Multiple sequence alignment - TraesCS6B01G248700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G248700 chr6B 100.000 4375 0 0 1 4375 446053447 446057821 0.000000e+00 8080
1 TraesCS6B01G248700 chr6A 93.027 1979 69 29 231 2181 405663764 405665701 0.000000e+00 2826
2 TraesCS6B01G248700 chr6A 91.399 872 45 12 2644 3499 405666057 405666914 0.000000e+00 1168
3 TraesCS6B01G248700 chr6A 90.743 767 57 6 3612 4375 405666922 405667677 0.000000e+00 1011
4 TraesCS6B01G248700 chr6A 96.610 177 6 0 38 214 405663603 405663779 1.190000e-75 294
5 TraesCS6B01G248700 chr6D 92.022 1780 65 26 412 2181 285183920 285185632 0.000000e+00 2429
6 TraesCS6B01G248700 chr6D 92.269 983 37 14 2644 3625 285185719 285186663 0.000000e+00 1358
7 TraesCS6B01G248700 chr6D 86.200 471 41 6 3611 4067 285382067 285382527 5.090000e-134 488
8 TraesCS6B01G248700 chr6D 92.926 311 22 0 4063 4373 285429360 285429670 1.860000e-123 453
9 TraesCS6B01G248700 chr6D 96.729 214 7 0 1 214 285183478 285183691 1.500000e-94 357
10 TraesCS6B01G248700 chr6D 94.444 162 6 1 231 392 285183676 285183834 3.380000e-61 246
11 TraesCS6B01G248700 chr6D 83.704 135 18 3 3603 3734 45201448 45201581 1.650000e-24 124
12 TraesCS6B01G248700 chr7D 78.102 274 54 6 3616 3884 393104347 393104619 7.530000e-38 169


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G248700 chr6B 446053447 446057821 4374 False 8080.00 8080 100.00000 1 4375 1 chr6B.!!$F1 4374
1 TraesCS6B01G248700 chr6A 405663603 405667677 4074 False 1324.75 2826 92.94475 38 4375 4 chr6A.!!$F1 4337
2 TraesCS6B01G248700 chr6D 285183478 285186663 3185 False 1097.50 2429 93.86600 1 3625 4 chr6D.!!$F4 3624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
203 204 0.179468 GGAAAGTGGCGGCCAGTATA 59.821 55.0 28.55 0.0 35.94 1.47 F
1165 1258 0.172803 CGCACTACCGCCTCTTAGTT 59.827 55.0 0.00 0.0 0.00 2.24 F
2295 2399 0.035152 TGTAGCTCAGGCAATGTGGG 60.035 55.0 0.00 0.0 41.70 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1348 1447 0.548682 AGCAGAAGTCCACCTCCCAT 60.549 55.0 0.0 0.0 0.0 4.00 R
2642 2746 0.033109 CTCCCTTCCCACCCCAATTC 60.033 60.0 0.0 0.0 0.0 2.17 R
4208 4332 0.117340 ATCCCTATCCCCTTCGGAGG 59.883 60.0 1.3 1.3 46.6 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 4.762251 GGGCAAGAGGATGTATATTTGGTC 59.238 45.833 0.00 0.00 0.00 4.02
200 201 3.553095 GAGGAAAGTGGCGGCCAGT 62.553 63.158 24.58 23.99 39.10 4.00
201 202 2.180159 GAGGAAAGTGGCGGCCAGTA 62.180 60.000 28.55 0.81 35.94 2.74
202 203 1.077716 GGAAAGTGGCGGCCAGTAT 60.078 57.895 28.55 14.47 35.94 2.12
203 204 0.179468 GGAAAGTGGCGGCCAGTATA 59.821 55.000 28.55 0.00 35.94 1.47
204 205 1.202770 GGAAAGTGGCGGCCAGTATAT 60.203 52.381 28.55 17.85 35.94 0.86
205 206 2.143925 GAAAGTGGCGGCCAGTATATC 58.856 52.381 28.55 21.52 35.94 1.63
206 207 1.128200 AAGTGGCGGCCAGTATATCA 58.872 50.000 28.55 0.00 35.94 2.15
207 208 0.393077 AGTGGCGGCCAGTATATCAC 59.607 55.000 27.37 10.64 35.09 3.06
208 209 0.393077 GTGGCGGCCAGTATATCACT 59.607 55.000 24.58 0.00 38.32 3.41
209 210 0.679505 TGGCGGCCAGTATATCACTC 59.320 55.000 19.77 0.00 34.26 3.51
210 211 0.969894 GGCGGCCAGTATATCACTCT 59.030 55.000 15.62 0.00 34.26 3.24
211 212 2.168496 GGCGGCCAGTATATCACTCTA 58.832 52.381 15.62 0.00 34.26 2.43
212 213 2.094649 GGCGGCCAGTATATCACTCTAC 60.095 54.545 15.62 0.00 34.26 2.59
213 214 2.557056 GCGGCCAGTATATCACTCTACA 59.443 50.000 2.24 0.00 34.26 2.74
214 215 3.612004 GCGGCCAGTATATCACTCTACAC 60.612 52.174 2.24 0.00 34.26 2.90
215 216 3.057456 CGGCCAGTATATCACTCTACACC 60.057 52.174 2.24 0.00 34.26 4.16
216 217 4.153411 GGCCAGTATATCACTCTACACCT 58.847 47.826 0.00 0.00 34.26 4.00
217 218 4.589374 GGCCAGTATATCACTCTACACCTT 59.411 45.833 0.00 0.00 34.26 3.50
218 219 5.070580 GGCCAGTATATCACTCTACACCTTT 59.929 44.000 0.00 0.00 34.26 3.11
219 220 6.408206 GGCCAGTATATCACTCTACACCTTTT 60.408 42.308 0.00 0.00 34.26 2.27
220 221 6.702282 GCCAGTATATCACTCTACACCTTTTC 59.298 42.308 0.00 0.00 34.26 2.29
221 222 6.918569 CCAGTATATCACTCTACACCTTTTCG 59.081 42.308 0.00 0.00 34.26 3.46
222 223 6.918569 CAGTATATCACTCTACACCTTTTCGG 59.081 42.308 0.00 0.00 34.26 4.30
223 224 6.832384 AGTATATCACTCTACACCTTTTCGGA 59.168 38.462 0.00 0.00 31.32 4.55
224 225 4.884668 ATCACTCTACACCTTTTCGGAA 57.115 40.909 0.00 0.00 36.31 4.30
225 226 4.675976 TCACTCTACACCTTTTCGGAAA 57.324 40.909 0.00 0.00 36.31 3.13
226 227 4.628074 TCACTCTACACCTTTTCGGAAAG 58.372 43.478 9.39 9.39 41.56 2.62
227 228 4.342951 TCACTCTACACCTTTTCGGAAAGA 59.657 41.667 18.12 0.00 44.03 2.52
228 229 5.054477 CACTCTACACCTTTTCGGAAAGAA 58.946 41.667 18.12 0.00 44.03 2.52
229 230 5.526111 CACTCTACACCTTTTCGGAAAGAAA 59.474 40.000 18.12 0.00 46.22 2.52
309 310 3.376540 CTTGCAGCTTATCTCGGAGTAC 58.623 50.000 4.69 0.00 0.00 2.73
328 329 1.678101 ACGTAGTAGGCAATCGTACCC 59.322 52.381 0.00 0.00 41.94 3.69
340 341 4.034048 GCAATCGTACCCACTAACATTCTG 59.966 45.833 0.00 0.00 0.00 3.02
404 407 4.621747 GCAGAGCACTTGGAACATACTACT 60.622 45.833 0.00 0.00 39.30 2.57
542 620 3.068873 AGGAAGCGGAGATGAACATACTC 59.931 47.826 0.00 0.00 0.00 2.59
682 760 3.773974 CGAGAGCAACGGAGAAGC 58.226 61.111 0.00 0.00 0.00 3.86
687 765 1.355066 GAGCAACGGAGAAGCGGAAG 61.355 60.000 0.00 0.00 36.17 3.46
884 976 3.934068 TCCGAGTCCACATAGGTTTTTC 58.066 45.455 0.00 0.00 39.02 2.29
896 988 3.973472 AGGTTTTTCCTCTTTGGGTCT 57.027 42.857 0.00 0.00 44.42 3.85
1165 1258 0.172803 CGCACTACCGCCTCTTAGTT 59.827 55.000 0.00 0.00 0.00 2.24
1207 1300 2.764128 TGCCGGTCCATCTCCTCC 60.764 66.667 1.90 0.00 0.00 4.30
1651 1750 2.350134 CTGCTGCTCTGGCTGGAA 59.650 61.111 0.00 0.00 37.30 3.53
1813 1912 2.510906 GGTCAGTGCCGCCCATAT 59.489 61.111 0.00 0.00 0.00 1.78
1814 1913 1.752198 GGTCAGTGCCGCCCATATA 59.248 57.895 0.00 0.00 0.00 0.86
1815 1914 0.107831 GGTCAGTGCCGCCCATATAA 59.892 55.000 0.00 0.00 0.00 0.98
1816 1915 1.271379 GGTCAGTGCCGCCCATATAAT 60.271 52.381 0.00 0.00 0.00 1.28
1817 1916 2.027561 GGTCAGTGCCGCCCATATAATA 60.028 50.000 0.00 0.00 0.00 0.98
1818 1917 3.370527 GGTCAGTGCCGCCCATATAATAT 60.371 47.826 0.00 0.00 0.00 1.28
1819 1918 4.141801 GGTCAGTGCCGCCCATATAATATA 60.142 45.833 0.00 0.00 0.00 0.86
1820 1919 5.454755 GGTCAGTGCCGCCCATATAATATAT 60.455 44.000 0.00 0.00 0.00 0.86
1821 1920 6.239487 GGTCAGTGCCGCCCATATAATATATA 60.239 42.308 0.00 0.00 0.00 0.86
1822 1921 6.645415 GTCAGTGCCGCCCATATAATATATAC 59.355 42.308 0.00 0.00 0.00 1.47
1823 1922 5.633601 CAGTGCCGCCCATATAATATATACG 59.366 44.000 0.00 0.00 0.00 3.06
1824 1923 5.537295 AGTGCCGCCCATATAATATATACGA 59.463 40.000 9.59 0.00 0.00 3.43
1825 1924 6.041182 AGTGCCGCCCATATAATATATACGAA 59.959 38.462 9.59 0.00 0.00 3.85
1826 1925 6.145048 GTGCCGCCCATATAATATATACGAAC 59.855 42.308 9.59 5.84 0.00 3.95
1827 1926 6.183360 TGCCGCCCATATAATATATACGAACA 60.183 38.462 9.59 6.30 0.00 3.18
1828 1927 6.145048 GCCGCCCATATAATATATACGAACAC 59.855 42.308 9.59 0.00 0.00 3.32
1866 1965 5.121611 CGTACCACATTTAAACATCTCTGCA 59.878 40.000 0.00 0.00 0.00 4.41
1891 1990 1.675483 TGCTGCGTTCTGATTGTGTTT 59.325 42.857 0.00 0.00 0.00 2.83
1892 1991 2.875317 TGCTGCGTTCTGATTGTGTTTA 59.125 40.909 0.00 0.00 0.00 2.01
1893 1992 3.313803 TGCTGCGTTCTGATTGTGTTTAA 59.686 39.130 0.00 0.00 0.00 1.52
1894 1993 3.908382 GCTGCGTTCTGATTGTGTTTAAG 59.092 43.478 0.00 0.00 0.00 1.85
1895 1994 4.319477 GCTGCGTTCTGATTGTGTTTAAGA 60.319 41.667 0.00 0.00 0.00 2.10
1896 1995 5.617751 GCTGCGTTCTGATTGTGTTTAAGAT 60.618 40.000 0.00 0.00 0.00 2.40
1897 1996 5.688823 TGCGTTCTGATTGTGTTTAAGATG 58.311 37.500 0.00 0.00 0.00 2.90
1898 1997 5.468409 TGCGTTCTGATTGTGTTTAAGATGA 59.532 36.000 0.00 0.00 0.00 2.92
1899 1998 6.149308 TGCGTTCTGATTGTGTTTAAGATGAT 59.851 34.615 0.00 0.00 0.00 2.45
1900 1999 6.467047 GCGTTCTGATTGTGTTTAAGATGATG 59.533 38.462 0.00 0.00 0.00 3.07
1901 2000 6.467047 CGTTCTGATTGTGTTTAAGATGATGC 59.533 38.462 0.00 0.00 0.00 3.91
1902 2001 7.533426 GTTCTGATTGTGTTTAAGATGATGCT 58.467 34.615 0.00 0.00 0.00 3.79
1903 2002 7.080353 TCTGATTGTGTTTAAGATGATGCTG 57.920 36.000 0.00 0.00 0.00 4.41
1904 2003 6.656270 TCTGATTGTGTTTAAGATGATGCTGT 59.344 34.615 0.00 0.00 0.00 4.40
1949 2048 2.052690 GCTGGAGAGGAGGTACGCA 61.053 63.158 0.00 0.00 0.00 5.24
1985 2084 2.817839 CGATTTGGACCTCTTGGGGTTT 60.818 50.000 0.00 0.00 40.06 3.27
2061 2160 1.305930 GCCTCTGGCCGGTAAGTTTG 61.306 60.000 12.43 0.00 44.06 2.93
2079 2178 5.793817 AGTTTGTGTGCTCATACTGTCATA 58.206 37.500 0.00 0.00 30.82 2.15
2080 2179 5.639506 AGTTTGTGTGCTCATACTGTCATAC 59.360 40.000 0.00 0.00 30.82 2.39
2083 2182 5.891451 TGTGTGCTCATACTGTCATACTAC 58.109 41.667 0.00 0.00 0.00 2.73
2084 2183 5.652452 TGTGTGCTCATACTGTCATACTACT 59.348 40.000 0.00 0.00 0.00 2.57
2085 2184 5.974158 GTGTGCTCATACTGTCATACTACTG 59.026 44.000 0.00 0.00 0.00 2.74
2086 2185 4.979197 GTGCTCATACTGTCATACTACTGC 59.021 45.833 0.00 0.00 0.00 4.40
2087 2186 4.889995 TGCTCATACTGTCATACTACTGCT 59.110 41.667 0.00 0.00 0.00 4.24
2088 2187 5.218885 GCTCATACTGTCATACTACTGCTG 58.781 45.833 0.00 0.00 0.00 4.41
2089 2188 5.188327 TCATACTGTCATACTACTGCTGC 57.812 43.478 0.00 0.00 0.00 5.25
2090 2189 4.889995 TCATACTGTCATACTACTGCTGCT 59.110 41.667 0.00 0.00 0.00 4.24
2091 2190 3.516981 ACTGTCATACTACTGCTGCTG 57.483 47.619 4.89 4.89 0.00 4.41
2106 2205 2.455032 CTGCTGCTACTACTACTTGCG 58.545 52.381 0.00 0.00 0.00 4.85
2150 2254 4.095610 GCGTGTGCCAAATTCAGTTATAC 58.904 43.478 0.00 0.00 33.98 1.47
2162 2266 3.359033 TCAGTTATACGGTAGCACCTGT 58.641 45.455 0.00 6.10 35.66 4.00
2165 2269 5.066893 TCAGTTATACGGTAGCACCTGTTAG 59.933 44.000 0.00 0.00 35.66 2.34
2166 2270 4.340381 AGTTATACGGTAGCACCTGTTAGG 59.660 45.833 0.00 0.00 42.49 2.69
2213 2317 6.046593 TGGTTCTGATTATAGTTAGGCAACG 58.953 40.000 0.00 0.00 46.39 4.10
2227 2331 1.462791 GCAACGAAACTTTGGTCACG 58.537 50.000 0.00 0.00 0.00 4.35
2229 2333 2.030701 GCAACGAAACTTTGGTCACGTA 59.969 45.455 0.00 0.00 36.64 3.57
2230 2334 3.600346 CAACGAAACTTTGGTCACGTAC 58.400 45.455 0.00 0.00 36.64 3.67
2231 2335 3.169355 ACGAAACTTTGGTCACGTACT 57.831 42.857 0.00 0.00 36.21 2.73
2232 2336 2.861935 ACGAAACTTTGGTCACGTACTG 59.138 45.455 0.00 0.00 36.21 2.74
2233 2337 2.348218 CGAAACTTTGGTCACGTACTGC 60.348 50.000 0.00 0.00 0.00 4.40
2234 2338 2.614829 AACTTTGGTCACGTACTGCT 57.385 45.000 0.00 0.00 0.00 4.24
2235 2339 1.865865 ACTTTGGTCACGTACTGCTG 58.134 50.000 0.00 0.00 0.00 4.41
2237 2341 2.037251 ACTTTGGTCACGTACTGCTGAT 59.963 45.455 0.00 0.00 0.00 2.90
2238 2342 3.257375 ACTTTGGTCACGTACTGCTGATA 59.743 43.478 0.00 0.00 0.00 2.15
2240 2344 2.164338 TGGTCACGTACTGCTGATACA 58.836 47.619 0.00 0.00 0.00 2.29
2241 2345 2.758423 TGGTCACGTACTGCTGATACAT 59.242 45.455 0.00 0.00 0.00 2.29
2242 2346 3.949113 TGGTCACGTACTGCTGATACATA 59.051 43.478 0.00 0.00 0.00 2.29
2243 2347 4.036380 TGGTCACGTACTGCTGATACATAG 59.964 45.833 0.00 0.00 0.00 2.23
2244 2348 4.537965 GTCACGTACTGCTGATACATAGG 58.462 47.826 0.00 0.00 0.00 2.57
2245 2349 4.275196 GTCACGTACTGCTGATACATAGGA 59.725 45.833 0.00 0.00 0.00 2.94
2246 2350 5.048643 GTCACGTACTGCTGATACATAGGAT 60.049 44.000 0.00 0.00 0.00 3.24
2247 2351 6.148976 GTCACGTACTGCTGATACATAGGATA 59.851 42.308 0.00 0.00 0.00 2.59
2249 2353 6.002082 ACGTACTGCTGATACATAGGATACA 58.998 40.000 0.00 0.00 41.41 2.29
2251 2355 7.827729 ACGTACTGCTGATACATAGGATACATA 59.172 37.037 0.00 0.00 41.41 2.29
2253 2357 9.958234 GTACTGCTGATACATAGGATACATATG 57.042 37.037 0.00 0.00 41.41 1.78
2258 2362 9.958234 GCTGATACATAGGATACATATGTAGTG 57.042 37.037 19.80 14.43 44.86 2.74
2270 2374 9.636879 GATACATATGTAGTGTCTCTAGTCGTA 57.363 37.037 19.80 0.00 33.52 3.43
2271 2375 9.993454 ATACATATGTAGTGTCTCTAGTCGTAA 57.007 33.333 19.80 0.00 33.52 3.18
2272 2376 8.367943 ACATATGTAGTGTCTCTAGTCGTAAG 57.632 38.462 6.56 0.00 0.00 2.34
2289 2393 3.932710 CGTAAGAATTGTAGCTCAGGCAA 59.067 43.478 0.00 0.00 39.96 4.52
2290 2394 4.572389 CGTAAGAATTGTAGCTCAGGCAAT 59.428 41.667 0.00 0.00 39.96 3.56
2291 2395 4.978083 AAGAATTGTAGCTCAGGCAATG 57.022 40.909 0.00 0.00 41.70 2.82
2292 2396 3.960571 AGAATTGTAGCTCAGGCAATGT 58.039 40.909 0.00 0.00 41.70 2.71
2293 2397 3.693085 AGAATTGTAGCTCAGGCAATGTG 59.307 43.478 0.00 0.00 41.70 3.21
2294 2398 1.825090 TTGTAGCTCAGGCAATGTGG 58.175 50.000 0.00 0.00 41.70 4.17
2295 2399 0.035152 TGTAGCTCAGGCAATGTGGG 60.035 55.000 0.00 0.00 41.70 4.61
2296 2400 0.253044 GTAGCTCAGGCAATGTGGGA 59.747 55.000 0.00 0.00 41.70 4.37
2303 2407 4.481870 GCAATGTGGGATTGCGTG 57.518 55.556 3.77 0.00 43.80 5.34
2304 2408 1.153784 GCAATGTGGGATTGCGTGG 60.154 57.895 3.77 0.00 43.80 4.94
2305 2409 1.876497 GCAATGTGGGATTGCGTGGT 61.876 55.000 3.77 0.00 43.80 4.16
2306 2410 1.458398 CAATGTGGGATTGCGTGGTA 58.542 50.000 0.00 0.00 0.00 3.25
2307 2411 1.815613 CAATGTGGGATTGCGTGGTAA 59.184 47.619 0.00 0.00 0.00 2.85
2308 2412 2.208132 ATGTGGGATTGCGTGGTAAA 57.792 45.000 0.00 0.00 0.00 2.01
2309 2413 2.208132 TGTGGGATTGCGTGGTAAAT 57.792 45.000 0.00 0.00 0.00 1.40
2310 2414 1.815613 TGTGGGATTGCGTGGTAAATG 59.184 47.619 0.00 0.00 0.00 2.32
2311 2415 0.814457 TGGGATTGCGTGGTAAATGC 59.186 50.000 0.00 0.00 41.57 3.56
2312 2416 1.102978 GGGATTGCGTGGTAAATGCT 58.897 50.000 0.00 0.00 41.76 3.79
2313 2417 1.202290 GGGATTGCGTGGTAAATGCTG 60.202 52.381 0.00 0.00 41.76 4.41
2314 2418 1.548986 GATTGCGTGGTAAATGCTGC 58.451 50.000 0.00 0.00 41.76 5.25
2315 2419 1.133025 GATTGCGTGGTAAATGCTGCT 59.867 47.619 0.00 0.00 41.76 4.24
2316 2420 0.958091 TTGCGTGGTAAATGCTGCTT 59.042 45.000 0.00 0.00 41.76 3.91
2318 2422 2.364632 TGCGTGGTAAATGCTGCTTAT 58.635 42.857 0.00 0.00 41.76 1.73
2319 2423 2.752354 TGCGTGGTAAATGCTGCTTATT 59.248 40.909 0.00 0.00 41.76 1.40
2321 2425 3.791353 GCGTGGTAAATGCTGCTTATTTC 59.209 43.478 0.00 0.00 37.85 2.17
2322 2426 4.351192 CGTGGTAAATGCTGCTTATTTCC 58.649 43.478 0.00 4.58 0.00 3.13
2324 2428 4.402474 GTGGTAAATGCTGCTTATTTCCCT 59.598 41.667 0.00 0.00 28.33 4.20
2325 2429 4.644685 TGGTAAATGCTGCTTATTTCCCTC 59.355 41.667 0.00 0.00 28.33 4.30
2326 2430 4.261197 GGTAAATGCTGCTTATTTCCCTCG 60.261 45.833 0.00 0.00 0.00 4.63
2327 2431 1.972872 ATGCTGCTTATTTCCCTCGG 58.027 50.000 0.00 0.00 0.00 4.63
2328 2432 0.908910 TGCTGCTTATTTCCCTCGGA 59.091 50.000 0.00 0.00 0.00 4.55
2329 2433 1.134401 TGCTGCTTATTTCCCTCGGAG 60.134 52.381 0.00 0.00 31.21 4.63
2330 2434 1.139058 GCTGCTTATTTCCCTCGGAGA 59.861 52.381 6.58 0.00 31.21 3.71
2332 2436 3.745797 GCTGCTTATTTCCCTCGGAGAAT 60.746 47.826 6.58 1.20 34.09 2.40
2336 2440 6.601332 TGCTTATTTCCCTCGGAGAATAATT 58.399 36.000 6.58 0.00 34.09 1.40
2338 2442 7.013274 TGCTTATTTCCCTCGGAGAATAATTTG 59.987 37.037 6.58 0.24 34.09 2.32
2340 2444 9.289782 CTTATTTCCCTCGGAGAATAATTTGAT 57.710 33.333 6.58 0.00 34.09 2.57
2341 2445 7.751768 ATTTCCCTCGGAGAATAATTTGATC 57.248 36.000 6.58 0.00 34.09 2.92
2342 2446 4.883083 TCCCTCGGAGAATAATTTGATCG 58.117 43.478 6.58 0.00 34.09 3.69
2345 2449 5.634020 CCCTCGGAGAATAATTTGATCGTAC 59.366 44.000 6.58 0.00 34.09 3.67
2346 2450 6.213677 CCTCGGAGAATAATTTGATCGTACA 58.786 40.000 6.58 0.00 34.09 2.90
2349 2453 8.072238 TCGGAGAATAATTTGATCGTACAATG 57.928 34.615 0.00 0.00 0.00 2.82
2350 2454 7.170828 TCGGAGAATAATTTGATCGTACAATGG 59.829 37.037 0.00 0.00 0.00 3.16
2351 2455 7.170828 CGGAGAATAATTTGATCGTACAATGGA 59.829 37.037 0.00 0.00 0.00 3.41
2384 2488 7.633193 TTTGTATGCGGACAAAGGTATTATT 57.367 32.000 10.90 0.00 42.84 1.40
2385 2489 6.612247 TGTATGCGGACAAAGGTATTATTG 57.388 37.500 0.00 0.00 0.00 1.90
2386 2490 4.568152 ATGCGGACAAAGGTATTATTGC 57.432 40.909 0.00 0.00 0.00 3.56
2387 2491 3.348119 TGCGGACAAAGGTATTATTGCA 58.652 40.909 0.00 0.00 0.00 4.08
2388 2492 3.127895 TGCGGACAAAGGTATTATTGCAC 59.872 43.478 0.00 0.00 0.00 4.57
2389 2493 3.127895 GCGGACAAAGGTATTATTGCACA 59.872 43.478 0.00 0.00 0.00 4.57
2390 2494 4.658071 CGGACAAAGGTATTATTGCACAC 58.342 43.478 0.00 0.00 0.00 3.82
2391 2495 4.438200 CGGACAAAGGTATTATTGCACACC 60.438 45.833 0.00 0.00 0.00 4.16
2392 2496 4.142249 GGACAAAGGTATTATTGCACACCC 60.142 45.833 0.00 0.00 0.00 4.61
2394 2498 4.835615 ACAAAGGTATTATTGCACACCCAA 59.164 37.500 0.00 0.00 0.00 4.12
2396 2500 6.183361 ACAAAGGTATTATTGCACACCCAAAA 60.183 34.615 0.00 0.00 0.00 2.44
2398 2502 7.726033 AAGGTATTATTGCACACCCAAAATA 57.274 32.000 0.00 0.00 0.00 1.40
2399 2503 7.726033 AGGTATTATTGCACACCCAAAATAA 57.274 32.000 0.00 0.00 0.00 1.40
2400 2504 7.781056 AGGTATTATTGCACACCCAAAATAAG 58.219 34.615 0.00 0.00 30.38 1.73
2401 2505 7.617723 AGGTATTATTGCACACCCAAAATAAGA 59.382 33.333 0.00 0.00 30.38 2.10
2402 2506 7.704899 GGTATTATTGCACACCCAAAATAAGAC 59.295 37.037 0.00 0.00 36.59 3.01
2403 2507 6.656632 TTATTGCACACCCAAAATAAGACA 57.343 33.333 0.00 0.00 0.00 3.41
2404 2508 5.543507 ATTGCACACCCAAAATAAGACAA 57.456 34.783 0.00 0.00 0.00 3.18
2405 2509 4.582701 TGCACACCCAAAATAAGACAAG 57.417 40.909 0.00 0.00 0.00 3.16
2406 2510 3.320541 TGCACACCCAAAATAAGACAAGG 59.679 43.478 0.00 0.00 0.00 3.61
2407 2511 3.572255 GCACACCCAAAATAAGACAAGGA 59.428 43.478 0.00 0.00 0.00 3.36
2409 2513 5.452636 GCACACCCAAAATAAGACAAGGAAA 60.453 40.000 0.00 0.00 0.00 3.13
2410 2514 6.215845 CACACCCAAAATAAGACAAGGAAAG 58.784 40.000 0.00 0.00 0.00 2.62
2411 2515 6.040391 CACACCCAAAATAAGACAAGGAAAGA 59.960 38.462 0.00 0.00 0.00 2.52
2412 2516 6.609616 ACACCCAAAATAAGACAAGGAAAGAA 59.390 34.615 0.00 0.00 0.00 2.52
2413 2517 7.125053 ACACCCAAAATAAGACAAGGAAAGAAA 59.875 33.333 0.00 0.00 0.00 2.52
2414 2518 7.984617 CACCCAAAATAAGACAAGGAAAGAAAA 59.015 33.333 0.00 0.00 0.00 2.29
2416 2520 8.992073 CCCAAAATAAGACAAGGAAAGAAAATG 58.008 33.333 0.00 0.00 0.00 2.32
2417 2521 8.992073 CCAAAATAAGACAAGGAAAGAAAATGG 58.008 33.333 0.00 0.00 0.00 3.16
2418 2522 9.546428 CAAAATAAGACAAGGAAAGAAAATGGT 57.454 29.630 0.00 0.00 0.00 3.55
2421 2525 9.764363 AATAAGACAAGGAAAGAAAATGGTTTC 57.236 29.630 0.00 0.00 43.05 2.78
2428 2532 4.560128 GAAAGAAAATGGTTTCCAGCCTC 58.440 43.478 0.00 0.00 43.65 4.70
2429 2533 3.532641 AGAAAATGGTTTCCAGCCTCT 57.467 42.857 0.00 0.00 43.65 3.69
2430 2534 3.160269 AGAAAATGGTTTCCAGCCTCTG 58.840 45.455 0.00 0.00 43.65 3.35
2433 2537 0.323178 ATGGTTTCCAGCCTCTGCAG 60.323 55.000 7.63 7.63 41.13 4.41
2434 2538 2.338785 GGTTTCCAGCCTCTGCAGC 61.339 63.158 9.47 0.00 41.13 5.25
2435 2539 1.601759 GTTTCCAGCCTCTGCAGCA 60.602 57.895 9.47 0.00 41.13 4.41
2437 2541 0.963856 TTTCCAGCCTCTGCAGCATG 60.964 55.000 9.47 4.63 41.13 4.06
2438 2542 2.829003 CCAGCCTCTGCAGCATGG 60.829 66.667 9.47 12.04 41.13 3.66
2439 2543 2.829003 CAGCCTCTGCAGCATGGG 60.829 66.667 9.47 9.45 41.13 4.00
2440 2544 3.013327 AGCCTCTGCAGCATGGGA 61.013 61.111 9.47 0.81 41.13 4.37
2441 2545 2.195139 GCCTCTGCAGCATGGGAT 59.805 61.111 9.47 0.00 37.47 3.85
2442 2546 1.897615 GCCTCTGCAGCATGGGATC 60.898 63.158 9.47 0.00 37.47 3.36
2443 2547 1.530283 CCTCTGCAGCATGGGATCA 59.470 57.895 9.47 0.00 35.86 2.92
2445 2549 0.468648 CTCTGCAGCATGGGATCAGA 59.531 55.000 9.47 0.00 35.86 3.27
2446 2550 0.913924 TCTGCAGCATGGGATCAGAA 59.086 50.000 9.47 0.00 35.86 3.02
2451 2555 3.948723 GCAGCATGGGATCAGAATGACG 61.949 54.545 0.00 0.00 43.79 4.35
2459 2563 2.532186 TCAGAATGACGCACACTGC 58.468 52.632 0.00 0.00 42.56 4.40
2461 2565 1.071299 AGAATGACGCACACTGCCA 59.929 52.632 0.00 0.00 41.12 4.92
2463 2567 1.066215 AGAATGACGCACACTGCCATA 60.066 47.619 0.00 0.00 41.12 2.74
2464 2568 1.062587 GAATGACGCACACTGCCATAC 59.937 52.381 0.00 0.00 41.12 2.39
2466 2570 0.250081 TGACGCACACTGCCATACAA 60.250 50.000 0.00 0.00 41.12 2.41
2467 2571 0.443869 GACGCACACTGCCATACAAG 59.556 55.000 0.00 0.00 41.12 3.16
2469 2573 1.001520 ACGCACACTGCCATACAAGTA 59.998 47.619 0.00 0.00 41.12 2.24
2470 2574 2.279741 CGCACACTGCCATACAAGTAT 58.720 47.619 0.00 0.00 41.12 2.12
2471 2575 3.118920 ACGCACACTGCCATACAAGTATA 60.119 43.478 0.00 0.00 41.12 1.47
2472 2576 3.245284 CGCACACTGCCATACAAGTATAC 59.755 47.826 0.00 0.00 41.12 1.47
2474 2578 4.634004 GCACACTGCCATACAAGTATACAA 59.366 41.667 5.50 0.00 37.42 2.41
2475 2579 5.447279 GCACACTGCCATACAAGTATACAAC 60.447 44.000 5.50 0.00 37.42 3.32
2476 2580 5.874810 CACACTGCCATACAAGTATACAACT 59.125 40.000 5.50 0.00 41.49 3.16
2477 2581 6.036083 CACACTGCCATACAAGTATACAACTC 59.964 42.308 5.50 0.00 37.50 3.01
2479 2583 6.036083 CACTGCCATACAAGTATACAACTCAC 59.964 42.308 5.50 0.00 37.50 3.51
2480 2584 6.070767 ACTGCCATACAAGTATACAACTCACT 60.071 38.462 5.50 0.00 37.50 3.41
2481 2585 7.123697 ACTGCCATACAAGTATACAACTCACTA 59.876 37.037 5.50 0.00 37.50 2.74
2482 2586 7.489160 TGCCATACAAGTATACAACTCACTAG 58.511 38.462 5.50 0.00 37.50 2.57
2483 2587 7.123697 TGCCATACAAGTATACAACTCACTAGT 59.876 37.037 5.50 0.00 37.50 2.57
2485 2589 8.904834 CCATACAAGTATACAACTCACTAGTCT 58.095 37.037 5.50 0.00 37.50 3.24
2489 2593 9.908747 ACAAGTATACAACTCACTAGTCTATCT 57.091 33.333 5.50 0.00 37.50 1.98
2497 2601 9.127277 ACAACTCACTAGTCTATCTTCTTATCC 57.873 37.037 0.00 0.00 33.75 2.59
2498 2602 9.126151 CAACTCACTAGTCTATCTTCTTATCCA 57.874 37.037 0.00 0.00 33.75 3.41
2499 2603 8.918202 ACTCACTAGTCTATCTTCTTATCCAG 57.082 38.462 0.00 0.00 0.00 3.86
2527 2631 9.830975 ATGTATAATATATGTGTGTGTGTGTGT 57.169 29.630 0.00 0.00 0.00 3.72
2528 2632 9.092876 TGTATAATATATGTGTGTGTGTGTGTG 57.907 33.333 0.00 0.00 0.00 3.82
2529 2633 9.093970 GTATAATATATGTGTGTGTGTGTGTGT 57.906 33.333 0.00 0.00 0.00 3.72
2530 2634 5.861222 ATATATGTGTGTGTGTGTGTGTG 57.139 39.130 0.00 0.00 0.00 3.82
2531 2635 1.819928 ATGTGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
2532 2636 2.457366 TGTGTGTGTGTGTGTGTGTA 57.543 45.000 0.00 0.00 0.00 2.90
2533 2637 2.342179 TGTGTGTGTGTGTGTGTGTAG 58.658 47.619 0.00 0.00 0.00 2.74
2534 2638 1.663643 GTGTGTGTGTGTGTGTGTAGG 59.336 52.381 0.00 0.00 0.00 3.18
2535 2639 1.550976 TGTGTGTGTGTGTGTGTAGGA 59.449 47.619 0.00 0.00 0.00 2.94
2536 2640 2.169561 TGTGTGTGTGTGTGTGTAGGAT 59.830 45.455 0.00 0.00 0.00 3.24
2538 2642 4.141914 TGTGTGTGTGTGTGTGTAGGATTA 60.142 41.667 0.00 0.00 0.00 1.75
2539 2643 4.812091 GTGTGTGTGTGTGTGTAGGATTAA 59.188 41.667 0.00 0.00 0.00 1.40
2541 2645 6.647481 GTGTGTGTGTGTGTGTAGGATTAATA 59.353 38.462 0.00 0.00 0.00 0.98
2542 2646 7.333423 GTGTGTGTGTGTGTGTAGGATTAATAT 59.667 37.037 0.00 0.00 0.00 1.28
2543 2647 7.547722 TGTGTGTGTGTGTGTAGGATTAATATC 59.452 37.037 0.00 0.00 0.00 1.63
2558 2662 8.525290 GGATTAATATCCTGGAAATACATGGG 57.475 38.462 0.00 0.00 45.88 4.00
2560 2664 9.178758 GATTAATATCCTGGAAATACATGGGAC 57.821 37.037 0.00 0.00 0.00 4.46
2573 2677 2.656049 TGGGACATTGGTGCACATG 58.344 52.632 20.43 16.72 37.04 3.21
2574 2678 0.178967 TGGGACATTGGTGCACATGT 60.179 50.000 19.53 19.53 37.04 3.21
2575 2679 1.074566 TGGGACATTGGTGCACATGTA 59.925 47.619 19.48 5.27 37.04 2.29
2576 2680 1.472480 GGGACATTGGTGCACATGTAC 59.528 52.381 19.57 19.57 37.04 2.90
2583 2687 1.616159 GGTGCACATGTACCCAAACT 58.384 50.000 20.43 0.00 43.79 2.66
2584 2688 1.269448 GGTGCACATGTACCCAAACTG 59.731 52.381 20.43 0.00 43.79 3.16
2585 2689 2.226330 GTGCACATGTACCCAAACTGA 58.774 47.619 13.17 0.00 0.00 3.41
2586 2690 2.621055 GTGCACATGTACCCAAACTGAA 59.379 45.455 13.17 0.00 0.00 3.02
2587 2691 3.067461 GTGCACATGTACCCAAACTGAAA 59.933 43.478 13.17 0.00 0.00 2.69
2588 2692 3.701542 TGCACATGTACCCAAACTGAAAA 59.298 39.130 0.00 0.00 0.00 2.29
2589 2693 4.160439 TGCACATGTACCCAAACTGAAAAA 59.840 37.500 0.00 0.00 0.00 1.94
2590 2694 4.506288 GCACATGTACCCAAACTGAAAAAC 59.494 41.667 0.00 0.00 0.00 2.43
2591 2695 5.655488 CACATGTACCCAAACTGAAAAACA 58.345 37.500 0.00 0.00 0.00 2.83
2592 2696 6.102663 CACATGTACCCAAACTGAAAAACAA 58.897 36.000 0.00 0.00 0.00 2.83
2593 2697 6.591834 CACATGTACCCAAACTGAAAAACAAA 59.408 34.615 0.00 0.00 0.00 2.83
2594 2698 7.118390 CACATGTACCCAAACTGAAAAACAAAA 59.882 33.333 0.00 0.00 0.00 2.44
2595 2699 7.826744 ACATGTACCCAAACTGAAAAACAAAAT 59.173 29.630 0.00 0.00 0.00 1.82
2596 2700 9.319143 CATGTACCCAAACTGAAAAACAAAATA 57.681 29.630 0.00 0.00 0.00 1.40
2598 2702 9.535878 TGTACCCAAACTGAAAAACAAAATATC 57.464 29.630 0.00 0.00 0.00 1.63
2599 2703 9.535878 GTACCCAAACTGAAAAACAAAATATCA 57.464 29.630 0.00 0.00 0.00 2.15
2601 2705 9.454859 ACCCAAACTGAAAAACAAAATATCAAA 57.545 25.926 0.00 0.00 0.00 2.69
2631 2735 4.601406 AAAATGTGGGGCTATAAGGTCA 57.399 40.909 0.00 0.00 0.00 4.02
2632 2736 3.577805 AATGTGGGGCTATAAGGTCAC 57.422 47.619 0.00 0.00 0.00 3.67
2633 2737 1.209621 TGTGGGGCTATAAGGTCACC 58.790 55.000 0.00 0.00 0.00 4.02
2634 2738 1.209621 GTGGGGCTATAAGGTCACCA 58.790 55.000 0.00 0.00 0.00 4.17
2635 2739 1.562475 GTGGGGCTATAAGGTCACCAA 59.438 52.381 0.00 0.00 0.00 3.67
2636 2740 2.025699 GTGGGGCTATAAGGTCACCAAA 60.026 50.000 0.00 0.00 0.00 3.28
2637 2741 2.856231 TGGGGCTATAAGGTCACCAAAT 59.144 45.455 0.00 0.00 0.00 2.32
2638 2742 3.270960 TGGGGCTATAAGGTCACCAAATT 59.729 43.478 0.00 0.00 0.00 1.82
2639 2743 4.479056 TGGGGCTATAAGGTCACCAAATTA 59.521 41.667 0.00 0.00 0.00 1.40
2640 2744 5.044030 TGGGGCTATAAGGTCACCAAATTAA 60.044 40.000 0.00 0.00 0.00 1.40
2641 2745 5.535030 GGGGCTATAAGGTCACCAAATTAAG 59.465 44.000 0.00 0.00 0.00 1.85
2642 2746 5.535030 GGGCTATAAGGTCACCAAATTAAGG 59.465 44.000 0.00 0.00 0.00 2.69
2648 2752 6.358974 AAGGTCACCAAATTAAGGAATTGG 57.641 37.500 0.00 2.38 35.38 3.16
2660 2764 1.514864 GGAATTGGGGTGGGAAGGGA 61.515 60.000 0.00 0.00 0.00 4.20
2668 2772 1.709115 GGGTGGGAAGGGAGTAGTTTT 59.291 52.381 0.00 0.00 0.00 2.43
2690 2794 8.721478 GTTTTAAGAGTCTGATAACATTCAGCA 58.279 33.333 6.07 0.00 42.37 4.41
2794 2908 4.707105 TCCATGTTGCGTCAGATGAATAT 58.293 39.130 0.00 0.00 0.00 1.28
2795 2909 5.125356 TCCATGTTGCGTCAGATGAATATT 58.875 37.500 0.00 0.00 0.00 1.28
2796 2910 5.237127 TCCATGTTGCGTCAGATGAATATTC 59.763 40.000 8.60 8.60 0.00 1.75
2797 2911 5.237996 CCATGTTGCGTCAGATGAATATTCT 59.762 40.000 16.24 2.41 0.00 2.40
2798 2912 5.723492 TGTTGCGTCAGATGAATATTCTG 57.277 39.130 16.24 6.77 41.61 3.02
2799 2913 5.418676 TGTTGCGTCAGATGAATATTCTGA 58.581 37.500 16.24 9.00 45.53 3.27
2805 2919 5.473066 TCAGATGAATATTCTGATGGCGA 57.527 39.130 16.24 2.12 43.49 5.54
2806 2920 6.046290 TCAGATGAATATTCTGATGGCGAT 57.954 37.500 16.24 0.00 43.49 4.58
2807 2921 7.174107 TCAGATGAATATTCTGATGGCGATA 57.826 36.000 16.24 0.00 43.49 2.92
2808 2922 7.263496 TCAGATGAATATTCTGATGGCGATAG 58.737 38.462 16.24 0.00 43.49 2.08
2809 2923 7.040494 CAGATGAATATTCTGATGGCGATAGT 58.960 38.462 16.24 0.00 42.63 2.12
2810 2924 7.222417 CAGATGAATATTCTGATGGCGATAGTC 59.778 40.741 16.24 0.00 42.63 2.59
2910 3024 7.119553 AGCTCTGAGATCTTTGTTTCTTCAATC 59.880 37.037 9.28 0.00 0.00 2.67
3012 3126 4.831710 GGGGTTTCTACCAGATACGTCTAT 59.168 45.833 0.00 0.00 46.96 1.98
3196 3310 2.558554 ATCTGGGTAGCGCGTGTGTC 62.559 60.000 8.43 0.00 0.00 3.67
3199 3313 3.170585 GGTAGCGCGTGTGTCGTC 61.171 66.667 8.43 0.00 42.13 4.20
3207 3321 0.944311 GCGTGTGTCGTCACTTCCAT 60.944 55.000 13.77 0.00 44.14 3.41
3208 3322 1.060713 CGTGTGTCGTCACTTCCATC 58.939 55.000 13.77 0.00 44.14 3.51
3379 3499 8.439993 AAAGAAAGAAGAGTTTAGTCCACTTC 57.560 34.615 0.00 0.00 37.71 3.01
3389 3509 2.005370 AGTCCACTTCTCCGTTGGTA 57.995 50.000 0.00 0.00 0.00 3.25
3469 3590 5.855045 AGGTACCACAGACTGAAGTTTTAG 58.145 41.667 15.94 0.00 0.00 1.85
3505 3626 4.989279 GAGCATCTCTATCTGATCCCTC 57.011 50.000 0.00 0.00 0.00 4.30
3506 3627 4.343231 GAGCATCTCTATCTGATCCCTCA 58.657 47.826 0.00 0.00 0.00 3.86
3533 3654 7.981475 ATTTAGTCTCTTATATAGCCCCTCC 57.019 40.000 0.00 0.00 0.00 4.30
3560 3681 8.323567 TCCTTTAACTCCTTATATTTGTTCCGT 58.676 33.333 0.00 0.00 0.00 4.69
3620 3741 5.211973 TCTATCCTCACATGTAAGCCTCTT 58.788 41.667 0.00 0.00 0.00 2.85
3632 3753 0.120172 AGCCTCTTCCCCTTCTTCCT 59.880 55.000 0.00 0.00 0.00 3.36
3643 3764 2.916269 CCCTTCTTCCTTCTTCCTCCTT 59.084 50.000 0.00 0.00 0.00 3.36
3699 3820 6.610830 AGATGATATCCATGAGCTAACTAGGG 59.389 42.308 0.00 0.00 35.17 3.53
3708 3829 3.661161 TGAGCTAACTAGGGCCTAGGATA 59.339 47.826 36.98 28.02 38.30 2.59
3715 3836 2.246091 AGGGCCTAGGATAGATGCTC 57.754 55.000 14.75 0.00 42.77 4.26
3745 3866 9.533831 AAAAGTAATTTGATACAATCTCACCCT 57.466 29.630 0.00 0.00 0.00 4.34
3809 3930 3.726557 ATTCTTCCTCCATGAGCAACA 57.273 42.857 0.00 0.00 0.00 3.33
3825 3946 4.022512 GCAACAACTTTGCGTTTATTCG 57.977 40.909 0.00 0.00 35.58 3.34
3850 3971 0.546598 ATGGGTTCTTCCGTCCATCC 59.453 55.000 0.00 0.00 35.26 3.51
3858 3979 1.137872 CTTCCGTCCATCCTTCTCCTG 59.862 57.143 0.00 0.00 0.00 3.86
3864 3985 1.153289 CATCCTTCTCCTGGTGGCG 60.153 63.158 0.00 0.00 0.00 5.69
3884 4005 0.528924 CGATAGTGTGGTCCGGAACA 59.471 55.000 20.95 20.95 0.00 3.18
3885 4006 1.067425 CGATAGTGTGGTCCGGAACAA 60.067 52.381 27.07 9.35 0.00 2.83
3887 4008 3.404899 GATAGTGTGGTCCGGAACAAAA 58.595 45.455 27.07 13.50 0.00 2.44
3888 4009 1.385528 AGTGTGGTCCGGAACAAAAC 58.614 50.000 27.07 24.63 0.00 2.43
3936 4057 4.049393 GCACCTTTGCTCGTGACT 57.951 55.556 0.00 0.00 46.17 3.41
3944 4066 0.904649 TTGCTCGTGACTGGGATGAT 59.095 50.000 0.00 0.00 0.00 2.45
3951 4073 1.133976 GTGACTGGGATGATGGAAGGG 60.134 57.143 0.00 0.00 0.00 3.95
3995 4119 6.128117 CGATGGAAAGGACGAAAAATAAAGGA 60.128 38.462 0.00 0.00 0.00 3.36
4020 4144 6.575083 AAAATATCGTCACAATCTCGTCAG 57.425 37.500 0.00 0.00 0.00 3.51
4032 4156 4.819105 ATCTCGTCAGAATTTGGTGGTA 57.181 40.909 0.00 0.00 30.24 3.25
4050 4174 4.357947 GAGGTCGACGGTGCTGCA 62.358 66.667 9.92 0.00 0.00 4.41
4117 4241 4.100084 CTGGAGTGGATGCGGCCA 62.100 66.667 2.24 0.00 35.02 5.36
4140 4264 0.255890 GGTGGGCAAGAATAGAGGCA 59.744 55.000 0.00 0.00 0.00 4.75
4186 4310 6.187727 TGCTGAGGAGTAAATATAAAGGGG 57.812 41.667 0.00 0.00 0.00 4.79
4208 4332 2.125685 GAGCGGCCGATACTTTTACTC 58.874 52.381 33.48 18.40 0.00 2.59
4209 4333 1.202498 AGCGGCCGATACTTTTACTCC 60.202 52.381 33.48 5.79 0.00 3.85
4263 4387 5.224888 GTTTAACCCCTCAAAACCGATTTC 58.775 41.667 0.00 0.00 0.00 2.17
4277 4401 7.535489 AAACCGATTTCTTATTCCTCTAACG 57.465 36.000 0.00 0.00 0.00 3.18
4279 4403 6.271566 ACCGATTTCTTATTCCTCTAACGAC 58.728 40.000 0.00 0.00 0.00 4.34
4282 4406 7.167801 CCGATTTCTTATTCCTCTAACGACTTC 59.832 40.741 0.00 0.00 0.00 3.01
4297 4421 6.696441 AACGACTTCTAAAGGATCGACTAT 57.304 37.500 6.69 0.00 36.64 2.12
4320 4444 9.244292 CTATAGATGTCTAATGCCCAACTAGTA 57.756 37.037 0.00 0.00 31.39 1.82
4321 4445 6.808321 AGATGTCTAATGCCCAACTAGTAA 57.192 37.500 0.00 0.00 0.00 2.24
4322 4446 6.821388 AGATGTCTAATGCCCAACTAGTAAG 58.179 40.000 0.00 0.00 0.00 2.34
4323 4447 5.353394 TGTCTAATGCCCAACTAGTAAGG 57.647 43.478 0.00 0.67 0.00 2.69
4324 4448 4.781087 TGTCTAATGCCCAACTAGTAAGGT 59.219 41.667 11.65 0.00 0.00 3.50
4325 4449 5.959594 TGTCTAATGCCCAACTAGTAAGGTA 59.040 40.000 11.65 8.30 0.00 3.08
4326 4450 6.127253 TGTCTAATGCCCAACTAGTAAGGTAC 60.127 42.308 11.65 5.62 0.00 3.34
4327 4451 5.959594 TCTAATGCCCAACTAGTAAGGTACA 59.040 40.000 11.65 10.03 0.00 2.90
4328 4452 5.710409 AATGCCCAACTAGTAAGGTACAT 57.290 39.130 11.65 11.47 0.00 2.29
4338 4462 9.193133 CAACTAGTAAGGTACATATACACATGC 57.807 37.037 0.00 0.00 32.40 4.06
4343 4467 8.428852 AGTAAGGTACATATACACATGCAATCA 58.571 33.333 0.00 0.00 32.40 2.57
4349 4473 1.085893 TACACATGCAATCAGTGGCG 58.914 50.000 13.91 0.00 37.58 5.69
4350 4474 1.138036 CACATGCAATCAGTGGCGG 59.862 57.895 0.00 0.00 0.00 6.13
4368 4492 1.211949 CGGAGGCAGGATTCCCTAAAA 59.788 52.381 0.00 0.00 42.02 1.52
4369 4493 2.158608 CGGAGGCAGGATTCCCTAAAAT 60.159 50.000 0.00 0.00 42.02 1.82
4370 4494 3.491342 GGAGGCAGGATTCCCTAAAATC 58.509 50.000 0.00 0.00 42.02 2.17
4371 4495 3.139211 GGAGGCAGGATTCCCTAAAATCT 59.861 47.826 0.00 0.00 42.02 2.40
4372 4496 4.393834 GAGGCAGGATTCCCTAAAATCTC 58.606 47.826 0.00 0.00 42.02 2.75
4373 4497 3.788142 AGGCAGGATTCCCTAAAATCTCA 59.212 43.478 0.00 0.00 42.02 3.27
4374 4498 3.885901 GGCAGGATTCCCTAAAATCTCAC 59.114 47.826 0.00 0.00 42.02 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.392998 AGCCAAGCACTAACCATCCG 60.393 55.000 0.00 0.00 0.00 4.18
60 61 2.043526 ACATCCTCTTGCCCATCCTTTT 59.956 45.455 0.00 0.00 0.00 2.27
200 201 7.649533 TTCCGAAAAGGTGTAGAGTGATATA 57.350 36.000 0.00 0.00 41.99 0.86
201 202 6.540438 TTCCGAAAAGGTGTAGAGTGATAT 57.460 37.500 0.00 0.00 41.99 1.63
202 203 5.988310 TTCCGAAAAGGTGTAGAGTGATA 57.012 39.130 0.00 0.00 41.99 2.15
203 204 4.884668 TTCCGAAAAGGTGTAGAGTGAT 57.115 40.909 0.00 0.00 41.99 3.06
204 205 4.342951 TCTTTCCGAAAAGGTGTAGAGTGA 59.657 41.667 0.00 0.00 41.88 3.41
205 206 4.628074 TCTTTCCGAAAAGGTGTAGAGTG 58.372 43.478 0.00 0.00 41.88 3.51
206 207 4.950205 TCTTTCCGAAAAGGTGTAGAGT 57.050 40.909 0.00 0.00 41.88 3.24
207 208 6.613755 TTTTCTTTCCGAAAAGGTGTAGAG 57.386 37.500 0.00 0.00 44.42 2.43
216 217 9.720769 AGAGTGATATACTTTTCTTTCCGAAAA 57.279 29.630 0.00 0.00 46.43 2.29
218 219 9.798994 GTAGAGTGATATACTTTTCTTTCCGAA 57.201 33.333 0.00 0.00 40.53 4.30
219 220 8.963725 TGTAGAGTGATATACTTTTCTTTCCGA 58.036 33.333 0.00 0.00 40.53 4.55
220 221 9.582431 TTGTAGAGTGATATACTTTTCTTTCCG 57.418 33.333 0.00 0.00 40.53 4.30
309 310 1.677576 TGGGTACGATTGCCTACTACG 59.322 52.381 0.00 0.00 0.00 3.51
404 407 8.827177 AAATCGTTTTGTGATACTTCTCTGTA 57.173 30.769 0.00 0.00 0.00 2.74
510 588 0.603707 TCCGCTTCCTGCTTCACTTG 60.604 55.000 0.00 0.00 40.11 3.16
511 589 0.321122 CTCCGCTTCCTGCTTCACTT 60.321 55.000 0.00 0.00 40.11 3.16
555 633 1.301716 GCTCTGCTTCGGGTTCACA 60.302 57.895 0.00 0.00 0.00 3.58
556 634 1.294659 CTGCTCTGCTTCGGGTTCAC 61.295 60.000 0.00 0.00 0.00 3.18
591 669 3.256558 TCACATCGATTCACTCTTGCTG 58.743 45.455 0.00 0.00 0.00 4.41
884 976 1.338769 CCCACGTAAGACCCAAAGAGG 60.339 57.143 0.00 0.00 43.62 3.69
985 1078 1.808891 GCTAACGTTGGTGGTGTCAGT 60.809 52.381 11.99 0.00 0.00 3.41
986 1079 0.865769 GCTAACGTTGGTGGTGTCAG 59.134 55.000 11.99 0.00 0.00 3.51
987 1080 0.466543 AGCTAACGTTGGTGGTGTCA 59.533 50.000 11.99 0.00 0.00 3.58
988 1081 1.529865 GAAGCTAACGTTGGTGGTGTC 59.470 52.381 11.99 0.00 0.00 3.67
989 1082 1.140252 AGAAGCTAACGTTGGTGGTGT 59.860 47.619 11.99 0.00 0.00 4.16
990 1083 1.531149 CAGAAGCTAACGTTGGTGGTG 59.469 52.381 11.99 1.29 0.00 4.17
991 1084 1.140252 ACAGAAGCTAACGTTGGTGGT 59.860 47.619 11.99 3.89 0.00 4.16
992 1085 1.531149 CACAGAAGCTAACGTTGGTGG 59.469 52.381 11.99 0.00 0.00 4.61
993 1086 2.032894 CACACAGAAGCTAACGTTGGTG 60.033 50.000 11.99 4.73 0.00 4.17
1250 1343 3.535962 CTCGGCTGGCTCCTCCTC 61.536 72.222 0.00 0.00 35.26 3.71
1269 1362 1.202580 CCACATCATCCTCCTCGTTCC 60.203 57.143 0.00 0.00 0.00 3.62
1348 1447 0.548682 AGCAGAAGTCCACCTCCCAT 60.549 55.000 0.00 0.00 0.00 4.00
1720 1819 2.112297 GTGGCGAAGGGGTTGTCA 59.888 61.111 0.00 0.00 0.00 3.58
1814 1913 9.796180 AGTAGAGAGGAAGTGTTCGTATATATT 57.204 33.333 0.00 0.00 0.00 1.28
1816 1915 9.703892 GTAGTAGAGAGGAAGTGTTCGTATATA 57.296 37.037 0.00 0.00 0.00 0.86
1817 1916 7.384660 CGTAGTAGAGAGGAAGTGTTCGTATAT 59.615 40.741 0.00 0.00 0.00 0.86
1818 1917 6.699204 CGTAGTAGAGAGGAAGTGTTCGTATA 59.301 42.308 0.00 0.00 0.00 1.47
1819 1918 5.523188 CGTAGTAGAGAGGAAGTGTTCGTAT 59.477 44.000 0.00 0.00 0.00 3.06
1820 1919 4.867047 CGTAGTAGAGAGGAAGTGTTCGTA 59.133 45.833 0.00 0.00 0.00 3.43
1821 1920 3.683822 CGTAGTAGAGAGGAAGTGTTCGT 59.316 47.826 0.00 0.00 0.00 3.85
1822 1921 3.683822 ACGTAGTAGAGAGGAAGTGTTCG 59.316 47.826 0.00 0.00 41.94 3.95
1866 1965 3.737266 CACAATCAGAACGCAGCAATTTT 59.263 39.130 0.00 0.00 0.00 1.82
1877 1976 7.484007 CAGCATCATCTTAAACACAATCAGAAC 59.516 37.037 0.00 0.00 0.00 3.01
1891 1990 5.981174 TCACATCTGAACAGCATCATCTTA 58.019 37.500 0.00 0.00 0.00 2.10
1892 1991 4.840271 TCACATCTGAACAGCATCATCTT 58.160 39.130 0.00 0.00 0.00 2.40
1893 1992 4.443621 CTCACATCTGAACAGCATCATCT 58.556 43.478 0.00 0.00 0.00 2.90
1894 1993 3.560481 CCTCACATCTGAACAGCATCATC 59.440 47.826 0.00 0.00 0.00 2.92
1895 1994 3.542648 CCTCACATCTGAACAGCATCAT 58.457 45.455 0.00 0.00 0.00 2.45
1896 1995 2.355412 CCCTCACATCTGAACAGCATCA 60.355 50.000 0.00 0.00 0.00 3.07
1897 1996 2.093288 TCCCTCACATCTGAACAGCATC 60.093 50.000 0.00 0.00 0.00 3.91
1898 1997 1.911357 TCCCTCACATCTGAACAGCAT 59.089 47.619 0.00 0.00 0.00 3.79
1899 1998 1.277273 CTCCCTCACATCTGAACAGCA 59.723 52.381 0.00 0.00 0.00 4.41
1900 1999 1.406614 CCTCCCTCACATCTGAACAGC 60.407 57.143 0.00 0.00 0.00 4.40
1901 2000 2.168106 CTCCTCCCTCACATCTGAACAG 59.832 54.545 0.00 0.00 0.00 3.16
1902 2001 2.182827 CTCCTCCCTCACATCTGAACA 58.817 52.381 0.00 0.00 0.00 3.18
1903 2002 1.484240 CCTCCTCCCTCACATCTGAAC 59.516 57.143 0.00 0.00 0.00 3.18
1904 2003 1.079490 ACCTCCTCCCTCACATCTGAA 59.921 52.381 0.00 0.00 0.00 3.02
1985 2084 1.014044 GCGTGGTTTCATCGAGCTCA 61.014 55.000 15.40 1.08 0.00 4.26
2061 2160 5.974158 CAGTAGTATGACAGTATGAGCACAC 59.026 44.000 0.00 0.00 39.69 3.82
2079 2178 2.729194 AGTAGTAGCAGCAGCAGTAGT 58.271 47.619 3.17 0.00 45.49 2.73
2080 2179 3.880490 AGTAGTAGTAGCAGCAGCAGTAG 59.120 47.826 3.17 0.00 45.49 2.57
2083 2182 3.443037 CAAGTAGTAGTAGCAGCAGCAG 58.557 50.000 3.17 0.00 45.49 4.24
2084 2183 2.417379 GCAAGTAGTAGTAGCAGCAGCA 60.417 50.000 3.17 0.00 45.49 4.41
2085 2184 2.197577 GCAAGTAGTAGTAGCAGCAGC 58.802 52.381 0.00 0.00 42.56 5.25
2086 2185 2.455032 CGCAAGTAGTAGTAGCAGCAG 58.545 52.381 0.00 0.00 0.00 4.24
2087 2186 1.134367 CCGCAAGTAGTAGTAGCAGCA 59.866 52.381 0.00 0.00 0.00 4.41
2088 2187 1.404391 TCCGCAAGTAGTAGTAGCAGC 59.596 52.381 0.00 0.00 0.00 5.25
2089 2188 2.943690 TCTCCGCAAGTAGTAGTAGCAG 59.056 50.000 0.00 0.00 0.00 4.24
2090 2189 2.995283 TCTCCGCAAGTAGTAGTAGCA 58.005 47.619 0.00 0.00 0.00 3.49
2091 2190 5.686159 TTATCTCCGCAAGTAGTAGTAGC 57.314 43.478 0.00 0.00 0.00 3.58
2106 2205 6.929606 ACGCTTACATCTAACCAATTATCTCC 59.070 38.462 0.00 0.00 0.00 3.71
2182 2286 8.902806 CCTAACTATAATCAGAACCATGCAAAA 58.097 33.333 0.00 0.00 0.00 2.44
2183 2287 7.013274 GCCTAACTATAATCAGAACCATGCAAA 59.987 37.037 0.00 0.00 0.00 3.68
2184 2288 6.486657 GCCTAACTATAATCAGAACCATGCAA 59.513 38.462 0.00 0.00 0.00 4.08
2185 2289 5.997746 GCCTAACTATAATCAGAACCATGCA 59.002 40.000 0.00 0.00 0.00 3.96
2186 2290 5.997746 TGCCTAACTATAATCAGAACCATGC 59.002 40.000 0.00 0.00 0.00 4.06
2187 2291 7.307396 CGTTGCCTAACTATAATCAGAACCATG 60.307 40.741 0.00 0.00 34.60 3.66
2188 2292 6.706270 CGTTGCCTAACTATAATCAGAACCAT 59.294 38.462 0.00 0.00 34.60 3.55
2189 2293 6.046593 CGTTGCCTAACTATAATCAGAACCA 58.953 40.000 0.00 0.00 34.60 3.67
2200 2304 5.067954 ACCAAAGTTTCGTTGCCTAACTAT 58.932 37.500 0.00 0.00 34.60 2.12
2213 2317 2.870411 AGCAGTACGTGACCAAAGTTTC 59.130 45.455 0.00 0.00 0.00 2.78
2227 2331 9.958234 CATATGTATCCTATGTATCAGCAGTAC 57.042 37.037 0.00 0.00 0.00 2.73
2229 2333 8.601047 ACATATGTATCCTATGTATCAGCAGT 57.399 34.615 6.56 0.00 37.89 4.40
2231 2335 9.700831 ACTACATATGTATCCTATGTATCAGCA 57.299 33.333 15.81 0.00 39.86 4.41
2232 2336 9.958234 CACTACATATGTATCCTATGTATCAGC 57.042 37.037 15.81 0.00 39.86 4.26
2242 2346 7.820386 CGACTAGAGACACTACATATGTATCCT 59.180 40.741 15.81 10.20 38.75 3.24
2243 2347 7.603404 ACGACTAGAGACACTACATATGTATCC 59.397 40.741 15.81 6.06 38.75 2.59
2244 2348 8.537049 ACGACTAGAGACACTACATATGTATC 57.463 38.462 15.81 10.80 38.34 2.24
2245 2349 9.993454 TTACGACTAGAGACACTACATATGTAT 57.007 33.333 15.81 1.55 0.00 2.29
2246 2350 9.473640 CTTACGACTAGAGACACTACATATGTA 57.526 37.037 14.75 14.75 0.00 2.29
2247 2351 8.202811 TCTTACGACTAGAGACACTACATATGT 58.797 37.037 13.93 13.93 0.00 2.29
2249 2353 9.781633 ATTCTTACGACTAGAGACACTACATAT 57.218 33.333 0.00 0.00 0.00 1.78
2251 2355 8.399425 CAATTCTTACGACTAGAGACACTACAT 58.601 37.037 0.00 0.00 0.00 2.29
2253 2357 7.750769 ACAATTCTTACGACTAGAGACACTAC 58.249 38.462 0.00 0.00 0.00 2.73
2256 2360 6.687958 GCTACAATTCTTACGACTAGAGACAC 59.312 42.308 0.00 0.00 0.00 3.67
2258 2362 7.018635 AGCTACAATTCTTACGACTAGAGAC 57.981 40.000 0.00 0.00 0.00 3.36
2260 2364 7.017498 TGAGCTACAATTCTTACGACTAGAG 57.983 40.000 0.00 0.00 0.00 2.43
2261 2365 6.038382 CCTGAGCTACAATTCTTACGACTAGA 59.962 42.308 0.00 0.00 0.00 2.43
2262 2366 6.202937 CCTGAGCTACAATTCTTACGACTAG 58.797 44.000 0.00 0.00 0.00 2.57
2265 2369 3.552294 GCCTGAGCTACAATTCTTACGAC 59.448 47.826 0.00 0.00 35.50 4.34
2266 2370 3.194755 TGCCTGAGCTACAATTCTTACGA 59.805 43.478 0.00 0.00 40.80 3.43
2267 2371 3.521560 TGCCTGAGCTACAATTCTTACG 58.478 45.455 0.00 0.00 40.80 3.18
2270 2374 4.157289 CACATTGCCTGAGCTACAATTCTT 59.843 41.667 0.00 0.00 40.80 2.52
2271 2375 3.693085 CACATTGCCTGAGCTACAATTCT 59.307 43.478 0.00 0.00 40.80 2.40
2272 2376 3.181493 CCACATTGCCTGAGCTACAATTC 60.181 47.826 0.00 0.00 40.80 2.17
2273 2377 2.756760 CCACATTGCCTGAGCTACAATT 59.243 45.455 0.00 0.00 40.80 2.32
2274 2378 2.372264 CCACATTGCCTGAGCTACAAT 58.628 47.619 0.00 0.00 40.80 2.71
2275 2379 1.614051 CCCACATTGCCTGAGCTACAA 60.614 52.381 0.00 0.00 40.80 2.41
2276 2380 0.035152 CCCACATTGCCTGAGCTACA 60.035 55.000 0.00 0.00 40.80 2.74
2278 2382 1.216064 ATCCCACATTGCCTGAGCTA 58.784 50.000 0.00 0.00 40.80 3.32
2281 2385 0.458669 GCAATCCCACATTGCCTGAG 59.541 55.000 7.91 0.00 46.21 3.35
2282 2386 2.582272 GCAATCCCACATTGCCTGA 58.418 52.632 7.91 0.00 46.21 3.86
2289 2393 2.208132 TTTACCACGCAATCCCACAT 57.792 45.000 0.00 0.00 0.00 3.21
2290 2394 1.815613 CATTTACCACGCAATCCCACA 59.184 47.619 0.00 0.00 0.00 4.17
2291 2395 1.469079 GCATTTACCACGCAATCCCAC 60.469 52.381 0.00 0.00 0.00 4.61
2292 2396 0.814457 GCATTTACCACGCAATCCCA 59.186 50.000 0.00 0.00 0.00 4.37
2293 2397 1.102978 AGCATTTACCACGCAATCCC 58.897 50.000 0.00 0.00 0.00 3.85
2294 2398 1.798813 GCAGCATTTACCACGCAATCC 60.799 52.381 0.00 0.00 0.00 3.01
2295 2399 1.133025 AGCAGCATTTACCACGCAATC 59.867 47.619 0.00 0.00 0.00 2.67
2296 2400 1.176527 AGCAGCATTTACCACGCAAT 58.823 45.000 0.00 0.00 0.00 3.56
2300 2404 4.351192 GGAAATAAGCAGCATTTACCACG 58.649 43.478 0.00 0.00 0.00 4.94
2301 2405 4.402474 AGGGAAATAAGCAGCATTTACCAC 59.598 41.667 17.83 0.00 45.40 4.16
2302 2406 4.609301 AGGGAAATAAGCAGCATTTACCA 58.391 39.130 17.83 0.00 45.40 3.25
2303 2407 4.261197 CGAGGGAAATAAGCAGCATTTACC 60.261 45.833 10.39 10.39 43.94 2.85
2304 2408 4.261197 CCGAGGGAAATAAGCAGCATTTAC 60.261 45.833 0.00 0.00 0.00 2.01
2305 2409 3.882888 CCGAGGGAAATAAGCAGCATTTA 59.117 43.478 0.00 0.00 0.00 1.40
2306 2410 2.689983 CCGAGGGAAATAAGCAGCATTT 59.310 45.455 0.00 0.00 0.00 2.32
2307 2411 2.092429 TCCGAGGGAAATAAGCAGCATT 60.092 45.455 0.00 0.00 0.00 3.56
2308 2412 1.490490 TCCGAGGGAAATAAGCAGCAT 59.510 47.619 0.00 0.00 0.00 3.79
2309 2413 0.908910 TCCGAGGGAAATAAGCAGCA 59.091 50.000 0.00 0.00 0.00 4.41
2310 2414 1.139058 TCTCCGAGGGAAATAAGCAGC 59.861 52.381 0.00 0.00 0.00 5.25
2311 2415 3.543680 TTCTCCGAGGGAAATAAGCAG 57.456 47.619 0.00 0.00 0.00 4.24
2312 2416 5.623956 TTATTCTCCGAGGGAAATAAGCA 57.376 39.130 0.00 0.00 29.93 3.91
2313 2417 7.228706 TCAAATTATTCTCCGAGGGAAATAAGC 59.771 37.037 12.13 0.00 33.20 3.09
2314 2418 8.677148 TCAAATTATTCTCCGAGGGAAATAAG 57.323 34.615 12.13 4.07 33.20 1.73
2315 2419 9.284968 GATCAAATTATTCTCCGAGGGAAATAA 57.715 33.333 0.00 10.19 33.66 1.40
2316 2420 7.602644 CGATCAAATTATTCTCCGAGGGAAATA 59.397 37.037 0.00 0.00 0.00 1.40
2318 2422 5.758296 CGATCAAATTATTCTCCGAGGGAAA 59.242 40.000 0.00 0.00 0.00 3.13
2319 2423 5.163343 ACGATCAAATTATTCTCCGAGGGAA 60.163 40.000 0.00 0.00 0.00 3.97
2321 2425 4.632153 ACGATCAAATTATTCTCCGAGGG 58.368 43.478 0.00 0.00 0.00 4.30
2322 2426 6.213677 TGTACGATCAAATTATTCTCCGAGG 58.786 40.000 0.00 0.00 0.00 4.63
2324 2428 7.170828 CCATTGTACGATCAAATTATTCTCCGA 59.829 37.037 0.00 0.00 0.00 4.55
2325 2429 7.170828 TCCATTGTACGATCAAATTATTCTCCG 59.829 37.037 0.00 0.00 0.00 4.63
2326 2430 8.378172 TCCATTGTACGATCAAATTATTCTCC 57.622 34.615 0.00 0.00 0.00 3.71
2332 2436 9.891828 GCAATAATCCATTGTACGATCAAATTA 57.108 29.630 0.00 0.00 45.05 1.40
2336 2440 6.934048 TGCAATAATCCATTGTACGATCAA 57.066 33.333 0.00 0.00 45.05 2.57
2338 2442 7.862372 ACAAATGCAATAATCCATTGTACGATC 59.138 33.333 0.00 0.00 45.05 3.69
2340 2444 7.094508 ACAAATGCAATAATCCATTGTACGA 57.905 32.000 0.00 0.00 45.05 3.43
2341 2445 8.904712 CATACAAATGCAATAATCCATTGTACG 58.095 33.333 0.00 0.00 45.05 3.67
2362 2466 5.008217 GCAATAATACCTTTGTCCGCATACA 59.992 40.000 0.00 0.00 0.00 2.29
2363 2467 5.008217 TGCAATAATACCTTTGTCCGCATAC 59.992 40.000 0.00 0.00 0.00 2.39
2364 2468 5.008217 GTGCAATAATACCTTTGTCCGCATA 59.992 40.000 0.00 0.00 0.00 3.14
2366 2470 3.127895 GTGCAATAATACCTTTGTCCGCA 59.872 43.478 0.00 0.00 0.00 5.69
2367 2471 3.127895 TGTGCAATAATACCTTTGTCCGC 59.872 43.478 0.00 0.00 0.00 5.54
2368 2472 4.438200 GGTGTGCAATAATACCTTTGTCCG 60.438 45.833 0.00 0.00 0.00 4.79
2370 2474 4.461081 TGGGTGTGCAATAATACCTTTGTC 59.539 41.667 0.00 0.00 33.71 3.18
2372 2476 5.398603 TTGGGTGTGCAATAATACCTTTG 57.601 39.130 0.00 0.00 33.71 2.77
2373 2477 6.426646 TTTTGGGTGTGCAATAATACCTTT 57.573 33.333 0.00 0.00 33.71 3.11
2374 2478 6.619329 ATTTTGGGTGTGCAATAATACCTT 57.381 33.333 0.00 0.00 33.71 3.50
2375 2479 7.617723 TCTTATTTTGGGTGTGCAATAATACCT 59.382 33.333 0.00 0.00 33.71 3.08
2376 2480 7.704899 GTCTTATTTTGGGTGTGCAATAATACC 59.295 37.037 0.00 0.00 0.00 2.73
2377 2481 8.247562 TGTCTTATTTTGGGTGTGCAATAATAC 58.752 33.333 0.00 0.00 0.00 1.89
2379 2483 7.238486 TGTCTTATTTTGGGTGTGCAATAAT 57.762 32.000 0.00 0.00 0.00 1.28
2380 2484 6.656632 TGTCTTATTTTGGGTGTGCAATAA 57.343 33.333 0.00 0.00 0.00 1.40
2384 2488 3.320541 CCTTGTCTTATTTTGGGTGTGCA 59.679 43.478 0.00 0.00 0.00 4.57
2385 2489 3.572255 TCCTTGTCTTATTTTGGGTGTGC 59.428 43.478 0.00 0.00 0.00 4.57
2386 2490 5.782893 TTCCTTGTCTTATTTTGGGTGTG 57.217 39.130 0.00 0.00 0.00 3.82
2387 2491 6.133356 TCTTTCCTTGTCTTATTTTGGGTGT 58.867 36.000 0.00 0.00 0.00 4.16
2388 2492 6.648879 TCTTTCCTTGTCTTATTTTGGGTG 57.351 37.500 0.00 0.00 0.00 4.61
2389 2493 7.669089 TTTCTTTCCTTGTCTTATTTTGGGT 57.331 32.000 0.00 0.00 0.00 4.51
2390 2494 8.992073 CATTTTCTTTCCTTGTCTTATTTTGGG 58.008 33.333 0.00 0.00 0.00 4.12
2391 2495 8.992073 CCATTTTCTTTCCTTGTCTTATTTTGG 58.008 33.333 0.00 0.00 0.00 3.28
2392 2496 9.546428 ACCATTTTCTTTCCTTGTCTTATTTTG 57.454 29.630 0.00 0.00 0.00 2.44
2396 2500 8.367911 GGAAACCATTTTCTTTCCTTGTCTTAT 58.632 33.333 2.50 0.00 41.56 1.73
2398 2502 6.156083 TGGAAACCATTTTCTTTCCTTGTCTT 59.844 34.615 9.87 0.00 44.07 3.01
2399 2503 5.660864 TGGAAACCATTTTCTTTCCTTGTCT 59.339 36.000 9.87 0.00 44.07 3.41
2400 2504 5.912892 TGGAAACCATTTTCTTTCCTTGTC 58.087 37.500 9.87 0.00 44.07 3.18
2401 2505 5.684813 GCTGGAAACCATTTTCTTTCCTTGT 60.685 40.000 9.87 0.00 44.07 3.16
2402 2506 4.751600 GCTGGAAACCATTTTCTTTCCTTG 59.248 41.667 9.87 5.13 44.07 3.61
2403 2507 4.202357 GGCTGGAAACCATTTTCTTTCCTT 60.202 41.667 9.87 0.00 44.07 3.36
2404 2508 3.324846 GGCTGGAAACCATTTTCTTTCCT 59.675 43.478 9.87 0.00 44.07 3.36
2405 2509 3.324846 AGGCTGGAAACCATTTTCTTTCC 59.675 43.478 2.73 2.73 44.02 3.13
2406 2510 4.281941 AGAGGCTGGAAACCATTTTCTTTC 59.718 41.667 0.00 0.00 40.98 2.62
2407 2511 4.039609 CAGAGGCTGGAAACCATTTTCTTT 59.960 41.667 0.00 0.00 40.98 2.52
2409 2513 3.160269 CAGAGGCTGGAAACCATTTTCT 58.840 45.455 0.00 0.00 40.98 2.52
2410 2514 2.353109 GCAGAGGCTGGAAACCATTTTC 60.353 50.000 0.00 0.00 37.76 2.29
2411 2515 1.620323 GCAGAGGCTGGAAACCATTTT 59.380 47.619 0.00 0.00 36.96 1.82
2412 2516 1.260544 GCAGAGGCTGGAAACCATTT 58.739 50.000 0.00 0.00 36.96 2.32
2413 2517 0.112995 TGCAGAGGCTGGAAACCATT 59.887 50.000 0.00 0.00 41.91 3.16
2414 2518 0.323178 CTGCAGAGGCTGGAAACCAT 60.323 55.000 8.42 0.00 41.91 3.55
2416 2520 2.338785 GCTGCAGAGGCTGGAAACC 61.339 63.158 20.43 0.00 41.91 3.27
2417 2521 0.964358 ATGCTGCAGAGGCTGGAAAC 60.964 55.000 20.43 0.00 42.15 2.78
2418 2522 0.963856 CATGCTGCAGAGGCTGGAAA 60.964 55.000 20.43 0.00 42.15 3.13
2420 2524 2.271173 CATGCTGCAGAGGCTGGA 59.729 61.111 20.43 0.00 42.95 3.86
2421 2525 2.829003 CCATGCTGCAGAGGCTGG 60.829 66.667 20.43 13.41 41.91 4.85
2422 2526 2.626255 ATCCCATGCTGCAGAGGCTG 62.626 60.000 20.43 8.03 41.91 4.85
2424 2528 1.897615 GATCCCATGCTGCAGAGGC 60.898 63.158 20.43 3.09 41.68 4.70
2425 2529 0.535328 CTGATCCCATGCTGCAGAGG 60.535 60.000 20.43 15.31 0.00 3.69
2426 2530 0.468648 TCTGATCCCATGCTGCAGAG 59.531 55.000 20.43 6.06 32.36 3.35
2428 2532 1.609072 CATTCTGATCCCATGCTGCAG 59.391 52.381 10.11 10.11 0.00 4.41
2429 2533 1.213430 TCATTCTGATCCCATGCTGCA 59.787 47.619 4.13 4.13 0.00 4.41
2430 2534 1.607628 GTCATTCTGATCCCATGCTGC 59.392 52.381 0.00 0.00 0.00 5.25
2433 2537 0.590195 GCGTCATTCTGATCCCATGC 59.410 55.000 0.00 0.00 0.00 4.06
2434 2538 1.600957 GTGCGTCATTCTGATCCCATG 59.399 52.381 0.00 0.00 0.00 3.66
2435 2539 1.210234 TGTGCGTCATTCTGATCCCAT 59.790 47.619 0.00 0.00 0.00 4.00
2437 2541 1.009829 GTGTGCGTCATTCTGATCCC 58.990 55.000 0.00 0.00 0.00 3.85
2438 2542 1.662629 CAGTGTGCGTCATTCTGATCC 59.337 52.381 0.00 0.00 0.00 3.36
2439 2543 1.061711 GCAGTGTGCGTCATTCTGATC 59.938 52.381 13.51 0.00 31.71 2.92
2440 2544 1.081892 GCAGTGTGCGTCATTCTGAT 58.918 50.000 13.51 0.00 31.71 2.90
2441 2545 0.950555 GGCAGTGTGCGTCATTCTGA 60.951 55.000 13.51 0.00 46.21 3.27
2442 2546 1.229975 TGGCAGTGTGCGTCATTCTG 61.230 55.000 0.00 0.00 46.21 3.02
2443 2547 0.321919 ATGGCAGTGTGCGTCATTCT 60.322 50.000 0.00 0.00 46.21 2.40
2445 2549 1.086696 GTATGGCAGTGTGCGTCATT 58.913 50.000 0.00 0.00 46.21 2.57
2446 2550 0.036483 TGTATGGCAGTGTGCGTCAT 60.036 50.000 0.00 0.00 46.21 3.06
2451 2555 4.188462 TGTATACTTGTATGGCAGTGTGC 58.812 43.478 4.17 0.00 44.08 4.57
2452 2556 5.874810 AGTTGTATACTTGTATGGCAGTGTG 59.125 40.000 4.17 0.00 31.29 3.82
2453 2557 6.049955 AGTTGTATACTTGTATGGCAGTGT 57.950 37.500 4.17 0.00 31.29 3.55
2454 2558 6.036083 GTGAGTTGTATACTTGTATGGCAGTG 59.964 42.308 4.17 0.00 37.17 3.66
2455 2559 6.070767 AGTGAGTTGTATACTTGTATGGCAGT 60.071 38.462 4.17 0.00 37.17 4.40
2456 2560 6.341316 AGTGAGTTGTATACTTGTATGGCAG 58.659 40.000 4.17 0.00 37.17 4.85
2457 2561 6.294361 AGTGAGTTGTATACTTGTATGGCA 57.706 37.500 4.17 0.00 37.17 4.92
2458 2562 7.490000 ACTAGTGAGTTGTATACTTGTATGGC 58.510 38.462 4.17 0.00 37.17 4.40
2459 2563 8.904834 AGACTAGTGAGTTGTATACTTGTATGG 58.095 37.037 0.00 0.00 37.17 2.74
2463 2567 9.908747 AGATAGACTAGTGAGTTGTATACTTGT 57.091 33.333 0.00 0.00 37.17 3.16
2471 2575 9.127277 GGATAAGAAGATAGACTAGTGAGTTGT 57.873 37.037 0.00 0.00 35.45 3.32
2472 2576 9.126151 TGGATAAGAAGATAGACTAGTGAGTTG 57.874 37.037 0.00 0.00 35.45 3.16
2474 2578 8.499406 ACTGGATAAGAAGATAGACTAGTGAGT 58.501 37.037 0.00 0.00 39.20 3.41
2475 2579 8.918202 ACTGGATAAGAAGATAGACTAGTGAG 57.082 38.462 0.00 0.00 0.00 3.51
2501 2605 9.830975 ACACACACACACACATATATTATACAT 57.169 29.630 0.00 0.00 0.00 2.29
2502 2606 9.092876 CACACACACACACACATATATTATACA 57.907 33.333 0.00 0.00 0.00 2.29
2503 2607 9.093970 ACACACACACACACACATATATTATAC 57.906 33.333 0.00 0.00 0.00 1.47
2505 2609 7.606073 ACACACACACACACACACATATATTAT 59.394 33.333 0.00 0.00 0.00 1.28
2506 2610 6.931840 ACACACACACACACACACATATATTA 59.068 34.615 0.00 0.00 0.00 0.98
2508 2612 5.304778 ACACACACACACACACACATATAT 58.695 37.500 0.00 0.00 0.00 0.86
2511 2615 2.979240 ACACACACACACACACACATA 58.021 42.857 0.00 0.00 0.00 2.29
2512 2616 1.819928 ACACACACACACACACACAT 58.180 45.000 0.00 0.00 0.00 3.21
2514 2618 1.663643 CCTACACACACACACACACAC 59.336 52.381 0.00 0.00 0.00 3.82
2515 2619 1.550976 TCCTACACACACACACACACA 59.449 47.619 0.00 0.00 0.00 3.72
2516 2620 2.303163 TCCTACACACACACACACAC 57.697 50.000 0.00 0.00 0.00 3.82
2517 2621 3.552132 AATCCTACACACACACACACA 57.448 42.857 0.00 0.00 0.00 3.72
2534 2638 9.178758 GTCCCATGTATTTCCAGGATATTAATC 57.821 37.037 0.00 0.00 0.00 1.75
2535 2639 8.677871 TGTCCCATGTATTTCCAGGATATTAAT 58.322 33.333 0.00 0.00 0.00 1.40
2536 2640 8.051468 TGTCCCATGTATTTCCAGGATATTAA 57.949 34.615 0.00 0.00 0.00 1.40
2538 2642 6.529084 TGTCCCATGTATTTCCAGGATATT 57.471 37.500 0.00 0.00 0.00 1.28
2539 2643 6.725101 ATGTCCCATGTATTTCCAGGATAT 57.275 37.500 0.00 0.00 0.00 1.63
2541 2645 5.142639 CAATGTCCCATGTATTTCCAGGAT 58.857 41.667 0.00 0.00 0.00 3.24
2542 2646 4.535781 CAATGTCCCATGTATTTCCAGGA 58.464 43.478 0.00 0.00 0.00 3.86
2543 2647 3.638160 CCAATGTCCCATGTATTTCCAGG 59.362 47.826 0.00 0.00 0.00 4.45
2544 2648 4.098349 CACCAATGTCCCATGTATTTCCAG 59.902 45.833 0.00 0.00 0.00 3.86
2546 2650 3.181476 GCACCAATGTCCCATGTATTTCC 60.181 47.826 0.00 0.00 0.00 3.13
2547 2651 3.446873 TGCACCAATGTCCCATGTATTTC 59.553 43.478 0.00 0.00 0.00 2.17
2549 2653 2.760092 GTGCACCAATGTCCCATGTATT 59.240 45.455 5.22 0.00 0.00 1.89
2550 2654 2.291475 TGTGCACCAATGTCCCATGTAT 60.291 45.455 15.69 0.00 0.00 2.29
2551 2655 1.074566 TGTGCACCAATGTCCCATGTA 59.925 47.619 15.69 0.00 0.00 2.29
2552 2656 0.178967 TGTGCACCAATGTCCCATGT 60.179 50.000 15.69 0.00 0.00 3.21
2553 2657 1.134936 CATGTGCACCAATGTCCCATG 60.135 52.381 15.69 4.03 0.00 3.66
2555 2659 0.178967 ACATGTGCACCAATGTCCCA 60.179 50.000 15.69 0.00 0.00 4.37
2556 2660 1.472480 GTACATGTGCACCAATGTCCC 59.528 52.381 22.06 12.78 0.00 4.46
2557 2661 1.472480 GGTACATGTGCACCAATGTCC 59.528 52.381 22.06 18.52 34.77 4.02
2558 2662 1.472480 GGGTACATGTGCACCAATGTC 59.528 52.381 22.06 14.82 36.48 3.06
2560 2664 1.543607 TGGGTACATGTGCACCAATG 58.456 50.000 15.69 14.67 36.48 2.82
2561 2665 2.298729 GTTTGGGTACATGTGCACCAAT 59.701 45.455 25.69 0.00 40.54 3.16
2562 2666 1.683917 GTTTGGGTACATGTGCACCAA 59.316 47.619 23.22 23.22 39.27 3.67
2563 2667 1.133637 AGTTTGGGTACATGTGCACCA 60.134 47.619 15.69 16.93 36.48 4.17
2564 2668 1.269448 CAGTTTGGGTACATGTGCACC 59.731 52.381 15.69 11.36 0.00 5.01
2565 2669 2.226330 TCAGTTTGGGTACATGTGCAC 58.774 47.619 16.11 13.02 0.00 4.57
2566 2670 2.647683 TCAGTTTGGGTACATGTGCA 57.352 45.000 16.11 0.00 0.00 4.57
2567 2671 4.314740 TTTTCAGTTTGGGTACATGTGC 57.685 40.909 9.11 7.07 0.00 4.57
2568 2672 5.655488 TGTTTTTCAGTTTGGGTACATGTG 58.345 37.500 9.11 0.00 0.00 3.21
2569 2673 5.923733 TGTTTTTCAGTTTGGGTACATGT 57.076 34.783 2.69 2.69 0.00 3.21
2570 2674 7.602517 TTTTGTTTTTCAGTTTGGGTACATG 57.397 32.000 0.00 0.00 0.00 3.21
2572 2676 9.535878 GATATTTTGTTTTTCAGTTTGGGTACA 57.464 29.630 0.00 0.00 0.00 2.90
2573 2677 9.535878 TGATATTTTGTTTTTCAGTTTGGGTAC 57.464 29.630 0.00 0.00 0.00 3.34
2575 2679 9.454859 TTTGATATTTTGTTTTTCAGTTTGGGT 57.545 25.926 0.00 0.00 0.00 4.51
2609 2713 4.709886 GTGACCTTATAGCCCCACATTTTT 59.290 41.667 0.00 0.00 0.00 1.94
2610 2714 4.278310 GTGACCTTATAGCCCCACATTTT 58.722 43.478 0.00 0.00 0.00 1.82
2611 2715 3.372675 GGTGACCTTATAGCCCCACATTT 60.373 47.826 0.00 0.00 0.00 2.32
2612 2716 2.174854 GGTGACCTTATAGCCCCACATT 59.825 50.000 0.00 0.00 0.00 2.71
2613 2717 1.774856 GGTGACCTTATAGCCCCACAT 59.225 52.381 0.00 0.00 0.00 3.21
2614 2718 1.209621 GGTGACCTTATAGCCCCACA 58.790 55.000 0.00 0.00 0.00 4.17
2615 2719 1.209621 TGGTGACCTTATAGCCCCAC 58.790 55.000 2.11 0.00 0.00 4.61
2616 2720 1.974028 TTGGTGACCTTATAGCCCCA 58.026 50.000 2.11 0.00 0.00 4.96
2617 2721 3.595190 ATTTGGTGACCTTATAGCCCC 57.405 47.619 2.11 0.00 0.00 5.80
2618 2722 5.535030 CCTTAATTTGGTGACCTTATAGCCC 59.465 44.000 2.11 0.00 0.00 5.19
2619 2723 6.362248 TCCTTAATTTGGTGACCTTATAGCC 58.638 40.000 2.11 0.00 0.00 3.93
2620 2724 7.875327 TTCCTTAATTTGGTGACCTTATAGC 57.125 36.000 2.11 0.00 0.00 2.97
2622 2726 9.196139 CCAATTCCTTAATTTGGTGACCTTATA 57.804 33.333 2.11 0.00 32.87 0.98
2623 2727 7.125659 CCCAATTCCTTAATTTGGTGACCTTAT 59.874 37.037 2.11 0.00 34.58 1.73
2624 2728 6.439058 CCCAATTCCTTAATTTGGTGACCTTA 59.561 38.462 2.11 0.00 34.58 2.69
2625 2729 5.248248 CCCAATTCCTTAATTTGGTGACCTT 59.752 40.000 2.11 0.00 34.58 3.50
2626 2730 4.777366 CCCAATTCCTTAATTTGGTGACCT 59.223 41.667 2.11 0.00 34.58 3.85
2627 2731 4.081142 CCCCAATTCCTTAATTTGGTGACC 60.081 45.833 0.00 0.00 36.56 4.02
2628 2732 4.530553 ACCCCAATTCCTTAATTTGGTGAC 59.469 41.667 0.00 0.00 36.56 3.67
2629 2733 4.530161 CACCCCAATTCCTTAATTTGGTGA 59.470 41.667 16.85 0.00 46.55 4.02
2630 2734 4.323409 CCACCCCAATTCCTTAATTTGGTG 60.323 45.833 15.75 15.75 45.09 4.17
2631 2735 3.843619 CCACCCCAATTCCTTAATTTGGT 59.156 43.478 0.00 0.00 36.56 3.67
2632 2736 3.199727 CCCACCCCAATTCCTTAATTTGG 59.800 47.826 0.00 0.00 37.54 3.28
2633 2737 4.100373 TCCCACCCCAATTCCTTAATTTG 58.900 43.478 0.00 0.00 32.87 2.32
2634 2738 4.427956 TCCCACCCCAATTCCTTAATTT 57.572 40.909 0.00 0.00 32.87 1.82
2635 2739 4.361783 CTTCCCACCCCAATTCCTTAATT 58.638 43.478 0.00 0.00 35.65 1.40
2636 2740 3.310583 CCTTCCCACCCCAATTCCTTAAT 60.311 47.826 0.00 0.00 0.00 1.40
2637 2741 2.043801 CCTTCCCACCCCAATTCCTTAA 59.956 50.000 0.00 0.00 0.00 1.85
2638 2742 1.643811 CCTTCCCACCCCAATTCCTTA 59.356 52.381 0.00 0.00 0.00 2.69
2639 2743 0.413434 CCTTCCCACCCCAATTCCTT 59.587 55.000 0.00 0.00 0.00 3.36
2640 2744 1.518431 CCCTTCCCACCCCAATTCCT 61.518 60.000 0.00 0.00 0.00 3.36
2641 2745 1.001631 CCCTTCCCACCCCAATTCC 59.998 63.158 0.00 0.00 0.00 3.01
2642 2746 0.033109 CTCCCTTCCCACCCCAATTC 60.033 60.000 0.00 0.00 0.00 2.17
2648 2752 1.369403 AAACTACTCCCTTCCCACCC 58.631 55.000 0.00 0.00 0.00 4.61
2770 2884 2.349590 TCATCTGACGCAACATGGAAG 58.650 47.619 0.00 0.00 0.00 3.46
2772 2886 2.470983 TTCATCTGACGCAACATGGA 57.529 45.000 0.00 0.00 0.00 3.41
2794 2908 3.447229 TCAGTTGACTATCGCCATCAGAA 59.553 43.478 0.00 0.00 0.00 3.02
2795 2909 3.023832 TCAGTTGACTATCGCCATCAGA 58.976 45.455 0.00 0.00 0.00 3.27
2796 2910 3.119291 GTCAGTTGACTATCGCCATCAG 58.881 50.000 5.04 0.00 41.65 2.90
2797 2911 3.165058 GTCAGTTGACTATCGCCATCA 57.835 47.619 5.04 0.00 41.65 3.07
2808 2922 0.398318 AGGGGCTTCAGTCAGTTGAC 59.602 55.000 4.09 4.09 45.08 3.18
2809 2923 0.397941 CAGGGGCTTCAGTCAGTTGA 59.602 55.000 0.00 0.00 0.00 3.18
2810 2924 1.239968 GCAGGGGCTTCAGTCAGTTG 61.240 60.000 0.00 0.00 36.96 3.16
2910 3024 0.744874 CATTCATCCAAGCTGCAGGG 59.255 55.000 17.12 8.60 0.00 4.45
3012 3126 3.019003 GCTCTTCTGGTAGCCGGCA 62.019 63.158 31.54 12.31 32.40 5.69
3196 3310 3.061295 CAGTGATTTCGATGGAAGTGACG 59.939 47.826 0.00 0.00 32.64 4.35
3199 3313 5.171476 ACTACAGTGATTTCGATGGAAGTG 58.829 41.667 0.00 0.00 32.80 3.16
3207 3321 7.248437 CACTACACATACTACAGTGATTTCGA 58.752 38.462 0.00 0.00 39.13 3.71
3208 3322 6.020599 GCACTACACATACTACAGTGATTTCG 60.021 42.308 0.00 0.00 39.13 3.46
3379 3499 4.082895 AGCTAGCGTAATATACCAACGGAG 60.083 45.833 9.55 0.00 37.12 4.63
3409 3529 3.670991 GCGTATGAATAGCTGCAGTCTAC 59.329 47.826 16.64 7.11 0.00 2.59
3469 3590 0.948678 TGCTCTTAAACCCGCAACAC 59.051 50.000 0.00 0.00 0.00 3.32
3533 3654 8.827677 CGGAACAAATATAAGGAGTTAAAGGAG 58.172 37.037 0.00 0.00 0.00 3.69
3560 3681 4.680171 GCTAGGAAGCGCTTTTCTTTAA 57.320 40.909 25.84 9.24 39.39 1.52
3620 3741 2.552367 GAGGAAGAAGGAAGAAGGGGA 58.448 52.381 0.00 0.00 0.00 4.81
3632 3753 1.295423 CGCGGGAAAGGAGGAAGAA 59.705 57.895 0.00 0.00 0.00 2.52
3715 3836 7.967854 TGAGATTGTATCAAATTACTTTTGCGG 59.032 33.333 0.00 0.00 43.68 5.69
3745 3866 3.780693 GCATACTTGCGTCGCTCA 58.219 55.556 19.50 4.08 39.49 4.26
3817 3938 3.694566 AGAACCCATTCAGGCGAATAAAC 59.305 43.478 4.67 0.00 39.96 2.01
3825 3946 0.322546 ACGGAAGAACCCATTCAGGC 60.323 55.000 0.00 0.00 37.29 4.85
3826 3947 1.679032 GGACGGAAGAACCCATTCAGG 60.679 57.143 0.00 0.00 37.29 3.86
3833 3954 0.618981 AAGGATGGACGGAAGAACCC 59.381 55.000 0.00 0.00 34.64 4.11
3850 3971 2.016393 TATCGCGCCACCAGGAGAAG 62.016 60.000 0.00 0.00 36.74 2.85
3858 3979 2.890474 CCACACTATCGCGCCACC 60.890 66.667 0.00 0.00 0.00 4.61
3864 3985 0.804933 GTTCCGGACCACACTATCGC 60.805 60.000 1.83 0.00 0.00 4.58
3936 4057 2.756042 CGCCCCTTCCATCATCCCA 61.756 63.158 0.00 0.00 0.00 4.37
4001 4125 4.957759 TTCTGACGAGATTGTGACGATA 57.042 40.909 0.00 0.00 0.00 2.92
4004 4128 4.434725 CCAAATTCTGACGAGATTGTGACG 60.435 45.833 0.00 0.00 0.00 4.35
4008 4132 3.753272 CCACCAAATTCTGACGAGATTGT 59.247 43.478 0.00 0.00 0.00 2.71
4009 4133 3.753272 ACCACCAAATTCTGACGAGATTG 59.247 43.478 0.00 0.00 0.00 2.67
4014 4138 3.056107 CCTCTACCACCAAATTCTGACGA 60.056 47.826 0.00 0.00 0.00 4.20
4020 4144 3.259902 GTCGACCTCTACCACCAAATTC 58.740 50.000 3.51 0.00 0.00 2.17
4032 4156 4.057428 GCAGCACCGTCGACCTCT 62.057 66.667 10.58 0.00 0.00 3.69
4058 4182 0.813184 GACCATCACATGCCACCAAG 59.187 55.000 0.00 0.00 0.00 3.61
4090 4214 4.335647 CACTCCAGTGCCGGCCTT 62.336 66.667 26.77 9.34 39.39 4.35
4117 4241 0.618458 TCTATTCTTGCCCACCGCTT 59.382 50.000 0.00 0.00 38.78 4.68
4145 4269 5.872963 TCAGCAGCCATCATGAGTATAAAT 58.127 37.500 0.09 0.00 0.00 1.40
4157 4281 2.698855 TTTACTCCTCAGCAGCCATC 57.301 50.000 0.00 0.00 0.00 3.51
4159 4283 5.887214 TTATATTTACTCCTCAGCAGCCA 57.113 39.130 0.00 0.00 0.00 4.75
4186 4310 0.872881 TAAAAGTATCGGCCGCTCGC 60.873 55.000 23.51 10.54 0.00 5.03
4208 4332 0.117340 ATCCCTATCCCCTTCGGAGG 59.883 60.000 1.30 1.30 46.60 4.30
4209 4333 1.562783 GATCCCTATCCCCTTCGGAG 58.437 60.000 0.00 0.00 46.60 4.63
4224 4348 5.055144 GGTTAAACCCAATCTAGTCGATCC 58.945 45.833 0.00 0.00 30.04 3.36
4263 4387 8.684520 TCCTTTAGAAGTCGTTAGAGGAATAAG 58.315 37.037 0.00 0.00 0.00 1.73
4277 4401 9.005777 ACATCTATAGTCGATCCTTTAGAAGTC 57.994 37.037 0.00 0.00 31.61 3.01
4279 4403 9.226606 AGACATCTATAGTCGATCCTTTAGAAG 57.773 37.037 0.00 6.03 40.84 2.85
4285 4409 7.147983 GGCATTAGACATCTATAGTCGATCCTT 60.148 40.741 0.00 0.00 40.84 3.36
4297 4421 7.015292 CCTTACTAGTTGGGCATTAGACATCTA 59.985 40.741 0.00 0.00 0.00 1.98
4320 4444 7.227314 CACTGATTGCATGTGTATATGTACCTT 59.773 37.037 0.00 0.00 0.00 3.50
4321 4445 6.707608 CACTGATTGCATGTGTATATGTACCT 59.292 38.462 0.00 0.00 0.00 3.08
4322 4446 6.073058 CCACTGATTGCATGTGTATATGTACC 60.073 42.308 0.00 0.00 0.00 3.34
4323 4447 6.566564 GCCACTGATTGCATGTGTATATGTAC 60.567 42.308 0.00 0.00 0.00 2.90
4324 4448 5.469760 GCCACTGATTGCATGTGTATATGTA 59.530 40.000 0.00 0.00 0.00 2.29
4325 4449 4.276678 GCCACTGATTGCATGTGTATATGT 59.723 41.667 0.00 0.00 0.00 2.29
4326 4450 4.612033 CGCCACTGATTGCATGTGTATATG 60.612 45.833 0.00 0.00 0.00 1.78
4327 4451 3.499537 CGCCACTGATTGCATGTGTATAT 59.500 43.478 0.00 0.00 0.00 0.86
4328 4452 2.871633 CGCCACTGATTGCATGTGTATA 59.128 45.455 0.00 0.00 0.00 1.47
4338 4462 2.046023 TGCCTCCGCCACTGATTG 60.046 61.111 0.00 0.00 0.00 2.67
4343 4467 3.011517 AATCCTGCCTCCGCCACT 61.012 61.111 0.00 0.00 0.00 4.00
4349 4473 3.139211 AGATTTTAGGGAATCCTGCCTCC 59.861 47.826 0.00 0.00 39.76 4.30
4350 4474 4.141390 TGAGATTTTAGGGAATCCTGCCTC 60.141 45.833 0.00 0.00 39.76 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.