Multiple sequence alignment - TraesCS6B01G257300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G257300 chr6B 100.000 2261 0 0 1 2261 461962864 461960604 0.000000e+00 4176.0
1 TraesCS6B01G257300 chr6B 92.532 924 56 5 924 1836 461903745 461902824 0.000000e+00 1312.0
2 TraesCS6B01G257300 chr6B 88.838 1084 60 19 997 2053 461848264 461847215 0.000000e+00 1275.0
3 TraesCS6B01G257300 chr6B 100.000 153 0 0 2610 2762 461960255 461960103 1.620000e-72 283.0
4 TraesCS6B01G257300 chr6B 90.099 202 14 3 717 913 461903995 461903795 9.810000e-65 257.0
5 TraesCS6B01G257300 chr6B 87.059 170 12 5 1899 2058 461902783 461902614 1.690000e-42 183.0
6 TraesCS6B01G257300 chr6B 94.118 68 4 0 335 402 461904207 461904140 1.350000e-18 104.0
7 TraesCS6B01G257300 chr6D 93.993 1182 48 8 717 1880 298445095 298443919 0.000000e+00 1768.0
8 TraesCS6B01G257300 chr6D 87.862 1450 73 31 717 2117 298399613 298398218 0.000000e+00 1607.0
9 TraesCS6B01G257300 chr6D 94.641 765 35 3 997 1761 298207284 298206526 0.000000e+00 1181.0
10 TraesCS6B01G257300 chr6D 92.529 348 23 2 1898 2244 298443936 298443591 1.910000e-136 496.0
11 TraesCS6B01G257300 chr6D 83.203 256 43 0 1007 1262 352835538 352835793 4.600000e-58 235.0
12 TraesCS6B01G257300 chr6D 94.355 124 5 2 205 326 69216890 69216767 3.630000e-44 189.0
13 TraesCS6B01G257300 chr6D 84.146 82 13 0 1261 1342 352835885 352835966 2.280000e-11 80.5
14 TraesCS6B01G257300 chr6A 92.721 1154 55 10 714 1838 420973411 420974564 0.000000e+00 1639.0
15 TraesCS6B01G257300 chr6A 90.844 1114 52 24 725 1788 421102460 421103573 0.000000e+00 1447.0
16 TraesCS6B01G257300 chr6A 93.359 783 42 5 997 1778 421367879 421368652 0.000000e+00 1149.0
17 TraesCS6B01G257300 chr6A 92.839 768 49 3 997 1761 421226061 421226825 0.000000e+00 1109.0
18 TraesCS6B01G257300 chr6A 88.889 162 13 4 1899 2055 421103591 421103752 7.800000e-46 195.0
19 TraesCS6B01G257300 chr6A 90.816 98 9 0 1899 1996 420974613 420974710 6.210000e-27 132.0
20 TraesCS6B01G257300 chr2B 94.009 217 13 0 409 625 234630804 234630588 2.050000e-86 329.0
21 TraesCS6B01G257300 chr2B 93.636 220 13 1 407 626 714323990 714324208 7.380000e-86 327.0
22 TraesCS6B01G257300 chr2B 93.636 220 13 1 407 626 714325766 714325984 7.380000e-86 327.0
23 TraesCS6B01G257300 chr2B 92.237 219 17 0 408 626 373185547 373185765 7.430000e-81 311.0
24 TraesCS6B01G257300 chr1B 91.739 230 13 6 404 629 605942077 605941850 5.740000e-82 315.0
25 TraesCS6B01G257300 chr1B 92.308 221 16 1 406 626 688690602 688690383 2.070000e-81 313.0
26 TraesCS6B01G257300 chr1B 87.324 213 22 3 1 208 642466573 642466361 3.550000e-59 239.0
27 TraesCS6B01G257300 chr5D 92.661 218 14 2 407 624 9283984 9284199 2.070000e-81 313.0
28 TraesCS6B01G257300 chr5D 80.709 254 40 8 1016 1263 418936106 418935856 3.630000e-44 189.0
29 TraesCS6B01G257300 chr5D 94.309 123 6 1 205 326 72487964 72487842 1.310000e-43 187.0
30 TraesCS6B01G257300 chr2D 92.661 218 15 1 409 626 619871532 619871316 2.070000e-81 313.0
31 TraesCS6B01G257300 chr2D 92.237 219 17 0 408 626 526224545 526224763 7.430000e-81 311.0
32 TraesCS6B01G257300 chr2D 92.913 127 7 2 205 330 607960154 607960279 1.690000e-42 183.0
33 TraesCS6B01G257300 chr1D 90.610 213 15 1 1 208 65592615 65592403 7.530000e-71 278.0
34 TraesCS6B01G257300 chr1D 93.600 125 7 1 205 328 202951344 202951220 4.700000e-43 185.0
35 TraesCS6B01G257300 chr1D 88.235 153 18 0 2610 2762 160531080 160531232 1.690000e-42 183.0
36 TraesCS6B01G257300 chr1D 84.173 139 20 2 1126 1263 449674778 449674915 1.730000e-27 134.0
37 TraesCS6B01G257300 chr1D 82.734 139 22 2 1126 1263 449752770 449752907 3.740000e-24 122.0
38 TraesCS6B01G257300 chr1D 97.222 36 1 0 1034 1069 60317147 60317182 8.260000e-06 62.1
39 TraesCS6B01G257300 chrUn 95.041 121 5 1 205 324 132113257 132113377 3.630000e-44 189.0
40 TraesCS6B01G257300 chrUn 93.651 126 6 2 207 330 95800910 95800785 1.310000e-43 187.0
41 TraesCS6B01G257300 chr7D 94.309 123 6 1 205 327 17698876 17698755 1.310000e-43 187.0
42 TraesCS6B01G257300 chr3D 94.309 123 5 2 205 325 23635007 23634885 1.310000e-43 187.0
43 TraesCS6B01G257300 chr3D 79.913 229 42 4 1036 1262 492131459 492131685 6.120000e-37 165.0
44 TraesCS6B01G257300 chr3D 75.893 224 47 7 1042 1262 442173353 442173572 1.050000e-19 108.0
45 TraesCS6B01G257300 chr3A 92.969 128 7 2 207 332 19067645 19067772 4.700000e-43 185.0
46 TraesCS6B01G257300 chr1A 84.314 153 24 0 2610 2762 223459307 223459459 1.710000e-32 150.0
47 TraesCS6B01G257300 chr1A 83.704 135 20 2 1130 1263 544748434 544748567 2.890000e-25 126.0
48 TraesCS6B01G257300 chr1A 82.143 84 11 4 88 169 440553734 440553653 4.940000e-08 69.4
49 TraesCS6B01G257300 chr1A 97.222 36 1 0 1034 1069 58946556 58946591 8.260000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G257300 chr6B 461960103 461962864 2761 True 2229.5 4176 100.0000 1 2762 2 chr6B.!!$R3 2761
1 TraesCS6B01G257300 chr6B 461847215 461848264 1049 True 1275.0 1275 88.8380 997 2053 1 chr6B.!!$R1 1056
2 TraesCS6B01G257300 chr6B 461902614 461904207 1593 True 464.0 1312 90.9520 335 2058 4 chr6B.!!$R2 1723
3 TraesCS6B01G257300 chr6D 298398218 298399613 1395 True 1607.0 1607 87.8620 717 2117 1 chr6D.!!$R3 1400
4 TraesCS6B01G257300 chr6D 298206526 298207284 758 True 1181.0 1181 94.6410 997 1761 1 chr6D.!!$R2 764
5 TraesCS6B01G257300 chr6D 298443591 298445095 1504 True 1132.0 1768 93.2610 717 2244 2 chr6D.!!$R4 1527
6 TraesCS6B01G257300 chr6A 421367879 421368652 773 False 1149.0 1149 93.3590 997 1778 1 chr6A.!!$F2 781
7 TraesCS6B01G257300 chr6A 421226061 421226825 764 False 1109.0 1109 92.8390 997 1761 1 chr6A.!!$F1 764
8 TraesCS6B01G257300 chr6A 420973411 420974710 1299 False 885.5 1639 91.7685 714 1996 2 chr6A.!!$F3 1282
9 TraesCS6B01G257300 chr6A 421102460 421103752 1292 False 821.0 1447 89.8665 725 2055 2 chr6A.!!$F4 1330
10 TraesCS6B01G257300 chr2B 714323990 714325984 1994 False 327.0 327 93.6360 407 626 2 chr2B.!!$F2 219

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
569 570 0.036022 TGAATGCCACGTGTCATCCA 59.964 50.0 13.12 2.86 0.0 3.41 F
967 1072 0.109086 TGCGCGAAGAGAAGAGAAGG 60.109 55.0 12.10 0.00 0.0 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1549 2348 0.035725 TCCGACTCCGAGTAAGAGCA 60.036 55.0 0.0 0.0 38.22 4.26 R
1894 3377 0.319641 ACTCAGCCGACGAACTTTCC 60.320 55.0 0.0 0.0 0.00 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.719478 CAAAATTACAGAAACTAAGACTGCAG 57.281 34.615 13.48 13.48 35.38 4.41
26 27 6.487689 AATTACAGAAACTAAGACTGCAGC 57.512 37.500 15.27 6.85 35.38 5.25
27 28 2.772287 ACAGAAACTAAGACTGCAGCC 58.228 47.619 15.27 1.42 35.38 4.85
28 29 2.104792 ACAGAAACTAAGACTGCAGCCA 59.895 45.455 15.27 0.00 35.38 4.75
29 30 2.481952 CAGAAACTAAGACTGCAGCCAC 59.518 50.000 15.27 5.81 0.00 5.01
30 31 1.461127 GAAACTAAGACTGCAGCCACG 59.539 52.381 15.27 1.13 0.00 4.94
31 32 0.951040 AACTAAGACTGCAGCCACGC 60.951 55.000 15.27 0.00 0.00 5.34
32 33 1.079543 CTAAGACTGCAGCCACGCT 60.080 57.895 15.27 0.46 40.77 5.07
33 34 1.079819 TAAGACTGCAGCCACGCTC 60.080 57.895 15.27 2.19 36.40 5.03
34 35 2.819117 TAAGACTGCAGCCACGCTCG 62.819 60.000 15.27 0.00 36.40 5.03
35 36 4.724602 GACTGCAGCCACGCTCGA 62.725 66.667 15.27 0.00 36.40 4.04
36 37 4.731612 ACTGCAGCCACGCTCGAG 62.732 66.667 15.27 8.45 36.40 4.04
40 41 4.069232 CAGCCACGCTCGAGGGAA 62.069 66.667 33.29 0.00 36.40 3.97
41 42 3.311110 AGCCACGCTCGAGGGAAA 61.311 61.111 33.29 0.00 30.62 3.13
42 43 3.119096 GCCACGCTCGAGGGAAAC 61.119 66.667 33.29 18.06 0.00 2.78
43 44 2.657237 CCACGCTCGAGGGAAACT 59.343 61.111 33.29 10.43 0.00 2.66
44 45 1.738099 CCACGCTCGAGGGAAACTG 60.738 63.158 33.29 20.82 0.00 3.16
45 46 1.289066 CACGCTCGAGGGAAACTGA 59.711 57.895 33.29 0.00 0.00 3.41
46 47 0.319555 CACGCTCGAGGGAAACTGAA 60.320 55.000 33.29 0.00 0.00 3.02
47 48 0.391597 ACGCTCGAGGGAAACTGAAA 59.608 50.000 33.29 0.00 0.00 2.69
48 49 1.202604 ACGCTCGAGGGAAACTGAAAA 60.203 47.619 33.29 0.00 0.00 2.29
49 50 2.076863 CGCTCGAGGGAAACTGAAAAT 58.923 47.619 24.08 0.00 0.00 1.82
50 51 3.259064 CGCTCGAGGGAAACTGAAAATA 58.741 45.455 24.08 0.00 0.00 1.40
51 52 3.307242 CGCTCGAGGGAAACTGAAAATAG 59.693 47.826 24.08 0.00 0.00 1.73
52 53 4.254492 GCTCGAGGGAAACTGAAAATAGT 58.746 43.478 15.58 0.00 0.00 2.12
53 54 5.416947 GCTCGAGGGAAACTGAAAATAGTA 58.583 41.667 15.58 0.00 0.00 1.82
54 55 6.049790 GCTCGAGGGAAACTGAAAATAGTAT 58.950 40.000 15.58 0.00 0.00 2.12
55 56 6.018669 GCTCGAGGGAAACTGAAAATAGTATG 60.019 42.308 15.58 0.00 0.00 2.39
56 57 7.177832 TCGAGGGAAACTGAAAATAGTATGA 57.822 36.000 0.00 0.00 0.00 2.15
57 58 7.265673 TCGAGGGAAACTGAAAATAGTATGAG 58.734 38.462 0.00 0.00 0.00 2.90
58 59 6.018669 CGAGGGAAACTGAAAATAGTATGAGC 60.019 42.308 0.00 0.00 0.00 4.26
59 60 6.122964 AGGGAAACTGAAAATAGTATGAGCC 58.877 40.000 0.00 0.00 0.00 4.70
60 61 5.885912 GGGAAACTGAAAATAGTATGAGCCA 59.114 40.000 0.00 0.00 0.00 4.75
61 62 6.377146 GGGAAACTGAAAATAGTATGAGCCAA 59.623 38.462 0.00 0.00 0.00 4.52
62 63 7.415653 GGGAAACTGAAAATAGTATGAGCCAAG 60.416 40.741 0.00 0.00 0.00 3.61
63 64 7.121315 GGAAACTGAAAATAGTATGAGCCAAGT 59.879 37.037 0.00 0.00 0.00 3.16
64 65 7.617041 AACTGAAAATAGTATGAGCCAAGTC 57.383 36.000 0.00 0.00 0.00 3.01
65 66 6.116126 ACTGAAAATAGTATGAGCCAAGTCC 58.884 40.000 0.00 0.00 0.00 3.85
66 67 5.116180 TGAAAATAGTATGAGCCAAGTCCG 58.884 41.667 0.00 0.00 0.00 4.79
67 68 5.105106 TGAAAATAGTATGAGCCAAGTCCGA 60.105 40.000 0.00 0.00 0.00 4.55
68 69 5.353394 AAATAGTATGAGCCAAGTCCGAA 57.647 39.130 0.00 0.00 0.00 4.30
69 70 2.674796 AGTATGAGCCAAGTCCGAAC 57.325 50.000 0.00 0.00 0.00 3.95
70 71 2.180276 AGTATGAGCCAAGTCCGAACT 58.820 47.619 0.00 0.00 37.32 3.01
71 72 2.567615 AGTATGAGCCAAGTCCGAACTT 59.432 45.455 0.00 0.00 46.80 2.66
81 82 2.991250 AGTCCGAACTTGATGAATGGG 58.009 47.619 0.00 0.00 28.74 4.00
82 83 2.305927 AGTCCGAACTTGATGAATGGGT 59.694 45.455 0.00 0.00 28.74 4.51
83 84 2.420022 GTCCGAACTTGATGAATGGGTG 59.580 50.000 0.00 0.00 0.00 4.61
84 85 1.133025 CCGAACTTGATGAATGGGTGC 59.867 52.381 0.00 0.00 0.00 5.01
85 86 1.811965 CGAACTTGATGAATGGGTGCA 59.188 47.619 0.00 0.00 0.00 4.57
86 87 2.424601 CGAACTTGATGAATGGGTGCAT 59.575 45.455 0.00 0.00 0.00 3.96
87 88 3.627123 CGAACTTGATGAATGGGTGCATA 59.373 43.478 0.00 0.00 0.00 3.14
88 89 4.260907 CGAACTTGATGAATGGGTGCATAG 60.261 45.833 0.00 0.00 0.00 2.23
89 90 3.559069 ACTTGATGAATGGGTGCATAGG 58.441 45.455 0.00 0.00 0.00 2.57
90 91 2.662535 TGATGAATGGGTGCATAGGG 57.337 50.000 0.00 0.00 0.00 3.53
91 92 2.134354 TGATGAATGGGTGCATAGGGA 58.866 47.619 0.00 0.00 0.00 4.20
92 93 2.107031 TGATGAATGGGTGCATAGGGAG 59.893 50.000 0.00 0.00 0.00 4.30
93 94 0.846015 TGAATGGGTGCATAGGGAGG 59.154 55.000 0.00 0.00 0.00 4.30
94 95 1.140312 GAATGGGTGCATAGGGAGGA 58.860 55.000 0.00 0.00 0.00 3.71
95 96 1.072965 GAATGGGTGCATAGGGAGGAG 59.927 57.143 0.00 0.00 0.00 3.69
96 97 0.769776 ATGGGTGCATAGGGAGGAGG 60.770 60.000 0.00 0.00 0.00 4.30
97 98 1.384643 GGGTGCATAGGGAGGAGGT 60.385 63.158 0.00 0.00 0.00 3.85
98 99 0.988678 GGGTGCATAGGGAGGAGGTT 60.989 60.000 0.00 0.00 0.00 3.50
99 100 1.694693 GGGTGCATAGGGAGGAGGTTA 60.695 57.143 0.00 0.00 0.00 2.85
100 101 2.339769 GGTGCATAGGGAGGAGGTTAT 58.660 52.381 0.00 0.00 0.00 1.89
101 102 2.039084 GGTGCATAGGGAGGAGGTTATG 59.961 54.545 0.00 0.00 0.00 1.90
102 103 2.706190 GTGCATAGGGAGGAGGTTATGT 59.294 50.000 0.00 0.00 0.00 2.29
103 104 2.705658 TGCATAGGGAGGAGGTTATGTG 59.294 50.000 0.00 0.00 0.00 3.21
104 105 2.039084 GCATAGGGAGGAGGTTATGTGG 59.961 54.545 0.00 0.00 0.00 4.17
105 106 3.587498 CATAGGGAGGAGGTTATGTGGA 58.413 50.000 0.00 0.00 0.00 4.02
106 107 2.182516 AGGGAGGAGGTTATGTGGAG 57.817 55.000 0.00 0.00 0.00 3.86
107 108 1.132500 GGGAGGAGGTTATGTGGAGG 58.868 60.000 0.00 0.00 0.00 4.30
108 109 0.470341 GGAGGAGGTTATGTGGAGGC 59.530 60.000 0.00 0.00 0.00 4.70
109 110 1.204146 GAGGAGGTTATGTGGAGGCA 58.796 55.000 0.00 0.00 0.00 4.75
110 111 1.559682 GAGGAGGTTATGTGGAGGCAA 59.440 52.381 0.00 0.00 0.00 4.52
111 112 1.992557 AGGAGGTTATGTGGAGGCAAA 59.007 47.619 0.00 0.00 0.00 3.68
112 113 2.025887 AGGAGGTTATGTGGAGGCAAAG 60.026 50.000 0.00 0.00 0.00 2.77
113 114 2.026262 GGAGGTTATGTGGAGGCAAAGA 60.026 50.000 0.00 0.00 0.00 2.52
114 115 3.372025 GGAGGTTATGTGGAGGCAAAGAT 60.372 47.826 0.00 0.00 0.00 2.40
115 116 3.879892 GAGGTTATGTGGAGGCAAAGATC 59.120 47.826 0.00 0.00 0.00 2.75
116 117 3.525199 AGGTTATGTGGAGGCAAAGATCT 59.475 43.478 0.00 0.00 0.00 2.75
117 118 4.721776 AGGTTATGTGGAGGCAAAGATCTA 59.278 41.667 0.00 0.00 0.00 1.98
118 119 5.059833 GGTTATGTGGAGGCAAAGATCTAG 58.940 45.833 0.00 0.00 0.00 2.43
119 120 5.163301 GGTTATGTGGAGGCAAAGATCTAGA 60.163 44.000 0.00 0.00 0.00 2.43
120 121 6.465035 GGTTATGTGGAGGCAAAGATCTAGAT 60.465 42.308 4.47 4.47 0.00 1.98
121 122 5.643421 ATGTGGAGGCAAAGATCTAGATT 57.357 39.130 6.70 0.00 0.00 2.40
122 123 5.028549 TGTGGAGGCAAAGATCTAGATTC 57.971 43.478 6.70 0.00 0.00 2.52
123 124 4.718774 TGTGGAGGCAAAGATCTAGATTCT 59.281 41.667 6.70 2.97 0.00 2.40
124 125 5.163364 TGTGGAGGCAAAGATCTAGATTCTC 60.163 44.000 6.70 7.43 0.00 2.87
125 126 5.070313 GTGGAGGCAAAGATCTAGATTCTCT 59.930 44.000 6.70 0.00 0.00 3.10
126 127 5.664908 TGGAGGCAAAGATCTAGATTCTCTT 59.335 40.000 6.70 3.95 0.00 2.85
127 128 5.990996 GGAGGCAAAGATCTAGATTCTCTTG 59.009 44.000 6.70 9.12 29.96 3.02
128 129 5.927819 AGGCAAAGATCTAGATTCTCTTGG 58.072 41.667 6.70 5.70 29.96 3.61
129 130 4.514816 GGCAAAGATCTAGATTCTCTTGGC 59.485 45.833 19.48 19.48 42.65 4.52
130 131 5.367302 GCAAAGATCTAGATTCTCTTGGCT 58.633 41.667 20.05 4.19 40.99 4.75
131 132 5.236911 GCAAAGATCTAGATTCTCTTGGCTG 59.763 44.000 20.05 11.26 40.99 4.85
132 133 4.605640 AGATCTAGATTCTCTTGGCTGC 57.394 45.455 6.70 0.00 0.00 5.25
133 134 3.966006 AGATCTAGATTCTCTTGGCTGCA 59.034 43.478 6.70 0.00 0.00 4.41
134 135 4.594062 AGATCTAGATTCTCTTGGCTGCAT 59.406 41.667 6.70 0.00 0.00 3.96
135 136 4.069300 TCTAGATTCTCTTGGCTGCATG 57.931 45.455 0.50 0.00 0.00 4.06
136 137 3.708121 TCTAGATTCTCTTGGCTGCATGA 59.292 43.478 0.50 0.00 0.00 3.07
137 138 3.361281 AGATTCTCTTGGCTGCATGAA 57.639 42.857 0.50 0.00 0.00 2.57
138 139 3.280295 AGATTCTCTTGGCTGCATGAAG 58.720 45.455 0.50 0.00 0.00 3.02
139 140 1.830279 TTCTCTTGGCTGCATGAAGG 58.170 50.000 1.96 0.00 0.00 3.46
140 141 0.986527 TCTCTTGGCTGCATGAAGGA 59.013 50.000 1.96 0.00 0.00 3.36
141 142 1.065636 TCTCTTGGCTGCATGAAGGAG 60.066 52.381 1.96 0.52 38.96 3.69
142 143 0.986527 TCTTGGCTGCATGAAGGAGA 59.013 50.000 1.96 0.00 38.04 3.71
143 144 1.562942 TCTTGGCTGCATGAAGGAGAT 59.437 47.619 1.96 0.00 38.04 2.75
144 145 2.773661 TCTTGGCTGCATGAAGGAGATA 59.226 45.455 1.96 0.00 38.04 1.98
145 146 2.924757 TGGCTGCATGAAGGAGATAG 57.075 50.000 1.96 0.00 38.04 2.08
146 147 1.419012 TGGCTGCATGAAGGAGATAGG 59.581 52.381 1.96 0.00 38.04 2.57
147 148 1.696336 GGCTGCATGAAGGAGATAGGA 59.304 52.381 1.96 0.00 38.04 2.94
148 149 2.105477 GGCTGCATGAAGGAGATAGGAA 59.895 50.000 1.96 0.00 38.04 3.36
149 150 3.137533 GCTGCATGAAGGAGATAGGAAC 58.862 50.000 1.96 0.00 38.04 3.62
150 151 3.432749 GCTGCATGAAGGAGATAGGAACA 60.433 47.826 1.96 0.00 38.04 3.18
151 152 4.125703 CTGCATGAAGGAGATAGGAACAC 58.874 47.826 0.00 0.00 38.04 3.32
152 153 3.126831 GCATGAAGGAGATAGGAACACG 58.873 50.000 0.00 0.00 0.00 4.49
153 154 3.722147 CATGAAGGAGATAGGAACACGG 58.278 50.000 0.00 0.00 0.00 4.94
154 155 3.095912 TGAAGGAGATAGGAACACGGA 57.904 47.619 0.00 0.00 0.00 4.69
155 156 3.437213 TGAAGGAGATAGGAACACGGAA 58.563 45.455 0.00 0.00 0.00 4.30
156 157 4.030913 TGAAGGAGATAGGAACACGGAAT 58.969 43.478 0.00 0.00 0.00 3.01
157 158 4.469945 TGAAGGAGATAGGAACACGGAATT 59.530 41.667 0.00 0.00 0.00 2.17
158 159 5.045869 TGAAGGAGATAGGAACACGGAATTT 60.046 40.000 0.00 0.00 0.00 1.82
159 160 5.437191 AGGAGATAGGAACACGGAATTTT 57.563 39.130 0.00 0.00 0.00 1.82
160 161 5.816682 AGGAGATAGGAACACGGAATTTTT 58.183 37.500 0.00 0.00 0.00 1.94
161 162 5.880887 AGGAGATAGGAACACGGAATTTTTC 59.119 40.000 0.00 0.00 0.00 2.29
162 163 5.066117 GGAGATAGGAACACGGAATTTTTCC 59.934 44.000 0.00 0.00 46.62 3.13
180 181 5.708736 TTTCCATAGGAAAGCTACATGGA 57.291 39.130 7.11 9.41 45.42 3.41
181 182 4.963318 TCCATAGGAAAGCTACATGGAG 57.037 45.455 0.00 0.00 40.11 3.86
182 183 4.556697 TCCATAGGAAAGCTACATGGAGA 58.443 43.478 9.87 0.00 40.11 3.71
183 184 4.968719 TCCATAGGAAAGCTACATGGAGAA 59.031 41.667 9.87 0.00 40.11 2.87
184 185 5.070981 TCCATAGGAAAGCTACATGGAGAAG 59.929 44.000 9.87 0.00 40.11 2.85
185 186 3.922171 AGGAAAGCTACATGGAGAAGG 57.078 47.619 9.87 0.00 0.00 3.46
186 187 3.454858 AGGAAAGCTACATGGAGAAGGA 58.545 45.455 9.87 0.00 0.00 3.36
187 188 3.846588 AGGAAAGCTACATGGAGAAGGAA 59.153 43.478 9.87 0.00 0.00 3.36
188 189 4.080638 AGGAAAGCTACATGGAGAAGGAAG 60.081 45.833 9.87 0.00 0.00 3.46
189 190 4.080863 GGAAAGCTACATGGAGAAGGAAGA 60.081 45.833 9.87 0.00 0.00 2.87
190 191 5.491982 GAAAGCTACATGGAGAAGGAAGAA 58.508 41.667 9.87 0.00 0.00 2.52
191 192 4.751767 AGCTACATGGAGAAGGAAGAAG 57.248 45.455 9.87 0.00 0.00 2.85
192 193 4.357325 AGCTACATGGAGAAGGAAGAAGA 58.643 43.478 9.87 0.00 0.00 2.87
193 194 4.780021 AGCTACATGGAGAAGGAAGAAGAA 59.220 41.667 9.87 0.00 0.00 2.52
194 195 5.428131 AGCTACATGGAGAAGGAAGAAGAAT 59.572 40.000 9.87 0.00 0.00 2.40
195 196 6.613271 AGCTACATGGAGAAGGAAGAAGAATA 59.387 38.462 9.87 0.00 0.00 1.75
196 197 7.126421 AGCTACATGGAGAAGGAAGAAGAATAA 59.874 37.037 9.87 0.00 0.00 1.40
197 198 7.770897 GCTACATGGAGAAGGAAGAAGAATAAA 59.229 37.037 9.87 0.00 0.00 1.40
198 199 9.323985 CTACATGGAGAAGGAAGAAGAATAAAG 57.676 37.037 0.00 0.00 0.00 1.85
199 200 7.694093 ACATGGAGAAGGAAGAAGAATAAAGT 58.306 34.615 0.00 0.00 0.00 2.66
200 201 8.826765 ACATGGAGAAGGAAGAAGAATAAAGTA 58.173 33.333 0.00 0.00 0.00 2.24
201 202 9.323985 CATGGAGAAGGAAGAAGAATAAAGTAG 57.676 37.037 0.00 0.00 0.00 2.57
202 203 8.666129 TGGAGAAGGAAGAAGAATAAAGTAGA 57.334 34.615 0.00 0.00 0.00 2.59
203 204 8.754080 TGGAGAAGGAAGAAGAATAAAGTAGAG 58.246 37.037 0.00 0.00 0.00 2.43
204 205 8.973182 GGAGAAGGAAGAAGAATAAAGTAGAGA 58.027 37.037 0.00 0.00 0.00 3.10
206 207 9.762381 AGAAGGAAGAAGAATAAAGTAGAGAGA 57.238 33.333 0.00 0.00 0.00 3.10
207 208 9.797556 GAAGGAAGAAGAATAAAGTAGAGAGAC 57.202 37.037 0.00 0.00 0.00 3.36
208 209 7.992008 AGGAAGAAGAATAAAGTAGAGAGACG 58.008 38.462 0.00 0.00 0.00 4.18
209 210 7.067737 AGGAAGAAGAATAAAGTAGAGAGACGG 59.932 40.741 0.00 0.00 0.00 4.79
210 211 7.148035 GGAAGAAGAATAAAGTAGAGAGACGGT 60.148 40.741 0.00 0.00 0.00 4.83
211 212 7.090953 AGAAGAATAAAGTAGAGAGACGGTG 57.909 40.000 0.00 0.00 0.00 4.94
212 213 5.838531 AGAATAAAGTAGAGAGACGGTGG 57.161 43.478 0.00 0.00 0.00 4.61
213 214 4.098196 AGAATAAAGTAGAGAGACGGTGGC 59.902 45.833 0.00 0.00 0.00 5.01
214 215 1.926108 AAAGTAGAGAGACGGTGGCT 58.074 50.000 0.00 0.00 0.00 4.75
215 216 1.926108 AAGTAGAGAGACGGTGGCTT 58.074 50.000 0.00 0.00 0.00 4.35
216 217 1.926108 AGTAGAGAGACGGTGGCTTT 58.074 50.000 0.00 0.00 0.00 3.51
217 218 3.083122 AGTAGAGAGACGGTGGCTTTA 57.917 47.619 0.00 0.00 0.00 1.85
218 219 3.018149 AGTAGAGAGACGGTGGCTTTAG 58.982 50.000 0.00 0.00 0.00 1.85
219 220 1.926108 AGAGAGACGGTGGCTTTAGT 58.074 50.000 0.00 0.00 0.00 2.24
220 221 1.819903 AGAGAGACGGTGGCTTTAGTC 59.180 52.381 0.00 0.00 0.00 2.59
221 222 1.819903 GAGAGACGGTGGCTTTAGTCT 59.180 52.381 5.43 5.43 45.46 3.24
222 223 2.231721 GAGAGACGGTGGCTTTAGTCTT 59.768 50.000 6.83 0.00 43.17 3.01
223 224 3.428532 AGAGACGGTGGCTTTAGTCTTA 58.571 45.455 6.83 0.00 43.17 2.10
224 225 4.024670 AGAGACGGTGGCTTTAGTCTTAT 58.975 43.478 6.83 0.00 43.17 1.73
225 226 4.466726 AGAGACGGTGGCTTTAGTCTTATT 59.533 41.667 6.83 0.00 43.17 1.40
226 227 4.504858 AGACGGTGGCTTTAGTCTTATTG 58.495 43.478 0.00 0.00 40.64 1.90
227 228 4.020485 AGACGGTGGCTTTAGTCTTATTGT 60.020 41.667 0.00 0.00 40.64 2.71
228 229 4.648651 ACGGTGGCTTTAGTCTTATTGTT 58.351 39.130 0.00 0.00 0.00 2.83
229 230 4.454504 ACGGTGGCTTTAGTCTTATTGTTG 59.545 41.667 0.00 0.00 0.00 3.33
230 231 4.454504 CGGTGGCTTTAGTCTTATTGTTGT 59.545 41.667 0.00 0.00 0.00 3.32
231 232 5.640357 CGGTGGCTTTAGTCTTATTGTTGTA 59.360 40.000 0.00 0.00 0.00 2.41
232 233 6.315393 CGGTGGCTTTAGTCTTATTGTTGTAT 59.685 38.462 0.00 0.00 0.00 2.29
233 234 7.472543 GGTGGCTTTAGTCTTATTGTTGTATG 58.527 38.462 0.00 0.00 0.00 2.39
234 235 7.335924 GGTGGCTTTAGTCTTATTGTTGTATGA 59.664 37.037 0.00 0.00 0.00 2.15
235 236 8.175716 GTGGCTTTAGTCTTATTGTTGTATGAC 58.824 37.037 0.00 0.00 0.00 3.06
236 237 8.100791 TGGCTTTAGTCTTATTGTTGTATGACT 58.899 33.333 0.00 0.00 40.27 3.41
237 238 8.947115 GGCTTTAGTCTTATTGTTGTATGACTT 58.053 33.333 0.00 0.00 38.90 3.01
245 246 9.787435 TCTTATTGTTGTATGACTTTGTAAGGT 57.213 29.630 0.00 0.00 0.00 3.50
277 278 9.701098 ATGAATAATTAATAAAGTGGCTGCATG 57.299 29.630 0.50 0.00 0.00 4.06
278 279 7.652909 TGAATAATTAATAAAGTGGCTGCATGC 59.347 33.333 11.82 11.82 41.94 4.06
279 280 5.341872 AATTAATAAAGTGGCTGCATGCA 57.658 34.783 21.29 21.29 45.15 3.96
280 281 5.540400 ATTAATAAAGTGGCTGCATGCAT 57.460 34.783 22.97 6.91 45.15 3.96
281 282 3.447918 AATAAAGTGGCTGCATGCATC 57.552 42.857 22.97 17.75 45.15 3.91
282 283 0.734309 TAAAGTGGCTGCATGCATCG 59.266 50.000 22.97 12.00 45.15 3.84
283 284 1.246056 AAAGTGGCTGCATGCATCGT 61.246 50.000 22.97 7.77 45.15 3.73
284 285 1.651240 AAGTGGCTGCATGCATCGTC 61.651 55.000 22.97 13.00 45.15 4.20
285 286 2.825387 TGGCTGCATGCATCGTCC 60.825 61.111 22.97 19.03 45.15 4.79
286 287 2.825387 GGCTGCATGCATCGTCCA 60.825 61.111 22.97 0.00 45.15 4.02
287 288 2.713770 GCTGCATGCATCGTCCAG 59.286 61.111 22.97 8.76 42.31 3.86
288 289 1.816679 GCTGCATGCATCGTCCAGA 60.817 57.895 22.97 0.00 42.31 3.86
289 290 1.164662 GCTGCATGCATCGTCCAGAT 61.165 55.000 22.97 0.00 42.31 2.90
297 298 1.445095 ATCGTCCAGATGCAGAGGC 59.555 57.895 0.00 0.00 38.36 4.70
298 299 1.047596 ATCGTCCAGATGCAGAGGCT 61.048 55.000 0.00 0.00 41.91 4.58
299 300 1.521010 CGTCCAGATGCAGAGGCTG 60.521 63.158 0.00 0.00 41.91 4.85
301 302 2.192443 CCAGATGCAGAGGCTGGG 59.808 66.667 15.93 0.00 44.24 4.45
302 303 2.192443 CAGATGCAGAGGCTGGGG 59.808 66.667 0.00 0.00 41.91 4.96
303 304 2.285969 AGATGCAGAGGCTGGGGT 60.286 61.111 0.00 0.00 41.91 4.95
304 305 2.191641 GATGCAGAGGCTGGGGTC 59.808 66.667 0.00 0.00 41.91 4.46
305 306 3.412624 GATGCAGAGGCTGGGGTCC 62.413 68.421 0.00 0.00 41.91 4.46
306 307 3.958629 ATGCAGAGGCTGGGGTCCT 62.959 63.158 0.00 0.00 41.91 3.85
310 311 2.766229 GAGGCTGGGGTCCTCCTC 60.766 72.222 0.00 8.98 43.32 3.71
311 312 4.423209 AGGCTGGGGTCCTCCTCC 62.423 72.222 0.00 0.00 32.02 4.30
312 313 4.741239 GGCTGGGGTCCTCCTCCA 62.741 72.222 0.00 0.00 34.50 3.86
313 314 2.367512 GCTGGGGTCCTCCTCCAT 60.368 66.667 0.00 0.00 34.94 3.41
314 315 2.003548 GCTGGGGTCCTCCTCCATT 61.004 63.158 0.00 0.00 34.94 3.16
315 316 1.575447 GCTGGGGTCCTCCTCCATTT 61.575 60.000 0.00 0.00 34.94 2.32
316 317 1.893315 CTGGGGTCCTCCTCCATTTA 58.107 55.000 0.00 0.00 34.94 1.40
317 318 2.205342 CTGGGGTCCTCCTCCATTTAA 58.795 52.381 0.00 0.00 34.94 1.52
318 319 2.580783 CTGGGGTCCTCCTCCATTTAAA 59.419 50.000 0.00 0.00 34.94 1.52
319 320 2.997463 TGGGGTCCTCCTCCATTTAAAA 59.003 45.455 0.00 0.00 32.02 1.52
320 321 3.403051 TGGGGTCCTCCTCCATTTAAAAA 59.597 43.478 0.00 0.00 32.02 1.94
374 375 3.338249 GAGGCAGCAGTTCACTAATCAA 58.662 45.455 0.00 0.00 0.00 2.57
387 388 8.370940 AGTTCACTAATCAATTCAGAGAGAACA 58.629 33.333 11.31 0.00 39.49 3.18
394 395 5.258841 TCAATTCAGAGAGAACAATGCCAT 58.741 37.500 0.00 0.00 39.49 4.40
402 403 3.438087 AGAGAACAATGCCATCAGAAACG 59.562 43.478 0.00 0.00 0.00 3.60
403 404 2.489329 AGAACAATGCCATCAGAAACGG 59.511 45.455 0.00 0.00 0.00 4.44
404 405 1.176527 ACAATGCCATCAGAAACGGG 58.823 50.000 0.00 0.00 0.00 5.28
405 406 1.271871 ACAATGCCATCAGAAACGGGA 60.272 47.619 0.00 0.00 0.00 5.14
460 461 2.990479 GGTGAGACCCGCCTTGAT 59.010 61.111 0.00 0.00 42.19 2.57
461 462 1.450312 GGTGAGACCCGCCTTGATG 60.450 63.158 0.00 0.00 42.19 3.07
462 463 1.450312 GTGAGACCCGCCTTGATGG 60.450 63.158 0.00 0.00 39.35 3.51
463 464 1.612146 TGAGACCCGCCTTGATGGA 60.612 57.895 0.00 0.00 38.35 3.41
464 465 0.982852 TGAGACCCGCCTTGATGGAT 60.983 55.000 0.00 0.00 38.35 3.41
465 466 0.533755 GAGACCCGCCTTGATGGATG 60.534 60.000 0.00 0.00 38.35 3.51
466 467 0.982852 AGACCCGCCTTGATGGATGA 60.983 55.000 0.00 0.00 38.35 2.92
467 468 0.815615 GACCCGCCTTGATGGATGAC 60.816 60.000 0.00 0.00 38.35 3.06
468 469 1.224315 CCCGCCTTGATGGATGACA 59.776 57.895 0.00 0.00 38.35 3.58
469 470 1.097547 CCCGCCTTGATGGATGACAC 61.098 60.000 0.00 0.00 38.35 3.67
470 471 1.431488 CCGCCTTGATGGATGACACG 61.431 60.000 0.00 0.00 38.35 4.49
471 472 0.740868 CGCCTTGATGGATGACACGT 60.741 55.000 0.00 0.00 38.35 4.49
472 473 0.729116 GCCTTGATGGATGACACGTG 59.271 55.000 15.48 15.48 38.35 4.49
473 474 1.675714 GCCTTGATGGATGACACGTGA 60.676 52.381 25.01 0.00 38.35 4.35
474 475 2.002586 CCTTGATGGATGACACGTGAC 58.997 52.381 25.01 17.68 38.35 3.67
475 476 2.612721 CCTTGATGGATGACACGTGACA 60.613 50.000 25.01 23.44 38.35 3.58
476 477 3.264947 CTTGATGGATGACACGTGACAT 58.735 45.455 28.93 28.93 33.43 3.06
477 478 3.333029 TGATGGATGACACGTGACATT 57.667 42.857 29.08 16.96 31.08 2.71
478 479 3.261580 TGATGGATGACACGTGACATTC 58.738 45.455 29.08 27.59 31.08 2.67
479 480 2.829741 TGGATGACACGTGACATTCA 57.170 45.000 29.97 29.97 34.27 2.57
480 481 3.333029 TGGATGACACGTGACATTCAT 57.667 42.857 29.97 23.52 32.30 2.57
481 482 4.464069 TGGATGACACGTGACATTCATA 57.536 40.909 29.97 14.55 32.30 2.15
482 483 4.826556 TGGATGACACGTGACATTCATAA 58.173 39.130 29.97 13.93 32.30 1.90
483 484 5.241662 TGGATGACACGTGACATTCATAAA 58.758 37.500 29.97 13.62 32.30 1.40
484 485 5.879777 TGGATGACACGTGACATTCATAAAT 59.120 36.000 29.97 11.24 32.30 1.40
485 486 6.037062 TGGATGACACGTGACATTCATAAATC 59.963 38.462 29.97 17.85 32.30 2.17
486 487 6.037062 GGATGACACGTGACATTCATAAATCA 59.963 38.462 29.08 15.41 31.08 2.57
487 488 6.164408 TGACACGTGACATTCATAAATCAC 57.836 37.500 25.01 0.00 0.00 3.06
488 489 5.698545 TGACACGTGACATTCATAAATCACA 59.301 36.000 25.01 0.00 0.00 3.58
489 490 6.203723 TGACACGTGACATTCATAAATCACAA 59.796 34.615 25.01 0.00 0.00 3.33
490 491 6.964908 ACACGTGACATTCATAAATCACAAA 58.035 32.000 25.01 0.00 0.00 2.83
491 492 7.077605 ACACGTGACATTCATAAATCACAAAG 58.922 34.615 25.01 0.00 0.00 2.77
492 493 6.032775 CACGTGACATTCATAAATCACAAAGC 59.967 38.462 10.90 0.00 0.00 3.51
493 494 6.085573 CGTGACATTCATAAATCACAAAGCA 58.914 36.000 4.31 0.00 0.00 3.91
494 495 6.748658 CGTGACATTCATAAATCACAAAGCAT 59.251 34.615 4.31 0.00 0.00 3.79
495 496 7.044510 CGTGACATTCATAAATCACAAAGCATC 60.045 37.037 4.31 0.00 0.00 3.91
496 497 7.972277 GTGACATTCATAAATCACAAAGCATCT 59.028 33.333 0.00 0.00 0.00 2.90
497 498 9.176460 TGACATTCATAAATCACAAAGCATCTA 57.824 29.630 0.00 0.00 0.00 1.98
503 504 9.842775 TCATAAATCACAAAGCATCTAATCTCT 57.157 29.630 0.00 0.00 0.00 3.10
506 507 8.804912 AAATCACAAAGCATCTAATCTCTTCT 57.195 30.769 0.00 0.00 0.00 2.85
507 508 8.436046 AATCACAAAGCATCTAATCTCTTCTC 57.564 34.615 0.00 0.00 0.00 2.87
508 509 6.344500 TCACAAAGCATCTAATCTCTTCTCC 58.656 40.000 0.00 0.00 0.00 3.71
509 510 5.526846 CACAAAGCATCTAATCTCTTCTCCC 59.473 44.000 0.00 0.00 0.00 4.30
510 511 5.428131 ACAAAGCATCTAATCTCTTCTCCCT 59.572 40.000 0.00 0.00 0.00 4.20
511 512 5.549742 AAGCATCTAATCTCTTCTCCCTG 57.450 43.478 0.00 0.00 0.00 4.45
512 513 4.813809 AGCATCTAATCTCTTCTCCCTGA 58.186 43.478 0.00 0.00 0.00 3.86
513 514 5.405279 AGCATCTAATCTCTTCTCCCTGAT 58.595 41.667 0.00 0.00 0.00 2.90
514 515 5.845614 AGCATCTAATCTCTTCTCCCTGATT 59.154 40.000 0.00 0.00 34.16 2.57
515 516 6.329723 AGCATCTAATCTCTTCTCCCTGATTT 59.670 38.462 0.00 0.00 32.33 2.17
516 517 6.997476 GCATCTAATCTCTTCTCCCTGATTTT 59.003 38.462 0.00 0.00 32.33 1.82
517 518 8.153550 GCATCTAATCTCTTCTCCCTGATTTTA 58.846 37.037 0.00 0.00 32.33 1.52
518 519 9.709495 CATCTAATCTCTTCTCCCTGATTTTAG 57.291 37.037 0.00 0.00 32.33 1.85
519 520 8.256356 TCTAATCTCTTCTCCCTGATTTTAGG 57.744 38.462 0.00 0.00 37.59 2.69
520 521 6.899892 AATCTCTTCTCCCTGATTTTAGGT 57.100 37.500 0.00 0.00 36.02 3.08
521 522 5.683876 TCTCTTCTCCCTGATTTTAGGTG 57.316 43.478 0.00 0.00 36.02 4.00
522 523 5.342017 TCTCTTCTCCCTGATTTTAGGTGA 58.658 41.667 0.00 0.00 36.02 4.02
523 524 5.423610 TCTCTTCTCCCTGATTTTAGGTGAG 59.576 44.000 0.00 0.00 36.91 3.51
524 525 4.471386 TCTTCTCCCTGATTTTAGGTGAGG 59.529 45.833 0.00 0.00 36.55 3.86
525 526 3.115390 TCTCCCTGATTTTAGGTGAGGG 58.885 50.000 0.00 0.00 44.36 4.30
526 527 2.173569 CTCCCTGATTTTAGGTGAGGGG 59.826 54.545 0.00 0.00 43.34 4.79
527 528 1.923148 CCCTGATTTTAGGTGAGGGGT 59.077 52.381 0.00 0.00 39.94 4.95
528 529 2.357154 CCCTGATTTTAGGTGAGGGGTG 60.357 54.545 0.00 0.00 39.94 4.61
529 530 2.576191 CCTGATTTTAGGTGAGGGGTGA 59.424 50.000 0.00 0.00 32.99 4.02
530 531 3.370953 CCTGATTTTAGGTGAGGGGTGAG 60.371 52.174 0.00 0.00 32.99 3.51
531 532 2.576191 TGATTTTAGGTGAGGGGTGAGG 59.424 50.000 0.00 0.00 0.00 3.86
532 533 2.127651 TTTTAGGTGAGGGGTGAGGT 57.872 50.000 0.00 0.00 0.00 3.85
533 534 3.278987 TTTTAGGTGAGGGGTGAGGTA 57.721 47.619 0.00 0.00 0.00 3.08
534 535 2.544844 TTAGGTGAGGGGTGAGGTAG 57.455 55.000 0.00 0.00 0.00 3.18
535 536 1.690010 TAGGTGAGGGGTGAGGTAGA 58.310 55.000 0.00 0.00 0.00 2.59
536 537 1.019650 AGGTGAGGGGTGAGGTAGAT 58.980 55.000 0.00 0.00 0.00 1.98
537 538 1.123928 GGTGAGGGGTGAGGTAGATG 58.876 60.000 0.00 0.00 0.00 2.90
538 539 0.466124 GTGAGGGGTGAGGTAGATGC 59.534 60.000 0.00 0.00 0.00 3.91
539 540 0.339859 TGAGGGGTGAGGTAGATGCT 59.660 55.000 0.00 0.00 0.00 3.79
540 541 1.273838 TGAGGGGTGAGGTAGATGCTT 60.274 52.381 0.00 0.00 0.00 3.91
541 542 1.840635 GAGGGGTGAGGTAGATGCTTT 59.159 52.381 0.00 0.00 0.00 3.51
542 543 1.561542 AGGGGTGAGGTAGATGCTTTG 59.438 52.381 0.00 0.00 0.00 2.77
543 544 1.282157 GGGGTGAGGTAGATGCTTTGT 59.718 52.381 0.00 0.00 0.00 2.83
544 545 2.359900 GGGTGAGGTAGATGCTTTGTG 58.640 52.381 0.00 0.00 0.00 3.33
545 546 2.027192 GGGTGAGGTAGATGCTTTGTGA 60.027 50.000 0.00 0.00 0.00 3.58
546 547 3.370953 GGGTGAGGTAGATGCTTTGTGAT 60.371 47.826 0.00 0.00 0.00 3.06
547 548 4.265073 GGTGAGGTAGATGCTTTGTGATT 58.735 43.478 0.00 0.00 0.00 2.57
548 549 4.702131 GGTGAGGTAGATGCTTTGTGATTT 59.298 41.667 0.00 0.00 0.00 2.17
549 550 5.392380 GGTGAGGTAGATGCTTTGTGATTTG 60.392 44.000 0.00 0.00 0.00 2.32
550 551 5.182001 GTGAGGTAGATGCTTTGTGATTTGT 59.818 40.000 0.00 0.00 0.00 2.83
551 552 5.181811 TGAGGTAGATGCTTTGTGATTTGTG 59.818 40.000 0.00 0.00 0.00 3.33
552 553 5.316167 AGGTAGATGCTTTGTGATTTGTGA 58.684 37.500 0.00 0.00 0.00 3.58
553 554 5.769662 AGGTAGATGCTTTGTGATTTGTGAA 59.230 36.000 0.00 0.00 0.00 3.18
554 555 6.435277 AGGTAGATGCTTTGTGATTTGTGAAT 59.565 34.615 0.00 0.00 0.00 2.57
555 556 6.529125 GGTAGATGCTTTGTGATTTGTGAATG 59.471 38.462 0.00 0.00 0.00 2.67
556 557 4.927425 AGATGCTTTGTGATTTGTGAATGC 59.073 37.500 0.00 0.00 0.00 3.56
557 558 3.391965 TGCTTTGTGATTTGTGAATGCC 58.608 40.909 0.00 0.00 0.00 4.40
558 559 3.181468 TGCTTTGTGATTTGTGAATGCCA 60.181 39.130 0.00 0.00 0.00 4.92
559 560 3.184986 GCTTTGTGATTTGTGAATGCCAC 59.815 43.478 0.00 0.00 45.88 5.01
567 568 3.975992 GTGAATGCCACGTGTCATC 57.024 52.632 13.12 7.23 35.86 2.92
568 569 0.447801 GTGAATGCCACGTGTCATCC 59.552 55.000 13.12 0.00 35.86 3.51
569 570 0.036022 TGAATGCCACGTGTCATCCA 59.964 50.000 13.12 2.86 0.00 3.41
570 571 1.339920 TGAATGCCACGTGTCATCCAT 60.340 47.619 13.12 0.00 0.00 3.41
571 572 1.331756 GAATGCCACGTGTCATCCATC 59.668 52.381 13.12 3.25 0.00 3.51
572 573 0.252761 ATGCCACGTGTCATCCATCA 59.747 50.000 15.65 0.00 0.00 3.07
573 574 0.391528 TGCCACGTGTCATCCATCAG 60.392 55.000 15.65 0.00 0.00 2.90
574 575 1.091771 GCCACGTGTCATCCATCAGG 61.092 60.000 15.65 0.00 0.00 3.86
595 596 3.936564 GATGGGTCTCATCTGCTAATCC 58.063 50.000 5.37 0.00 46.59 3.01
596 597 1.688735 TGGGTCTCATCTGCTAATCCG 59.311 52.381 0.00 0.00 0.00 4.18
597 598 1.689273 GGGTCTCATCTGCTAATCCGT 59.311 52.381 0.00 0.00 0.00 4.69
598 599 2.546795 GGGTCTCATCTGCTAATCCGTG 60.547 54.545 0.00 0.00 0.00 4.94
599 600 2.362397 GGTCTCATCTGCTAATCCGTGA 59.638 50.000 0.00 0.00 0.00 4.35
600 601 3.551863 GGTCTCATCTGCTAATCCGTGAG 60.552 52.174 0.00 0.00 35.58 3.51
601 602 3.316588 GTCTCATCTGCTAATCCGTGAGA 59.683 47.826 0.00 0.00 39.59 3.27
602 603 3.316588 TCTCATCTGCTAATCCGTGAGAC 59.683 47.826 0.00 0.00 37.69 3.36
603 604 2.362397 TCATCTGCTAATCCGTGAGACC 59.638 50.000 0.00 0.00 0.00 3.85
604 605 2.145397 TCTGCTAATCCGTGAGACCT 57.855 50.000 0.00 0.00 0.00 3.85
605 606 1.751351 TCTGCTAATCCGTGAGACCTG 59.249 52.381 0.00 0.00 0.00 4.00
606 607 1.751351 CTGCTAATCCGTGAGACCTGA 59.249 52.381 0.00 0.00 0.00 3.86
607 608 2.363680 CTGCTAATCCGTGAGACCTGAT 59.636 50.000 0.00 0.00 0.00 2.90
608 609 2.362397 TGCTAATCCGTGAGACCTGATC 59.638 50.000 0.00 0.00 0.00 2.92
609 610 2.625790 GCTAATCCGTGAGACCTGATCT 59.374 50.000 0.00 0.00 41.91 2.75
654 655 4.943705 GTGGATTTTAGAATGAGCACAGGA 59.056 41.667 0.00 0.00 0.00 3.86
655 656 5.065731 GTGGATTTTAGAATGAGCACAGGAG 59.934 44.000 0.00 0.00 0.00 3.69
656 657 5.189180 GGATTTTAGAATGAGCACAGGAGT 58.811 41.667 0.00 0.00 0.00 3.85
657 658 6.070251 TGGATTTTAGAATGAGCACAGGAGTA 60.070 38.462 0.00 0.00 0.00 2.59
658 659 6.258947 GGATTTTAGAATGAGCACAGGAGTAC 59.741 42.308 0.00 0.00 0.00 2.73
662 663 8.762481 TTTAGAATGAGCACAGGAGTACTATA 57.238 34.615 0.00 0.00 0.00 1.31
663 664 8.941995 TTAGAATGAGCACAGGAGTACTATAT 57.058 34.615 0.00 0.00 0.00 0.86
665 666 8.574251 AGAATGAGCACAGGAGTACTATATAG 57.426 38.462 8.27 8.27 0.00 1.31
666 667 8.167392 AGAATGAGCACAGGAGTACTATATAGT 58.833 37.037 19.07 19.07 40.24 2.12
669 670 8.618702 TGAGCACAGGAGTACTATATAGTAAC 57.381 38.462 21.51 17.60 40.20 2.50
690 691 5.211174 ACTAAAGTAGAACCAAAGCGAGT 57.789 39.130 0.00 0.00 0.00 4.18
696 697 8.788325 AAAGTAGAACCAAAGCGAGTAATAAT 57.212 30.769 0.00 0.00 0.00 1.28
702 703 5.741011 ACCAAAGCGAGTAATAATCAAGGA 58.259 37.500 0.00 0.00 0.00 3.36
715 759 7.513371 AATAATCAAGGAAACAAACACCGTA 57.487 32.000 0.00 0.00 0.00 4.02
738 782 1.693083 GCGAACGTTGCTATTCCGCT 61.693 55.000 17.63 0.00 0.00 5.52
743 787 1.135315 ACGTTGCTATTCCGCTTCGTA 60.135 47.619 0.00 0.00 37.80 3.43
783 831 0.941463 CATTCGGCTCGATCCTTCCG 60.941 60.000 3.43 7.60 42.96 4.30
967 1072 0.109086 TGCGCGAAGAGAAGAGAAGG 60.109 55.000 12.10 0.00 0.00 3.46
976 1081 2.175202 GAGAAGAGAAGGGTGCAGAGA 58.825 52.381 0.00 0.00 0.00 3.10
980 1085 0.322975 GAGAAGGGTGCAGAGAAGCA 59.677 55.000 0.00 0.00 43.35 3.91
991 1104 3.007290 TGCAGAGAAGCACACAGAGTAAT 59.993 43.478 0.00 0.00 40.11 1.89
1329 1442 0.874175 TCAAGAACGTCTGGCACACG 60.874 55.000 13.80 13.80 43.13 4.49
1368 1484 3.744719 TCCTCGTCCAAGCCGTCG 61.745 66.667 0.00 0.00 0.00 5.12
1404 1566 2.259511 CGCAAAGCCAAGAAGCCC 59.740 61.111 0.00 0.00 0.00 5.19
1549 2348 2.030562 CGTTGGAGAACACGGGCT 59.969 61.111 0.00 0.00 31.78 5.19
1556 2358 0.246635 GAGAACACGGGCTGCTCTTA 59.753 55.000 0.00 0.00 0.00 2.10
1737 3171 0.038599 TGTTCATGCAGGCTGGTGAT 59.961 50.000 17.64 0.00 0.00 3.06
1868 3351 0.447801 CCATTTGGCCTCGAAGTTCG 59.552 55.000 19.23 19.23 42.10 3.95
1870 3353 1.128692 CATTTGGCCTCGAAGTTCGTC 59.871 52.381 23.67 14.01 41.35 4.20
1871 3354 0.942410 TTTGGCCTCGAAGTTCGTCG 60.942 55.000 23.67 15.68 41.35 5.12
1872 3355 2.506438 GGCCTCGAAGTTCGTCGG 60.506 66.667 23.67 23.28 41.35 4.79
1873 3356 3.179939 GCCTCGAAGTTCGTCGGC 61.180 66.667 30.36 30.36 44.61 5.54
1874 3357 2.567049 CCTCGAAGTTCGTCGGCT 59.433 61.111 23.67 0.00 41.35 5.52
1875 3358 1.801913 CCTCGAAGTTCGTCGGCTG 60.802 63.158 23.67 8.99 41.35 4.85
1876 3359 1.209383 CTCGAAGTTCGTCGGCTGA 59.791 57.895 23.67 2.92 41.35 4.26
1877 3360 0.794981 CTCGAAGTTCGTCGGCTGAG 60.795 60.000 23.67 9.08 41.35 3.35
1878 3361 1.081376 CGAAGTTCGTCGGCTGAGT 60.081 57.895 17.16 0.00 37.37 3.41
1879 3362 0.663568 CGAAGTTCGTCGGCTGAGTT 60.664 55.000 17.16 0.00 37.37 3.01
1880 3363 1.499049 GAAGTTCGTCGGCTGAGTTT 58.501 50.000 0.00 0.00 0.00 2.66
1881 3364 1.865340 GAAGTTCGTCGGCTGAGTTTT 59.135 47.619 0.00 0.00 0.00 2.43
1882 3365 1.949465 AGTTCGTCGGCTGAGTTTTT 58.051 45.000 0.00 0.00 0.00 1.94
1959 3442 4.360964 TGCGCATTGGCTGGCAAC 62.361 61.111 19.40 7.05 38.10 4.17
2043 3537 4.579869 TCAAGGACTGAAAGCCTGATAAC 58.420 43.478 0.00 0.00 39.12 1.89
2094 3604 5.940470 ACTCAGTAACCTGCTAAATCCTTTG 59.060 40.000 0.00 0.00 38.66 2.77
2108 3618 4.568152 ATCCTTTGTTCGTTGTTCCTTG 57.432 40.909 0.00 0.00 0.00 3.61
2119 3629 4.213270 TCGTTGTTCCTTGAGTTGCAATAG 59.787 41.667 0.59 0.00 35.59 1.73
2159 3669 8.138712 GTGTGGATAAAACACCAACAATTCTAA 58.861 33.333 0.00 0.00 41.70 2.10
2160 3670 8.865090 TGTGGATAAAACACCAACAATTCTAAT 58.135 29.630 0.00 0.00 37.94 1.73
2200 3710 5.830457 TGACCCAAACATTTGATCACTACAA 59.170 36.000 5.91 0.00 40.55 2.41
2216 3726 5.813157 TCACTACAAGAAAATCACACGTCAA 59.187 36.000 0.00 0.00 0.00 3.18
2224 3734 7.582435 AGAAAATCACACGTCAACTAGTATG 57.418 36.000 0.00 0.00 0.00 2.39
2244 3754 3.418047 TGAAGACATACCTCGACTGTCA 58.582 45.455 8.73 0.00 41.34 3.58
2245 3755 3.824443 TGAAGACATACCTCGACTGTCAA 59.176 43.478 8.73 0.00 41.34 3.18
2246 3756 4.279922 TGAAGACATACCTCGACTGTCAAA 59.720 41.667 8.73 0.00 41.34 2.69
2247 3757 4.866508 AGACATACCTCGACTGTCAAAA 57.133 40.909 8.73 0.00 41.34 2.44
2248 3758 4.557205 AGACATACCTCGACTGTCAAAAC 58.443 43.478 8.73 0.00 41.34 2.43
2249 3759 4.038763 AGACATACCTCGACTGTCAAAACA 59.961 41.667 8.73 0.00 41.34 2.83
2250 3760 4.056050 ACATACCTCGACTGTCAAAACAC 58.944 43.478 8.73 0.00 0.00 3.32
2251 3761 1.567504 ACCTCGACTGTCAAAACACG 58.432 50.000 8.73 0.00 0.00 4.49
2252 3762 0.859232 CCTCGACTGTCAAAACACGG 59.141 55.000 8.73 0.00 0.00 4.94
2253 3763 0.859232 CTCGACTGTCAAAACACGGG 59.141 55.000 8.73 0.00 0.00 5.28
2254 3764 0.176219 TCGACTGTCAAAACACGGGT 59.824 50.000 8.73 0.00 0.00 5.28
2255 3765 1.011333 CGACTGTCAAAACACGGGTT 58.989 50.000 0.00 0.00 39.43 4.11
2256 3766 1.004292 CGACTGTCAAAACACGGGTTC 60.004 52.381 2.08 0.00 35.82 3.62
2257 3767 2.011222 GACTGTCAAAACACGGGTTCA 58.989 47.619 2.08 0.00 35.82 3.18
2258 3768 1.741145 ACTGTCAAAACACGGGTTCAC 59.259 47.619 2.08 1.57 35.82 3.18
2259 3769 0.727970 TGTCAAAACACGGGTTCACG 59.272 50.000 2.08 0.00 35.82 4.35
2260 3770 0.028374 GTCAAAACACGGGTTCACGG 59.972 55.000 2.08 0.00 35.82 4.94
2664 4174 3.782244 GGCGACGACAGCTTGCTG 61.782 66.667 19.62 19.62 34.52 4.41
2665 4175 3.782244 GCGACGACAGCTTGCTGG 61.782 66.667 23.98 11.47 0.00 4.85
2666 4176 3.782244 CGACGACAGCTTGCTGGC 61.782 66.667 23.98 21.09 0.00 4.85
2667 4177 2.358003 GACGACAGCTTGCTGGCT 60.358 61.111 23.78 12.40 44.10 4.75
2761 4271 4.573210 CCAGATCTGGCCACATGG 57.427 61.111 28.45 3.59 44.73 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.324616 GCTGCAGTCTTAGTTTCTGTAATTTTG 59.675 37.037 16.64 0.00 0.00 2.44
1 2 7.363431 GCTGCAGTCTTAGTTTCTGTAATTTT 58.637 34.615 16.64 0.00 0.00 1.82
2 3 6.072452 GGCTGCAGTCTTAGTTTCTGTAATTT 60.072 38.462 16.64 0.00 0.00 1.82
3 4 5.412904 GGCTGCAGTCTTAGTTTCTGTAATT 59.587 40.000 16.64 0.00 0.00 1.40
4 5 4.938226 GGCTGCAGTCTTAGTTTCTGTAAT 59.062 41.667 16.64 0.00 0.00 1.89
5 6 4.202315 TGGCTGCAGTCTTAGTTTCTGTAA 60.202 41.667 20.86 0.00 0.00 2.41
6 7 3.323691 TGGCTGCAGTCTTAGTTTCTGTA 59.676 43.478 20.86 0.00 0.00 2.74
7 8 2.104792 TGGCTGCAGTCTTAGTTTCTGT 59.895 45.455 20.86 0.00 0.00 3.41
8 9 2.481952 GTGGCTGCAGTCTTAGTTTCTG 59.518 50.000 20.86 0.00 0.00 3.02
9 10 2.772287 GTGGCTGCAGTCTTAGTTTCT 58.228 47.619 20.86 0.00 0.00 2.52
10 11 1.461127 CGTGGCTGCAGTCTTAGTTTC 59.539 52.381 20.86 0.00 0.00 2.78
11 12 1.512926 CGTGGCTGCAGTCTTAGTTT 58.487 50.000 20.86 0.00 0.00 2.66
12 13 0.951040 GCGTGGCTGCAGTCTTAGTT 60.951 55.000 20.86 0.00 34.15 2.24
13 14 1.374758 GCGTGGCTGCAGTCTTAGT 60.375 57.895 20.86 0.00 34.15 2.24
14 15 1.079543 AGCGTGGCTGCAGTCTTAG 60.080 57.895 20.86 11.55 37.57 2.18
15 16 1.079819 GAGCGTGGCTGCAGTCTTA 60.080 57.895 20.86 0.00 39.88 2.10
16 17 2.358003 GAGCGTGGCTGCAGTCTT 60.358 61.111 20.86 2.24 39.88 3.01
17 18 4.731612 CGAGCGTGGCTGCAGTCT 62.732 66.667 20.86 7.05 39.88 3.24
18 19 4.724602 TCGAGCGTGGCTGCAGTC 62.725 66.667 12.53 12.53 39.88 3.51
19 20 4.731612 CTCGAGCGTGGCTGCAGT 62.732 66.667 16.64 0.00 39.88 4.40
23 24 3.589654 TTTCCCTCGAGCGTGGCTG 62.590 63.158 6.99 0.00 39.88 4.85
24 25 3.311110 TTTCCCTCGAGCGTGGCT 61.311 61.111 6.99 0.00 43.88 4.75
25 26 3.119096 GTTTCCCTCGAGCGTGGC 61.119 66.667 6.99 0.00 0.00 5.01
26 27 1.738099 CAGTTTCCCTCGAGCGTGG 60.738 63.158 6.99 3.05 0.00 4.94
27 28 0.319555 TTCAGTTTCCCTCGAGCGTG 60.320 55.000 6.99 0.00 0.00 5.34
28 29 0.391597 TTTCAGTTTCCCTCGAGCGT 59.608 50.000 6.99 0.00 0.00 5.07
29 30 1.508632 TTTTCAGTTTCCCTCGAGCG 58.491 50.000 6.99 0.00 0.00 5.03
30 31 4.254492 ACTATTTTCAGTTTCCCTCGAGC 58.746 43.478 6.99 0.00 0.00 5.03
31 32 7.265673 TCATACTATTTTCAGTTTCCCTCGAG 58.734 38.462 5.13 5.13 0.00 4.04
32 33 7.177832 TCATACTATTTTCAGTTTCCCTCGA 57.822 36.000 0.00 0.00 0.00 4.04
33 34 6.018669 GCTCATACTATTTTCAGTTTCCCTCG 60.019 42.308 0.00 0.00 0.00 4.63
34 35 6.261158 GGCTCATACTATTTTCAGTTTCCCTC 59.739 42.308 0.00 0.00 0.00 4.30
35 36 6.122964 GGCTCATACTATTTTCAGTTTCCCT 58.877 40.000 0.00 0.00 0.00 4.20
36 37 5.885912 TGGCTCATACTATTTTCAGTTTCCC 59.114 40.000 0.00 0.00 0.00 3.97
37 38 7.121315 ACTTGGCTCATACTATTTTCAGTTTCC 59.879 37.037 0.00 0.00 0.00 3.13
38 39 8.045176 ACTTGGCTCATACTATTTTCAGTTTC 57.955 34.615 0.00 0.00 0.00 2.78
39 40 7.121315 GGACTTGGCTCATACTATTTTCAGTTT 59.879 37.037 0.00 0.00 0.00 2.66
40 41 6.599638 GGACTTGGCTCATACTATTTTCAGTT 59.400 38.462 0.00 0.00 0.00 3.16
41 42 6.116126 GGACTTGGCTCATACTATTTTCAGT 58.884 40.000 0.00 0.00 0.00 3.41
42 43 5.235186 CGGACTTGGCTCATACTATTTTCAG 59.765 44.000 0.00 0.00 0.00 3.02
43 44 5.105106 TCGGACTTGGCTCATACTATTTTCA 60.105 40.000 0.00 0.00 0.00 2.69
44 45 5.357257 TCGGACTTGGCTCATACTATTTTC 58.643 41.667 0.00 0.00 0.00 2.29
45 46 5.353394 TCGGACTTGGCTCATACTATTTT 57.647 39.130 0.00 0.00 0.00 1.82
46 47 5.104900 AGTTCGGACTTGGCTCATACTATTT 60.105 40.000 0.00 0.00 29.87 1.40
47 48 4.406003 AGTTCGGACTTGGCTCATACTATT 59.594 41.667 0.00 0.00 29.87 1.73
48 49 3.961408 AGTTCGGACTTGGCTCATACTAT 59.039 43.478 0.00 0.00 29.87 2.12
49 50 3.362706 AGTTCGGACTTGGCTCATACTA 58.637 45.455 0.00 0.00 29.87 1.82
50 51 2.180276 AGTTCGGACTTGGCTCATACT 58.820 47.619 0.00 0.00 29.87 2.12
51 52 2.674796 AGTTCGGACTTGGCTCATAC 57.325 50.000 0.00 0.00 29.87 2.39
60 61 3.244911 ACCCATTCATCAAGTTCGGACTT 60.245 43.478 2.29 2.29 46.85 3.01
61 62 2.305927 ACCCATTCATCAAGTTCGGACT 59.694 45.455 0.00 0.00 37.87 3.85
62 63 2.420022 CACCCATTCATCAAGTTCGGAC 59.580 50.000 0.00 0.00 0.00 4.79
63 64 2.710377 CACCCATTCATCAAGTTCGGA 58.290 47.619 0.00 0.00 0.00 4.55
64 65 1.133025 GCACCCATTCATCAAGTTCGG 59.867 52.381 0.00 0.00 0.00 4.30
65 66 1.811965 TGCACCCATTCATCAAGTTCG 59.188 47.619 0.00 0.00 0.00 3.95
66 67 4.037208 CCTATGCACCCATTCATCAAGTTC 59.963 45.833 0.00 0.00 32.85 3.01
67 68 3.956199 CCTATGCACCCATTCATCAAGTT 59.044 43.478 0.00 0.00 32.85 2.66
68 69 3.559069 CCTATGCACCCATTCATCAAGT 58.441 45.455 0.00 0.00 32.85 3.16
69 70 2.889045 CCCTATGCACCCATTCATCAAG 59.111 50.000 0.00 0.00 32.85 3.02
70 71 2.513317 TCCCTATGCACCCATTCATCAA 59.487 45.455 0.00 0.00 32.85 2.57
71 72 2.107031 CTCCCTATGCACCCATTCATCA 59.893 50.000 0.00 0.00 32.85 3.07
72 73 2.553904 CCTCCCTATGCACCCATTCATC 60.554 54.545 0.00 0.00 32.85 2.92
73 74 1.426598 CCTCCCTATGCACCCATTCAT 59.573 52.381 0.00 0.00 32.85 2.57
74 75 0.846015 CCTCCCTATGCACCCATTCA 59.154 55.000 0.00 0.00 32.85 2.57
75 76 1.072965 CTCCTCCCTATGCACCCATTC 59.927 57.143 0.00 0.00 32.85 2.67
76 77 1.143813 CTCCTCCCTATGCACCCATT 58.856 55.000 0.00 0.00 32.85 3.16
77 78 0.769776 CCTCCTCCCTATGCACCCAT 60.770 60.000 0.00 0.00 35.44 4.00
78 79 1.384502 CCTCCTCCCTATGCACCCA 60.385 63.158 0.00 0.00 0.00 4.51
79 80 0.988678 AACCTCCTCCCTATGCACCC 60.989 60.000 0.00 0.00 0.00 4.61
80 81 1.802553 TAACCTCCTCCCTATGCACC 58.197 55.000 0.00 0.00 0.00 5.01
81 82 2.706190 ACATAACCTCCTCCCTATGCAC 59.294 50.000 0.00 0.00 0.00 4.57
82 83 2.705658 CACATAACCTCCTCCCTATGCA 59.294 50.000 0.00 0.00 0.00 3.96
83 84 2.039084 CCACATAACCTCCTCCCTATGC 59.961 54.545 0.00 0.00 0.00 3.14
84 85 3.580458 CTCCACATAACCTCCTCCCTATG 59.420 52.174 0.00 0.00 0.00 2.23
85 86 3.440154 CCTCCACATAACCTCCTCCCTAT 60.440 52.174 0.00 0.00 0.00 2.57
86 87 2.090719 CCTCCACATAACCTCCTCCCTA 60.091 54.545 0.00 0.00 0.00 3.53
87 88 1.344496 CCTCCACATAACCTCCTCCCT 60.344 57.143 0.00 0.00 0.00 4.20
88 89 1.132500 CCTCCACATAACCTCCTCCC 58.868 60.000 0.00 0.00 0.00 4.30
89 90 0.470341 GCCTCCACATAACCTCCTCC 59.530 60.000 0.00 0.00 0.00 4.30
90 91 1.204146 TGCCTCCACATAACCTCCTC 58.796 55.000 0.00 0.00 0.00 3.71
91 92 1.668826 TTGCCTCCACATAACCTCCT 58.331 50.000 0.00 0.00 0.00 3.69
92 93 2.026262 TCTTTGCCTCCACATAACCTCC 60.026 50.000 0.00 0.00 0.00 4.30
93 94 3.350219 TCTTTGCCTCCACATAACCTC 57.650 47.619 0.00 0.00 0.00 3.85
94 95 3.525199 AGATCTTTGCCTCCACATAACCT 59.475 43.478 0.00 0.00 0.00 3.50
95 96 3.891049 AGATCTTTGCCTCCACATAACC 58.109 45.455 0.00 0.00 0.00 2.85
96 97 5.918608 TCTAGATCTTTGCCTCCACATAAC 58.081 41.667 0.00 0.00 0.00 1.89
97 98 6.753913 ATCTAGATCTTTGCCTCCACATAA 57.246 37.500 0.00 0.00 0.00 1.90
98 99 6.556495 AGAATCTAGATCTTTGCCTCCACATA 59.444 38.462 5.51 0.00 0.00 2.29
99 100 5.369110 AGAATCTAGATCTTTGCCTCCACAT 59.631 40.000 5.51 0.00 0.00 3.21
100 101 4.718774 AGAATCTAGATCTTTGCCTCCACA 59.281 41.667 5.51 0.00 0.00 4.17
101 102 5.289083 AGAATCTAGATCTTTGCCTCCAC 57.711 43.478 5.51 0.00 0.00 4.02
102 103 5.543507 GAGAATCTAGATCTTTGCCTCCA 57.456 43.478 5.51 0.00 0.00 3.86
118 119 2.358267 CCTTCATGCAGCCAAGAGAATC 59.642 50.000 0.00 0.00 0.00 2.52
119 120 2.025605 TCCTTCATGCAGCCAAGAGAAT 60.026 45.455 0.00 0.00 0.00 2.40
120 121 1.352017 TCCTTCATGCAGCCAAGAGAA 59.648 47.619 0.00 0.00 0.00 2.87
121 122 0.986527 TCCTTCATGCAGCCAAGAGA 59.013 50.000 0.00 0.00 0.00 3.10
122 123 1.065636 TCTCCTTCATGCAGCCAAGAG 60.066 52.381 0.00 0.00 0.00 2.85
123 124 0.986527 TCTCCTTCATGCAGCCAAGA 59.013 50.000 0.00 0.00 0.00 3.02
124 125 2.054232 ATCTCCTTCATGCAGCCAAG 57.946 50.000 0.00 0.00 0.00 3.61
125 126 2.158711 CCTATCTCCTTCATGCAGCCAA 60.159 50.000 0.00 0.00 0.00 4.52
126 127 1.419012 CCTATCTCCTTCATGCAGCCA 59.581 52.381 0.00 0.00 0.00 4.75
127 128 1.696336 TCCTATCTCCTTCATGCAGCC 59.304 52.381 0.00 0.00 0.00 4.85
128 129 3.137533 GTTCCTATCTCCTTCATGCAGC 58.862 50.000 0.00 0.00 0.00 5.25
129 130 4.125703 GTGTTCCTATCTCCTTCATGCAG 58.874 47.826 0.00 0.00 0.00 4.41
130 131 3.430790 CGTGTTCCTATCTCCTTCATGCA 60.431 47.826 0.00 0.00 0.00 3.96
131 132 3.126831 CGTGTTCCTATCTCCTTCATGC 58.873 50.000 0.00 0.00 0.00 4.06
132 133 3.384789 TCCGTGTTCCTATCTCCTTCATG 59.615 47.826 0.00 0.00 0.00 3.07
133 134 3.643237 TCCGTGTTCCTATCTCCTTCAT 58.357 45.455 0.00 0.00 0.00 2.57
134 135 3.095912 TCCGTGTTCCTATCTCCTTCA 57.904 47.619 0.00 0.00 0.00 3.02
135 136 4.674281 ATTCCGTGTTCCTATCTCCTTC 57.326 45.455 0.00 0.00 0.00 3.46
136 137 5.437191 AAATTCCGTGTTCCTATCTCCTT 57.563 39.130 0.00 0.00 0.00 3.36
137 138 5.437191 AAAATTCCGTGTTCCTATCTCCT 57.563 39.130 0.00 0.00 0.00 3.69
138 139 5.066117 GGAAAAATTCCGTGTTCCTATCTCC 59.934 44.000 0.00 0.00 40.59 3.71
139 140 6.120378 GGAAAAATTCCGTGTTCCTATCTC 57.880 41.667 0.00 0.00 40.59 2.75
159 160 4.968719 TCTCCATGTAGCTTTCCTATGGAA 59.031 41.667 14.10 0.00 40.27 3.53
160 161 4.556697 TCTCCATGTAGCTTTCCTATGGA 58.443 43.478 13.12 13.12 34.37 3.41
161 162 4.963318 TCTCCATGTAGCTTTCCTATGG 57.037 45.455 0.00 0.00 30.53 2.74
162 163 5.070981 TCCTTCTCCATGTAGCTTTCCTATG 59.929 44.000 0.00 0.00 0.00 2.23
163 164 5.219739 TCCTTCTCCATGTAGCTTTCCTAT 58.780 41.667 0.00 0.00 0.00 2.57
164 165 4.620723 TCCTTCTCCATGTAGCTTTCCTA 58.379 43.478 0.00 0.00 0.00 2.94
165 166 3.454858 TCCTTCTCCATGTAGCTTTCCT 58.545 45.455 0.00 0.00 0.00 3.36
166 167 3.914426 TCCTTCTCCATGTAGCTTTCC 57.086 47.619 0.00 0.00 0.00 3.13
167 168 5.091261 TCTTCCTTCTCCATGTAGCTTTC 57.909 43.478 0.00 0.00 0.00 2.62
168 169 5.249393 TCTTCTTCCTTCTCCATGTAGCTTT 59.751 40.000 0.00 0.00 0.00 3.51
169 170 4.780021 TCTTCTTCCTTCTCCATGTAGCTT 59.220 41.667 0.00 0.00 0.00 3.74
170 171 4.357325 TCTTCTTCCTTCTCCATGTAGCT 58.643 43.478 0.00 0.00 0.00 3.32
171 172 4.744795 TCTTCTTCCTTCTCCATGTAGC 57.255 45.455 0.00 0.00 0.00 3.58
172 173 9.323985 CTTTATTCTTCTTCCTTCTCCATGTAG 57.676 37.037 0.00 0.00 0.00 2.74
173 174 8.826765 ACTTTATTCTTCTTCCTTCTCCATGTA 58.173 33.333 0.00 0.00 0.00 2.29
174 175 7.694093 ACTTTATTCTTCTTCCTTCTCCATGT 58.306 34.615 0.00 0.00 0.00 3.21
175 176 9.323985 CTACTTTATTCTTCTTCCTTCTCCATG 57.676 37.037 0.00 0.00 0.00 3.66
176 177 9.273137 TCTACTTTATTCTTCTTCCTTCTCCAT 57.727 33.333 0.00 0.00 0.00 3.41
177 178 8.666129 TCTACTTTATTCTTCTTCCTTCTCCA 57.334 34.615 0.00 0.00 0.00 3.86
178 179 8.973182 TCTCTACTTTATTCTTCTTCCTTCTCC 58.027 37.037 0.00 0.00 0.00 3.71
180 181 9.762381 TCTCTCTACTTTATTCTTCTTCCTTCT 57.238 33.333 0.00 0.00 0.00 2.85
181 182 9.797556 GTCTCTCTACTTTATTCTTCTTCCTTC 57.202 37.037 0.00 0.00 0.00 3.46
182 183 8.463607 CGTCTCTCTACTTTATTCTTCTTCCTT 58.536 37.037 0.00 0.00 0.00 3.36
183 184 7.067737 CCGTCTCTCTACTTTATTCTTCTTCCT 59.932 40.741 0.00 0.00 0.00 3.36
184 185 7.148035 ACCGTCTCTCTACTTTATTCTTCTTCC 60.148 40.741 0.00 0.00 0.00 3.46
185 186 7.698970 CACCGTCTCTCTACTTTATTCTTCTTC 59.301 40.741 0.00 0.00 0.00 2.87
186 187 7.363094 CCACCGTCTCTCTACTTTATTCTTCTT 60.363 40.741 0.00 0.00 0.00 2.52
187 188 6.095720 CCACCGTCTCTCTACTTTATTCTTCT 59.904 42.308 0.00 0.00 0.00 2.85
188 189 6.267070 CCACCGTCTCTCTACTTTATTCTTC 58.733 44.000 0.00 0.00 0.00 2.87
189 190 5.394333 GCCACCGTCTCTCTACTTTATTCTT 60.394 44.000 0.00 0.00 0.00 2.52
190 191 4.098196 GCCACCGTCTCTCTACTTTATTCT 59.902 45.833 0.00 0.00 0.00 2.40
191 192 4.098196 AGCCACCGTCTCTCTACTTTATTC 59.902 45.833 0.00 0.00 0.00 1.75
192 193 4.024670 AGCCACCGTCTCTCTACTTTATT 58.975 43.478 0.00 0.00 0.00 1.40
193 194 3.633418 AGCCACCGTCTCTCTACTTTAT 58.367 45.455 0.00 0.00 0.00 1.40
194 195 3.083122 AGCCACCGTCTCTCTACTTTA 57.917 47.619 0.00 0.00 0.00 1.85
195 196 1.926108 AGCCACCGTCTCTCTACTTT 58.074 50.000 0.00 0.00 0.00 2.66
196 197 1.926108 AAGCCACCGTCTCTCTACTT 58.074 50.000 0.00 0.00 0.00 2.24
197 198 1.926108 AAAGCCACCGTCTCTCTACT 58.074 50.000 0.00 0.00 0.00 2.57
198 199 2.754002 ACTAAAGCCACCGTCTCTCTAC 59.246 50.000 0.00 0.00 0.00 2.59
199 200 3.015327 GACTAAAGCCACCGTCTCTCTA 58.985 50.000 0.00 0.00 0.00 2.43
200 201 1.819903 GACTAAAGCCACCGTCTCTCT 59.180 52.381 0.00 0.00 0.00 3.10
201 202 1.819903 AGACTAAAGCCACCGTCTCTC 59.180 52.381 0.00 0.00 31.51 3.20
202 203 1.926108 AGACTAAAGCCACCGTCTCT 58.074 50.000 0.00 0.00 31.51 3.10
203 204 2.745515 AAGACTAAAGCCACCGTCTC 57.254 50.000 0.00 0.00 35.82 3.36
204 205 4.020485 ACAATAAGACTAAAGCCACCGTCT 60.020 41.667 0.00 0.00 38.29 4.18
205 206 4.251268 ACAATAAGACTAAAGCCACCGTC 58.749 43.478 0.00 0.00 0.00 4.79
206 207 4.281898 ACAATAAGACTAAAGCCACCGT 57.718 40.909 0.00 0.00 0.00 4.83
207 208 4.454504 ACAACAATAAGACTAAAGCCACCG 59.545 41.667 0.00 0.00 0.00 4.94
208 209 5.959618 ACAACAATAAGACTAAAGCCACC 57.040 39.130 0.00 0.00 0.00 4.61
209 210 8.175716 GTCATACAACAATAAGACTAAAGCCAC 58.824 37.037 0.00 0.00 0.00 5.01
210 211 8.100791 AGTCATACAACAATAAGACTAAAGCCA 58.899 33.333 0.00 0.00 32.70 4.75
211 212 8.494016 AGTCATACAACAATAAGACTAAAGCC 57.506 34.615 0.00 0.00 32.70 4.35
219 220 9.787435 ACCTTACAAAGTCATACAACAATAAGA 57.213 29.630 0.00 0.00 0.00 2.10
251 252 9.701098 CATGCAGCCACTTTATTAATTATTCAT 57.299 29.630 0.00 0.00 0.00 2.57
252 253 7.652909 GCATGCAGCCACTTTATTAATTATTCA 59.347 33.333 14.21 0.00 37.23 2.57
253 254 7.652909 TGCATGCAGCCACTTTATTAATTATTC 59.347 33.333 18.46 0.00 44.83 1.75
254 255 7.499292 TGCATGCAGCCACTTTATTAATTATT 58.501 30.769 18.46 0.00 44.83 1.40
255 256 7.053316 TGCATGCAGCCACTTTATTAATTAT 57.947 32.000 18.46 0.00 44.83 1.28
256 257 6.462552 TGCATGCAGCCACTTTATTAATTA 57.537 33.333 18.46 0.00 44.83 1.40
257 258 5.341872 TGCATGCAGCCACTTTATTAATT 57.658 34.783 18.46 0.00 44.83 1.40
258 259 5.535333 GATGCATGCAGCCACTTTATTAAT 58.465 37.500 25.21 2.11 44.83 1.40
259 260 4.497842 CGATGCATGCAGCCACTTTATTAA 60.498 41.667 28.76 0.00 44.83 1.40
260 261 3.003585 CGATGCATGCAGCCACTTTATTA 59.996 43.478 28.76 0.00 44.83 0.98
261 262 2.223641 CGATGCATGCAGCCACTTTATT 60.224 45.455 28.76 6.59 44.83 1.40
262 263 1.335810 CGATGCATGCAGCCACTTTAT 59.664 47.619 28.76 7.39 44.83 1.40
263 264 0.734309 CGATGCATGCAGCCACTTTA 59.266 50.000 28.76 0.09 44.83 1.85
264 265 1.246056 ACGATGCATGCAGCCACTTT 61.246 50.000 28.76 9.02 44.83 2.66
265 266 1.651240 GACGATGCATGCAGCCACTT 61.651 55.000 28.76 9.83 44.83 3.16
266 267 2.045634 ACGATGCATGCAGCCACT 60.046 55.556 28.76 10.64 44.83 4.00
267 268 2.406401 GACGATGCATGCAGCCAC 59.594 61.111 28.76 18.86 44.83 5.01
268 269 2.825387 GGACGATGCATGCAGCCA 60.825 61.111 28.76 3.84 44.83 4.75
269 270 2.825387 TGGACGATGCATGCAGCC 60.825 61.111 28.76 23.21 44.83 4.85
270 271 1.164662 ATCTGGACGATGCATGCAGC 61.165 55.000 25.69 25.69 45.96 5.25
271 272 0.586802 CATCTGGACGATGCATGCAG 59.413 55.000 26.69 15.79 42.75 4.41
272 273 2.697819 CATCTGGACGATGCATGCA 58.302 52.632 25.04 25.04 42.75 3.96
279 280 1.047596 AGCCTCTGCATCTGGACGAT 61.048 55.000 0.00 0.00 41.13 3.73
280 281 1.683707 AGCCTCTGCATCTGGACGA 60.684 57.895 0.00 0.00 41.13 4.20
281 282 1.521010 CAGCCTCTGCATCTGGACG 60.521 63.158 4.26 0.00 41.13 4.79
282 283 4.536316 CAGCCTCTGCATCTGGAC 57.464 61.111 4.26 0.00 41.13 4.02
284 285 2.192443 CCCAGCCTCTGCATCTGG 59.808 66.667 14.09 14.09 45.24 3.86
285 286 2.192443 CCCCAGCCTCTGCATCTG 59.808 66.667 0.00 0.00 41.13 2.90
286 287 2.285969 ACCCCAGCCTCTGCATCT 60.286 61.111 0.00 0.00 41.13 2.90
287 288 2.191641 GACCCCAGCCTCTGCATC 59.808 66.667 0.00 0.00 41.13 3.91
288 289 3.415087 GGACCCCAGCCTCTGCAT 61.415 66.667 0.00 0.00 41.13 3.96
289 290 4.664267 AGGACCCCAGCCTCTGCA 62.664 66.667 0.00 0.00 41.13 4.41
290 291 3.791586 GAGGACCCCAGCCTCTGC 61.792 72.222 0.00 0.00 46.70 4.26
294 295 4.423209 GGAGGAGGACCCCAGCCT 62.423 72.222 2.29 0.00 38.81 4.58
295 296 4.741239 TGGAGGAGGACCCCAGCC 62.741 72.222 2.29 3.73 33.66 4.85
296 297 1.575447 AAATGGAGGAGGACCCCAGC 61.575 60.000 2.29 0.00 38.94 4.85
297 298 1.893315 TAAATGGAGGAGGACCCCAG 58.107 55.000 2.29 0.00 38.94 4.45
298 299 2.369668 TTAAATGGAGGAGGACCCCA 57.630 50.000 2.29 0.00 39.52 4.96
299 300 3.750501 TTTTAAATGGAGGAGGACCCC 57.249 47.619 0.00 0.00 36.73 4.95
320 321 3.864003 GGAGCGAGCGTACTTATCTTTTT 59.136 43.478 0.00 0.00 0.00 1.94
321 322 3.130693 AGGAGCGAGCGTACTTATCTTTT 59.869 43.478 0.00 0.00 0.00 2.27
322 323 2.688958 AGGAGCGAGCGTACTTATCTTT 59.311 45.455 0.00 0.00 0.00 2.52
323 324 2.033550 CAGGAGCGAGCGTACTTATCTT 59.966 50.000 0.00 0.00 0.00 2.40
324 325 1.604755 CAGGAGCGAGCGTACTTATCT 59.395 52.381 0.00 0.00 0.00 1.98
325 326 1.602851 TCAGGAGCGAGCGTACTTATC 59.397 52.381 0.00 0.00 0.00 1.75
326 327 1.604755 CTCAGGAGCGAGCGTACTTAT 59.395 52.381 0.00 0.00 0.00 1.73
327 328 1.015109 CTCAGGAGCGAGCGTACTTA 58.985 55.000 0.00 0.00 0.00 2.24
328 329 0.677098 TCTCAGGAGCGAGCGTACTT 60.677 55.000 0.00 0.00 32.75 2.24
329 330 1.078356 TCTCAGGAGCGAGCGTACT 60.078 57.895 0.00 0.00 32.75 2.73
330 331 1.062845 GTCTCAGGAGCGAGCGTAC 59.937 63.158 0.00 0.00 32.75 3.67
331 332 0.958876 TTGTCTCAGGAGCGAGCGTA 60.959 55.000 0.00 0.00 32.75 4.42
332 333 1.806461 TTTGTCTCAGGAGCGAGCGT 61.806 55.000 0.00 0.00 32.75 5.07
333 334 1.080501 TTTGTCTCAGGAGCGAGCG 60.081 57.895 0.00 0.00 32.75 5.03
338 339 1.016653 GCCTCGTTTGTCTCAGGAGC 61.017 60.000 0.00 0.00 0.00 4.70
374 375 4.851843 TGATGGCATTGTTCTCTCTGAAT 58.148 39.130 0.00 0.00 36.99 2.57
387 388 2.214376 TTCCCGTTTCTGATGGCATT 57.786 45.000 0.00 0.00 32.64 3.56
456 457 2.829741 TGTCACGTGTCATCCATCAA 57.170 45.000 16.51 0.00 0.00 2.57
458 459 3.261580 TGAATGTCACGTGTCATCCATC 58.738 45.455 24.84 19.34 0.00 3.51
459 460 3.333029 TGAATGTCACGTGTCATCCAT 57.667 42.857 24.84 12.42 0.00 3.41
460 461 2.829741 TGAATGTCACGTGTCATCCA 57.170 45.000 24.84 18.07 0.00 3.41
461 462 5.794687 TTTATGAATGTCACGTGTCATCC 57.205 39.130 24.84 15.73 32.99 3.51
462 463 6.901887 GTGATTTATGAATGTCACGTGTCATC 59.098 38.462 24.84 18.48 32.64 2.92
463 464 6.371271 TGTGATTTATGAATGTCACGTGTCAT 59.629 34.615 20.34 20.34 42.86 3.06
464 465 5.698545 TGTGATTTATGAATGTCACGTGTCA 59.301 36.000 17.50 17.50 42.86 3.58
465 466 6.164408 TGTGATTTATGAATGTCACGTGTC 57.836 37.500 16.51 10.98 42.86 3.67
466 467 6.552859 TTGTGATTTATGAATGTCACGTGT 57.447 33.333 16.51 0.00 42.86 4.49
467 468 6.032775 GCTTTGTGATTTATGAATGTCACGTG 59.967 38.462 9.94 9.94 42.86 4.49
468 469 6.086222 GCTTTGTGATTTATGAATGTCACGT 58.914 36.000 0.00 0.00 42.86 4.49
469 470 6.085573 TGCTTTGTGATTTATGAATGTCACG 58.914 36.000 0.00 0.00 42.86 4.35
470 471 7.972277 AGATGCTTTGTGATTTATGAATGTCAC 59.028 33.333 0.00 0.00 40.93 3.67
471 472 8.058667 AGATGCTTTGTGATTTATGAATGTCA 57.941 30.769 0.00 0.00 0.00 3.58
477 478 9.842775 AGAGATTAGATGCTTTGTGATTTATGA 57.157 29.630 0.00 0.00 0.00 2.15
480 481 9.896645 AGAAGAGATTAGATGCTTTGTGATTTA 57.103 29.630 0.00 0.00 0.00 1.40
481 482 8.804912 AGAAGAGATTAGATGCTTTGTGATTT 57.195 30.769 0.00 0.00 0.00 2.17
482 483 7.498570 GGAGAAGAGATTAGATGCTTTGTGATT 59.501 37.037 0.00 0.00 0.00 2.57
483 484 6.991531 GGAGAAGAGATTAGATGCTTTGTGAT 59.008 38.462 0.00 0.00 0.00 3.06
484 485 6.344500 GGAGAAGAGATTAGATGCTTTGTGA 58.656 40.000 0.00 0.00 0.00 3.58
485 486 5.526846 GGGAGAAGAGATTAGATGCTTTGTG 59.473 44.000 0.00 0.00 0.00 3.33
486 487 5.428131 AGGGAGAAGAGATTAGATGCTTTGT 59.572 40.000 0.00 0.00 0.00 2.83
487 488 5.759273 CAGGGAGAAGAGATTAGATGCTTTG 59.241 44.000 0.00 0.00 0.00 2.77
488 489 5.664908 TCAGGGAGAAGAGATTAGATGCTTT 59.335 40.000 0.00 0.00 0.00 3.51
489 490 5.215069 TCAGGGAGAAGAGATTAGATGCTT 58.785 41.667 0.00 0.00 0.00 3.91
490 491 4.813809 TCAGGGAGAAGAGATTAGATGCT 58.186 43.478 0.00 0.00 0.00 3.79
491 492 5.743636 ATCAGGGAGAAGAGATTAGATGC 57.256 43.478 0.00 0.00 0.00 3.91
492 493 9.709495 CTAAAATCAGGGAGAAGAGATTAGATG 57.291 37.037 0.00 0.00 31.01 2.90
493 494 8.879227 CCTAAAATCAGGGAGAAGAGATTAGAT 58.121 37.037 0.00 0.00 31.01 1.98
494 495 7.846823 ACCTAAAATCAGGGAGAAGAGATTAGA 59.153 37.037 0.00 0.00 40.29 2.10
495 496 7.930865 CACCTAAAATCAGGGAGAAGAGATTAG 59.069 40.741 0.00 0.00 40.29 1.73
496 497 7.623677 TCACCTAAAATCAGGGAGAAGAGATTA 59.376 37.037 0.00 0.00 40.29 1.75
497 498 6.445139 TCACCTAAAATCAGGGAGAAGAGATT 59.555 38.462 0.00 0.00 40.29 2.40
498 499 5.966935 TCACCTAAAATCAGGGAGAAGAGAT 59.033 40.000 0.00 0.00 40.29 2.75
499 500 5.342017 TCACCTAAAATCAGGGAGAAGAGA 58.658 41.667 0.00 0.00 40.29 3.10
500 501 5.396213 CCTCACCTAAAATCAGGGAGAAGAG 60.396 48.000 8.40 0.00 40.29 2.85
501 502 4.471386 CCTCACCTAAAATCAGGGAGAAGA 59.529 45.833 8.40 0.00 40.29 2.87
502 503 4.384647 CCCTCACCTAAAATCAGGGAGAAG 60.385 50.000 0.00 0.00 46.23 2.85
503 504 3.523564 CCCTCACCTAAAATCAGGGAGAA 59.476 47.826 0.00 0.00 46.23 2.87
504 505 3.115390 CCCTCACCTAAAATCAGGGAGA 58.885 50.000 0.00 0.00 46.23 3.71
505 506 2.173569 CCCCTCACCTAAAATCAGGGAG 59.826 54.545 3.73 0.00 46.23 4.30
506 507 2.205342 CCCCTCACCTAAAATCAGGGA 58.795 52.381 3.73 0.00 46.23 4.20
507 508 1.923148 ACCCCTCACCTAAAATCAGGG 59.077 52.381 0.00 0.00 43.31 4.45
508 509 2.576191 TCACCCCTCACCTAAAATCAGG 59.424 50.000 0.00 0.00 41.87 3.86
509 510 3.370953 CCTCACCCCTCACCTAAAATCAG 60.371 52.174 0.00 0.00 0.00 2.90
510 511 2.576191 CCTCACCCCTCACCTAAAATCA 59.424 50.000 0.00 0.00 0.00 2.57
511 512 2.576648 ACCTCACCCCTCACCTAAAATC 59.423 50.000 0.00 0.00 0.00 2.17
512 513 2.644151 ACCTCACCCCTCACCTAAAAT 58.356 47.619 0.00 0.00 0.00 1.82
513 514 2.127651 ACCTCACCCCTCACCTAAAA 57.872 50.000 0.00 0.00 0.00 1.52
514 515 2.384375 TCTACCTCACCCCTCACCTAAA 59.616 50.000 0.00 0.00 0.00 1.85
515 516 2.005350 TCTACCTCACCCCTCACCTAA 58.995 52.381 0.00 0.00 0.00 2.69
516 517 1.690010 TCTACCTCACCCCTCACCTA 58.310 55.000 0.00 0.00 0.00 3.08
517 518 1.019650 ATCTACCTCACCCCTCACCT 58.980 55.000 0.00 0.00 0.00 4.00
518 519 1.123928 CATCTACCTCACCCCTCACC 58.876 60.000 0.00 0.00 0.00 4.02
519 520 0.466124 GCATCTACCTCACCCCTCAC 59.534 60.000 0.00 0.00 0.00 3.51
520 521 0.339859 AGCATCTACCTCACCCCTCA 59.660 55.000 0.00 0.00 0.00 3.86
521 522 1.501582 AAGCATCTACCTCACCCCTC 58.498 55.000 0.00 0.00 0.00 4.30
522 523 1.561542 CAAAGCATCTACCTCACCCCT 59.438 52.381 0.00 0.00 0.00 4.79
523 524 1.282157 ACAAAGCATCTACCTCACCCC 59.718 52.381 0.00 0.00 0.00 4.95
524 525 2.027192 TCACAAAGCATCTACCTCACCC 60.027 50.000 0.00 0.00 0.00 4.61
525 526 3.334583 TCACAAAGCATCTACCTCACC 57.665 47.619 0.00 0.00 0.00 4.02
526 527 5.182001 ACAAATCACAAAGCATCTACCTCAC 59.818 40.000 0.00 0.00 0.00 3.51
527 528 5.181811 CACAAATCACAAAGCATCTACCTCA 59.818 40.000 0.00 0.00 0.00 3.86
528 529 5.412594 TCACAAATCACAAAGCATCTACCTC 59.587 40.000 0.00 0.00 0.00 3.85
529 530 5.316167 TCACAAATCACAAAGCATCTACCT 58.684 37.500 0.00 0.00 0.00 3.08
530 531 5.627499 TCACAAATCACAAAGCATCTACC 57.373 39.130 0.00 0.00 0.00 3.18
531 532 6.034256 GCATTCACAAATCACAAAGCATCTAC 59.966 38.462 0.00 0.00 0.00 2.59
532 533 6.094719 GCATTCACAAATCACAAAGCATCTA 58.905 36.000 0.00 0.00 0.00 1.98
533 534 4.927425 GCATTCACAAATCACAAAGCATCT 59.073 37.500 0.00 0.00 0.00 2.90
534 535 4.092383 GGCATTCACAAATCACAAAGCATC 59.908 41.667 0.00 0.00 0.00 3.91
535 536 3.998341 GGCATTCACAAATCACAAAGCAT 59.002 39.130 0.00 0.00 0.00 3.79
536 537 3.181468 TGGCATTCACAAATCACAAAGCA 60.181 39.130 0.00 0.00 0.00 3.91
537 538 3.184986 GTGGCATTCACAAATCACAAAGC 59.815 43.478 0.00 0.00 45.39 3.51
538 539 3.426191 CGTGGCATTCACAAATCACAAAG 59.574 43.478 0.00 0.00 46.36 2.77
539 540 3.181482 ACGTGGCATTCACAAATCACAAA 60.181 39.130 0.00 0.00 46.36 2.83
540 541 2.360483 ACGTGGCATTCACAAATCACAA 59.640 40.909 0.00 0.00 46.36 3.33
541 542 1.952990 ACGTGGCATTCACAAATCACA 59.047 42.857 0.00 0.00 46.36 3.58
542 543 2.287547 ACACGTGGCATTCACAAATCAC 60.288 45.455 21.57 0.00 46.36 3.06
543 544 1.952990 ACACGTGGCATTCACAAATCA 59.047 42.857 21.57 0.00 46.36 2.57
544 545 2.031245 TGACACGTGGCATTCACAAATC 60.031 45.455 23.03 3.54 46.36 2.17
545 546 1.952990 TGACACGTGGCATTCACAAAT 59.047 42.857 23.03 0.00 46.36 2.32
546 547 1.383523 TGACACGTGGCATTCACAAA 58.616 45.000 23.03 0.00 46.36 2.83
547 548 1.535028 GATGACACGTGGCATTCACAA 59.465 47.619 36.07 8.22 45.42 3.33
548 549 1.155889 GATGACACGTGGCATTCACA 58.844 50.000 36.07 9.07 45.42 3.58
549 550 0.447801 GGATGACACGTGGCATTCAC 59.552 55.000 36.07 24.74 45.42 3.18
550 551 0.036022 TGGATGACACGTGGCATTCA 59.964 50.000 36.64 36.64 46.54 2.57
551 552 1.331756 GATGGATGACACGTGGCATTC 59.668 52.381 36.07 34.16 45.42 2.67
552 553 1.339920 TGATGGATGACACGTGGCATT 60.340 47.619 36.07 22.11 45.42 3.56
554 555 0.391528 CTGATGGATGACACGTGGCA 60.392 55.000 29.28 29.28 37.54 4.92
555 556 1.091771 CCTGATGGATGACACGTGGC 61.092 60.000 21.57 19.24 34.57 5.01
556 557 0.536724 TCCTGATGGATGACACGTGG 59.463 55.000 21.57 1.66 37.46 4.94
575 576 2.301296 CGGATTAGCAGATGAGACCCAT 59.699 50.000 0.00 0.00 38.43 4.00
576 577 1.688735 CGGATTAGCAGATGAGACCCA 59.311 52.381 0.00 0.00 0.00 4.51
577 578 1.689273 ACGGATTAGCAGATGAGACCC 59.311 52.381 0.00 0.00 0.00 4.46
578 579 2.362397 TCACGGATTAGCAGATGAGACC 59.638 50.000 0.00 0.00 0.00 3.85
579 580 3.316588 TCTCACGGATTAGCAGATGAGAC 59.683 47.826 0.00 0.00 38.08 3.36
580 581 3.316588 GTCTCACGGATTAGCAGATGAGA 59.683 47.826 0.00 0.00 40.09 3.27
581 582 3.551863 GGTCTCACGGATTAGCAGATGAG 60.552 52.174 0.00 0.00 35.87 2.90
582 583 2.362397 GGTCTCACGGATTAGCAGATGA 59.638 50.000 0.00 0.00 0.00 2.92
583 584 2.363680 AGGTCTCACGGATTAGCAGATG 59.636 50.000 0.00 0.00 0.00 2.90
584 585 2.363680 CAGGTCTCACGGATTAGCAGAT 59.636 50.000 0.00 0.00 0.00 2.90
585 586 1.751351 CAGGTCTCACGGATTAGCAGA 59.249 52.381 0.00 0.00 0.00 4.26
586 587 1.751351 TCAGGTCTCACGGATTAGCAG 59.249 52.381 0.00 0.00 0.00 4.24
587 588 1.847328 TCAGGTCTCACGGATTAGCA 58.153 50.000 0.00 0.00 0.00 3.49
588 589 2.625790 AGATCAGGTCTCACGGATTAGC 59.374 50.000 0.00 0.00 28.45 3.09
599 600 8.210265 GGAAAAGAATTCTATGAGATCAGGTCT 58.790 37.037 8.75 0.00 40.81 3.85
600 601 7.989741 TGGAAAAGAATTCTATGAGATCAGGTC 59.010 37.037 8.75 0.00 0.00 3.85
601 602 7.865820 TGGAAAAGAATTCTATGAGATCAGGT 58.134 34.615 8.75 0.00 0.00 4.00
602 603 8.619546 GTTGGAAAAGAATTCTATGAGATCAGG 58.380 37.037 8.75 0.00 0.00 3.86
603 604 9.170734 TGTTGGAAAAGAATTCTATGAGATCAG 57.829 33.333 8.75 0.00 0.00 2.90
604 605 9.690913 ATGTTGGAAAAGAATTCTATGAGATCA 57.309 29.630 8.75 5.00 0.00 2.92
605 606 9.947669 CATGTTGGAAAAGAATTCTATGAGATC 57.052 33.333 8.75 1.58 0.00 2.75
606 607 9.471702 ACATGTTGGAAAAGAATTCTATGAGAT 57.528 29.630 8.75 0.00 0.00 2.75
607 608 8.733458 CACATGTTGGAAAAGAATTCTATGAGA 58.267 33.333 8.75 0.00 0.00 3.27
608 609 8.906636 CACATGTTGGAAAAGAATTCTATGAG 57.093 34.615 8.75 1.44 0.00 2.90
641 642 8.343168 ACTATATAGTACTCCTGTGCTCATTC 57.657 38.462 13.88 0.00 39.73 2.67
662 663 8.526147 TCGCTTTGGTTCTACTTTAGTTACTAT 58.474 33.333 0.00 0.00 0.00 2.12
663 664 7.885297 TCGCTTTGGTTCTACTTTAGTTACTA 58.115 34.615 0.00 0.00 0.00 1.82
664 665 6.752168 TCGCTTTGGTTCTACTTTAGTTACT 58.248 36.000 0.00 0.00 0.00 2.24
665 666 6.644181 ACTCGCTTTGGTTCTACTTTAGTTAC 59.356 38.462 0.00 0.00 0.00 2.50
666 667 6.752168 ACTCGCTTTGGTTCTACTTTAGTTA 58.248 36.000 0.00 0.00 0.00 2.24
669 670 7.829378 ATTACTCGCTTTGGTTCTACTTTAG 57.171 36.000 0.00 0.00 0.00 1.85
680 681 6.677781 TTCCTTGATTATTACTCGCTTTGG 57.322 37.500 0.00 0.00 0.00 3.28
690 691 7.513371 ACGGTGTTTGTTTCCTTGATTATTA 57.487 32.000 0.00 0.00 0.00 0.98
696 697 3.118334 TCCTACGGTGTTTGTTTCCTTGA 60.118 43.478 0.00 0.00 0.00 3.02
702 703 1.202557 TCGCTCCTACGGTGTTTGTTT 60.203 47.619 0.00 0.00 0.00 2.83
715 759 1.641577 GAATAGCAACGTTCGCTCCT 58.358 50.000 22.56 14.00 40.96 3.69
738 782 0.390603 CCGCTGGGTGACAATACGAA 60.391 55.000 0.00 0.00 0.00 3.85
783 831 0.962855 GGGTTCTTGGGCAGCTTCTC 60.963 60.000 0.00 0.00 0.00 2.87
976 1081 3.499918 GCTGTTGATTACTCTGTGTGCTT 59.500 43.478 0.00 0.00 0.00 3.91
980 1085 4.456911 CCATTGCTGTTGATTACTCTGTGT 59.543 41.667 0.00 0.00 0.00 3.72
991 1104 0.895100 GCCCTCACCATTGCTGTTGA 60.895 55.000 0.00 0.00 0.00 3.18
1329 1442 0.110644 CGAGTCGCTTTTTGAGGTGC 60.111 55.000 0.00 0.00 0.00 5.01
1473 2099 2.174319 GGACTGCTCCGGCGAAATC 61.174 63.158 9.30 0.00 42.25 2.17
1549 2348 0.035725 TCCGACTCCGAGTAAGAGCA 60.036 55.000 0.00 0.00 38.22 4.26
1556 2358 0.677414 GAACTCCTCCGACTCCGAGT 60.677 60.000 0.00 0.00 37.17 4.18
1737 3171 7.977789 TTAAATCTGTGACAAACTCTGCATA 57.022 32.000 0.00 0.00 0.00 3.14
1882 3365 5.448089 CGACGAACTTTCCCTCAAAGAAAAA 60.448 40.000 1.13 0.00 44.02 1.94
1883 3366 4.034742 CGACGAACTTTCCCTCAAAGAAAA 59.965 41.667 1.13 0.00 44.02 2.29
1884 3367 3.558418 CGACGAACTTTCCCTCAAAGAAA 59.442 43.478 1.13 0.00 44.02 2.52
1885 3368 3.128349 CGACGAACTTTCCCTCAAAGAA 58.872 45.455 1.13 0.00 44.02 2.52
1886 3369 2.547218 CCGACGAACTTTCCCTCAAAGA 60.547 50.000 0.00 0.00 44.02 2.52
1887 3370 1.798813 CCGACGAACTTTCCCTCAAAG 59.201 52.381 0.00 0.00 46.36 2.77
1888 3371 1.873698 CCGACGAACTTTCCCTCAAA 58.126 50.000 0.00 0.00 0.00 2.69
1889 3372 0.601841 GCCGACGAACTTTCCCTCAA 60.602 55.000 0.00 0.00 0.00 3.02
1890 3373 1.005394 GCCGACGAACTTTCCCTCA 60.005 57.895 0.00 0.00 0.00 3.86
1891 3374 1.014564 CAGCCGACGAACTTTCCCTC 61.015 60.000 0.00 0.00 0.00 4.30
1892 3375 1.004918 CAGCCGACGAACTTTCCCT 60.005 57.895 0.00 0.00 0.00 4.20
1893 3376 1.005394 TCAGCCGACGAACTTTCCC 60.005 57.895 0.00 0.00 0.00 3.97
1894 3377 0.319641 ACTCAGCCGACGAACTTTCC 60.320 55.000 0.00 0.00 0.00 3.13
1895 3378 1.192534 CAACTCAGCCGACGAACTTTC 59.807 52.381 0.00 0.00 0.00 2.62
1896 3379 1.202486 TCAACTCAGCCGACGAACTTT 60.202 47.619 0.00 0.00 0.00 2.66
1897 3380 0.387929 TCAACTCAGCCGACGAACTT 59.612 50.000 0.00 0.00 0.00 2.66
2043 3537 3.937706 CAGACTCATCAGGCTAAAAGGTG 59.062 47.826 0.00 0.00 34.70 4.00
2077 3585 4.142038 ACGAACAAAGGATTTAGCAGGTT 58.858 39.130 0.00 0.00 35.03 3.50
2094 3604 2.096819 TGCAACTCAAGGAACAACGAAC 59.903 45.455 0.00 0.00 0.00 3.95
2131 3641 5.661056 TTGTTGGTGTTTTATCCACACAA 57.339 34.783 5.61 0.00 45.49 3.33
2160 3670 9.535170 TGTTTGGGTCATTATTCTAATTTACCA 57.465 29.630 0.00 0.00 0.00 3.25
2200 3710 7.375834 TCATACTAGTTGACGTGTGATTTTCT 58.624 34.615 0.00 0.00 0.00 2.52
2207 3717 5.458015 TGTCTTCATACTAGTTGACGTGTG 58.542 41.667 0.00 0.00 0.00 3.82
2208 3718 5.700722 TGTCTTCATACTAGTTGACGTGT 57.299 39.130 0.00 0.00 0.00 4.49
2224 3734 4.436242 TTGACAGTCGAGGTATGTCTTC 57.564 45.455 16.39 0.00 42.99 2.87
2647 4157 3.782244 CAGCAAGCTGTCGTCGCC 61.782 66.667 13.72 0.00 39.10 5.54
2648 4158 3.782244 CCAGCAAGCTGTCGTCGC 61.782 66.667 19.60 0.00 42.15 5.19
2649 4159 3.782244 GCCAGCAAGCTGTCGTCG 61.782 66.667 19.60 6.16 42.15 5.12
2650 4160 2.358003 AGCCAGCAAGCTGTCGTC 60.358 61.111 19.60 6.95 42.95 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.