGTAC 57.718 41.667 0.00 0.00 0.00 2.73
497 517 5.422331 CCTGGTTGACATCTTTAGAGGAGTA 59.578 44.000 0.00 0.00 0.00 2.59
498 518 4.223923 CCTGGTTGACATCTTTAGAGGAGT 59.776 45.833 0.00 0.00 0.00 3.85
499 519 4.467795 TCCTGGTTGACATCTTTAGAGGAG 59.532 45.833 0.00 0.00 0.00 3.69
500 520 4.425772 TCCTGGTTGACATCTTTAGAGGA 58.574 43.478 0.00 0.00 0.00 3.71
501 521 4.826274 TCCTGGTTGACATCTTTAGAGG 57.174 45.455 0.00 0.00 0.00 3.69
502 522 5.982356 TCATCCTGGTTGACATCTTTAGAG 58.018 41.667 3.33 0.00 0.00 2.43
503 523 5.721480 TCTCATCCTGGTTGACATCTTTAGA 59.279 40.000 3.33 0.00 0.00 2.10
504 524 5.982356 TCTCATCCTGGTTGACATCTTTAG 58.018 41.667 3.33 0.00 0.00 1.85
549 569 4.796606 CCAATCTCCATATGGAAGTTGGT 58.203 43.478 34.39 18.76 44.92 3.67
571 591 7.988028 AGGAGCTATTAATAGGAAGTGTTTGTC 59.012 37.037 21.30 3.19 0.00 3.18
597 617 5.745312 TTGTTCTCTAATCTGGCTCTGAA 57.255 39.130 0.00 0.00 0.00 3.02
599 619 6.677431 GCAATTTGTTCTCTAATCTGGCTCTG 60.677 42.308 0.00 0.00 0.00 3.35
633 653 1.202498 GCGCCCGGAAACTATAGAAGT 60.202 52.381 0.73 0.00 41.49 3.01
726 751 1.337447 GGCAGCTGTTAACGTAGTGGA 60.337 52.381 16.64 0.00 45.00 4.02
767 792 2.089201 GTGGTTAACAGGATTTCGGGG 58.911 52.381 8.10 0.00 0.00 5.73
915 940 1.049289 AGGAGGTGGATAAGGCCGTC 61.049 60.000 0.00 0.00 0.00 4.79
930 955 1.135141 CGAGAGCAGAAAGTGGAGGAG 60.135 57.143 0.00 0.00 0.00 3.69
937 962 1.273886 GGAAGGACGAGAGCAGAAAGT 59.726 52.381 0.00 0.00 0.00 2.66
963 988 4.141344 TGGTGGTTAGGCTGGGATTTATAC 60.141 45.833 0.00 0.00 0.00 1.47
977 1002 3.788766 GCGTGCGCTGGTGGTTAG 61.789 66.667 9.73 0.00 38.26 2.34
1058 1083 1.073923 AGGGGAAACGTGAAGCAGATT 59.926 47.619 0.00 0.00 0.00 2.40
1134 1159 2.747460 GTGCTCCTCGCCATTGCA 60.747 61.111 0.00 0.00 38.05 4.08
1368 1393 1.289066 CGGCTTCGTCTTCCTCACA 59.711 57.895 0.00 0.00 0.00 3.58
1370 1395 1.906824 ACCGGCTTCGTCTTCCTCA 60.907 57.895 0.00 0.00 0.00 3.86
1581 1615 2.660206 CCCATCCCGTCGTTCACA 59.340 61.111 0.00 0.00 0.00 3.58
1623 1657 0.894184 TCTTCTTCCAGACCGCGTCT 60.894 55.000 4.92 5.30 44.44 4.18
1903 2002 7.341342 CTGTAAGCACAATTAGCAGTAGCTGA 61.341 42.308 0.00 0.00 42.51 4.26
1945 2050 1.743996 GCCCACTGATCAACTTCTCC 58.256 55.000 0.00 0.00 0.00 3.71
1949 2054 0.687354 AGACGCCCACTGATCAACTT 59.313 50.000 0.00 0.00 0.00 2.66
1950 2055 0.036952 CAGACGCCCACTGATCAACT 60.037 55.000 0.00 0.00 37.54 3.16
1952 2057 1.296392 CCAGACGCCCACTGATCAA 59.704 57.895 0.00 0.00 37.54 2.57
1965 2070 4.943896 CTCGAAGAAAAAGTCGCCCAGAC 61.944 52.174 0.00 0.00 43.66 3.51
1966 2071 1.069513 TCGAAGAAAAAGTCGCCCAGA 59.930 47.619 0.00 0.00 37.19 3.86
1967 2072 1.461127 CTCGAAGAAAAAGTCGCCCAG 59.539 52.381 0.00 0.00 37.19 4.45
1988 2093 0.370273 GCGCAGATAAGGACAACACG 59.630 55.000 0.30 0.00 0.00 4.49
2074 2182 3.484524 CAATCAGTTGGTGCAGCAC 57.515 52.632 20.03 17.97 0.00 4.40
2095 2203 9.037737 GTAGTATAACAAGTGTCAGTTGTTTCA 57.962 33.333 33.01 21.69 46.34 2.69
2096 2204 9.257651 AGTAGTATAACAAGTGTCAGTTGTTTC 57.742 33.333 33.01 24.48 46.34 2.78
2106 2214 7.255173 CCTCGCTGATAGTAGTATAACAAGTGT 60.255 40.741 0.00 0.00 0.00 3.55
2108 2216 6.996879 TCCTCGCTGATAGTAGTATAACAAGT 59.003 38.462 0.00 0.00 0.00 3.16
2109 2217 7.436430 TCCTCGCTGATAGTAGTATAACAAG 57.564 40.000 0.00 0.00 0.00 3.16
2116 2224 6.477669 CGTATTTCCTCGCTGATAGTAGTA 57.522 41.667 0.00 0.00 0.00 1.82
2128 2236 0.458889 TTGGTCCGCGTATTTCCTCG 60.459 55.000 4.92 0.00 0.00 4.63
2129 2237 1.729284 TTTGGTCCGCGTATTTCCTC 58.271 50.000 4.92 0.00 0.00 3.71
2130 2238 2.188062 TTTTGGTCCGCGTATTTCCT 57.812 45.000 4.92 0.00 0.00 3.36
2131 2239 2.227149 ACTTTTTGGTCCGCGTATTTCC 59.773 45.455 4.92 0.18 0.00 3.13
2132 2240 3.058777 TGACTTTTTGGTCCGCGTATTTC 60.059 43.478 4.92 0.00 35.54 2.17
2133 2241 2.879646 TGACTTTTTGGTCCGCGTATTT 59.120 40.909 4.92 0.00 35.54 1.40
2141 2250 0.741915 TTGGCGTGACTTTTTGGTCC 59.258 50.000 0.00 0.00 35.54 4.46
2143 2252 2.028130 TCATTGGCGTGACTTTTTGGT 58.972 42.857 0.00 0.00 0.00 3.67
2166 2275 3.304559 CAGAAATTTCGCTGGTACGAGAG 59.695 47.826 9.33 5.62 44.00 3.20
2167 2276 3.250744 CAGAAATTTCGCTGGTACGAGA 58.749 45.455 9.33 0.00 44.00 4.04
2225 2336 0.594602 CCATCCACTGCACTGTTGTG 59.405 55.000 0.00 0.00 46.37 3.33
2267 2378 3.056328 GCCCCGAAAGTCCACTGC 61.056 66.667 0.00 0.00 0.00 4.40
2328 2449 8.855110 TGCTGAAATTTTATGACTTGACCTTAA 58.145 29.630 0.00 0.00 0.00 1.85
2344 2465 9.736023 GTTCGATTAATCCTATTGCTGAAATTT 57.264 29.630 9.87 0.00 0.00 1.82
2345 2466 8.070171 CGTTCGATTAATCCTATTGCTGAAATT 58.930 33.333 9.87 0.00 0.00 1.82
2346 2467 7.307989 CCGTTCGATTAATCCTATTGCTGAAAT 60.308 37.037 9.87 0.00 0.00 2.17
2354 2475 4.562963 GGGAGCCGTTCGATTAATCCTATT 60.563 45.833 9.87 0.00 0.00 1.73
2415 2536 2.508300 ACAGGGGCACGTTAGGAATTAT 59.492 45.455 0.00 0.00 0.00 1.28
2418 2539 1.575419 TACAGGGGCACGTTAGGAAT 58.425 50.000 0.00 0.00 0.00 3.01
2422 2543 4.448210 ACATAATTACAGGGGCACGTTAG 58.552 43.478 0.00 0.00 0.00 2.34
2423 2544 4.490899 ACATAATTACAGGGGCACGTTA 57.509 40.909 0.00 0.00 0.00 3.18
2424 2545 3.359695 ACATAATTACAGGGGCACGTT 57.640 42.857 0.00 0.00 0.00 3.99
2425 2546 3.359695 AACATAATTACAGGGGCACGT 57.640 42.857 0.00 0.00 0.00 4.49
2426 2547 3.250040 GCTAACATAATTACAGGGGCACG 59.750 47.826 0.00 0.00 0.00 5.34
2427 2548 4.204012 TGCTAACATAATTACAGGGGCAC 58.796 43.478 0.00 0.00 0.00 5.01
2428 2549 4.511786 TGCTAACATAATTACAGGGGCA 57.488 40.909 0.00 0.00 0.00 5.36
2429 2550 6.001460 TGTATGCTAACATAATTACAGGGGC 58.999 40.000 0.00 0.00 40.42 5.80
2430 2551 8.635765 ATTGTATGCTAACATAATTACAGGGG 57.364 34.615 0.00 0.00 40.42 4.79
2440 2561 9.938280 GATTACCCACTATTGTATGCTAACATA 57.062 33.333 0.00 0.00 37.74 2.29
2441 2562 7.602644 CGATTACCCACTATTGTATGCTAACAT 59.397 37.037 0.00 0.00 40.49 2.71
2442 2563 6.926826 CGATTACCCACTATTGTATGCTAACA 59.073 38.462 0.00 0.00 0.00 2.41
2443 2564 7.149973 TCGATTACCCACTATTGTATGCTAAC 58.850 38.462 0.00 0.00 0.00 2.34
2444 2565 7.292713 TCGATTACCCACTATTGTATGCTAA 57.707 36.000 0.00 0.00 0.00 3.09
2445 2566 6.904463 TCGATTACCCACTATTGTATGCTA 57.096 37.500 0.00 0.00 0.00 3.49
2446 2567 5.801531 TCGATTACCCACTATTGTATGCT 57.198 39.130 0.00 0.00 0.00 3.79
2447 2568 6.398918 AGATCGATTACCCACTATTGTATGC 58.601 40.000 0.00 0.00 0.00 3.14
2448 2569 8.957466 TCTAGATCGATTACCCACTATTGTATG 58.043 37.037 0.00 0.00 0.00 2.39
2449 2570 9.179909 CTCTAGATCGATTACCCACTATTGTAT 57.820 37.037 0.00 0.00 0.00 2.29
2450 2571 8.162085 ACTCTAGATCGATTACCCACTATTGTA 58.838 37.037 0.00 0.00 0.00 2.41
2451 2572 7.005296 ACTCTAGATCGATTACCCACTATTGT 58.995 38.462 0.00 0.00 0.00 2.71
2452 2573 7.309177 CACTCTAGATCGATTACCCACTATTG 58.691 42.308 0.00 0.00 0.00 1.90
2453 2574 6.434652 CCACTCTAGATCGATTACCCACTATT 59.565 42.308 0.00 0.00 0.00 1.73
2454 2575 5.946972 CCACTCTAGATCGATTACCCACTAT 59.053 44.000 0.00 0.00 0.00 2.12
2455 2576 5.314529 CCACTCTAGATCGATTACCCACTA 58.685 45.833 0.00 0.00 0.00 2.74
2456 2577 4.145807 CCACTCTAGATCGATTACCCACT 58.854 47.826 0.00 0.00 0.00 4.00
2457 2578 3.305471 GCCACTCTAGATCGATTACCCAC 60.305 52.174 0.00 0.00 0.00 4.61
2458 2579 2.891580 GCCACTCTAGATCGATTACCCA 59.108 50.000 0.00 0.00 0.00 4.51
2459 2580 3.158676 AGCCACTCTAGATCGATTACCC 58.841 50.000 0.00 0.00 0.00 3.69
2460 2581 4.076394 AGAGCCACTCTAGATCGATTACC 58.924 47.826 0.00 0.00 39.28 2.85
2461 2582 5.291293 GAGAGCCACTCTAGATCGATTAC 57.709 47.826 0.00 0.00 41.35 1.89
2473 2594 3.066203 GCTACTACTTCAGAGAGCCACTC 59.934 52.174 0.91 0.91 45.22 3.51
2474 2595 3.020984 GCTACTACTTCAGAGAGCCACT 58.979 50.000 0.00 0.00 33.36 4.00
2475 2596 3.020984 AGCTACTACTTCAGAGAGCCAC 58.979 50.000 0.00 0.00 37.43 5.01
2476 2597 3.283751 GAGCTACTACTTCAGAGAGCCA 58.716 50.000 0.00 0.00 37.43 4.75
2477 2598 3.283751 TGAGCTACTACTTCAGAGAGCC 58.716 50.000 0.00 0.00 37.43 4.70
2478 2599 5.529430 TGTATGAGCTACTACTTCAGAGAGC 59.471 44.000 6.70 0.00 37.16 4.09
2479 2600 7.497579 TCTTGTATGAGCTACTACTTCAGAGAG 59.502 40.741 6.70 0.00 0.00 3.20
2480 2601 7.339482 TCTTGTATGAGCTACTACTTCAGAGA 58.661 38.462 6.70 0.00 0.00 3.10
2481 2602 7.561021 TCTTGTATGAGCTACTACTTCAGAG 57.439 40.000 6.70 0.00 0.00 3.35
2482 2603 7.013750 CCATCTTGTATGAGCTACTACTTCAGA 59.986 40.741 6.70 6.02 0.00 3.27
2483 2604 7.013750 TCCATCTTGTATGAGCTACTACTTCAG 59.986 40.741 6.70 2.02 0.00 3.02
2484 2605 6.833933 TCCATCTTGTATGAGCTACTACTTCA 59.166 38.462 6.70 0.00 0.00 3.02
2485 2606 7.278461 TCCATCTTGTATGAGCTACTACTTC 57.722 40.000 6.70 0.00 0.00 3.01
2486 2607 7.847711 ATCCATCTTGTATGAGCTACTACTT 57.152 36.000 6.70 0.00 0.00 2.24
2487 2608 7.847711 AATCCATCTTGTATGAGCTACTACT 57.152 36.000 6.70 0.00 0.00 2.57
2488 2609 8.577296 TGTAATCCATCTTGTATGAGCTACTAC 58.423 37.037 0.00 0.00 0.00 2.73
2489 2610 8.706322 TGTAATCCATCTTGTATGAGCTACTA 57.294 34.615 0.00 0.00 0.00 1.82
2490 2611 7.603180 TGTAATCCATCTTGTATGAGCTACT 57.397 36.000 0.00 0.00 0.00 2.57
2491 2612 7.386299 CCTTGTAATCCATCTTGTATGAGCTAC 59.614 40.741 0.00 0.00 0.00 3.58
2492 2613 7.290014 TCCTTGTAATCCATCTTGTATGAGCTA 59.710 37.037 0.00 0.00 0.00 3.32
2493 2614 6.100279 TCCTTGTAATCCATCTTGTATGAGCT 59.900 38.462 0.00 0.00 0.00 4.09
2494 2615 6.291377 TCCTTGTAATCCATCTTGTATGAGC 58.709 40.000 0.00 0.00 0.00 4.26
2495 2616 6.426328 GCTCCTTGTAATCCATCTTGTATGAG 59.574 42.308 0.00 0.00 0.00 2.90
2496 2617 6.291377 GCTCCTTGTAATCCATCTTGTATGA 58.709 40.000 0.00 0.00 0.00 2.15
2497 2618 5.178252 CGCTCCTTGTAATCCATCTTGTATG 59.822 44.000 0.00 0.00 0.00 2.39
2498 2619 5.070446 TCGCTCCTTGTAATCCATCTTGTAT 59.930 40.000 0.00 0.00 0.00 2.29
2499 2620 4.404394 TCGCTCCTTGTAATCCATCTTGTA 59.596 41.667 0.00 0.00 0.00 2.41
2500 2621 3.197766 TCGCTCCTTGTAATCCATCTTGT 59.802 43.478 0.00 0.00 0.00 3.16
2501 2622 3.797039 TCGCTCCTTGTAATCCATCTTG 58.203 45.455 0.00 0.00 0.00 3.02
2502 2623 4.696479 ATCGCTCCTTGTAATCCATCTT 57.304 40.909 0.00 0.00 0.00 2.40
2503 2624 4.384056 CAATCGCTCCTTGTAATCCATCT 58.616 43.478 0.00 0.00 0.00 2.90
2504 2625 3.058639 GCAATCGCTCCTTGTAATCCATC 60.059 47.826 0.00 0.00 34.30 3.51
2505 2626 2.880890 GCAATCGCTCCTTGTAATCCAT 59.119 45.455 0.00 0.00 34.30 3.41
2506 2627 2.288666 GCAATCGCTCCTTGTAATCCA 58.711 47.619 0.00 0.00 34.30 3.41
2507 2628 1.604278 GGCAATCGCTCCTTGTAATCC 59.396 52.381 0.00 0.00 38.60 3.01
2508 2629 1.604278 GGGCAATCGCTCCTTGTAATC 59.396 52.381 0.00 0.00 38.60 1.75
2509 2630 1.212935 AGGGCAATCGCTCCTTGTAAT 59.787 47.619 0.00 0.00 40.75 1.89
2510 2631 0.618458 AGGGCAATCGCTCCTTGTAA 59.382 50.000 0.00 0.00 40.75 2.41
2511 2632 0.178068 GAGGGCAATCGCTCCTTGTA 59.822 55.000 0.00 0.00 40.75 2.41
2512 2633 1.078143 GAGGGCAATCGCTCCTTGT 60.078 57.895 0.00 0.00 40.75 3.16
2513 2634 3.819188 GAGGGCAATCGCTCCTTG 58.181 61.111 0.00 0.00 40.75 3.61
2518 2639 0.819582 CCAATTTGAGGGCAATCGCT 59.180 50.000 0.00 0.00 38.60 4.93
2519 2640 0.532115 ACCAATTTGAGGGCAATCGC 59.468 50.000 0.00 0.00 33.25 4.58
2520 2641 1.818060 TCACCAATTTGAGGGCAATCG 59.182 47.619 0.00 0.00 33.25 3.34
2521 2642 3.511146 TCTTCACCAATTTGAGGGCAATC 59.489 43.478 0.00 0.00 33.25 2.67
2522 2643 3.509442 TCTTCACCAATTTGAGGGCAAT 58.491 40.909 0.00 0.00 33.25 3.56
2523 2644 2.956132 TCTTCACCAATTTGAGGGCAA 58.044 42.857 0.00 0.00 0.00 4.52
2524 2645 2.673775 TCTTCACCAATTTGAGGGCA 57.326 45.000 0.00 0.00 0.00 5.36
2525 2646 4.335400 TTTTCTTCACCAATTTGAGGGC 57.665 40.909 0.00 0.00 0.00 5.19
2526 2647 5.011943 TCCATTTTCTTCACCAATTTGAGGG 59.988 40.000 0.00 0.00 0.00 4.30
2527 2648 6.100404 TCCATTTTCTTCACCAATTTGAGG 57.900 37.500 0.00 0.00 0.00 3.86
2528 2649 6.647895 CCTTCCATTTTCTTCACCAATTTGAG 59.352 38.462 0.00 0.00 0.00 3.02
2529 2650 6.464180 CCCTTCCATTTTCTTCACCAATTTGA 60.464 38.462 0.00 0.00 0.00 2.69
2530 2651 5.702209 CCCTTCCATTTTCTTCACCAATTTG 59.298 40.000 0.00 0.00 0.00 2.32
2531 2652 5.221904 CCCCTTCCATTTTCTTCACCAATTT 60.222 40.000 0.00 0.00 0.00 1.82
2532 2653 4.286808 CCCCTTCCATTTTCTTCACCAATT 59.713 41.667 0.00 0.00 0.00 2.32
2533 2654 3.840078 CCCCTTCCATTTTCTTCACCAAT 59.160 43.478 0.00 0.00 0.00 3.16
2534 2655 3.116939 TCCCCTTCCATTTTCTTCACCAA 60.117 43.478 0.00 0.00 0.00 3.67
2535 2656 2.448961 TCCCCTTCCATTTTCTTCACCA 59.551 45.455 0.00 0.00 0.00 4.17
2536 2657 3.169512 TCCCCTTCCATTTTCTTCACC 57.830 47.619 0.00 0.00 0.00 4.02
2537 2658 4.588951 ACTTTCCCCTTCCATTTTCTTCAC 59.411 41.667 0.00 0.00 0.00 3.18
2538 2659 4.814967 ACTTTCCCCTTCCATTTTCTTCA 58.185 39.130 0.00 0.00 0.00 3.02
2539 2660 5.105716 GCTACTTTCCCCTTCCATTTTCTTC 60.106 44.000 0.00 0.00 0.00 2.87
2540 2661 4.772624 GCTACTTTCCCCTTCCATTTTCTT 59.227 41.667 0.00 0.00 0.00 2.52
2541 2662 4.202673 TGCTACTTTCCCCTTCCATTTTCT 60.203 41.667 0.00 0.00 0.00 2.52
2542 2663 4.086457 TGCTACTTTCCCCTTCCATTTTC 58.914 43.478 0.00 0.00 0.00 2.29
2543 2664 4.089361 CTGCTACTTTCCCCTTCCATTTT 58.911 43.478 0.00 0.00 0.00 1.82
2544 2665 3.564352 CCTGCTACTTTCCCCTTCCATTT 60.564 47.826 0.00 0.00 0.00 2.32
2545 2666 2.024941 CCTGCTACTTTCCCCTTCCATT 60.025 50.000 0.00 0.00 0.00 3.16
2546 2667 1.566231 CCTGCTACTTTCCCCTTCCAT 59.434 52.381 0.00 0.00 0.00 3.41
2547 2668 0.991920 CCTGCTACTTTCCCCTTCCA 59.008 55.000 0.00 0.00 0.00 3.53
2548 2669 0.992695 ACCTGCTACTTTCCCCTTCC 59.007 55.000 0.00 0.00 0.00 3.46
2549 2670 2.420269 GCTACCTGCTACTTTCCCCTTC 60.420 54.545 0.00 0.00 38.95 3.46
2550 2671 1.560146 GCTACCTGCTACTTTCCCCTT 59.440 52.381 0.00 0.00 38.95 3.95
2551 2672 1.205055 GCTACCTGCTACTTTCCCCT 58.795 55.000 0.00 0.00 38.95 4.79
2552 2673 0.180642 GGCTACCTGCTACTTTCCCC 59.819 60.000 0.00 0.00 42.39 4.81
2553 2674 0.179081 CGGCTACCTGCTACTTTCCC 60.179 60.000 0.00 0.00 42.39 3.97
2554 2675 0.810426 GCGGCTACCTGCTACTTTCC 60.810 60.000 0.00 0.00 42.39 3.13
2555 2676 0.810426 GGCGGCTACCTGCTACTTTC 60.810 60.000 0.00 0.00 42.39 2.62
2556 2677 1.221021 GGCGGCTACCTGCTACTTT 59.779 57.895 0.00 0.00 42.39 2.66
2557 2678 2.901042 GGCGGCTACCTGCTACTT 59.099 61.111 0.00 0.00 42.39 2.24
2558 2679 3.528370 CGGCGGCTACCTGCTACT 61.528 66.667 7.61 0.00 42.39 2.57
2572 2693 3.670377 AGAAAAGGCAACGGCGGC 61.670 61.111 13.24 5.58 46.39 6.53
2573 2694 1.586154 ATCAGAAAAGGCAACGGCGG 61.586 55.000 13.24 0.00 46.39 6.13
2574 2695 0.179189 GATCAGAAAAGGCAACGGCG 60.179 55.000 4.80 4.80 46.39 6.46
2575 2696 0.171231 GGATCAGAAAAGGCAACGGC 59.829 55.000 0.00 0.00 46.39 5.68
2576 2697 1.740025 GAGGATCAGAAAAGGCAACGG 59.260 52.381 0.00 0.00 36.81 4.44
2577 2698 2.704572 AGAGGATCAGAAAAGGCAACG 58.295 47.619 0.00 0.00 39.39 4.10
2578 2699 5.091261 TCTAGAGGATCAGAAAAGGCAAC 57.909 43.478 0.00 0.00 37.82 4.17
2579 2700 5.678583 CATCTAGAGGATCAGAAAAGGCAA 58.321 41.667 0.00 0.00 37.82 4.52
2580 2701 4.444022 GCATCTAGAGGATCAGAAAAGGCA 60.444 45.833 8.95 0.00 37.82 4.75
2581 2702 4.064388 GCATCTAGAGGATCAGAAAAGGC 58.936 47.826 8.95 0.00 37.82 4.35
2582 2703 4.504689 GGGCATCTAGAGGATCAGAAAAGG 60.505 50.000 8.95 0.00 37.82 3.11
2583 2704 4.640364 GGGCATCTAGAGGATCAGAAAAG 58.360 47.826 8.95 0.00 37.82 2.27
2584 2705 3.070159 CGGGCATCTAGAGGATCAGAAAA 59.930 47.826 8.95 0.00 37.82 2.29
2585 2706 2.630098 CGGGCATCTAGAGGATCAGAAA 59.370 50.000 8.95 0.00 37.82 2.52
2586 2707 2.242926 CGGGCATCTAGAGGATCAGAA 58.757 52.381 8.95 0.00 37.82 3.02
2587 2708 1.145945 ACGGGCATCTAGAGGATCAGA 59.854 52.381 8.95 0.00 37.82 3.27
2588 2709 1.543802 GACGGGCATCTAGAGGATCAG 59.456 57.143 8.95 2.95 37.82 2.90
2589 2710 1.145945 AGACGGGCATCTAGAGGATCA 59.854 52.381 8.95 0.00 37.82 2.92
2590 2711 1.816224 GAGACGGGCATCTAGAGGATC 59.184 57.143 8.95 0.00 31.27 3.36
2591 2712 1.884497 CGAGACGGGCATCTAGAGGAT 60.884 57.143 8.95 0.00 34.51 3.24
2592 2713 0.535328 CGAGACGGGCATCTAGAGGA 60.535 60.000 8.95 0.00 0.00 3.71
2593 2714 1.953017 CGAGACGGGCATCTAGAGG 59.047 63.158 0.00 0.00 0.00 3.69
2594 2715 1.169661 AGCGAGACGGGCATCTAGAG 61.170 60.000 0.00 0.00 0.00 2.43
2595 2716 1.152943 AGCGAGACGGGCATCTAGA 60.153 57.895 0.00 0.00 0.00 2.43
2596 2717 1.007964 CAGCGAGACGGGCATCTAG 60.008 63.158 0.00 0.00 0.00 2.43
2597 2718 2.490148 CCAGCGAGACGGGCATCTA 61.490 63.158 0.00 0.00 0.00 1.98
2598 2719 3.842923 CCAGCGAGACGGGCATCT 61.843 66.667 0.00 0.00 0.00 2.90
2612 2733 4.090588 TTAACCTCGGGCGGCCAG 62.091 66.667 29.19 22.13 0.00 4.85
2613 2734 4.090588 CTTAACCTCGGGCGGCCA 62.091 66.667 29.19 14.08 0.00 5.36
2614 2735 2.036428 ATACTTAACCTCGGGCGGCC 62.036 60.000 20.04 20.04 0.00 6.13
2615 2736 0.878961 CATACTTAACCTCGGGCGGC 60.879 60.000 0.00 0.00 0.00 6.53
2616 2737 0.748450 TCATACTTAACCTCGGGCGG 59.252 55.000 0.00 0.00 0.00 6.13
2617 2738 1.868519 GCTCATACTTAACCTCGGGCG 60.869 57.143 0.00 0.00 0.00 6.13
2618 2739 1.540580 GGCTCATACTTAACCTCGGGC 60.541 57.143 0.00 0.00 0.00 6.13
2619 2740 1.760613 TGGCTCATACTTAACCTCGGG 59.239 52.381 0.00 0.00 0.00 5.14
2620 2741 2.803492 GCTGGCTCATACTTAACCTCGG 60.803 54.545 0.00 0.00 0.00 4.63
2621 2742 2.101582 AGCTGGCTCATACTTAACCTCG 59.898 50.000 0.00 0.00 0.00 4.63
2622 2743 3.828875 AGCTGGCTCATACTTAACCTC 57.171 47.619 0.00 0.00 0.00 3.85
2623 2744 3.388350 GGTAGCTGGCTCATACTTAACCT 59.612 47.826 0.00 0.00 0.00 3.50
2624 2745 3.729966 GGTAGCTGGCTCATACTTAACC 58.270 50.000 0.00 0.00 0.00 2.85
2625 2746 3.381949 CGGTAGCTGGCTCATACTTAAC 58.618 50.000 0.00 0.00 0.00 2.01
2626 2747 2.364324 CCGGTAGCTGGCTCATACTTAA 59.636 50.000 0.00 0.00 0.00 1.85
2627 2748 1.961394 CCGGTAGCTGGCTCATACTTA 59.039 52.381 0.00 0.00 0.00 2.24
2628 2749 0.753262 CCGGTAGCTGGCTCATACTT 59.247 55.000 0.00 0.00 0.00 2.24
2629 2750 1.115930 CCCGGTAGCTGGCTCATACT 61.116 60.000 0.00 0.00 0.00 2.12
2630 2751 1.367840 CCCGGTAGCTGGCTCATAC 59.632 63.158 0.00 0.00 0.00 2.39
2631 2752 1.075525 ACCCGGTAGCTGGCTCATA 60.076 57.895 0.00 0.00 0.00 2.15
2632 2753 2.365635 ACCCGGTAGCTGGCTCAT 60.366 61.111 0.00 0.00 0.00 2.90
2633 2754 3.075005 GACCCGGTAGCTGGCTCA 61.075 66.667 0.00 0.00 0.00 4.26
2634 2755 3.851128 GGACCCGGTAGCTGGCTC 61.851 72.222 0.00 0.18 0.00 4.70
2635 2756 4.715130 TGGACCCGGTAGCTGGCT 62.715 66.667 0.00 0.00 0.00 4.75
2636 2757 4.468689 GTGGACCCGGTAGCTGGC 62.469 72.222 0.00 0.00 0.00 4.85
2637 2758 2.683933 AGTGGACCCGGTAGCTGG 60.684 66.667 0.00 0.23 0.00 4.85
2638 2759 2.893398 GAGTGGACCCGGTAGCTG 59.107 66.667 0.00 0.00 0.00 4.24
2639 2760 2.754658 CGAGTGGACCCGGTAGCT 60.755 66.667 0.00 0.00 0.00 3.32
2640 2761 3.061260 GACGAGTGGACCCGGTAGC 62.061 68.421 0.00 0.00 0.00 3.58
2641 2762 1.654954 CTGACGAGTGGACCCGGTAG 61.655 65.000 0.00 0.00 0.00 3.18
2642 2763 1.676635 CTGACGAGTGGACCCGGTA 60.677 63.158 0.00 0.00 0.00 4.02
2643 2764 2.989824 CTGACGAGTGGACCCGGT 60.990 66.667 0.00 0.00 0.00 5.28
2644 2765 4.436998 GCTGACGAGTGGACCCGG 62.437 72.222 0.00 0.00 0.00 5.73
2645 2766 4.778415 CGCTGACGAGTGGACCCG 62.778 72.222 0.00 0.00 43.93 5.28
2651 2772 2.805353 CGAACCCGCTGACGAGTG 60.805 66.667 0.00 0.00 43.93 3.51
2652 2773 4.052229 CCGAACCCGCTGACGAGT 62.052 66.667 0.00 0.00 43.93 4.18
2653 2774 3.966026 GACCGAACCCGCTGACGAG 62.966 68.421 0.00 0.00 43.93 4.18
2654 2775 4.047059 GACCGAACCCGCTGACGA 62.047 66.667 0.00 0.00 43.93 4.20
2695 2816 4.729918 CACCCCACCTGCAGGAGC 62.730 72.222 39.19 0.00 42.57 4.70
2696 2817 4.039092 CCACCCCACCTGCAGGAG 62.039 72.222 39.19 30.44 38.94 3.69
2697 2818 4.918360 ACCACCCCACCTGCAGGA 62.918 66.667 39.19 0.00 38.94 3.86
2698 2819 4.351054 GACCACCCCACCTGCAGG 62.351 72.222 31.60 31.60 42.17 4.85
2699 2820 2.833913 AAGACCACCCCACCTGCAG 61.834 63.158 6.78 6.78 0.00 4.41
2700 2821 2.776526 AAGACCACCCCACCTGCA 60.777 61.111 0.00 0.00 0.00 4.41
2701 2822 2.282462 CAAGACCACCCCACCTGC 60.282 66.667 0.00 0.00 0.00 4.85
2702 2823 2.282462 GCAAGACCACCCCACCTG 60.282 66.667 0.00 0.00 0.00 4.00
2703 2824 3.580319 GGCAAGACCACCCCACCT 61.580 66.667 0.00 0.00 38.86 4.00
2704 2825 3.868200 CTGGCAAGACCACCCCACC 62.868 68.421 0.00 0.00 46.36 4.61
2705 2826 2.282462 CTGGCAAGACCACCCCAC 60.282 66.667 0.00 0.00 46.36 4.61
2706 2827 3.579302 CCTGGCAAGACCACCCCA 61.579 66.667 0.00 0.00 46.36 4.96
2707 2828 4.366684 CCCTGGCAAGACCACCCC 62.367 72.222 0.00 0.00 46.36 4.95
2708 2829 3.256960 TCCCTGGCAAGACCACCC 61.257 66.667 0.00 0.00 46.36 4.61
2709 2830 2.034221 GTCCCTGGCAAGACCACC 59.966 66.667 6.13 0.00 46.36 4.61
2713 2834 2.358737 CACGGTCCCTGGCAAGAC 60.359 66.667 8.45 8.45 0.00 3.01
2714 2835 2.525629 TCACGGTCCCTGGCAAGA 60.526 61.111 0.00 0.00 0.00 3.02
2715 2836 2.358737 GTCACGGTCCCTGGCAAG 60.359 66.667 0.00 0.00 0.00 4.01
2716 2837 2.463589 GATGTCACGGTCCCTGGCAA 62.464 60.000 0.00 0.00 0.00 4.52
2717 2838 2.927856 ATGTCACGGTCCCTGGCA 60.928 61.111 0.00 0.00 0.00 4.92
2718 2839 2.125106 GATGTCACGGTCCCTGGC 60.125 66.667 0.00 0.00 0.00 4.85
2719 2840 2.584608 GGATGTCACGGTCCCTGG 59.415 66.667 0.00 0.00 0.00 4.45
2743 2864 2.694760 GGGCAAGCCTCTTCGCAAG 61.695 63.158 11.40 0.00 36.10 4.01
2744 2865 2.672996 GGGCAAGCCTCTTCGCAA 60.673 61.111 11.40 0.00 36.10 4.85
2745 2866 4.722700 GGGGCAAGCCTCTTCGCA 62.723 66.667 11.40 0.00 32.70 5.10
2747 2868 3.567579 TTGGGGGCAAGCCTCTTCG 62.568 63.158 11.34 0.00 36.64 3.79
2748 2869 1.680314 CTTGGGGGCAAGCCTCTTC 60.680 63.158 11.34 0.00 36.64 2.87
2749 2870 2.442413 CTTGGGGGCAAGCCTCTT 59.558 61.111 11.34 0.00 36.64 2.85
2755 2876 2.718073 GCAGATGCTTGGGGGCAAG 61.718 63.158 0.00 0.00 45.68 4.01
2756 2877 2.681064 GCAGATGCTTGGGGGCAA 60.681 61.111 0.00 0.00 45.68 4.52
2759 2880 2.825836 GACGCAGATGCTTGGGGG 60.826 66.667 2.95 0.00 39.32 5.40
2760 2881 2.825836 GGACGCAGATGCTTGGGG 60.826 66.667 2.95 0.00 39.32 4.96
2761 2882 3.197790 CGGACGCAGATGCTTGGG 61.198 66.667 2.95 0.00 39.32 4.12
2762 2883 1.298157 TTTCGGACGCAGATGCTTGG 61.298 55.000 2.95 0.00 39.32 3.61
2763 2884 0.516877 TTTTCGGACGCAGATGCTTG 59.483 50.000 2.95 0.00 39.32 4.01
2764 2885 1.398390 GATTTTCGGACGCAGATGCTT 59.602 47.619 2.95 0.00 39.32 3.91
2765 2886 1.009829 GATTTTCGGACGCAGATGCT 58.990 50.000 2.95 0.00 39.32 3.79
2766 2887 0.315382 CGATTTTCGGACGCAGATGC 60.315 55.000 0.00 0.00 36.00 3.91
2767 2888 1.256376 CTCGATTTTCGGACGCAGATG 59.744 52.381 0.00 0.00 40.88 2.90
2768 2889 1.560923 CTCGATTTTCGGACGCAGAT 58.439 50.000 0.00 0.00 40.88 2.90
2769 2890 1.076533 GCTCGATTTTCGGACGCAGA 61.077 55.000 0.00 0.00 40.88 4.26
2770 2891 1.078759 AGCTCGATTTTCGGACGCAG 61.079 55.000 0.00 0.00 40.88 5.18
2771 2892 0.669318 AAGCTCGATTTTCGGACGCA 60.669 50.000 0.00 0.00 40.88 5.24
2772 2893 0.247301 CAAGCTCGATTTTCGGACGC 60.247 55.000 0.00 0.00 40.88 5.19
2773 2894 0.247301 GCAAGCTCGATTTTCGGACG 60.247 55.000 0.00 0.00 40.88 4.79
2774 2895 0.796312 TGCAAGCTCGATTTTCGGAC 59.204 50.000 0.00 0.00 40.88 4.79
2775 2896 1.078709 CTGCAAGCTCGATTTTCGGA 58.921 50.000 0.00 0.00 40.88 4.55
2776 2897 0.798776 ACTGCAAGCTCGATTTTCGG 59.201 50.000 0.00 0.00 37.85 4.30
2777 2898 2.096268 TGAACTGCAAGCTCGATTTTCG 60.096 45.455 0.00 0.00 38.48 3.46
2778 2899 3.486584 CTGAACTGCAAGCTCGATTTTC 58.513 45.455 0.00 0.00 37.60 2.29
2779 2900 2.351157 GCTGAACTGCAAGCTCGATTTT 60.351 45.455 0.75 0.00 37.60 1.82
2780 2901 1.198637 GCTGAACTGCAAGCTCGATTT 59.801 47.619 0.75 0.00 37.60 2.17
2781 2902 0.801251 GCTGAACTGCAAGCTCGATT 59.199 50.000 0.75 0.00 37.60 3.34
2782 2903 0.036577 AGCTGAACTGCAAGCTCGAT 60.037 50.000 4.77 0.00 37.60 3.59
2783 2904 0.603065 TAGCTGAACTGCAAGCTCGA 59.397 50.000 13.74 0.00 37.60 4.04
2784 2905 0.997932 CTAGCTGAACTGCAAGCTCG 59.002 55.000 13.74 4.68 37.60 5.03
2785 2906 1.338579 ACCTAGCTGAACTGCAAGCTC 60.339 52.381 13.74 0.00 37.60 4.09
2786 2907 0.689623 ACCTAGCTGAACTGCAAGCT 59.310 50.000 14.67 14.67 37.60 3.74
2787 2908 1.082690 GACCTAGCTGAACTGCAAGC 58.917 55.000 0.00 0.00 37.60 4.01
2788 2909 2.758736 AGACCTAGCTGAACTGCAAG 57.241 50.000 0.00 0.00 42.29 4.01
2789 2910 2.289694 GGAAGACCTAGCTGAACTGCAA 60.290 50.000 0.00 0.00 34.99 4.08
2790 2911 1.276421 GGAAGACCTAGCTGAACTGCA 59.724 52.381 0.00 0.00 34.99 4.41
2791 2912 1.406205 GGGAAGACCTAGCTGAACTGC 60.406 57.143 0.00 0.00 35.85 4.40
2792 2913 1.902508 TGGGAAGACCTAGCTGAACTG 59.097 52.381 0.00 0.00 41.11 3.16
2793 2914 2.327325 TGGGAAGACCTAGCTGAACT 57.673 50.000 0.00 0.00 41.11 3.01
2794 2915 2.303311 ACTTGGGAAGACCTAGCTGAAC 59.697 50.000 0.00 0.00 44.75 3.18
2795 2916 2.621070 ACTTGGGAAGACCTAGCTGAA 58.379 47.619 0.00 0.00 44.75 3.02
2796 2917 2.327325 ACTTGGGAAGACCTAGCTGA 57.673 50.000 0.00 0.00 44.75 4.26
2797 2918 3.964031 AGATACTTGGGAAGACCTAGCTG 59.036 47.826 0.00 0.00 44.75 4.24
2798 2919 4.273300 AGATACTTGGGAAGACCTAGCT 57.727 45.455 0.00 0.00 44.75 3.32
2799 2920 4.500035 CGAAGATACTTGGGAAGACCTAGC 60.500 50.000 0.00 0.00 44.75 3.42
2800 2921 4.888239 TCGAAGATACTTGGGAAGACCTAG 59.112 45.833 0.00 0.00 46.09 3.02
2801 2922 4.643784 GTCGAAGATACTTGGGAAGACCTA 59.356 45.833 0.00 0.00 40.67 3.08
2802 2923 3.447944 GTCGAAGATACTTGGGAAGACCT 59.552 47.826 0.00 0.00 40.67 3.85
2803 2924 3.194968 TGTCGAAGATACTTGGGAAGACC 59.805 47.826 0.00 0.00 40.67 3.85
2804 2925 4.451629 TGTCGAAGATACTTGGGAAGAC 57.548 45.455 0.00 0.00 40.67 3.01
2805 2926 4.527038 AGTTGTCGAAGATACTTGGGAAGA 59.473 41.667 0.00 0.00 40.67 2.87
2806 2927 4.822026 AGTTGTCGAAGATACTTGGGAAG 58.178 43.478 0.00 0.00 40.67 3.46
2807 2928 4.884668 AGTTGTCGAAGATACTTGGGAA 57.115 40.909 0.00 0.00 40.67 3.97
2808 2929 4.282449 TGAAGTTGTCGAAGATACTTGGGA 59.718 41.667 7.25 0.00 41.80 4.37
2809 2930 4.566004 TGAAGTTGTCGAAGATACTTGGG 58.434 43.478 7.25 0.00 41.80 4.12
2810 2931 5.063944 CCATGAAGTTGTCGAAGATACTTGG 59.936 44.000 0.00 0.00 41.80 3.61
2811 2932 5.639506 ACCATGAAGTTGTCGAAGATACTTG 59.360 40.000 0.00 0.00 41.80 3.16
2812 2933 5.794894 ACCATGAAGTTGTCGAAGATACTT 58.205 37.500 0.00 0.00 43.47 2.24
2813 2934 5.407407 ACCATGAAGTTGTCGAAGATACT 57.593 39.130 0.00 0.00 40.67 2.12
2814 2935 7.009357 GTCTAACCATGAAGTTGTCGAAGATAC 59.991 40.741 0.00 0.00 40.67 2.24
2815 2936 7.033791 GTCTAACCATGAAGTTGTCGAAGATA 58.966 38.462 0.00 0.00 40.67 1.98
2816 2937 5.869888 GTCTAACCATGAAGTTGTCGAAGAT 59.130 40.000 0.00 0.00 40.67 2.40
2817 2938 5.227908 GTCTAACCATGAAGTTGTCGAAGA 58.772 41.667 0.00 0.00 0.00 2.87
2818 2939 4.389077 GGTCTAACCATGAAGTTGTCGAAG 59.611 45.833 0.00 0.00 38.42 3.79
2819 2940 4.202274 TGGTCTAACCATGAAGTTGTCGAA 60.202 41.667 0.00 0.00 44.79 3.71
2820 2941 3.322541 TGGTCTAACCATGAAGTTGTCGA 59.677 43.478 0.00 0.00 44.79 4.20
2821 2942 3.659786 TGGTCTAACCATGAAGTTGTCG 58.340 45.455 0.00 0.00 44.79 4.35
2830 2951 7.748795 GGACTCATCCGATGGTCTAACCATG 62.749 52.000 16.05 8.49 46.70 3.66
2832 2953 4.504950 GGACTCATCCGATGGTCTAACCA 61.505 52.174 20.31 0.50 43.88 3.67
2833 2954 2.036089 GGACTCATCCGATGGTCTAACC 59.964 54.545 20.31 8.62 35.19 2.85
2834 2955 3.372660 GGACTCATCCGATGGTCTAAC 57.627 52.381 20.31 8.35 34.48 2.34
2845 2966 0.316841 GATCGAGCAGGGACTCATCC 59.683 60.000 0.00 0.00 45.42 3.51
2846 2967 1.035923 TGATCGAGCAGGGACTCATC 58.964 55.000 0.00 0.00 34.60 2.92
2847 2968 1.343789 CATGATCGAGCAGGGACTCAT 59.656 52.381 10.08 0.00 34.60 2.90
2848 2969 0.749049 CATGATCGAGCAGGGACTCA 59.251 55.000 10.08 0.00 34.60 3.41
2849 2970 0.599728 GCATGATCGAGCAGGGACTC 60.600 60.000 17.69 0.00 34.60 3.36
2850 2971 1.047596 AGCATGATCGAGCAGGGACT 61.048 55.000 17.69 3.48 43.88 3.85
2851 2972 0.599728 GAGCATGATCGAGCAGGGAC 60.600 60.000 17.69 0.90 0.00 4.46
2852 2973 1.744639 GAGCATGATCGAGCAGGGA 59.255 57.895 17.69 0.00 0.00 4.20
2853 2974 1.301558 GGAGCATGATCGAGCAGGG 60.302 63.158 17.69 9.05 0.00 4.45
2854 2975 1.301558 GGGAGCATGATCGAGCAGG 60.302 63.158 11.53 11.53 0.00 4.85
2855 2976 1.664017 CGGGAGCATGATCGAGCAG 60.664 63.158 10.08 2.58 0.00 4.24
2856 2977 2.418777 CGGGAGCATGATCGAGCA 59.581 61.111 5.53 5.53 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.