Multiple sequence alignment - TraesCS6B01G257400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G257400 chr6B 100.000 8916 0 0 1 8916 462023836 462032751 0.000000e+00 16465.0
1 TraesCS6B01G257400 chr6B 95.930 172 6 1 7091 7262 226362480 226362650 2.450000e-70 278.0
2 TraesCS6B01G257400 chr6B 92.742 124 6 3 2073 2195 21321823 21321944 9.200000e-40 176.0
3 TraesCS6B01G257400 chr6B 94.118 85 5 0 4860 4944 675195111 675195027 7.260000e-26 130.0
4 TraesCS6B01G257400 chr6B 98.182 55 1 0 4490 4544 672163667 672163721 7.370000e-16 97.1
5 TraesCS6B01G257400 chr6B 96.078 51 2 0 867 917 123579786 123579836 5.740000e-12 84.2
6 TraesCS6B01G257400 chr6D 92.576 3125 111 40 556 3598 298910979 298914064 0.000000e+00 4373.0
7 TraesCS6B01G257400 chr6D 95.423 1901 58 11 5192 7092 298917974 298919845 0.000000e+00 3001.0
8 TraesCS6B01G257400 chr6D 95.819 1196 34 7 3594 4781 298916765 298917952 0.000000e+00 1917.0
9 TraesCS6B01G257400 chr6D 93.387 862 38 8 7524 8369 298920053 298920911 0.000000e+00 1258.0
10 TraesCS6B01G257400 chr6D 93.154 409 24 4 8509 8914 298921260 298921667 1.660000e-166 597.0
11 TraesCS6B01G257400 chr6D 98.529 204 3 0 7254 7457 298919844 298920047 2.370000e-95 361.0
12 TraesCS6B01G257400 chr6D 90.588 85 8 0 4860 4944 255445413 255445497 7.320000e-21 113.0
13 TraesCS6B01G257400 chr6D 85.047 107 14 2 4842 4948 325727811 325727707 3.400000e-19 108.0
14 TraesCS6B01G257400 chr6D 95.455 66 3 0 4857 4922 413057897 413057962 1.220000e-18 106.0
15 TraesCS6B01G257400 chr6D 87.640 89 11 0 4859 4947 25002331 25002243 4.400000e-18 104.0
16 TraesCS6B01G257400 chr6D 92.754 69 5 0 4793 4861 24554523 24554591 5.700000e-17 100.0
17 TraesCS6B01G257400 chr6D 91.781 73 4 2 4790 4861 91845506 91845435 5.700000e-17 100.0
18 TraesCS6B01G257400 chr6D 87.952 83 10 0 4859 4941 357578321 357578403 2.050000e-16 99.0
19 TraesCS6B01G257400 chr6D 86.813 91 9 3 4856 4944 458853846 458853935 2.050000e-16 99.0
20 TraesCS6B01G257400 chr6D 90.411 73 7 0 4789 4861 30077455 30077383 7.370000e-16 97.1
21 TraesCS6B01G257400 chr6D 87.059 85 11 0 4860 4944 458779108 458779024 7.370000e-16 97.1
22 TraesCS6B01G257400 chr6D 90.141 71 7 0 4791 4861 58042847 58042777 9.530000e-15 93.5
23 TraesCS6B01G257400 chr6D 90.141 71 7 0 4791 4861 61145301 61145371 9.530000e-15 93.5
24 TraesCS6B01G257400 chr6D 89.333 75 6 2 4788 4861 85549822 85549895 9.530000e-15 93.5
25 TraesCS6B01G257400 chr6D 90.278 72 5 2 4791 4861 234424661 234424591 9.530000e-15 93.5
26 TraesCS6B01G257400 chr6D 96.364 55 2 0 4807 4861 24554593 24554539 3.430000e-14 91.6
27 TraesCS6B01G257400 chr6D 91.176 68 2 1 4793 4860 26738821 26738758 1.230000e-13 89.8
28 TraesCS6B01G257400 chr6D 83.838 99 11 5 4849 4947 403970914 403970821 1.230000e-13 89.8
29 TraesCS6B01G257400 chr6D 100.000 32 0 0 8367 8398 298921166 298921197 9.670000e-05 60.2
30 TraesCS6B01G257400 chr6A 97.731 1763 36 3 5330 7092 420829065 420827307 0.000000e+00 3031.0
31 TraesCS6B01G257400 chr6A 93.444 1571 56 13 1196 2744 420833662 420832117 0.000000e+00 2287.0
32 TraesCS6B01G257400 chr6A 96.825 1323 39 3 3897 5218 420830822 420829502 0.000000e+00 2207.0
33 TraesCS6B01G257400 chr6A 96.280 1156 36 6 2744 3898 420832075 420830926 0.000000e+00 1890.0
34 TraesCS6B01G257400 chr6A 92.428 898 41 8 7525 8398 420827098 420826204 0.000000e+00 1256.0
35 TraesCS6B01G257400 chr6A 90.598 585 9 11 556 1094 420834329 420833745 0.000000e+00 734.0
36 TraesCS6B01G257400 chr6A 91.489 282 22 2 8637 8916 420826019 420825738 3.900000e-103 387.0
37 TraesCS6B01G257400 chr6A 97.549 204 5 0 7254 7457 420827308 420827105 5.120000e-92 350.0
38 TraesCS6B01G257400 chr6A 93.333 120 7 1 5216 5335 420829341 420829223 9.200000e-40 176.0
39 TraesCS6B01G257400 chr6A 90.000 130 12 1 2066 2195 179128558 179128686 5.540000e-37 167.0
40 TraesCS6B01G257400 chr6A 94.366 71 4 0 4793 4863 2218245 2218175 9.460000e-20 110.0
41 TraesCS6B01G257400 chr6A 94.286 70 2 2 7444 7513 224620490 224620557 1.220000e-18 106.0
42 TraesCS6B01G257400 chr6A 91.045 67 3 2 4490 4556 132945150 132945213 4.430000e-13 87.9
43 TraesCS6B01G257400 chr3D 85.078 516 59 9 1 514 38384682 38384183 2.220000e-140 510.0
44 TraesCS6B01G257400 chr3D 91.053 190 15 2 7067 7256 84509499 84509686 1.150000e-63 255.0
45 TraesCS6B01G257400 chr3D 91.089 101 8 1 8382 8481 14946989 14946889 1.560000e-27 135.0
46 TraesCS6B01G257400 chr3D 92.391 92 5 2 4856 4945 180838547 180838456 7.260000e-26 130.0
47 TraesCS6B01G257400 chr3D 95.775 71 3 0 4791 4861 565374418 565374348 2.030000e-21 115.0
48 TraesCS6B01G257400 chr3D 98.113 53 0 1 4490 4541 54527535 54527483 3.430000e-14 91.6
49 TraesCS6B01G257400 chr3D 98.000 50 1 0 4490 4539 209683893 209683844 4.430000e-13 87.9
50 TraesCS6B01G257400 chr3D 97.222 36 1 0 4929 4964 57504491 57504456 2.690000e-05 62.1
51 TraesCS6B01G257400 chr3D 100.000 29 0 0 1011 1039 156013359 156013331 4.000000e-03 54.7
52 TraesCS6B01G257400 chr1A 86.323 446 48 7 27 471 99005752 99005319 2.910000e-129 473.0
53 TraesCS6B01G257400 chr1A 94.318 176 8 2 7087 7261 494815583 494815409 1.480000e-67 268.0
54 TraesCS6B01G257400 chr1A 94.309 123 6 1 2073 2195 335028424 335028303 4.250000e-43 187.0
55 TraesCS6B01G257400 chr1A 93.023 86 6 0 4859 4944 436259738 436259653 9.400000e-25 126.0
56 TraesCS6B01G257400 chr1A 91.765 85 7 0 4860 4944 288687142 288687226 1.570000e-22 119.0
57 TraesCS6B01G257400 chr1A 90.805 87 8 0 4858 4944 277633038 277633124 5.660000e-22 117.0
58 TraesCS6B01G257400 chr1A 94.203 69 4 0 4793 4861 49890871 49890803 1.220000e-18 106.0
59 TraesCS6B01G257400 chr1A 90.000 80 5 3 4785 4861 259202165 259202244 5.700000e-17 100.0
60 TraesCS6B01G257400 chr1A 92.188 64 4 1 4490 4553 202099310 202099248 1.230000e-13 89.8
61 TraesCS6B01G257400 chr1A 78.472 144 23 5 2210 2350 3226178 3226040 4.430000e-13 87.9
62 TraesCS6B01G257400 chr1A 98.000 50 1 0 4490 4539 343398692 343398643 4.430000e-13 87.9
63 TraesCS6B01G257400 chr2D 83.591 518 66 13 1 514 579828189 579827687 1.360000e-127 468.0
64 TraesCS6B01G257400 chr2D 95.882 170 6 1 7090 7259 182734019 182733851 3.170000e-69 274.0
65 TraesCS6B01G257400 chr2D 78.235 340 58 12 16 349 69524308 69524637 4.220000e-48 204.0
66 TraesCS6B01G257400 chr2D 75.670 485 71 23 1 471 542962461 542962912 1.960000e-46 198.0
67 TraesCS6B01G257400 chr2D 88.496 113 11 2 8378 8490 500690058 500689948 1.560000e-27 135.0
68 TraesCS6B01G257400 chr2D 92.941 85 6 0 4860 4944 512165840 512165924 3.380000e-24 124.0
69 TraesCS6B01G257400 chr2D 97.059 68 2 0 4793 4860 101695505 101695438 2.030000e-21 115.0
70 TraesCS6B01G257400 chr2D 98.214 56 1 0 4490 4545 480396314 480396369 2.050000e-16 99.0
71 TraesCS6B01G257400 chr2D 93.333 60 3 1 4490 4548 14724364 14724423 4.430000e-13 87.9
72 TraesCS6B01G257400 chr2D 90.000 50 3 2 1097 1145 419675553 419675505 7.470000e-06 63.9
73 TraesCS6B01G257400 chr4A 82.218 523 61 18 1 520 668321240 668320747 1.070000e-113 422.0
74 TraesCS6B01G257400 chr4A 91.339 127 9 1 2071 2195 690884000 690884126 1.190000e-38 172.0
75 TraesCS6B01G257400 chr4A 83.140 172 27 2 4793 4963 95187623 95187453 1.200000e-33 156.0
76 TraesCS6B01G257400 chr4A 96.471 85 3 0 4860 4944 618462174 618462258 3.360000e-29 141.0
77 TraesCS6B01G257400 chr4A 89.423 104 9 2 8378 8481 418604428 418604529 7.260000e-26 130.0
78 TraesCS6B01G257400 chr4A 98.551 69 1 0 4793 4861 626981492 626981560 1.220000e-23 122.0
79 TraesCS6B01G257400 chr1B 81.637 501 67 14 19 518 297311509 297311033 8.390000e-105 392.0
80 TraesCS6B01G257400 chr1B 84.810 316 34 6 28 341 164413447 164413750 1.120000e-78 305.0
81 TraesCS6B01G257400 chr1B 94.792 96 5 0 8388 8483 110607351 110607256 5.580000e-32 150.0
82 TraesCS6B01G257400 chr1B 90.000 80 3 5 7436 7513 302512465 302512541 2.050000e-16 99.0
83 TraesCS6B01G257400 chr1B 97.561 41 1 0 1097 1137 612728367 612728327 4.470000e-08 71.3
84 TraesCS6B01G257400 chr1B 100.000 29 0 0 1011 1039 330730863 330730835 4.000000e-03 54.7
85 TraesCS6B01G257400 chr1D 82.391 460 52 19 1 457 59135710 59135277 3.040000e-99 374.0
86 TraesCS6B01G257400 chr1D 96.970 165 4 1 7091 7255 490423153 490423316 8.820000e-70 276.0
87 TraesCS6B01G257400 chr1D 93.103 87 6 0 4858 4944 216718720 216718806 2.610000e-25 128.0
88 TraesCS6B01G257400 chr1D 97.059 68 2 0 4794 4861 311688920 311688853 2.030000e-21 115.0
89 TraesCS6B01G257400 chr1D 94.366 71 4 0 4793 4863 107217892 107217962 9.460000e-20 110.0
90 TraesCS6B01G257400 chr1D 95.522 67 1 2 7447 7513 407351086 407351150 1.220000e-18 106.0
91 TraesCS6B01G257400 chr1D 92.857 70 5 0 4792 4861 338394563 338394494 1.580000e-17 102.0
92 TraesCS6B01G257400 chr1D 90.541 74 7 0 4788 4861 28194210 28194137 2.050000e-16 99.0
93 TraesCS6B01G257400 chr1D 91.549 71 6 0 4791 4861 453544824 453544894 2.050000e-16 99.0
94 TraesCS6B01G257400 chr1D 91.549 71 6 0 4791 4861 463576614 463576544 2.050000e-16 99.0
95 TraesCS6B01G257400 chr1D 100.000 50 0 0 4490 4539 314437388 314437339 9.530000e-15 93.5
96 TraesCS6B01G257400 chr1D 96.296 54 2 0 4490 4543 121311777 121311724 1.230000e-13 89.8
97 TraesCS6B01G257400 chr1D 96.000 50 2 0 4490 4539 905384 905433 2.060000e-11 82.4
98 TraesCS6B01G257400 chr1D 97.500 40 1 0 4499 4538 82305939 82305900 1.610000e-07 69.4
99 TraesCS6B01G257400 chr1D 100.000 29 0 0 1011 1039 36283279 36283251 4.000000e-03 54.7
100 TraesCS6B01G257400 chr5B 88.192 271 28 3 201 470 697825027 697824760 4.020000e-83 320.0
101 TraesCS6B01G257400 chr5B 96.471 85 3 0 4860 4944 27817306 27817222 3.360000e-29 141.0
102 TraesCS6B01G257400 chr5B 89.189 111 7 3 1159 1266 221785765 221785873 5.620000e-27 134.0
103 TraesCS6B01G257400 chr5B 97.500 40 1 0 1097 1136 305252278 305252317 1.610000e-07 69.4
104 TraesCS6B01G257400 chr5B 90.000 50 5 0 1097 1146 550844904 550844953 2.080000e-06 65.8
105 TraesCS6B01G257400 chr5D 78.916 498 84 9 24 514 45597469 45596986 1.440000e-82 318.0
106 TraesCS6B01G257400 chr5D 94.382 178 9 1 7083 7260 97585830 97586006 1.140000e-68 272.0
107 TraesCS6B01G257400 chr5D 90.323 93 8 1 4857 4948 197147187 197147095 4.370000e-23 121.0
108 TraesCS6B01G257400 chr5D 91.765 85 7 0 4860 4944 542387378 542387294 1.570000e-22 119.0
109 TraesCS6B01G257400 chr5D 95.652 69 3 0 4793 4861 318879332 318879400 2.630000e-20 111.0
110 TraesCS6B01G257400 chr5D 100.000 50 0 0 4490 4539 62177226 62177275 9.530000e-15 93.5
111 TraesCS6B01G257400 chr5D 96.226 53 2 0 4490 4542 251304014 251303962 4.430000e-13 87.9
112 TraesCS6B01G257400 chr5D 100.000 39 0 0 1097 1135 124911748 124911710 1.240000e-08 73.1
113 TraesCS6B01G257400 chr5A 98.204 167 3 0 7091 7257 392799177 392799011 8.760000e-75 292.0
114 TraesCS6B01G257400 chr5A 89.796 98 9 1 4848 4944 59700785 59700882 3.380000e-24 124.0
115 TraesCS6B01G257400 chr5A 95.082 61 3 0 4490 4550 596572769 596572829 7.370000e-16 97.1
116 TraesCS6B01G257400 chr5A 98.148 54 1 0 4490 4543 312227352 312227299 2.650000e-15 95.3
117 TraesCS6B01G257400 chr5A 93.333 45 2 1 1097 1141 635512534 635512577 2.080000e-06 65.8
118 TraesCS6B01G257400 chr4D 78.156 499 82 16 25 514 277444452 277443972 8.760000e-75 292.0
119 TraesCS6B01G257400 chr4D 91.870 123 8 2 2073 2195 57689204 57689324 4.280000e-38 171.0
120 TraesCS6B01G257400 chr4D 93.023 86 6 0 4860 4945 320027052 320026967 9.400000e-25 126.0
121 TraesCS6B01G257400 chr4D 91.667 84 7 0 4855 4938 29830714 29830797 5.660000e-22 117.0
122 TraesCS6B01G257400 chr4D 88.889 90 10 0 4855 4944 312560313 312560224 2.630000e-20 111.0
123 TraesCS6B01G257400 chr4D 76.549 226 35 12 865 1089 296439927 296440135 3.400000e-19 108.0
124 TraesCS6B01G257400 chr4D 90.789 76 6 1 4789 4864 506932681 506932755 5.700000e-17 100.0
125 TraesCS6B01G257400 chr4D 100.000 50 0 0 4490 4539 460994441 460994490 9.530000e-15 93.5
126 TraesCS6B01G257400 chr4D 96.296 54 2 0 4490 4543 421896467 421896520 1.230000e-13 89.8
127 TraesCS6B01G257400 chrUn 96.386 166 6 0 7090 7255 74119450 74119615 3.170000e-69 274.0
128 TraesCS6B01G257400 chrUn 83.065 248 25 5 32 279 301544674 301544904 9.070000e-50 209.0
129 TraesCS6B01G257400 chrUn 89.412 85 8 1 4860 4944 257140464 257140547 1.220000e-18 106.0
130 TraesCS6B01G257400 chrUn 89.412 85 8 1 4860 4944 279873535 279873452 1.220000e-18 106.0
131 TraesCS6B01G257400 chrUn 91.176 68 6 0 4793 4860 110301775 110301842 9.530000e-15 93.5
132 TraesCS6B01G257400 chrUn 95.918 49 2 0 4490 4538 50700457 50700505 7.420000e-11 80.5
133 TraesCS6B01G257400 chrUn 91.379 58 4 1 5940 5997 90333208 90333152 2.670000e-10 78.7
134 TraesCS6B01G257400 chrUn 90.164 61 5 1 5937 5997 288567746 288567805 2.670000e-10 78.7
135 TraesCS6B01G257400 chrUn 85.915 71 10 0 4791 4861 27475953 27476023 9.600000e-10 76.8
136 TraesCS6B01G257400 chrUn 85.915 71 10 0 4791 4861 87109207 87109137 9.600000e-10 76.8
137 TraesCS6B01G257400 chrUn 85.915 71 10 0 4791 4861 369753262 369753192 9.600000e-10 76.8
138 TraesCS6B01G257400 chrUn 82.222 90 10 6 4858 4944 295318218 295318304 1.240000e-08 73.1
139 TraesCS6B01G257400 chrUn 82.222 90 10 6 4858 4944 295323397 295323483 1.240000e-08 73.1
140 TraesCS6B01G257400 chrUn 81.720 93 11 6 4855 4944 364537869 364537780 1.240000e-08 73.1
141 TraesCS6B01G257400 chrUn 81.609 87 12 4 4856 4940 12516643 12516559 1.610000e-07 69.4
142 TraesCS6B01G257400 chrUn 80.000 90 14 4 4857 4944 108256469 108256382 7.470000e-06 63.9
143 TraesCS6B01G257400 chrUn 100.000 33 0 0 4860 4892 75908363 75908331 2.690000e-05 62.1
144 TraesCS6B01G257400 chrUn 100.000 33 0 0 4860 4892 119058263 119058231 2.690000e-05 62.1
145 TraesCS6B01G257400 chrUn 80.000 90 12 6 4858 4944 162568741 162568827 2.690000e-05 62.1
146 TraesCS6B01G257400 chrUn 97.059 34 1 0 4794 4827 266784672 266784705 3.480000e-04 58.4
147 TraesCS6B01G257400 chrUn 100.000 29 0 0 4933 4961 287416733 287416705 4.000000e-03 54.7
148 TraesCS6B01G257400 chrUn 100.000 29 0 0 4933 4961 295023167 295023195 4.000000e-03 54.7
149 TraesCS6B01G257400 chrUn 96.875 32 0 1 4793 4823 35341741 35341710 1.600000e-02 52.8
150 TraesCS6B01G257400 chrUn 96.875 32 0 1 4793 4823 86557217 86557248 1.600000e-02 52.8
151 TraesCS6B01G257400 chr3B 94.286 175 10 0 7087 7261 775481736 775481562 1.480000e-67 268.0
152 TraesCS6B01G257400 chr3B 78.366 453 65 14 19 468 785497495 785497917 6.860000e-66 263.0
153 TraesCS6B01G257400 chr3B 94.309 123 6 1 2073 2195 397669198 397669077 4.250000e-43 187.0
154 TraesCS6B01G257400 chr3B 90.654 107 3 6 4842 4944 474402105 474402002 1.560000e-27 135.0
155 TraesCS6B01G257400 chr3B 98.438 64 0 1 7453 7516 696734036 696733974 2.630000e-20 111.0
156 TraesCS6B01G257400 chr3B 91.935 62 5 0 856 917 628846982 628847043 4.430000e-13 87.9
157 TraesCS6B01G257400 chr2A 92.683 123 7 2 2073 2195 16374653 16374533 9.200000e-40 176.0
158 TraesCS6B01G257400 chr2A 77.778 315 38 19 1159 1470 374160126 374159841 1.990000e-36 165.0
159 TraesCS6B01G257400 chr2A 92.857 98 7 0 8384 8481 686840877 686840780 9.330000e-30 143.0
160 TraesCS6B01G257400 chr2A 89.720 107 7 2 8378 8481 531859085 531858980 5.620000e-27 134.0
161 TraesCS6B01G257400 chr7D 84.302 172 19 8 4793 4960 177106793 177106960 2.580000e-35 161.0
162 TraesCS6B01G257400 chr7D 91.860 86 7 0 4859 4944 103820535 103820620 4.370000e-23 121.0
163 TraesCS6B01G257400 chr7D 95.522 67 1 2 7447 7513 271541867 271541803 1.220000e-18 106.0
164 TraesCS6B01G257400 chr7D 93.056 72 5 0 4790 4861 386508002 386507931 1.220000e-18 106.0
165 TraesCS6B01G257400 chr7D 98.148 54 1 0 4490 4543 611587255 611587308 2.650000e-15 95.3
166 TraesCS6B01G257400 chr4B 75.354 353 65 11 6 349 404563016 404562677 5.580000e-32 150.0
167 TraesCS6B01G257400 chr4B 89.474 95 8 2 4855 4949 22844033 22844125 1.570000e-22 119.0
168 TraesCS6B01G257400 chr4B 95.714 70 3 0 4791 4860 282886978 282886909 7.320000e-21 113.0
169 TraesCS6B01G257400 chr4B 94.366 71 2 2 4793 4861 59598595 59598665 3.400000e-19 108.0
170 TraesCS6B01G257400 chr4B 94.366 71 1 3 7443 7513 527001984 527002051 1.220000e-18 106.0
171 TraesCS6B01G257400 chr4B 93.056 72 3 2 4791 4861 565213375 565213445 4.400000e-18 104.0
172 TraesCS6B01G257400 chr4B 90.000 80 5 3 4784 4861 624442144 624442066 5.700000e-17 100.0
173 TraesCS6B01G257400 chr4B 97.561 41 1 0 1097 1137 392046728 392046688 4.470000e-08 71.3
174 TraesCS6B01G257400 chr4B 93.333 45 2 1 1097 1141 654632616 654632573 2.080000e-06 65.8
175 TraesCS6B01G257400 chr7B 96.512 86 3 0 8396 8481 465162833 465162748 9.330000e-30 143.0
176 TraesCS6B01G257400 chr7B 93.750 96 5 1 8403 8497 482820120 482820025 9.330000e-30 143.0
177 TraesCS6B01G257400 chr7B 94.118 85 5 0 4860 4944 428965929 428965845 7.260000e-26 130.0
178 TraesCS6B01G257400 chr7B 78.771 179 27 8 5 178 174575779 174575951 9.460000e-20 110.0
179 TraesCS6B01G257400 chr7B 95.522 67 1 2 7447 7513 561733995 561733931 1.220000e-18 106.0
180 TraesCS6B01G257400 chr7B 97.500 40 1 0 1097 1136 212580034 212579995 1.610000e-07 69.4
181 TraesCS6B01G257400 chr7B 100.000 29 0 0 1011 1039 224705405 224705433 4.000000e-03 54.7
182 TraesCS6B01G257400 chr7A 91.753 97 8 0 8385 8481 9657477 9657381 1.560000e-27 135.0
183 TraesCS6B01G257400 chr7A 97.015 67 0 2 7448 7513 223679701 223679766 2.630000e-20 111.0
184 TraesCS6B01G257400 chr7A 95.588 68 1 2 7447 7513 238816505 238816439 3.400000e-19 108.0
185 TraesCS6B01G257400 chr3A 93.407 91 5 1 4854 4944 507291579 507291490 5.620000e-27 134.0
186 TraesCS6B01G257400 chr3A 91.667 84 7 0 4778 4861 434000879 434000962 5.660000e-22 117.0
187 TraesCS6B01G257400 chr3A 95.312 64 2 1 4490 4552 80689168 80689105 5.700000e-17 100.0
188 TraesCS6B01G257400 chr2B 82.540 126 19 3 226 349 250761556 250761432 3.400000e-19 108.0
189 TraesCS6B01G257400 chr2B 78.906 128 23 3 60 185 603381439 603381314 5.740000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G257400 chr6B 462023836 462032751 8915 False 16465.000000 16465 100.000000 1 8916 1 chr6B.!!$F4 8915
1 TraesCS6B01G257400 chr6D 298910979 298921667 10688 False 1652.457143 4373 95.555429 556 8914 7 chr6D.!!$F8 8358
2 TraesCS6B01G257400 chr6A 420825738 420834329 8591 True 1368.666667 3031 94.408556 556 8916 9 chr6A.!!$R2 8360
3 TraesCS6B01G257400 chr2D 579827687 579828189 502 True 468.000000 468 83.591000 1 514 1 chr2D.!!$R5 513

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
471 476 0.031178 ACGAGCGAACCGTAAACTGT 59.969 50.000 0.00 0.00 38.61 3.55 F
2052 2147 0.251341 GACAGCCCAACCATCCAACT 60.251 55.000 0.00 0.00 0.00 3.16 F
2453 2548 1.202903 AGTGTCTGGACTGTACGGTCT 60.203 52.381 29.21 9.37 36.55 3.85 F
3283 3424 0.613012 ACCAAAGAGGCCCAGCATTC 60.613 55.000 0.00 0.00 43.14 2.67 F
4377 7329 0.739462 CGCAACGCCTCTCCACATTA 60.739 55.000 0.00 0.00 0.00 1.90 F
5202 8164 0.905357 ACCTGGGTTCGAATCCTCAG 59.095 55.000 27.18 17.38 0.00 3.35 F
5329 8454 4.102649 GACTTGGTTCAAAGGAAAACACG 58.897 43.478 0.00 0.00 34.13 4.49 F
7104 10395 0.460722 GCTTCTACTCCCTCCGTTCC 59.539 60.000 0.00 0.00 0.00 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2447 2542 1.142060 TCACCAAATTGTCCAGACCGT 59.858 47.619 0.00 0.0 0.00 4.83 R
3174 3315 1.001597 CGTATCTCACTTAGGACCCGC 60.002 57.143 0.00 0.0 0.00 6.13 R
4377 7329 1.141657 AGGCCGACATCAGCATTGTAT 59.858 47.619 0.00 0.0 0.00 2.29 R
5077 8039 2.217750 TGTGTTGGTGTGCTACATCAC 58.782 47.619 2.28 0.0 39.25 3.06 R
5586 8875 5.342259 GTGCGATATTGAAAAGTTTGTGTCC 59.658 40.000 0.00 0.0 0.00 4.02 R
6927 10218 0.961019 GAACATCAGCAGCAAACCCA 59.039 50.000 0.00 0.0 0.00 4.51 R
7239 10530 2.617840 TTTCTACTCCCTCCGTTCCT 57.382 50.000 0.00 0.0 0.00 3.36 R
8496 12071 0.521291 ATGTCGTTGAACAATGCCCG 59.479 50.000 0.00 0.0 31.81 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.427245 CGTGCGGGAGAAGGAGGAT 61.427 63.158 0.00 0.00 0.00 3.24
37 38 1.047801 GGAGAAGGAGGATGAGGAGC 58.952 60.000 0.00 0.00 0.00 4.70
42 43 1.145819 GGAGGATGAGGAGCAGCAC 59.854 63.158 0.00 0.00 33.64 4.40
45 46 2.725312 GGATGAGGAGCAGCACCGA 61.725 63.158 2.85 0.00 33.64 4.69
47 48 3.362399 ATGAGGAGCAGCACCGACG 62.362 63.158 2.85 0.00 0.00 5.12
49 50 3.069980 GAGGAGCAGCACCGACGAT 62.070 63.158 2.85 0.00 0.00 3.73
51 52 2.492090 GAGCAGCACCGACGATCT 59.508 61.111 0.00 0.00 0.00 2.75
56 60 1.153745 AGCACCGACGATCTCTTGC 60.154 57.895 0.00 0.38 0.00 4.01
62 66 0.456142 CGACGATCTCTTGCGAACCA 60.456 55.000 0.00 0.00 0.00 3.67
70 74 2.983977 CTTGCGAACCACGACGACG 61.984 63.158 5.58 5.58 45.77 5.12
100 104 4.722535 AGGGGCTCGCCAAGGAGA 62.723 66.667 10.51 0.00 36.08 3.71
110 114 1.021920 GCCAAGGAGAAGGAGTTCGC 61.022 60.000 0.00 0.00 37.79 4.70
120 124 1.595929 GGAGTTCGCCGACAACCAA 60.596 57.895 0.00 0.00 0.00 3.67
127 131 2.325082 GCCGACAACCAAGACGCAT 61.325 57.895 0.00 0.00 0.00 4.73
129 133 1.497278 CGACAACCAAGACGCATGG 59.503 57.895 0.00 0.55 43.84 3.66
151 155 1.593787 CCTGAGAAGAAGGCGCAGA 59.406 57.895 10.83 0.00 35.54 4.26
175 179 2.873472 GACATCTACATCGACCTCGTCT 59.127 50.000 0.00 0.00 40.80 4.18
178 182 0.582482 CTACATCGACCTCGTCTCCG 59.418 60.000 0.00 0.00 40.80 4.63
179 183 0.176449 TACATCGACCTCGTCTCCGA 59.824 55.000 0.00 0.00 41.73 4.55
181 185 1.078637 ATCGACCTCGTCTCCGACA 60.079 57.895 0.00 0.00 38.40 4.35
194 198 3.763319 CGACAACGGCGACTAAGG 58.237 61.111 16.62 0.00 35.72 2.69
195 199 1.210931 CGACAACGGCGACTAAGGA 59.789 57.895 16.62 0.00 35.72 3.36
196 200 0.387622 CGACAACGGCGACTAAGGAA 60.388 55.000 16.62 0.00 35.72 3.36
197 201 1.347320 GACAACGGCGACTAAGGAAG 58.653 55.000 16.62 0.00 0.00 3.46
198 202 0.677842 ACAACGGCGACTAAGGAAGT 59.322 50.000 16.62 0.00 42.80 3.01
199 203 1.888512 ACAACGGCGACTAAGGAAGTA 59.111 47.619 16.62 0.00 39.07 2.24
275 279 2.188062 TTTTGGCTGTAGGGTTACGG 57.812 50.000 0.00 0.00 38.87 4.02
357 362 8.917088 TGATGATCAAGAACTATGTATGACTCA 58.083 33.333 0.00 0.00 0.00 3.41
373 378 7.565029 TGTATGACTCATTCTATTTCTCCTCCA 59.435 37.037 0.00 0.00 0.00 3.86
381 386 7.826252 TCATTCTATTTCTCCTCCAAAGTCTTG 59.174 37.037 0.00 0.00 0.00 3.02
392 397 7.661040 TCCTCCAAAGTCTTGAATTCAAAATC 58.339 34.615 20.82 13.57 35.15 2.17
401 406 8.499162 AGTCTTGAATTCAAAATCTACAGTTCG 58.501 33.333 20.82 5.75 35.15 3.95
406 411 9.611284 TGAATTCAAAATCTACAGTTCGATTTG 57.389 29.630 5.45 0.00 39.18 2.32
415 420 7.223260 TCTACAGTTCGATTTGAGGTTTCTA 57.777 36.000 3.94 0.00 0.00 2.10
418 423 7.745620 ACAGTTCGATTTGAGGTTTCTATTT 57.254 32.000 3.94 0.00 0.00 1.40
438 443 0.816018 TTTCGCGGAGGTTTTCAGCA 60.816 50.000 6.13 0.00 45.87 4.41
440 445 2.556287 GCGGAGGTTTTCAGCACG 59.444 61.111 0.00 0.00 45.05 5.34
449 454 2.602878 GTTTTCAGCACGTATCCGAGA 58.397 47.619 0.00 0.00 37.88 4.04
462 467 2.087009 CCGAGACAACGAGCGAACC 61.087 63.158 0.00 0.00 35.09 3.62
463 468 2.426183 CGAGACAACGAGCGAACCG 61.426 63.158 0.00 0.00 35.09 4.44
471 476 0.031178 ACGAGCGAACCGTAAACTGT 59.969 50.000 0.00 0.00 38.61 3.55
475 480 3.052036 GAGCGAACCGTAAACTGTGTTA 58.948 45.455 0.00 0.00 0.00 2.41
478 483 3.245990 GCGAACCGTAAACTGTGTTAACT 59.754 43.478 7.22 0.00 0.00 2.24
480 485 4.503734 CGAACCGTAAACTGTGTTAACTGA 59.496 41.667 7.22 0.00 0.00 3.41
486 491 2.831685 ACTGTGTTAACTGATCCGCA 57.168 45.000 7.22 0.00 0.00 5.69
489 494 3.684788 ACTGTGTTAACTGATCCGCATTC 59.315 43.478 7.22 0.00 0.00 2.67
490 495 3.006940 TGTGTTAACTGATCCGCATTCC 58.993 45.455 7.22 0.00 0.00 3.01
491 496 2.030457 GTGTTAACTGATCCGCATTCCG 59.970 50.000 7.22 0.00 0.00 4.30
492 497 2.093921 TGTTAACTGATCCGCATTCCGA 60.094 45.455 7.22 0.00 40.02 4.55
493 498 2.509052 TAACTGATCCGCATTCCGAG 57.491 50.000 0.00 0.00 40.02 4.63
494 499 0.824109 AACTGATCCGCATTCCGAGA 59.176 50.000 0.00 0.00 40.02 4.04
495 500 0.387202 ACTGATCCGCATTCCGAGAG 59.613 55.000 0.00 0.00 40.02 3.20
496 501 0.670706 CTGATCCGCATTCCGAGAGA 59.329 55.000 0.00 0.00 40.02 3.10
497 502 1.271934 CTGATCCGCATTCCGAGAGAT 59.728 52.381 0.00 0.00 40.02 2.75
498 503 1.270826 TGATCCGCATTCCGAGAGATC 59.729 52.381 0.00 0.00 40.02 2.75
499 504 1.543802 GATCCGCATTCCGAGAGATCT 59.456 52.381 0.00 0.00 40.02 2.75
500 505 0.670706 TCCGCATTCCGAGAGATCTG 59.329 55.000 0.00 0.00 40.02 2.90
501 506 0.387202 CCGCATTCCGAGAGATCTGT 59.613 55.000 0.00 0.00 40.02 3.41
502 507 1.202463 CCGCATTCCGAGAGATCTGTT 60.202 52.381 0.00 0.00 40.02 3.16
503 508 2.034685 CCGCATTCCGAGAGATCTGTTA 59.965 50.000 0.00 0.00 40.02 2.41
504 509 3.304257 CGCATTCCGAGAGATCTGTTAG 58.696 50.000 0.00 0.00 40.02 2.34
505 510 3.003793 CGCATTCCGAGAGATCTGTTAGA 59.996 47.826 0.00 0.00 40.02 2.10
506 511 4.545610 GCATTCCGAGAGATCTGTTAGAG 58.454 47.826 0.00 0.00 0.00 2.43
507 512 4.277174 GCATTCCGAGAGATCTGTTAGAGA 59.723 45.833 0.00 0.00 34.25 3.10
508 513 5.048083 GCATTCCGAGAGATCTGTTAGAGAT 60.048 44.000 0.00 0.00 44.78 2.75
509 514 6.380995 CATTCCGAGAGATCTGTTAGAGATG 58.619 44.000 0.00 1.53 41.91 2.90
510 515 3.818210 TCCGAGAGATCTGTTAGAGATGC 59.182 47.826 0.00 0.00 41.91 3.91
511 516 3.820467 CCGAGAGATCTGTTAGAGATGCT 59.180 47.826 0.00 0.00 41.91 3.79
512 517 4.083324 CCGAGAGATCTGTTAGAGATGCTC 60.083 50.000 0.00 3.18 41.91 4.26
513 518 4.756642 CGAGAGATCTGTTAGAGATGCTCT 59.243 45.833 15.50 15.50 41.91 4.09
514 519 5.931724 CGAGAGATCTGTTAGAGATGCTCTA 59.068 44.000 15.53 0.22 41.91 2.43
515 520 6.426633 CGAGAGATCTGTTAGAGATGCTCTAA 59.573 42.308 15.53 11.70 46.70 2.10
524 529 4.904253 AGAGATGCTCTAACCTCGTAAC 57.096 45.455 0.00 0.00 39.28 2.50
525 530 4.270834 AGAGATGCTCTAACCTCGTAACA 58.729 43.478 0.00 0.00 39.28 2.41
526 531 4.705507 AGAGATGCTCTAACCTCGTAACAA 59.294 41.667 0.00 0.00 39.28 2.83
527 532 5.185249 AGAGATGCTCTAACCTCGTAACAAA 59.815 40.000 0.00 0.00 39.28 2.83
528 533 5.790593 AGATGCTCTAACCTCGTAACAAAA 58.209 37.500 0.00 0.00 0.00 2.44
529 534 6.228258 AGATGCTCTAACCTCGTAACAAAAA 58.772 36.000 0.00 0.00 0.00 1.94
546 551 3.825143 AAAAAGCAGAACATGTGCCTT 57.175 38.095 0.00 0.00 42.24 4.35
547 552 2.806608 AAAGCAGAACATGTGCCTTG 57.193 45.000 0.00 0.00 42.24 3.61
548 553 1.985473 AAGCAGAACATGTGCCTTGA 58.015 45.000 0.00 0.00 42.24 3.02
549 554 1.985473 AGCAGAACATGTGCCTTGAA 58.015 45.000 0.00 0.00 42.24 2.69
550 555 1.884579 AGCAGAACATGTGCCTTGAAG 59.115 47.619 0.00 0.00 42.24 3.02
551 556 1.068055 GCAGAACATGTGCCTTGAAGG 60.068 52.381 6.92 6.92 38.80 3.46
552 557 2.233271 CAGAACATGTGCCTTGAAGGT 58.767 47.619 13.58 0.00 37.80 3.50
553 558 2.030540 CAGAACATGTGCCTTGAAGGTG 60.031 50.000 13.58 5.56 37.80 4.00
554 559 0.675633 AACATGTGCCTTGAAGGTGC 59.324 50.000 13.58 6.66 37.80 5.01
608 613 0.320771 TCCTTCTCTCAAGCCAACGC 60.321 55.000 0.00 0.00 0.00 4.84
651 666 2.412323 TAGCCATCGCCGTTCGTCT 61.412 57.895 0.00 0.00 39.67 4.18
1102 1153 4.401525 CACATCTGTGCTTTCTTGAGTC 57.598 45.455 0.00 0.00 39.39 3.36
1104 1155 4.454847 CACATCTGTGCTTTCTTGAGTCAT 59.545 41.667 0.00 0.00 39.39 3.06
1105 1156 4.694509 ACATCTGTGCTTTCTTGAGTCATC 59.305 41.667 0.00 0.00 0.00 2.92
1106 1157 4.613925 TCTGTGCTTTCTTGAGTCATCT 57.386 40.909 0.00 0.00 0.00 2.90
1108 1159 6.291648 TCTGTGCTTTCTTGAGTCATCTAT 57.708 37.500 0.00 0.00 0.00 1.98
1109 1160 6.705302 TCTGTGCTTTCTTGAGTCATCTATT 58.295 36.000 0.00 0.00 0.00 1.73
1110 1161 7.164122 TCTGTGCTTTCTTGAGTCATCTATTT 58.836 34.615 0.00 0.00 0.00 1.40
1111 1162 7.663081 TCTGTGCTTTCTTGAGTCATCTATTTT 59.337 33.333 0.00 0.00 0.00 1.82
1113 1164 7.025963 GTGCTTTCTTGAGTCATCTATTTTGG 58.974 38.462 0.00 0.00 0.00 3.28
1114 1165 6.942005 TGCTTTCTTGAGTCATCTATTTTGGA 59.058 34.615 0.00 0.00 0.00 3.53
1115 1166 7.448161 TGCTTTCTTGAGTCATCTATTTTGGAA 59.552 33.333 0.00 0.00 0.00 3.53
1116 1167 7.752686 GCTTTCTTGAGTCATCTATTTTGGAAC 59.247 37.037 0.00 0.00 0.00 3.62
1118 1169 5.874810 TCTTGAGTCATCTATTTTGGAACGG 59.125 40.000 0.00 0.00 0.00 4.44
1120 1171 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
1121 1172 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
1122 1173 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1123 1174 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
1130 1202 2.832643 TGGAACGGAGGGAGTATGTA 57.167 50.000 0.00 0.00 0.00 2.29
1150 1222 6.425577 TGTATTAGTTTAATGTTGGACCGC 57.574 37.500 0.00 0.00 0.00 5.68
1180 1253 6.018016 CGGGGAATTTGGCATTAAAATGAATC 60.018 38.462 6.87 0.00 38.70 2.52
1194 1267 8.579850 TTAAAATGAATCATCTACAAGCTGGT 57.420 30.769 0.00 0.00 0.00 4.00
1239 1312 5.464030 TTCTAGTTTGAACTTAGGCTCGT 57.536 39.130 1.20 0.00 40.37 4.18
1240 1313 5.056894 TCTAGTTTGAACTTAGGCTCGTC 57.943 43.478 1.20 0.00 40.37 4.20
1267 1340 7.279090 TCTCTCTCTCGTACTTCAGTAATTCAG 59.721 40.741 0.00 0.00 31.52 3.02
1297 1370 5.353400 CAGTTGTGCTTCATCATGATGTAGT 59.647 40.000 31.05 15.81 38.15 2.73
1298 1371 5.942236 AGTTGTGCTTCATCATGATGTAGTT 59.058 36.000 31.05 15.05 38.15 2.24
1344 1417 3.191162 GCAGTAATGTCTCATTGGTGCAA 59.809 43.478 17.68 0.00 0.00 4.08
1608 1681 7.609056 TGACACATTTAGTAGGTCTAAGGAAC 58.391 38.462 0.00 0.00 39.42 3.62
1766 1839 7.702348 GGTTCATTACTTCATTTGGTAGATTGC 59.298 37.037 0.00 0.00 0.00 3.56
1876 1949 0.467384 AGCAGATCCCCGTCTGATTG 59.533 55.000 8.01 0.00 46.77 2.67
1943 2016 3.314693 TCAGGGTCTTAAGTTCACCTGT 58.685 45.455 23.48 8.42 44.39 4.00
2052 2147 0.251341 GACAGCCCAACCATCCAACT 60.251 55.000 0.00 0.00 0.00 3.16
2064 2159 6.097270 CCAACCATCCAACTGTATTCATCAAT 59.903 38.462 0.00 0.00 0.00 2.57
2085 2180 4.963276 TTCCGGATGAGTAAATTGCAAG 57.037 40.909 4.15 0.00 0.00 4.01
2128 2223 6.493115 TCCAAGTTATCAATGCTTCAGGAAAA 59.507 34.615 0.00 0.00 0.00 2.29
2172 2267 2.582052 TGGTGGGTGTTTGATGACTTC 58.418 47.619 0.00 0.00 0.00 3.01
2188 2283 2.358898 GACTTCTGCACAATTGTGGTGT 59.641 45.455 33.56 21.20 45.72 4.16
2447 2542 3.644265 TGGCTAAAAGTGTCTGGACTGTA 59.356 43.478 2.38 0.00 0.00 2.74
2453 2548 1.202903 AGTGTCTGGACTGTACGGTCT 60.203 52.381 29.21 9.37 36.55 3.85
2469 2564 2.810400 CGGTCTGGACAATTTGGTGACT 60.810 50.000 0.78 0.00 0.00 3.41
2561 2656 2.224621 ACTTTGGTGAGTGATCAGGTGG 60.225 50.000 0.00 0.00 0.00 4.61
2616 2713 4.487282 AGGGGTATGGTAATGCTCTAGA 57.513 45.455 0.00 0.00 0.00 2.43
2650 2747 6.036844 AGTCGTTCTTGTTCTTGTTTAAGACC 59.963 38.462 0.00 0.00 42.41 3.85
2651 2748 6.036844 GTCGTTCTTGTTCTTGTTTAAGACCT 59.963 38.462 0.00 0.00 42.41 3.85
2762 2902 8.992349 TCTTTGCTATACATATATACATGGGCT 58.008 33.333 0.00 0.00 0.00 5.19
2796 2936 7.148573 CGTAGCTCTAACACACAAAATTGATCT 60.149 37.037 0.00 0.00 0.00 2.75
2799 2939 7.446625 AGCTCTAACACACAAAATTGATCTCTT 59.553 33.333 0.00 0.00 0.00 2.85
2800 2940 8.721478 GCTCTAACACACAAAATTGATCTCTTA 58.279 33.333 0.00 0.00 0.00 2.10
2883 3023 3.256879 AGACCGCACGATCATATCATCTT 59.743 43.478 0.00 0.00 0.00 2.40
3021 3161 4.310788 CACGCATGCACGCACACA 62.311 61.111 19.57 0.00 36.19 3.72
3196 3337 2.290093 CGGGTCCTAAGTGAGATACGAC 59.710 54.545 0.00 0.00 0.00 4.34
3273 3414 1.345741 TCACTCAGCAGACCAAAGAGG 59.654 52.381 0.00 0.00 45.67 3.69
3283 3424 0.613012 ACCAAAGAGGCCCAGCATTC 60.613 55.000 0.00 0.00 43.14 2.67
3399 3540 2.332063 AGCATATAACGTTGCTGGCT 57.668 45.000 11.99 11.88 46.96 4.75
3913 6864 5.392767 TGAACTAGGCTTGAGTAACTCAG 57.607 43.478 2.20 0.00 41.75 3.35
4089 7040 4.225942 AGATTTCTGCATACTCTGGGAACA 59.774 41.667 0.00 0.00 39.59 3.18
4210 7161 5.970640 TCCTTTCTGTTCTACCCCTATCATT 59.029 40.000 0.00 0.00 0.00 2.57
4305 7257 7.700322 TCTCAATTCGTATTATGCTGAGTTC 57.300 36.000 0.00 0.00 0.00 3.01
4377 7329 0.739462 CGCAACGCCTCTCCACATTA 60.739 55.000 0.00 0.00 0.00 1.90
4395 7347 4.214119 ACATTATACAATGCTGATGTCGGC 59.786 41.667 6.87 6.87 44.62 5.54
4402 7354 3.460648 GCTGATGTCGGCCTTTACT 57.539 52.632 0.00 0.00 42.27 2.24
4477 7429 9.791820 TTTGTTTTGCATTCTATGATACTGATG 57.208 29.630 0.00 0.00 0.00 3.07
4555 7507 4.893524 GCTGCCCCCTTACTATTACATTTT 59.106 41.667 0.00 0.00 0.00 1.82
5039 8001 4.043310 TCCACTCCTTGAATGGAATCTTGT 59.957 41.667 0.00 0.00 39.60 3.16
5053 8015 9.533253 AATGGAATCTTGTGTTAAAACTGAAAG 57.467 29.630 0.00 0.00 42.29 2.62
5091 8053 1.914634 CTCTCGTGATGTAGCACACC 58.085 55.000 1.00 0.00 38.69 4.16
5117 8079 2.584492 GCTGGTGCTGAGTTTTGTTT 57.416 45.000 0.00 0.00 36.03 2.83
5202 8164 0.905357 ACCTGGGTTCGAATCCTCAG 59.095 55.000 27.18 17.38 0.00 3.35
5264 8389 4.819630 TCAGCCTTCATTTTACGTGTCTTT 59.180 37.500 0.00 0.00 0.00 2.52
5317 8442 6.877611 GAACCTAATTTCTGACTTGGTTCA 57.122 37.500 14.64 0.00 46.39 3.18
5329 8454 4.102649 GACTTGGTTCAAAGGAAAACACG 58.897 43.478 0.00 0.00 34.13 4.49
5365 8653 7.041440 GGGAAAAACATATGGAACCAAGTTTTG 60.041 37.037 22.57 10.61 38.35 2.44
5545 8834 9.989869 GTTTCTGTAGAGCTTGATTAATTTACC 57.010 33.333 0.00 0.00 0.00 2.85
5586 8875 7.795272 GCTCAAAGCACAAATATTTCAGTTTTG 59.205 33.333 20.75 20.75 41.89 2.44
5617 8906 5.854157 ACTTTTCAATATCGCACTAACACG 58.146 37.500 0.00 0.00 0.00 4.49
5646 8935 6.715264 ACGAGATTTAGGACACAAAATCCTTT 59.285 34.615 0.00 0.00 44.64 3.11
5853 9142 7.094334 GGCAGGTAATAAGCTACTTCTTTTTGT 60.094 37.037 0.00 0.00 0.00 2.83
6105 9394 6.697455 GGTTAAAGTCCTTTTCTTGCTGAAAG 59.303 38.462 0.00 0.00 44.40 2.62
6204 9493 5.358442 GGAGCTGTTGAGTATGAGAACTCTA 59.642 44.000 0.00 0.00 45.12 2.43
6679 9968 6.491745 CAGACAGAGGAGCTATCTTTATACCA 59.508 42.308 0.00 0.00 0.00 3.25
6707 9996 9.793259 TTTCACTATTTCAATTTAGTCCTGACT 57.207 29.630 5.01 5.01 45.02 3.41
6708 9997 8.777865 TCACTATTTCAATTTAGTCCTGACTG 57.222 34.615 10.02 0.00 42.52 3.51
6983 10274 3.453424 ACATTCTTTTTGTTGTTCGGGC 58.547 40.909 0.00 0.00 0.00 6.13
7092 10383 3.177487 GCACAGGTACGTTAGCTTCTAC 58.823 50.000 0.00 0.00 33.57 2.59
7093 10384 3.119566 GCACAGGTACGTTAGCTTCTACT 60.120 47.826 0.00 0.00 33.57 2.57
7094 10385 4.660105 CACAGGTACGTTAGCTTCTACTC 58.340 47.826 0.00 0.00 33.57 2.59
7095 10386 3.693578 ACAGGTACGTTAGCTTCTACTCC 59.306 47.826 0.00 0.00 33.57 3.85
7096 10387 3.066481 CAGGTACGTTAGCTTCTACTCCC 59.934 52.174 0.00 0.00 33.57 4.30
7097 10388 3.053768 AGGTACGTTAGCTTCTACTCCCT 60.054 47.826 0.00 0.00 31.36 4.20
7098 10389 3.314913 GGTACGTTAGCTTCTACTCCCTC 59.685 52.174 0.00 0.00 0.00 4.30
7099 10390 2.377073 ACGTTAGCTTCTACTCCCTCC 58.623 52.381 0.00 0.00 0.00 4.30
7100 10391 1.334243 CGTTAGCTTCTACTCCCTCCG 59.666 57.143 0.00 0.00 0.00 4.63
7101 10392 2.377073 GTTAGCTTCTACTCCCTCCGT 58.623 52.381 0.00 0.00 0.00 4.69
7102 10393 2.759535 GTTAGCTTCTACTCCCTCCGTT 59.240 50.000 0.00 0.00 0.00 4.44
7103 10394 1.476477 AGCTTCTACTCCCTCCGTTC 58.524 55.000 0.00 0.00 0.00 3.95
7104 10395 0.460722 GCTTCTACTCCCTCCGTTCC 59.539 60.000 0.00 0.00 0.00 3.62
7105 10396 1.960953 GCTTCTACTCCCTCCGTTCCT 60.961 57.143 0.00 0.00 0.00 3.36
7106 10397 2.686118 GCTTCTACTCCCTCCGTTCCTA 60.686 54.545 0.00 0.00 0.00 2.94
7107 10398 3.629087 CTTCTACTCCCTCCGTTCCTAA 58.371 50.000 0.00 0.00 0.00 2.69
7108 10399 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
7109 10400 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
7110 10401 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
7111 10402 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
7112 10403 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
7113 10404 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
7114 10405 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
7115 10406 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
7116 10407 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
7117 10408 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
7118 10409 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
7119 10410 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
7120 10411 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
7121 10412 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
7122 10413 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
7123 10414 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
7124 10415 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
7141 10432 9.862371 TCTTTCTAGACATCTCAAATGAACTAC 57.138 33.333 0.00 0.00 0.00 2.73
7142 10433 9.092876 CTTTCTAGACATCTCAAATGAACTACC 57.907 37.037 0.00 0.00 0.00 3.18
7143 10434 7.718334 TCTAGACATCTCAAATGAACTACCA 57.282 36.000 0.00 0.00 0.00 3.25
7144 10435 7.548097 TCTAGACATCTCAAATGAACTACCAC 58.452 38.462 0.00 0.00 0.00 4.16
7145 10436 6.114187 AGACATCTCAAATGAACTACCACA 57.886 37.500 0.00 0.00 0.00 4.17
7146 10437 6.715280 AGACATCTCAAATGAACTACCACAT 58.285 36.000 0.00 0.00 0.00 3.21
7147 10438 7.851228 AGACATCTCAAATGAACTACCACATA 58.149 34.615 0.00 0.00 0.00 2.29
7148 10439 7.766278 AGACATCTCAAATGAACTACCACATAC 59.234 37.037 0.00 0.00 0.00 2.39
7149 10440 7.394016 ACATCTCAAATGAACTACCACATACA 58.606 34.615 0.00 0.00 0.00 2.29
7150 10441 7.550551 ACATCTCAAATGAACTACCACATACAG 59.449 37.037 0.00 0.00 0.00 2.74
7151 10442 7.239763 TCTCAAATGAACTACCACATACAGA 57.760 36.000 0.00 0.00 0.00 3.41
7152 10443 7.851228 TCTCAAATGAACTACCACATACAGAT 58.149 34.615 0.00 0.00 0.00 2.90
7153 10444 7.765819 TCTCAAATGAACTACCACATACAGATG 59.234 37.037 0.00 0.00 39.16 2.90
7155 10446 8.536175 TCAAATGAACTACCACATACAGATGTA 58.464 33.333 0.00 0.00 44.82 2.29
7156 10447 9.330063 CAAATGAACTACCACATACAGATGTAT 57.670 33.333 0.00 0.00 44.82 2.29
7187 10478 9.725019 ACATATTTTGAAGTGTAGATTCACTCA 57.275 29.630 0.00 0.00 46.25 3.41
7192 10483 9.734620 TTTTGAAGTGTAGATTCACTCATTTTG 57.265 29.630 0.00 0.00 46.25 2.44
7193 10484 6.902341 TGAAGTGTAGATTCACTCATTTTGC 58.098 36.000 0.00 0.00 46.25 3.68
7194 10485 6.712095 TGAAGTGTAGATTCACTCATTTTGCT 59.288 34.615 0.00 0.00 46.25 3.91
7195 10486 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
7196 10487 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
7197 10488 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
7198 10489 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
7199 10490 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
7200 10491 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
7201 10492 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
7202 10493 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
7203 10494 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
7204 10495 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
7205 10496 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
7206 10497 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
7207 10498 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
7208 10499 5.670485 TCATTTTGCTCCGTATGTAGTCAT 58.330 37.500 0.00 0.00 38.00 3.06
7209 10500 6.112734 TCATTTTGCTCCGTATGTAGTCATT 58.887 36.000 0.00 0.00 35.70 2.57
7210 10501 6.597672 TCATTTTGCTCCGTATGTAGTCATTT 59.402 34.615 0.00 0.00 35.70 2.32
7211 10502 5.794687 TTTGCTCCGTATGTAGTCATTTG 57.205 39.130 0.00 0.00 35.70 2.32
7212 10503 4.465632 TGCTCCGTATGTAGTCATTTGT 57.534 40.909 0.00 0.00 35.70 2.83
7213 10504 4.827692 TGCTCCGTATGTAGTCATTTGTT 58.172 39.130 0.00 0.00 35.70 2.83
7214 10505 4.629634 TGCTCCGTATGTAGTCATTTGTTG 59.370 41.667 0.00 0.00 35.70 3.33
7215 10506 4.868171 GCTCCGTATGTAGTCATTTGTTGA 59.132 41.667 0.00 0.00 35.70 3.18
7216 10507 5.350365 GCTCCGTATGTAGTCATTTGTTGAA 59.650 40.000 0.00 0.00 35.70 2.69
7217 10508 6.128391 GCTCCGTATGTAGTCATTTGTTGAAA 60.128 38.462 0.00 0.00 35.70 2.69
7218 10509 7.414098 GCTCCGTATGTAGTCATTTGTTGAAAT 60.414 37.037 0.00 0.00 35.70 2.17
7219 10510 7.747888 TCCGTATGTAGTCATTTGTTGAAATG 58.252 34.615 0.00 0.00 46.84 2.32
7220 10511 7.389330 TCCGTATGTAGTCATTTGTTGAAATGT 59.611 33.333 7.25 0.00 45.98 2.71
7221 10512 7.692291 CCGTATGTAGTCATTTGTTGAAATGTC 59.308 37.037 7.25 2.94 45.98 3.06
7222 10513 8.443160 CGTATGTAGTCATTTGTTGAAATGTCT 58.557 33.333 10.61 10.61 45.98 3.41
7225 10516 9.725019 ATGTAGTCATTTGTTGAAATGTCTAGA 57.275 29.630 11.99 11.61 44.10 2.43
7226 10517 9.554395 TGTAGTCATTTGTTGAAATGTCTAGAA 57.446 29.630 11.99 4.88 44.10 2.10
7229 10520 9.342308 AGTCATTTGTTGAAATGTCTAGAAAGA 57.658 29.630 0.00 0.00 45.98 2.52
7230 10521 9.387123 GTCATTTGTTGAAATGTCTAGAAAGAC 57.613 33.333 0.00 0.00 45.98 3.01
7246 10537 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
7247 10538 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
7248 10539 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
7249 10540 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
7250 10541 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
7251 10542 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
7252 10543 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
7253 10544 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
7254 10545 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
7457 10748 8.026607 TGCCATTTTTGCAAAGTAAGATACTAC 58.973 33.333 12.41 0.00 34.70 2.73
7458 10749 8.244113 GCCATTTTTGCAAAGTAAGATACTACT 58.756 33.333 12.41 0.00 38.26 2.57
7459 10750 9.774742 CCATTTTTGCAAAGTAAGATACTACTC 57.225 33.333 12.41 0.00 38.26 2.59
7460 10751 9.774742 CATTTTTGCAAAGTAAGATACTACTCC 57.225 33.333 12.41 0.00 38.26 3.85
7461 10752 7.916914 TTTTGCAAAGTAAGATACTACTCCC 57.083 36.000 12.41 0.00 38.26 4.30
7463 10754 6.466885 TGCAAAGTAAGATACTACTCCCTC 57.533 41.667 0.00 0.00 38.26 4.30
7464 10755 5.363005 TGCAAAGTAAGATACTACTCCCTCC 59.637 44.000 0.00 0.00 38.26 4.30
7465 10756 5.507650 GCAAAGTAAGATACTACTCCCTCCG 60.508 48.000 0.00 0.00 38.26 4.63
7466 10757 5.385628 AAGTAAGATACTACTCCCTCCGT 57.614 43.478 0.00 0.00 38.26 4.69
7467 10758 5.385628 AGTAAGATACTACTCCCTCCGTT 57.614 43.478 0.00 0.00 37.23 4.44
7468 10759 5.375773 AGTAAGATACTACTCCCTCCGTTC 58.624 45.833 0.00 0.00 37.23 3.95
7469 10760 3.226682 AGATACTACTCCCTCCGTTCC 57.773 52.381 0.00 0.00 0.00 3.62
7470 10761 2.512896 AGATACTACTCCCTCCGTTCCA 59.487 50.000 0.00 0.00 0.00 3.53
7471 10762 2.905415 TACTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
7472 10763 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
7473 10764 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
7474 10765 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
7475 10766 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
7476 10767 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
7477 10768 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
7478 10769 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
7479 10770 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
7480 10771 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
7481 10772 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
7482 10773 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
7483 10774 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
7484 10775 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
7485 10776 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
7486 10777 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
7487 10778 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
7488 10779 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
7489 10780 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
7490 10781 7.441836 GTTCCAAAATAGATGACCCAACTTTT 58.558 34.615 0.00 0.00 0.00 2.27
7491 10782 6.991938 TCCAAAATAGATGACCCAACTTTTG 58.008 36.000 0.00 0.00 0.00 2.44
7492 10783 6.553100 TCCAAAATAGATGACCCAACTTTTGT 59.447 34.615 0.00 0.00 0.00 2.83
7493 10784 7.726291 TCCAAAATAGATGACCCAACTTTTGTA 59.274 33.333 0.00 0.00 0.00 2.41
7494 10785 7.812669 CCAAAATAGATGACCCAACTTTTGTAC 59.187 37.037 0.00 0.00 0.00 2.90
7495 10786 8.576442 CAAAATAGATGACCCAACTTTTGTACT 58.424 33.333 0.00 0.00 0.00 2.73
7496 10787 9.802039 AAAATAGATGACCCAACTTTTGTACTA 57.198 29.630 0.00 0.00 0.00 1.82
7497 10788 9.802039 AAATAGATGACCCAACTTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
7498 10789 8.788325 ATAGATGACCCAACTTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
7499 10790 6.838382 AGATGACCCAACTTTTGTACTAACT 58.162 36.000 0.00 0.00 0.00 2.24
7500 10791 7.287810 AGATGACCCAACTTTTGTACTAACTT 58.712 34.615 0.00 0.00 0.00 2.66
7501 10792 7.778382 AGATGACCCAACTTTTGTACTAACTTT 59.222 33.333 0.00 0.00 0.00 2.66
7502 10793 8.983702 ATGACCCAACTTTTGTACTAACTTTA 57.016 30.769 0.00 0.00 0.00 1.85
7503 10794 8.441312 TGACCCAACTTTTGTACTAACTTTAG 57.559 34.615 0.00 0.00 36.82 1.85
7504 10795 8.048514 TGACCCAACTTTTGTACTAACTTTAGT 58.951 33.333 6.85 6.85 45.39 2.24
7505 10796 9.546428 GACCCAACTTTTGTACTAACTTTAGTA 57.454 33.333 4.98 4.98 43.36 1.82
7548 10839 7.978414 TCTTCTTGTCTATGTCTATGCTTCTTG 59.022 37.037 0.00 0.00 0.00 3.02
7715 11011 3.315191 CGCCATAGGACTTTTTACATGGG 59.685 47.826 0.00 0.00 34.72 4.00
7761 11063 6.754209 TGATGTTTTTGTCATGTGTTTGTACC 59.246 34.615 0.00 0.00 0.00 3.34
8035 11339 4.463891 CCAGGAAATTGGATAGTTGCACTT 59.536 41.667 0.00 0.00 40.87 3.16
8059 11363 8.568732 TTATGTGCAACTTTAGTTTTACAAGC 57.431 30.769 10.76 4.05 35.96 4.01
8120 11424 0.378257 ATAATGGCAAAGCGACGCAG 59.622 50.000 23.70 12.40 0.00 5.18
8145 11449 0.935196 ACGCTCGACAGGAAACAAAC 59.065 50.000 0.00 0.00 0.00 2.93
8148 11453 1.264288 GCTCGACAGGAAACAAACCAG 59.736 52.381 0.00 0.00 0.00 4.00
8150 11455 3.202906 CTCGACAGGAAACAAACCAGAA 58.797 45.455 0.00 0.00 0.00 3.02
8193 11499 7.770801 AAGCAAACCTAGTGAAAATCAAAAC 57.229 32.000 0.00 0.00 0.00 2.43
8219 11525 1.905637 ACAAAATCGTCAACCCCCTC 58.094 50.000 0.00 0.00 0.00 4.30
8220 11526 1.144093 ACAAAATCGTCAACCCCCTCA 59.856 47.619 0.00 0.00 0.00 3.86
8224 11530 0.546747 ATCGTCAACCCCCTCAAGGA 60.547 55.000 0.00 0.00 38.24 3.36
8310 11628 0.473755 TTGCTTGGTCTCTCTTGGCA 59.526 50.000 0.00 0.00 0.00 4.92
8322 11640 2.097825 CTCTTGGCAGATTGGAAAGGG 58.902 52.381 0.00 0.00 0.00 3.95
8323 11641 1.428912 TCTTGGCAGATTGGAAAGGGT 59.571 47.619 0.00 0.00 0.00 4.34
8398 11973 6.037391 TGCCAAAGTACACACAAAGTAACTAC 59.963 38.462 0.00 0.00 0.00 2.73
8399 11974 6.259387 GCCAAAGTACACACAAAGTAACTACT 59.741 38.462 0.00 0.00 38.39 2.57
8475 12050 9.490379 AAATGCTCTTATATTAGTTTACGGAGG 57.510 33.333 0.00 0.00 0.00 4.30
8476 12051 6.989659 TGCTCTTATATTAGTTTACGGAGGG 58.010 40.000 0.00 0.00 0.00 4.30
8477 12052 6.779049 TGCTCTTATATTAGTTTACGGAGGGA 59.221 38.462 0.00 0.00 0.00 4.20
8478 12053 7.039923 TGCTCTTATATTAGTTTACGGAGGGAG 60.040 40.741 0.00 0.00 0.00 4.30
8479 12054 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
8480 12055 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
8495 12070 2.193993 GGAGTAGGGTTTAGCCAGGAA 58.806 52.381 0.26 0.00 39.65 3.36
8496 12071 2.093075 GGAGTAGGGTTTAGCCAGGAAC 60.093 54.545 0.26 0.00 39.65 3.62
8508 12083 0.893270 CCAGGAACGGGCATTGTTCA 60.893 55.000 15.30 0.00 45.86 3.18
8545 12155 2.115291 GGAATCTGGCAAGGGACGC 61.115 63.158 0.00 0.00 0.00 5.19
8564 12174 2.928416 CACCCGGAAGAAAGTGGAC 58.072 57.895 0.73 0.00 0.00 4.02
8569 12179 1.291877 CGGAAGAAAGTGGACGGCAG 61.292 60.000 0.00 0.00 0.00 4.85
8626 12236 1.701292 GGGTAAGGTGTTGTACAGGGT 59.299 52.381 0.00 0.00 0.00 4.34
8627 12237 2.289882 GGGTAAGGTGTTGTACAGGGTC 60.290 54.545 0.00 0.00 0.00 4.46
8628 12238 2.611224 GGTAAGGTGTTGTACAGGGTCG 60.611 54.545 0.00 0.00 0.00 4.79
8629 12239 1.125633 AAGGTGTTGTACAGGGTCGT 58.874 50.000 0.00 0.00 0.00 4.34
8631 12241 1.202604 AGGTGTTGTACAGGGTCGTTG 60.203 52.381 0.00 0.00 0.00 4.10
8632 12242 0.584876 GTGTTGTACAGGGTCGTTGC 59.415 55.000 0.00 0.00 0.00 4.17
8633 12243 0.466543 TGTTGTACAGGGTCGTTGCT 59.533 50.000 0.00 0.00 0.00 3.91
8634 12244 0.865769 GTTGTACAGGGTCGTTGCTG 59.134 55.000 0.00 0.00 0.00 4.41
8635 12245 0.466543 TTGTACAGGGTCGTTGCTGT 59.533 50.000 0.00 0.00 0.00 4.40
8666 12305 3.372025 GGCTCTCAAACCCTGGTTGATAT 60.372 47.826 1.58 0.00 38.47 1.63
8709 12348 4.294347 TGGACCCAAATTTTCAAGTTCCT 58.706 39.130 0.00 0.00 0.00 3.36
8710 12349 4.719273 TGGACCCAAATTTTCAAGTTCCTT 59.281 37.500 0.00 0.00 0.00 3.36
8712 12351 5.163353 GGACCCAAATTTTCAAGTTCCTTGA 60.163 40.000 2.65 2.65 46.93 3.02
8760 12400 7.924358 TTAGAGGTATGGCTAAAGGTATTGA 57.076 36.000 0.00 0.00 0.00 2.57
8781 12421 4.163458 TGATGAGGTTAAGCCGTTAAGGAT 59.837 41.667 0.00 0.00 45.00 3.24
8795 12435 2.725221 AAGGATGTCCAGATCAAGCC 57.275 50.000 1.30 0.00 38.89 4.35
8811 12451 1.674322 GCCGAGCTTTGTAGGGCAA 60.674 57.895 0.00 0.00 43.23 4.52
8840 12480 6.039382 GTGTTGAGTTAAGGTGAAGTTGGATT 59.961 38.462 0.00 0.00 0.00 3.01
8885 12525 5.856126 TGTGTCAATAACGAAGGATCAAC 57.144 39.130 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.738099 CTCCTTCTCCCGCACGTTG 60.738 63.158 0.00 0.00 0.00 4.10
11 12 3.382832 CCTCCTTCTCCCGCACGT 61.383 66.667 0.00 0.00 0.00 4.49
14 15 1.001631 TCATCCTCCTTCTCCCGCA 59.998 57.895 0.00 0.00 0.00 5.69
22 23 0.619832 TGCTGCTCCTCATCCTCCTT 60.620 55.000 0.00 0.00 0.00 3.36
30 31 4.056125 CGTCGGTGCTGCTCCTCA 62.056 66.667 17.64 2.56 0.00 3.86
37 38 1.416813 GCAAGAGATCGTCGGTGCTG 61.417 60.000 12.32 0.00 37.82 4.41
92 96 0.391793 GGCGAACTCCTTCTCCTTGG 60.392 60.000 0.00 0.00 29.68 3.61
93 97 0.737715 CGGCGAACTCCTTCTCCTTG 60.738 60.000 0.00 0.00 30.04 3.61
95 99 1.304217 TCGGCGAACTCCTTCTCCT 60.304 57.895 7.35 0.00 30.04 3.69
96 100 1.153804 GTCGGCGAACTCCTTCTCC 60.154 63.158 12.92 0.00 0.00 3.71
97 101 0.038526 TTGTCGGCGAACTCCTTCTC 60.039 55.000 12.92 0.00 0.00 2.87
100 104 1.301479 GGTTGTCGGCGAACTCCTT 60.301 57.895 12.92 0.00 0.00 3.36
110 114 1.497278 CATGCGTCTTGGTTGTCGG 59.503 57.895 0.00 0.00 0.00 4.79
127 131 2.665000 CTTCTTCTCAGGGCGCCA 59.335 61.111 30.85 6.81 0.00 5.69
129 133 2.821810 GCCTTCTTCTCAGGGCGC 60.822 66.667 0.00 0.00 35.08 6.53
134 138 1.074752 GTTCTGCGCCTTCTTCTCAG 58.925 55.000 4.18 0.00 0.00 3.35
135 139 0.667487 CGTTCTGCGCCTTCTTCTCA 60.667 55.000 4.18 0.00 0.00 3.27
151 155 2.031807 CGAGGTCGATGTAGATGTCGTT 59.968 50.000 0.00 0.00 43.02 3.85
178 182 1.336609 ACTTCCTTAGTCGCCGTTGTC 60.337 52.381 0.00 0.00 28.23 3.18
179 183 0.677842 ACTTCCTTAGTCGCCGTTGT 59.322 50.000 0.00 0.00 28.23 3.32
181 185 2.094338 CCTTACTTCCTTAGTCGCCGTT 60.094 50.000 0.00 0.00 38.33 4.44
185 189 4.361420 GACATCCTTACTTCCTTAGTCGC 58.639 47.826 0.00 0.00 38.33 5.19
191 195 1.209747 GGCGGACATCCTTACTTCCTT 59.790 52.381 0.00 0.00 0.00 3.36
192 196 0.831307 GGCGGACATCCTTACTTCCT 59.169 55.000 0.00 0.00 0.00 3.36
193 197 0.529992 CGGCGGACATCCTTACTTCC 60.530 60.000 0.00 0.00 0.00 3.46
194 198 1.152383 GCGGCGGACATCCTTACTTC 61.152 60.000 9.78 0.00 0.00 3.01
195 199 1.153429 GCGGCGGACATCCTTACTT 60.153 57.895 9.78 0.00 0.00 2.24
196 200 2.499685 GCGGCGGACATCCTTACT 59.500 61.111 9.78 0.00 0.00 2.24
197 201 2.588034 GGCGGCGGACATCCTTAC 60.588 66.667 9.78 0.00 0.00 2.34
198 202 4.215742 CGGCGGCGGACATCCTTA 62.216 66.667 25.36 0.00 0.00 2.69
258 262 0.322322 CACCGTAACCCTACAGCCAA 59.678 55.000 0.00 0.00 0.00 4.52
264 268 2.185093 CGGCCACCGTAACCCTAC 59.815 66.667 2.24 0.00 42.73 3.18
275 279 2.113243 CTAAGGGGATAGGCGGCCAC 62.113 65.000 23.09 11.77 0.00 5.01
349 354 8.553085 TTGGAGGAGAAATAGAATGAGTCATA 57.447 34.615 5.94 0.00 0.00 2.15
350 355 7.443302 TTGGAGGAGAAATAGAATGAGTCAT 57.557 36.000 0.00 0.00 0.00 3.06
351 356 6.874278 TTGGAGGAGAAATAGAATGAGTCA 57.126 37.500 0.00 0.00 0.00 3.41
352 357 7.334858 ACTTTGGAGGAGAAATAGAATGAGTC 58.665 38.462 0.00 0.00 0.00 3.36
357 362 7.922382 TCAAGACTTTGGAGGAGAAATAGAAT 58.078 34.615 0.00 0.00 34.97 2.40
369 374 9.617975 GTAGATTTTGAATTCAAGACTTTGGAG 57.382 33.333 19.64 0.00 37.15 3.86
370 375 9.130661 TGTAGATTTTGAATTCAAGACTTTGGA 57.869 29.630 19.64 1.14 37.15 3.53
371 376 9.403110 CTGTAGATTTTGAATTCAAGACTTTGG 57.597 33.333 19.64 6.21 37.15 3.28
381 386 9.825972 TCAAATCGAACTGTAGATTTTGAATTC 57.174 29.630 16.44 0.00 42.41 2.17
392 397 8.480643 AATAGAAACCTCAAATCGAACTGTAG 57.519 34.615 0.00 0.00 0.00 2.74
418 423 0.309612 GCTGAAAACCTCCGCGAAAA 59.690 50.000 8.23 0.00 0.00 2.29
440 445 0.376152 TCGCTCGTTGTCTCGGATAC 59.624 55.000 0.00 0.00 0.00 2.24
449 454 0.854705 GTTTACGGTTCGCTCGTTGT 59.145 50.000 3.25 0.00 41.38 3.32
462 467 4.433805 GCGGATCAGTTAACACAGTTTACG 60.434 45.833 8.61 3.39 0.00 3.18
463 468 4.449743 TGCGGATCAGTTAACACAGTTTAC 59.550 41.667 8.61 0.00 0.00 2.01
471 476 2.093921 TCGGAATGCGGATCAGTTAACA 60.094 45.455 8.61 0.00 0.00 2.41
475 480 0.824109 TCTCGGAATGCGGATCAGTT 59.176 50.000 0.00 0.00 0.00 3.16
478 483 1.270826 GATCTCTCGGAATGCGGATCA 59.729 52.381 6.92 0.00 32.48 2.92
480 485 1.271934 CAGATCTCTCGGAATGCGGAT 59.728 52.381 0.00 0.00 0.00 4.18
486 491 5.048083 GCATCTCTAACAGATCTCTCGGAAT 60.048 44.000 0.00 0.00 40.20 3.01
489 494 3.820467 AGCATCTCTAACAGATCTCTCGG 59.180 47.826 0.00 0.00 40.20 4.63
490 495 5.034554 GAGCATCTCTAACAGATCTCTCG 57.965 47.826 0.00 0.00 40.20 4.04
506 511 6.476243 TTTTTGTTACGAGGTTAGAGCATC 57.524 37.500 0.00 0.00 0.00 3.91
526 531 3.132646 TCAAGGCACATGTTCTGCTTTTT 59.867 39.130 0.00 0.00 32.03 1.94
527 532 2.694628 TCAAGGCACATGTTCTGCTTTT 59.305 40.909 0.00 0.00 32.03 2.27
528 533 2.309613 TCAAGGCACATGTTCTGCTTT 58.690 42.857 0.00 0.00 34.50 3.51
529 534 1.985473 TCAAGGCACATGTTCTGCTT 58.015 45.000 0.00 0.00 34.84 3.91
530 535 1.884579 CTTCAAGGCACATGTTCTGCT 59.115 47.619 0.00 0.00 34.84 4.24
531 536 1.068055 CCTTCAAGGCACATGTTCTGC 60.068 52.381 0.00 0.00 0.00 4.26
532 537 2.030540 CACCTTCAAGGCACATGTTCTG 60.031 50.000 2.20 0.00 39.63 3.02
533 538 2.233271 CACCTTCAAGGCACATGTTCT 58.767 47.619 2.20 0.00 39.63 3.01
534 539 1.336240 GCACCTTCAAGGCACATGTTC 60.336 52.381 2.20 0.00 39.63 3.18
535 540 0.675633 GCACCTTCAAGGCACATGTT 59.324 50.000 2.20 0.00 39.63 2.71
536 541 1.518056 CGCACCTTCAAGGCACATGT 61.518 55.000 2.20 0.00 39.63 3.21
537 542 1.210931 CGCACCTTCAAGGCACATG 59.789 57.895 2.20 0.00 39.63 3.21
538 543 2.629656 GCGCACCTTCAAGGCACAT 61.630 57.895 2.20 0.00 39.63 3.21
539 544 3.286751 GCGCACCTTCAAGGCACA 61.287 61.111 2.20 0.00 39.63 4.57
540 545 3.259425 CTGCGCACCTTCAAGGCAC 62.259 63.158 5.66 0.00 39.63 5.01
541 546 2.979676 CTGCGCACCTTCAAGGCA 60.980 61.111 5.66 0.00 39.63 4.75
542 547 4.410743 GCTGCGCACCTTCAAGGC 62.411 66.667 5.66 1.06 39.63 4.35
543 548 3.741476 GGCTGCGCACCTTCAAGG 61.741 66.667 5.66 0.22 42.49 3.61
544 549 4.093952 CGGCTGCGCACCTTCAAG 62.094 66.667 21.36 6.79 0.00 3.02
545 550 4.927782 ACGGCTGCGCACCTTCAA 62.928 61.111 21.36 0.00 0.00 2.69
576 581 0.250513 AGAAGGAACATGGAGCCGAC 59.749 55.000 0.00 0.00 0.00 4.79
608 613 2.279517 GCGCCTACAGGTGGATCG 60.280 66.667 10.71 0.00 45.52 3.69
651 666 1.440938 CGTTGGCCGTTCAAGTCCAA 61.441 55.000 0.00 0.00 36.35 3.53
1094 1145 5.874810 CCGTTCCAAAATAGATGACTCAAGA 59.125 40.000 0.00 0.00 0.00 3.02
1095 1146 5.874810 TCCGTTCCAAAATAGATGACTCAAG 59.125 40.000 0.00 0.00 0.00 3.02
1096 1147 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
1098 1149 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
1099 1150 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
1100 1151 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
1101 1152 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1102 1153 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
1104 1155 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1105 1156 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1106 1157 4.472108 ACATACTCCCTCCGTTCCAAAATA 59.528 41.667 0.00 0.00 0.00 1.40
1108 1159 2.640826 ACATACTCCCTCCGTTCCAAAA 59.359 45.455 0.00 0.00 0.00 2.44
1109 1160 2.262637 ACATACTCCCTCCGTTCCAAA 58.737 47.619 0.00 0.00 0.00 3.28
1110 1161 1.946984 ACATACTCCCTCCGTTCCAA 58.053 50.000 0.00 0.00 0.00 3.53
1111 1162 2.832643 TACATACTCCCTCCGTTCCA 57.167 50.000 0.00 0.00 0.00 3.53
1113 1164 6.402456 AACTAATACATACTCCCTCCGTTC 57.598 41.667 0.00 0.00 0.00 3.95
1114 1165 6.803366 AAACTAATACATACTCCCTCCGTT 57.197 37.500 0.00 0.00 0.00 4.44
1115 1166 7.902920 TTAAACTAATACATACTCCCTCCGT 57.097 36.000 0.00 0.00 0.00 4.69
1116 1167 8.365647 ACATTAAACTAATACATACTCCCTCCG 58.634 37.037 0.00 0.00 0.00 4.63
1120 1171 9.841295 TCCAACATTAAACTAATACATACTCCC 57.159 33.333 0.00 0.00 0.00 4.30
1123 1174 9.321562 CGGTCCAACATTAAACTAATACATACT 57.678 33.333 0.00 0.00 0.00 2.12
1130 1202 3.697542 GGGCGGTCCAACATTAAACTAAT 59.302 43.478 0.00 0.00 35.00 1.73
1157 1230 7.862512 TGATTCATTTTAATGCCAAATTCCC 57.137 32.000 0.00 0.00 36.36 3.97
1239 1312 4.811969 ACTGAAGTACGAGAGAGAGAGA 57.188 45.455 0.00 0.00 0.00 3.10
1240 1313 7.279090 TGAATTACTGAAGTACGAGAGAGAGAG 59.721 40.741 0.00 0.00 0.00 3.20
1267 1340 2.223548 TGATGAAGCACAACTGCACAAC 60.224 45.455 0.00 0.00 46.97 3.32
1297 1370 3.367607 GTGCACGCACAGTTATTTGAAA 58.632 40.909 17.03 0.00 45.53 2.69
1298 1371 2.993545 GTGCACGCACAGTTATTTGAA 58.006 42.857 17.03 0.00 45.53 2.69
1344 1417 6.093633 GGTTGTATTTCTATCCGTGAGCTTTT 59.906 38.462 0.00 0.00 0.00 2.27
1431 1504 8.168725 ACATATTGGAGGAAAAGATAGATGCAT 58.831 33.333 0.00 0.00 0.00 3.96
1582 1655 7.406031 TCCTTAGACCTACTAAATGTGTCAG 57.594 40.000 0.00 0.00 40.07 3.51
1766 1839 1.173043 TAAAAATGCCCTCACAGCCG 58.827 50.000 0.00 0.00 0.00 5.52
1876 1949 4.283467 GGGTGGGGAATATGATTTAAAGCC 59.717 45.833 0.17 0.00 0.00 4.35
1943 2016 5.826643 ACTTAAAAGGGCATTCCATAGACA 58.173 37.500 0.00 0.00 38.24 3.41
1986 2059 3.803340 AGTGACTTCCCCTTGGAGATAA 58.197 45.455 0.00 0.00 43.07 1.75
1987 2060 3.491766 AGTGACTTCCCCTTGGAGATA 57.508 47.619 0.00 0.00 43.07 1.98
2030 2125 1.307647 GGATGGTTGGGCTGTCCAT 59.692 57.895 0.00 7.37 46.52 3.41
2031 2126 1.724148 TTGGATGGTTGGGCTGTCCA 61.724 55.000 0.00 0.00 45.43 4.02
2052 2147 5.928976 ACTCATCCGGAATTGATGAATACA 58.071 37.500 9.01 0.00 45.78 2.29
2064 2159 4.584874 TCTTGCAATTTACTCATCCGGAA 58.415 39.130 9.01 0.00 0.00 4.30
2085 2180 1.343142 GGACCCAATTGTGGTGGTTTC 59.657 52.381 19.50 7.82 44.30 2.78
2128 2223 3.902881 TGCATGTTTTCTGGTGGTTTT 57.097 38.095 0.00 0.00 0.00 2.43
2198 2293 4.764823 AGTCCGGATTGAGTAAATTGCAAA 59.235 37.500 7.81 0.00 0.00 3.68
2199 2294 4.155826 CAGTCCGGATTGAGTAAATTGCAA 59.844 41.667 21.68 0.00 0.00 4.08
2200 2295 3.689161 CAGTCCGGATTGAGTAAATTGCA 59.311 43.478 21.68 0.00 0.00 4.08
2404 2499 1.378762 CAACCCGGGTCACCAGATT 59.621 57.895 30.40 5.21 36.13 2.40
2407 2502 2.602676 ATCCAACCCGGGTCACCAG 61.603 63.158 30.40 14.15 36.13 4.00
2447 2542 1.142060 TCACCAAATTGTCCAGACCGT 59.858 47.619 0.00 0.00 0.00 4.83
2453 2548 1.234821 GCGAGTCACCAAATTGTCCA 58.765 50.000 0.00 0.00 0.00 4.02
2469 2564 3.936203 AGGGCAACTCCAACGCGA 61.936 61.111 15.93 0.00 36.21 5.87
2561 2656 0.539438 TTCCCTGCCACCATTCACAC 60.539 55.000 0.00 0.00 0.00 3.82
2616 2713 5.903810 AGAACAAGAACGACTAGTCACTTT 58.096 37.500 22.37 11.72 30.90 2.66
2650 2747 3.928727 ATCAAGTGTTGCACAATCCAG 57.071 42.857 2.01 0.00 36.74 3.86
2651 2748 4.397420 AGTATCAAGTGTTGCACAATCCA 58.603 39.130 2.01 0.00 36.74 3.41
2762 2902 1.828595 TGTTAGAGCTACGCCCATGAA 59.171 47.619 0.00 0.00 0.00 2.57
2771 2911 8.034058 AGATCAATTTTGTGTGTTAGAGCTAC 57.966 34.615 0.00 0.00 0.00 3.58
2796 2936 7.125811 AGCTTTGGTGTGATAAGAGGTATAAGA 59.874 37.037 0.00 0.00 0.00 2.10
2799 2939 6.808321 AGCTTTGGTGTGATAAGAGGTATA 57.192 37.500 0.00 0.00 0.00 1.47
2800 2940 5.700402 AGCTTTGGTGTGATAAGAGGTAT 57.300 39.130 0.00 0.00 0.00 2.73
2883 3023 8.642432 AGTAATGAGCTATGTTATGCTTGAGTA 58.358 33.333 0.00 0.00 39.91 2.59
2936 3076 5.190528 TCCTAGAGGAGCAAGAAACAATCAT 59.809 40.000 0.00 0.00 39.78 2.45
3174 3315 1.001597 CGTATCTCACTTAGGACCCGC 60.002 57.143 0.00 0.00 0.00 6.13
3196 3337 4.467198 AAGAACTATAACAGGGTCCACG 57.533 45.455 0.00 0.00 0.00 4.94
3399 3540 5.045213 TGTTGGCCTCACTTGATTAGGATTA 60.045 40.000 3.32 0.00 31.64 1.75
3913 6864 5.537300 TCAGTTGGAGGAATATAGAGCAC 57.463 43.478 0.00 0.00 0.00 4.40
4089 7040 4.286297 TCACGTGATTGAGGGAAAAGAT 57.714 40.909 15.76 0.00 0.00 2.40
4305 7257 1.740585 TCATAAACACGGGAATTGGCG 59.259 47.619 0.00 0.00 0.00 5.69
4377 7329 1.141657 AGGCCGACATCAGCATTGTAT 59.858 47.619 0.00 0.00 0.00 2.29
4395 7347 4.156008 ACCTTATTCGCAAGCAAGTAAAGG 59.844 41.667 0.00 0.00 37.55 3.11
4402 7354 6.346096 AGAGTATAACCTTATTCGCAAGCAA 58.654 36.000 0.00 0.00 37.18 3.91
4466 7418 7.272978 GGTAGTAACAACACCATCAGTATCAT 58.727 38.462 0.00 0.00 32.32 2.45
4476 7428 2.372837 GGGAAGGGTAGTAACAACACCA 59.627 50.000 0.00 0.00 33.78 4.17
4477 7429 2.290514 GGGGAAGGGTAGTAACAACACC 60.291 54.545 0.00 0.00 0.00 4.16
4555 7507 4.398988 CACCTAATGTCATGCTGCCTAAAA 59.601 41.667 0.00 0.00 0.00 1.52
4849 7810 5.360429 GGGACGGAGGGAGTAATATAAGATC 59.640 48.000 0.00 0.00 0.00 2.75
4901 7863 9.065871 CAGTATAAGATGTTTTTGCAAGCTAAC 57.934 33.333 0.00 6.72 0.00 2.34
5035 7997 8.669243 ACTCTCTTCTTTCAGTTTTAACACAAG 58.331 33.333 0.00 0.00 0.00 3.16
5039 8001 9.010029 ACAAACTCTCTTCTTTCAGTTTTAACA 57.990 29.630 0.00 0.00 37.04 2.41
5053 8015 6.885735 GAGAGCTTGATACAAACTCTCTTC 57.114 41.667 24.84 10.23 46.34 2.87
5077 8039 2.217750 TGTGTTGGTGTGCTACATCAC 58.782 47.619 2.28 0.00 39.25 3.06
5117 8079 7.823745 AAAAGAGCTAGTTTTCAAGGAATCA 57.176 32.000 0.00 0.00 0.00 2.57
5202 8164 6.360370 TTGGCATATACATAGAGGAGGAAC 57.640 41.667 0.00 0.00 0.00 3.62
5264 8389 9.810545 CAGTTTTAGGTTAAGTTGAATTTTCCA 57.189 29.630 0.00 0.00 0.00 3.53
5317 8442 7.953752 TCCCAAAATAATACGTGTTTTCCTTT 58.046 30.769 1.91 0.00 0.00 3.11
5380 8669 8.432013 AGATGCTTCCAATCATACTGTTATACA 58.568 33.333 0.00 0.00 0.00 2.29
5571 8860 9.665719 AAGTTTGTGTCCAAAACTGAAATATTT 57.334 25.926 0.00 0.00 41.99 1.40
5582 8871 7.043059 GCGATATTGAAAAGTTTGTGTCCAAAA 60.043 33.333 0.00 0.00 41.99 2.44
5586 8875 5.342259 GTGCGATATTGAAAAGTTTGTGTCC 59.658 40.000 0.00 0.00 0.00 4.02
5617 8906 6.721571 TTTTGTGTCCTAAATCTCGTGATC 57.278 37.500 0.00 0.00 31.51 2.92
6228 9517 9.793259 AGTTCCTCTTCAGATTTGTATTTGTAA 57.207 29.630 0.00 0.00 0.00 2.41
6679 9968 9.793259 TCAGGACTAAATTGAAATAGTGAAAGT 57.207 29.630 0.00 0.00 32.66 2.66
6707 9996 5.044558 TGAAATATAATACGTGCGAGCACA 58.955 37.500 25.18 9.56 46.47 4.57
6708 9997 5.570262 TGAAATATAATACGTGCGAGCAC 57.430 39.130 17.42 17.42 43.01 4.40
6749 10040 9.559732 CAAGATATGGTCATGAATGTAACCTTA 57.440 33.333 0.00 0.00 0.00 2.69
6927 10218 0.961019 GAACATCAGCAGCAAACCCA 59.039 50.000 0.00 0.00 0.00 4.51
6983 10274 5.766702 TTGTATACAAAACGAAGGTAGCG 57.233 39.130 15.92 0.00 32.11 4.26
7092 10383 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
7093 10384 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
7094 10385 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
7095 10386 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
7096 10387 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
7097 10388 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
7098 10389 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
7115 10406 9.862371 GTAGTTCATTTGAGATGTCTAGAAAGA 57.138 33.333 0.00 0.00 0.00 2.52
7116 10407 9.092876 GGTAGTTCATTTGAGATGTCTAGAAAG 57.907 37.037 0.00 0.00 0.00 2.62
7117 10408 8.593679 TGGTAGTTCATTTGAGATGTCTAGAAA 58.406 33.333 0.00 0.00 0.00 2.52
7118 10409 8.035394 GTGGTAGTTCATTTGAGATGTCTAGAA 58.965 37.037 0.00 0.00 0.00 2.10
7119 10410 7.178451 TGTGGTAGTTCATTTGAGATGTCTAGA 59.822 37.037 0.00 0.00 0.00 2.43
7120 10411 7.323420 TGTGGTAGTTCATTTGAGATGTCTAG 58.677 38.462 0.00 0.00 0.00 2.43
7121 10412 7.239763 TGTGGTAGTTCATTTGAGATGTCTA 57.760 36.000 0.00 0.00 0.00 2.59
7122 10413 6.114187 TGTGGTAGTTCATTTGAGATGTCT 57.886 37.500 0.00 0.00 0.00 3.41
7123 10414 6.992063 ATGTGGTAGTTCATTTGAGATGTC 57.008 37.500 0.00 0.00 0.00 3.06
7124 10415 7.394016 TGTATGTGGTAGTTCATTTGAGATGT 58.606 34.615 0.00 0.00 0.00 3.06
7125 10416 7.765819 TCTGTATGTGGTAGTTCATTTGAGATG 59.234 37.037 0.00 0.00 0.00 2.90
7126 10417 7.851228 TCTGTATGTGGTAGTTCATTTGAGAT 58.149 34.615 0.00 0.00 0.00 2.75
7127 10418 7.239763 TCTGTATGTGGTAGTTCATTTGAGA 57.760 36.000 0.00 0.00 0.00 3.27
7128 10419 7.550551 ACATCTGTATGTGGTAGTTCATTTGAG 59.449 37.037 0.00 0.00 44.79 3.02
7129 10420 7.394016 ACATCTGTATGTGGTAGTTCATTTGA 58.606 34.615 0.00 0.00 44.79 2.69
7130 10421 7.615582 ACATCTGTATGTGGTAGTTCATTTG 57.384 36.000 0.00 0.00 44.79 2.32
7173 10464 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
7174 10465 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
7175 10466 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
7176 10467 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
7177 10468 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
7178 10469 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
7179 10470 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
7180 10471 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
7181 10472 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
7182 10473 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
7183 10474 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
7184 10475 5.109210 TGACTACATACGGAGCAAAATGAG 58.891 41.667 0.00 0.00 0.00 2.90
7185 10476 5.079689 TGACTACATACGGAGCAAAATGA 57.920 39.130 0.00 0.00 0.00 2.57
7186 10477 5.991328 ATGACTACATACGGAGCAAAATG 57.009 39.130 0.00 0.00 34.71 2.32
7187 10478 6.374333 ACAAATGACTACATACGGAGCAAAAT 59.626 34.615 0.00 0.00 35.50 1.82
7188 10479 5.703592 ACAAATGACTACATACGGAGCAAAA 59.296 36.000 0.00 0.00 35.50 2.44
7189 10480 5.242434 ACAAATGACTACATACGGAGCAAA 58.758 37.500 0.00 0.00 35.50 3.68
7190 10481 4.827692 ACAAATGACTACATACGGAGCAA 58.172 39.130 0.00 0.00 35.50 3.91
7191 10482 4.465632 ACAAATGACTACATACGGAGCA 57.534 40.909 0.00 0.00 35.50 4.26
7192 10483 4.868171 TCAACAAATGACTACATACGGAGC 59.132 41.667 0.00 0.00 35.50 4.70
7193 10484 6.961359 TTCAACAAATGACTACATACGGAG 57.039 37.500 0.00 0.00 37.92 4.63
7194 10485 7.915293 ATTTCAACAAATGACTACATACGGA 57.085 32.000 0.00 0.00 37.92 4.69
7220 10511 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
7221 10512 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
7222 10513 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
7223 10514 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
7224 10515 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
7225 10516 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
7226 10517 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
7227 10518 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
7228 10519 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
7229 10520 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
7230 10521 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
7231 10522 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
7232 10523 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
7233 10524 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
7234 10525 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
7235 10526 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
7236 10527 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
7237 10528 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
7238 10529 3.744940 TTTCTACTCCCTCCGTTCCTA 57.255 47.619 0.00 0.00 0.00 2.94
7239 10530 2.617840 TTTCTACTCCCTCCGTTCCT 57.382 50.000 0.00 0.00 0.00 3.36
7240 10531 3.908643 AATTTCTACTCCCTCCGTTCC 57.091 47.619 0.00 0.00 0.00 3.62
7241 10532 3.864003 CGAAATTTCTACTCCCTCCGTTC 59.136 47.826 15.92 0.00 0.00 3.95
7242 10533 3.260128 ACGAAATTTCTACTCCCTCCGTT 59.740 43.478 15.92 0.00 0.00 4.44
7243 10534 2.830321 ACGAAATTTCTACTCCCTCCGT 59.170 45.455 15.92 2.83 0.00 4.69
7244 10535 3.187700 CACGAAATTTCTACTCCCTCCG 58.812 50.000 15.92 2.22 0.00 4.63
7245 10536 4.182339 GACACGAAATTTCTACTCCCTCC 58.818 47.826 15.92 0.00 0.00 4.30
7246 10537 4.817517 TGACACGAAATTTCTACTCCCTC 58.182 43.478 15.92 2.34 0.00 4.30
7247 10538 4.884668 TGACACGAAATTTCTACTCCCT 57.115 40.909 15.92 0.00 0.00 4.20
7248 10539 4.995487 AGTTGACACGAAATTTCTACTCCC 59.005 41.667 15.92 1.87 0.00 4.30
7249 10540 6.541111 AAGTTGACACGAAATTTCTACTCC 57.459 37.500 15.92 2.81 0.00 3.85
7251 10542 9.924650 ACTATAAGTTGACACGAAATTTCTACT 57.075 29.630 15.92 1.46 0.00 2.57
7457 10748 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
7458 10749 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
7459 10750 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
7460 10751 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
7461 10752 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
7463 10754 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
7464 10755 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
7465 10756 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
7466 10757 7.070571 ACAAAAGTTGGGTCATCTATTTTGGAA 59.929 33.333 10.98 0.00 32.90 3.53
7467 10758 6.553100 ACAAAAGTTGGGTCATCTATTTTGGA 59.447 34.615 10.98 0.00 32.90 3.53
7468 10759 6.758254 ACAAAAGTTGGGTCATCTATTTTGG 58.242 36.000 10.98 0.00 32.90 3.28
7469 10760 8.576442 AGTACAAAAGTTGGGTCATCTATTTTG 58.424 33.333 0.00 0.00 34.27 2.44
7470 10761 8.706322 AGTACAAAAGTTGGGTCATCTATTTT 57.294 30.769 0.00 0.00 34.12 1.82
7471 10762 9.802039 TTAGTACAAAAGTTGGGTCATCTATTT 57.198 29.630 0.00 0.00 34.12 1.40
7472 10763 9.227777 GTTAGTACAAAAGTTGGGTCATCTATT 57.772 33.333 0.00 0.00 34.12 1.73
7473 10764 8.603304 AGTTAGTACAAAAGTTGGGTCATCTAT 58.397 33.333 0.00 0.00 34.12 1.98
7474 10765 7.970102 AGTTAGTACAAAAGTTGGGTCATCTA 58.030 34.615 0.00 0.00 34.12 1.98
7475 10766 6.838382 AGTTAGTACAAAAGTTGGGTCATCT 58.162 36.000 0.00 0.00 34.12 2.90
7476 10767 7.506328 AAGTTAGTACAAAAGTTGGGTCATC 57.494 36.000 0.00 0.00 34.12 2.92
7477 10768 7.891498 AAAGTTAGTACAAAAGTTGGGTCAT 57.109 32.000 0.00 0.00 34.12 3.06
7478 10769 8.048514 ACTAAAGTTAGTACAAAAGTTGGGTCA 58.951 33.333 1.81 0.00 41.92 4.02
7479 10770 8.442632 ACTAAAGTTAGTACAAAAGTTGGGTC 57.557 34.615 1.81 0.00 41.92 4.46
7516 10807 9.155975 GCATAGACATAGACAAGAAGAAGAAAA 57.844 33.333 0.00 0.00 0.00 2.29
7517 10808 8.535335 AGCATAGACATAGACAAGAAGAAGAAA 58.465 33.333 0.00 0.00 0.00 2.52
7518 10809 8.072321 AGCATAGACATAGACAAGAAGAAGAA 57.928 34.615 0.00 0.00 0.00 2.52
7519 10810 7.652524 AGCATAGACATAGACAAGAAGAAGA 57.347 36.000 0.00 0.00 0.00 2.87
7520 10811 8.196771 AGAAGCATAGACATAGACAAGAAGAAG 58.803 37.037 0.00 0.00 0.00 2.85
7521 10812 8.072321 AGAAGCATAGACATAGACAAGAAGAA 57.928 34.615 0.00 0.00 0.00 2.52
7522 10813 7.652524 AGAAGCATAGACATAGACAAGAAGA 57.347 36.000 0.00 0.00 0.00 2.87
7548 10839 9.072294 CAAATTATTTTGTCGTACCCTGAAATC 57.928 33.333 2.56 0.00 37.92 2.17
7599 10890 2.048877 GACGGGTTCGAAGCGGAA 60.049 61.111 32.84 0.00 40.11 4.30
7735 11032 7.437862 GGTACAAACACATGACAAAAACATCAT 59.562 33.333 0.00 0.00 35.93 2.45
7761 11063 5.754778 AGGAAACGGAATTTTGTTAAGACG 58.245 37.500 0.00 0.00 0.00 4.18
8035 11339 7.860373 CAGCTTGTAAAACTAAAGTTGCACATA 59.140 33.333 9.38 3.29 38.44 2.29
8102 11406 0.672091 TCTGCGTCGCTTTGCCATTA 60.672 50.000 19.50 0.00 0.00 1.90
8120 11424 0.596600 TTCCTGTCGAGCGTGTGTTC 60.597 55.000 0.00 0.00 0.00 3.18
8145 11449 3.132824 ACCTTTGTTTGGCTTTCTTCTGG 59.867 43.478 0.00 0.00 0.00 3.86
8148 11453 5.234329 GCTTTACCTTTGTTTGGCTTTCTTC 59.766 40.000 0.00 0.00 0.00 2.87
8150 11455 4.161377 TGCTTTACCTTTGTTTGGCTTTCT 59.839 37.500 0.00 0.00 0.00 2.52
8310 11628 4.593956 GAATCTGTCACCCTTTCCAATCT 58.406 43.478 0.00 0.00 0.00 2.40
8322 11640 2.613730 TGTCGTCTCGAATCTGTCAC 57.386 50.000 0.00 0.00 37.72 3.67
8323 11641 4.261197 CCATATGTCGTCTCGAATCTGTCA 60.261 45.833 1.24 0.00 37.72 3.58
8449 12024 9.490379 CCTCCGTAAACTAATATAAGAGCATTT 57.510 33.333 0.00 0.00 0.00 2.32
8450 12025 8.095169 CCCTCCGTAAACTAATATAAGAGCATT 58.905 37.037 0.00 0.00 0.00 3.56
8451 12026 7.453752 TCCCTCCGTAAACTAATATAAGAGCAT 59.546 37.037 0.00 0.00 0.00 3.79
8452 12027 6.779049 TCCCTCCGTAAACTAATATAAGAGCA 59.221 38.462 0.00 0.00 0.00 4.26
8453 12028 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
8454 12029 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
8455 12030 9.512588 CTACTCCCTCCGTAAACTAATATAAGA 57.487 37.037 0.00 0.00 0.00 2.10
8456 12031 8.738106 CCTACTCCCTCCGTAAACTAATATAAG 58.262 40.741 0.00 0.00 0.00 1.73
8457 12032 7.671398 CCCTACTCCCTCCGTAAACTAATATAA 59.329 40.741 0.00 0.00 0.00 0.98
8458 12033 7.177878 CCCTACTCCCTCCGTAAACTAATATA 58.822 42.308 0.00 0.00 0.00 0.86
8459 12034 6.015282 CCCTACTCCCTCCGTAAACTAATAT 58.985 44.000 0.00 0.00 0.00 1.28
8460 12035 5.103515 ACCCTACTCCCTCCGTAAACTAATA 60.104 44.000 0.00 0.00 0.00 0.98
8461 12036 4.221530 CCCTACTCCCTCCGTAAACTAAT 58.778 47.826 0.00 0.00 0.00 1.73
8462 12037 3.011708 ACCCTACTCCCTCCGTAAACTAA 59.988 47.826 0.00 0.00 0.00 2.24
8463 12038 2.582636 ACCCTACTCCCTCCGTAAACTA 59.417 50.000 0.00 0.00 0.00 2.24
8464 12039 1.360507 ACCCTACTCCCTCCGTAAACT 59.639 52.381 0.00 0.00 0.00 2.66
8465 12040 1.857965 ACCCTACTCCCTCCGTAAAC 58.142 55.000 0.00 0.00 0.00 2.01
8466 12041 2.629017 AACCCTACTCCCTCCGTAAA 57.371 50.000 0.00 0.00 0.00 2.01
8467 12042 2.629017 AAACCCTACTCCCTCCGTAA 57.371 50.000 0.00 0.00 0.00 3.18
8468 12043 2.687914 GCTAAACCCTACTCCCTCCGTA 60.688 54.545 0.00 0.00 0.00 4.02
8469 12044 1.963857 GCTAAACCCTACTCCCTCCGT 60.964 57.143 0.00 0.00 0.00 4.69
8470 12045 0.751452 GCTAAACCCTACTCCCTCCG 59.249 60.000 0.00 0.00 0.00 4.63
8471 12046 1.129917 GGCTAAACCCTACTCCCTCC 58.870 60.000 0.00 0.00 0.00 4.30
8472 12047 1.763545 CTGGCTAAACCCTACTCCCTC 59.236 57.143 0.00 0.00 37.83 4.30
8473 12048 1.625508 CCTGGCTAAACCCTACTCCCT 60.626 57.143 0.00 0.00 37.83 4.20
8474 12049 0.837940 CCTGGCTAAACCCTACTCCC 59.162 60.000 0.00 0.00 37.83 4.30
8475 12050 1.875488 TCCTGGCTAAACCCTACTCC 58.125 55.000 0.00 0.00 37.83 3.85
8476 12051 2.418334 CGTTCCTGGCTAAACCCTACTC 60.418 54.545 0.00 0.00 37.83 2.59
8477 12052 1.553704 CGTTCCTGGCTAAACCCTACT 59.446 52.381 0.00 0.00 37.83 2.57
8478 12053 1.406477 CCGTTCCTGGCTAAACCCTAC 60.406 57.143 0.00 0.00 37.83 3.18
8479 12054 0.906775 CCGTTCCTGGCTAAACCCTA 59.093 55.000 0.00 0.00 37.83 3.53
8480 12055 1.683441 CCGTTCCTGGCTAAACCCT 59.317 57.895 0.00 0.00 37.83 4.34
8495 12070 0.816018 TGTCGTTGAACAATGCCCGT 60.816 50.000 0.00 0.00 0.00 5.28
8496 12071 0.521291 ATGTCGTTGAACAATGCCCG 59.479 50.000 0.00 0.00 31.81 6.13
8508 12083 2.011947 CCATGCAGATCACATGTCGTT 58.988 47.619 20.82 0.00 42.74 3.85
8545 12155 4.397348 CCACTTTCTTCCGGGTGG 57.603 61.111 10.39 10.39 42.29 4.61
8564 12174 3.634568 TGGAATGTAAACAAACTGCCG 57.365 42.857 0.00 0.00 0.00 5.69
8569 12179 8.558700 AGCAATTGAATTGGAATGTAAACAAAC 58.441 29.630 18.52 0.00 40.57 2.93
8626 12236 1.537348 GCCCGTCATATACAGCAACGA 60.537 52.381 0.00 0.00 35.45 3.85
8627 12237 0.859232 GCCCGTCATATACAGCAACG 59.141 55.000 0.00 0.00 0.00 4.10
8628 12238 2.135933 GAGCCCGTCATATACAGCAAC 58.864 52.381 0.00 0.00 31.02 4.17
8629 12239 2.035961 GAGAGCCCGTCATATACAGCAA 59.964 50.000 0.00 0.00 31.02 3.91
8631 12241 1.613925 TGAGAGCCCGTCATATACAGC 59.386 52.381 0.00 0.00 0.00 4.40
8632 12242 4.051922 GTTTGAGAGCCCGTCATATACAG 58.948 47.826 0.00 0.00 0.00 2.74
8633 12243 3.181469 GGTTTGAGAGCCCGTCATATACA 60.181 47.826 0.00 0.00 0.00 2.29
8634 12244 3.391049 GGTTTGAGAGCCCGTCATATAC 58.609 50.000 0.00 0.00 0.00 1.47
8635 12245 2.367567 GGGTTTGAGAGCCCGTCATATA 59.632 50.000 0.00 0.00 40.14 0.86
8666 12305 2.756760 AGACCGTGGTTTTATCGAGCTA 59.243 45.455 0.00 0.00 0.00 3.32
8709 12348 3.766591 TGCCTCCTTCAAAAAGTTGTCAA 59.233 39.130 0.00 0.00 36.07 3.18
8710 12349 3.360867 TGCCTCCTTCAAAAAGTTGTCA 58.639 40.909 0.00 0.00 36.07 3.58
8712 12351 3.365472 ACTGCCTCCTTCAAAAAGTTGT 58.635 40.909 0.00 0.00 36.07 3.32
8760 12400 4.080526 ACATCCTTAACGGCTTAACCTCAT 60.081 41.667 0.00 0.00 35.61 2.90
8781 12421 1.219124 GCTCGGCTTGATCTGGACA 59.781 57.895 0.00 0.00 0.00 4.02
8795 12435 1.062587 CGAATTGCCCTACAAAGCTCG 59.937 52.381 0.00 0.00 42.86 5.03
8811 12451 5.365619 ACTTCACCTTAACTCAACACGAAT 58.634 37.500 0.00 0.00 0.00 3.34
8840 12480 6.149807 ACAAAACGACTCAACTTCCTGTTAAA 59.850 34.615 0.00 0.00 37.07 1.52
8885 12525 7.884816 TCTCGTACTTGAAAAATTCCTACTG 57.115 36.000 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.