Multiple sequence alignment - TraesCS6B01G247900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G247900 chr6B 100.000 5501 0 0 1 5501 444681587 444687087 0.000000e+00 10159.0
1 TraesCS6B01G247900 chr6B 100.000 1274 0 0 5663 6936 444687249 444688522 0.000000e+00 2353.0
2 TraesCS6B01G247900 chr6B 93.989 183 11 0 7 189 317358351 317358169 1.910000e-70 278.0
3 TraesCS6B01G247900 chr6B 89.610 77 8 0 1837 1913 642972579 642972655 1.590000e-16 99.0
4 TraesCS6B01G247900 chr6B 91.667 60 5 0 1840 1899 77881374 77881315 4.460000e-12 84.2
5 TraesCS6B01G247900 chr6B 88.136 59 7 0 2523 2581 551930242 551930300 3.470000e-08 71.3
6 TraesCS6B01G247900 chr6D 95.934 3173 106 10 1688 4841 283796239 283799407 0.000000e+00 5123.0
7 TraesCS6B01G247900 chr6D 91.003 1167 69 14 5663 6801 283800266 283801424 0.000000e+00 1541.0
8 TraesCS6B01G247900 chr6D 89.616 886 58 6 821 1676 283794891 283795772 0.000000e+00 1096.0
9 TraesCS6B01G247900 chr6D 94.362 674 30 5 4830 5499 283799543 283800212 0.000000e+00 1027.0
10 TraesCS6B01G247900 chr6D 91.463 82 5 1 486 565 283794375 283794456 2.050000e-20 111.0
11 TraesCS6B01G247900 chr6D 87.013 77 10 0 1837 1913 427126968 427127044 3.450000e-13 87.9
12 TraesCS6B01G247900 chr6D 97.436 39 1 0 1688 1726 283795884 283795922 4.490000e-07 67.6
13 TraesCS6B01G247900 chr6A 94.189 2977 116 11 1837 4774 404350734 404353692 0.000000e+00 4486.0
14 TraesCS6B01G247900 chr6A 88.825 1038 53 29 754 1758 404348951 404349958 0.000000e+00 1216.0
15 TraesCS6B01G247900 chr6A 89.046 566 29 11 6343 6881 404355547 404356106 0.000000e+00 671.0
16 TraesCS6B01G247900 chr6A 87.901 405 38 7 4913 5315 404354161 404354556 3.790000e-127 466.0
17 TraesCS6B01G247900 chr6A 87.279 283 27 6 6035 6316 404355272 404355546 1.450000e-81 315.0
18 TraesCS6B01G247900 chr6A 94.536 183 8 2 5315 5497 404354819 404354999 1.470000e-71 281.0
19 TraesCS6B01G247900 chr6A 89.333 225 20 2 5722 5942 404355017 404355241 5.300000e-71 279.0
20 TraesCS6B01G247900 chr6A 87.586 145 7 5 639 772 404348783 404348927 2.590000e-34 158.0
21 TraesCS6B01G247900 chr6A 86.364 132 13 1 484 610 404348651 404348782 9.380000e-29 139.0
22 TraesCS6B01G247900 chr2B 93.158 190 13 0 1 190 373947424 373947235 5.300000e-71 279.0
23 TraesCS6B01G247900 chr2B 91.892 74 6 0 1840 1913 701505433 701505360 3.420000e-18 104.0
24 TraesCS6B01G247900 chr5B 92.268 194 15 0 1 194 266792860 266793053 6.850000e-70 276.0
25 TraesCS6B01G247900 chr5B 92.593 189 14 0 1 189 673417242 673417054 8.860000e-69 272.0
26 TraesCS6B01G247900 chr7B 93.443 183 12 0 7 189 13283224 13283042 8.860000e-69 272.0
27 TraesCS6B01G247900 chr3D 92.593 189 14 0 1 189 2873136 2873324 8.860000e-69 272.0
28 TraesCS6B01G247900 chr3D 82.558 258 25 10 197 435 441581388 441581132 7.050000e-50 209.0
29 TraesCS6B01G247900 chr3D 78.731 268 25 17 199 435 130962244 130961978 4.330000e-32 150.0
30 TraesCS6B01G247900 chr5D 92.063 189 15 0 1 189 459154411 459154599 4.120000e-67 267.0
31 TraesCS6B01G247900 chr5D 81.481 270 24 13 197 440 9065400 9065131 1.530000e-46 198.0
32 TraesCS6B01G247900 chr2D 92.896 183 13 0 7 189 548248799 548248617 4.120000e-67 267.0
33 TraesCS6B01G247900 chr2D 91.892 74 6 0 1840 1913 582545227 582545154 3.420000e-18 104.0
34 TraesCS6B01G247900 chr1D 92.896 183 13 0 7 189 466068498 466068316 4.120000e-67 267.0
35 TraesCS6B01G247900 chr7D 79.853 273 26 10 184 427 628099823 628100095 9.250000e-39 172.0
36 TraesCS6B01G247900 chr7D 79.724 217 22 11 233 427 628022477 628022693 3.370000e-28 137.0
37 TraesCS6B01G247900 chr7D 79.630 216 23 10 233 427 627690621 627690836 1.210000e-27 135.0
38 TraesCS6B01G247900 chr7D 79.167 216 24 10 233 427 627750300 627750515 5.650000e-26 130.0
39 TraesCS6B01G247900 chr7D 79.167 216 24 10 233 427 627805514 627805729 5.650000e-26 130.0
40 TraesCS6B01G247900 chr7D 78.802 217 22 13 233 427 627866716 627866930 2.630000e-24 124.0
41 TraesCS6B01G247900 chr3A 79.167 120 20 3 326 440 633048505 633048624 2.070000e-10 78.7
42 TraesCS6B01G247900 chr4B 81.522 92 15 2 2523 2613 86075476 86075566 2.680000e-09 75.0
43 TraesCS6B01G247900 chr4A 81.522 92 15 2 2523 2613 539159746 539159656 2.680000e-09 75.0
44 TraesCS6B01G247900 chr4D 88.136 59 7 0 2523 2581 57678007 57678065 3.470000e-08 71.3
45 TraesCS6B01G247900 chr1A 85.075 67 10 0 2524 2590 53497954 53497888 1.250000e-07 69.4
46 TraesCS6B01G247900 chr3B 77.953 127 12 8 190 301 648733972 648734097 1.610000e-06 65.8
47 TraesCS6B01G247900 chr5A 84.483 58 6 3 383 438 503662473 503662529 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G247900 chr6B 444681587 444688522 6935 False 6256.000000 10159 100.000000 1 6936 2 chr6B.!!$F3 6935
1 TraesCS6B01G247900 chr6D 283794375 283801424 7049 False 1494.266667 5123 93.302333 486 6801 6 chr6D.!!$F2 6315
2 TraesCS6B01G247900 chr6A 404348651 404356106 7455 False 890.111111 4486 89.451000 484 6881 9 chr6A.!!$F1 6397

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
457 458 0.106419 AAAACAGCCCCGGACAGAAA 60.106 50.000 0.73 0.0 0.00 2.52 F
478 479 0.244994 AAAAACACAGCCACGTTGCA 59.755 45.000 14.67 0.0 0.00 4.08 F
1379 1651 0.322997 TAAACAGGATTGCCGGGGTG 60.323 55.000 2.18 0.0 39.96 4.61 F
2866 4213 0.393808 GCCGGGTGAAGCCTTTGATA 60.394 55.000 2.18 0.0 37.43 2.15 F
2935 4282 0.521735 CGGCACAAAGGAACCTAAGC 59.478 55.000 0.00 0.0 0.00 3.09 F
3256 4603 1.208535 CAGTGCCGGGGTATGTTTCTA 59.791 52.381 2.18 0.0 0.00 2.10 F
4133 5494 1.815003 AGCTTTAAGCATCACAGTGCC 59.185 47.619 19.63 0.0 45.56 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1379 1651 0.246635 TGTAGCCTCTCCTTGCGAAC 59.753 55.000 0.00 0.00 0.00 3.95 R
2258 3596 1.133598 CTGTATGTGCACAATGGCAGG 59.866 52.381 25.72 6.84 45.96 4.85 R
3325 4672 1.066358 AGCCTAGACGCCACCTTTTAC 60.066 52.381 0.00 0.00 0.00 2.01 R
4656 6018 0.825840 GTATCTCCCTCCGAGCAGCT 60.826 60.000 0.00 0.00 38.62 4.24 R
4879 6569 4.668576 ATAGTTGCAGTCATGTCAAACG 57.331 40.909 0.00 0.00 0.00 3.60 R
5051 6889 4.402155 ACAATGAAGAGGCAAAAACAGTCA 59.598 37.500 0.00 0.00 0.00 3.41 R
5975 8085 0.250640 CTGCTCAGCTCAACCAACCT 60.251 55.000 0.00 0.00 0.00 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.963083 AGAGGTGCTACTACTAATTACCAG 57.037 41.667 0.00 0.00 0.00 4.00
24 25 6.433441 AGAGGTGCTACTACTAATTACCAGT 58.567 40.000 0.00 1.08 0.00 4.00
25 26 7.580910 AGAGGTGCTACTACTAATTACCAGTA 58.419 38.462 0.00 2.84 0.00 2.74
30 31 6.557291 CTACTACTAATTACCAGTAGCGCT 57.443 41.667 17.26 17.26 46.25 5.92
31 32 5.435820 ACTACTAATTACCAGTAGCGCTC 57.564 43.478 16.34 5.88 46.25 5.03
32 33 3.729862 ACTAATTACCAGTAGCGCTCC 57.270 47.619 16.34 0.52 0.00 4.70
33 34 3.297736 ACTAATTACCAGTAGCGCTCCT 58.702 45.455 16.34 4.18 0.00 3.69
34 35 4.467769 ACTAATTACCAGTAGCGCTCCTA 58.532 43.478 16.34 0.00 0.00 2.94
35 36 4.519730 ACTAATTACCAGTAGCGCTCCTAG 59.480 45.833 16.34 2.58 0.00 3.02
36 37 2.431954 TTACCAGTAGCGCTCCTAGT 57.568 50.000 16.34 10.33 0.00 2.57
37 38 1.676746 TACCAGTAGCGCTCCTAGTG 58.323 55.000 16.34 10.19 43.95 2.74
39 40 2.795165 CAGTAGCGCTCCTAGTGGA 58.205 57.895 16.34 0.00 41.70 4.02
40 41 1.103803 CAGTAGCGCTCCTAGTGGAA 58.896 55.000 16.34 0.00 41.70 3.53
41 42 1.476891 CAGTAGCGCTCCTAGTGGAAA 59.523 52.381 16.34 0.00 41.70 3.13
42 43 1.751924 AGTAGCGCTCCTAGTGGAAAG 59.248 52.381 16.34 0.00 42.66 2.62
43 44 0.460311 TAGCGCTCCTAGTGGAAAGC 59.540 55.000 16.34 0.00 42.66 3.51
44 45 4.094684 CGCTCCTAGTGGAAAGCG 57.905 61.111 8.39 8.39 45.77 4.68
45 46 2.167861 CGCTCCTAGTGGAAAGCGC 61.168 63.158 0.00 0.00 45.42 5.92
46 47 1.219393 GCTCCTAGTGGAAAGCGCT 59.781 57.895 2.64 2.64 42.66 5.92
47 48 1.086634 GCTCCTAGTGGAAAGCGCTG 61.087 60.000 12.58 0.00 42.66 5.18
48 49 1.079127 TCCTAGTGGAAAGCGCTGC 60.079 57.895 12.58 6.29 39.87 5.25
49 50 1.078848 CCTAGTGGAAAGCGCTGCT 60.079 57.895 12.58 0.00 36.34 4.24
50 51 0.175760 CCTAGTGGAAAGCGCTGCTA 59.824 55.000 12.58 8.11 34.32 3.49
51 52 1.281899 CTAGTGGAAAGCGCTGCTAC 58.718 55.000 12.58 14.86 38.25 3.58
52 53 0.895530 TAGTGGAAAGCGCTGCTACT 59.104 50.000 25.22 25.22 38.25 2.57
53 54 0.895530 AGTGGAAAGCGCTGCTACTA 59.104 50.000 22.27 6.57 38.25 1.82
54 55 1.275291 AGTGGAAAGCGCTGCTACTAA 59.725 47.619 22.27 0.00 38.25 2.24
55 56 1.661112 GTGGAAAGCGCTGCTACTAAG 59.339 52.381 12.58 0.00 38.25 2.18
56 57 1.275291 TGGAAAGCGCTGCTACTAAGT 59.725 47.619 12.58 0.00 38.25 2.24
57 58 1.927838 GGAAAGCGCTGCTACTAAGTC 59.072 52.381 12.58 0.00 38.25 3.01
58 59 1.584308 GAAAGCGCTGCTACTAAGTCG 59.416 52.381 12.58 0.00 38.25 4.18
59 60 0.809385 AAGCGCTGCTACTAAGTCGA 59.191 50.000 12.58 0.00 38.25 4.20
60 61 1.025812 AGCGCTGCTACTAAGTCGAT 58.974 50.000 10.39 0.00 36.99 3.59
61 62 2.219458 AGCGCTGCTACTAAGTCGATA 58.781 47.619 10.39 0.00 36.99 2.92
62 63 2.814919 AGCGCTGCTACTAAGTCGATAT 59.185 45.455 10.39 0.00 36.99 1.63
63 64 4.001652 AGCGCTGCTACTAAGTCGATATA 58.998 43.478 10.39 0.00 36.99 0.86
64 65 4.093703 AGCGCTGCTACTAAGTCGATATAG 59.906 45.833 10.39 6.04 36.99 1.31
65 66 4.336101 CGCTGCTACTAAGTCGATATAGC 58.664 47.826 0.00 7.92 38.97 2.97
66 67 4.142881 CGCTGCTACTAAGTCGATATAGCA 60.143 45.833 14.33 14.33 44.46 3.49
70 71 7.598189 TGCTACTAAGTCGATATAGCAGTAG 57.402 40.000 12.25 7.67 42.43 2.57
71 72 7.160049 TGCTACTAAGTCGATATAGCAGTAGT 58.840 38.462 11.74 5.30 42.43 2.73
72 73 7.117956 TGCTACTAAGTCGATATAGCAGTAGTG 59.882 40.741 11.74 0.00 42.43 2.74
73 74 7.118101 GCTACTAAGTCGATATAGCAGTAGTGT 59.882 40.741 11.74 0.00 38.49 3.55
74 75 7.192148 ACTAAGTCGATATAGCAGTAGTGTG 57.808 40.000 0.00 0.00 0.00 3.82
75 76 5.440234 AAGTCGATATAGCAGTAGTGTGG 57.560 43.478 0.00 0.00 0.00 4.17
76 77 4.462133 AGTCGATATAGCAGTAGTGTGGT 58.538 43.478 0.00 0.00 0.00 4.16
77 78 4.515944 AGTCGATATAGCAGTAGTGTGGTC 59.484 45.833 0.00 0.00 0.00 4.02
78 79 3.819337 TCGATATAGCAGTAGTGTGGTCC 59.181 47.826 0.00 0.00 0.00 4.46
79 80 3.365064 CGATATAGCAGTAGTGTGGTCCG 60.365 52.174 0.00 0.00 0.00 4.79
80 81 2.139323 ATAGCAGTAGTGTGGTCCGA 57.861 50.000 0.00 0.00 0.00 4.55
81 82 1.171308 TAGCAGTAGTGTGGTCCGAC 58.829 55.000 0.00 0.00 0.00 4.79
82 83 0.826256 AGCAGTAGTGTGGTCCGACA 60.826 55.000 0.00 0.00 0.00 4.35
83 84 0.666577 GCAGTAGTGTGGTCCGACAC 60.667 60.000 13.63 13.63 45.63 3.67
88 89 3.533105 TGTGGTCCGACACACGCT 61.533 61.111 12.59 0.00 45.70 5.07
89 90 2.194889 TGTGGTCCGACACACGCTA 61.195 57.895 12.59 0.00 45.70 4.26
90 91 1.731969 GTGGTCCGACACACGCTAC 60.732 63.158 0.00 0.00 40.99 3.58
91 92 1.900016 TGGTCCGACACACGCTACT 60.900 57.895 0.00 0.00 41.07 2.57
92 93 1.443872 GGTCCGACACACGCTACTG 60.444 63.158 0.00 0.00 41.07 2.74
93 94 2.087009 GTCCGACACACGCTACTGC 61.087 63.158 0.00 0.00 41.07 4.40
94 95 2.258591 CCGACACACGCTACTGCT 59.741 61.111 0.00 0.00 41.07 4.24
95 96 0.956902 TCCGACACACGCTACTGCTA 60.957 55.000 0.00 0.00 41.07 3.49
96 97 0.109458 CCGACACACGCTACTGCTAA 60.109 55.000 0.00 0.00 41.07 3.09
97 98 0.982673 CGACACACGCTACTGCTAAC 59.017 55.000 0.00 0.00 36.97 2.34
98 99 1.401148 CGACACACGCTACTGCTAACT 60.401 52.381 0.00 0.00 36.97 2.24
99 100 2.673833 GACACACGCTACTGCTAACTT 58.326 47.619 0.00 0.00 36.97 2.66
100 101 3.057734 GACACACGCTACTGCTAACTTT 58.942 45.455 0.00 0.00 36.97 2.66
101 102 3.463944 ACACACGCTACTGCTAACTTTT 58.536 40.909 0.00 0.00 36.97 2.27
102 103 4.624015 ACACACGCTACTGCTAACTTTTA 58.376 39.130 0.00 0.00 36.97 1.52
103 104 4.684703 ACACACGCTACTGCTAACTTTTAG 59.315 41.667 0.00 0.00 36.97 1.85
104 105 4.684703 CACACGCTACTGCTAACTTTTAGT 59.315 41.667 0.00 0.00 36.97 2.24
105 106 5.176958 CACACGCTACTGCTAACTTTTAGTT 59.823 40.000 0.00 0.00 41.97 2.24
106 107 5.176958 ACACGCTACTGCTAACTTTTAGTTG 59.823 40.000 2.45 0.00 39.11 3.16
107 108 5.176958 CACGCTACTGCTAACTTTTAGTTGT 59.823 40.000 2.45 0.00 39.11 3.32
108 109 6.364165 CACGCTACTGCTAACTTTTAGTTGTA 59.636 38.462 2.45 0.00 39.11 2.41
109 110 6.585322 ACGCTACTGCTAACTTTTAGTTGTAG 59.415 38.462 15.37 15.37 39.11 2.74
110 111 6.453922 CGCTACTGCTAACTTTTAGTTGTAGC 60.454 42.308 23.82 23.82 44.64 3.58
111 112 5.840940 ACTGCTAACTTTTAGTTGTAGCG 57.159 39.130 2.45 4.35 40.75 4.26
112 113 4.151867 ACTGCTAACTTTTAGTTGTAGCGC 59.848 41.667 0.00 0.00 40.75 5.92
113 114 3.434299 TGCTAACTTTTAGTTGTAGCGCC 59.566 43.478 2.29 0.00 40.75 6.53
114 115 3.683340 GCTAACTTTTAGTTGTAGCGCCT 59.317 43.478 2.29 0.00 39.11 5.52
115 116 4.153655 GCTAACTTTTAGTTGTAGCGCCTT 59.846 41.667 2.29 0.00 39.11 4.35
116 117 5.349543 GCTAACTTTTAGTTGTAGCGCCTTA 59.650 40.000 2.29 0.00 39.11 2.69
117 118 5.602458 AACTTTTAGTTGTAGCGCCTTAC 57.398 39.130 2.29 0.94 37.00 2.34
118 119 4.891260 ACTTTTAGTTGTAGCGCCTTACT 58.109 39.130 2.29 5.49 0.00 2.24
119 120 6.029346 ACTTTTAGTTGTAGCGCCTTACTA 57.971 37.500 2.29 4.41 0.00 1.82
120 121 6.098017 ACTTTTAGTTGTAGCGCCTTACTAG 58.902 40.000 2.29 0.37 0.00 2.57
121 122 5.649782 TTTAGTTGTAGCGCCTTACTAGT 57.350 39.130 2.29 0.00 0.00 2.57
122 123 6.757897 TTTAGTTGTAGCGCCTTACTAGTA 57.242 37.500 2.29 0.00 0.00 1.82
123 124 4.897025 AGTTGTAGCGCCTTACTAGTAG 57.103 45.455 2.29 0.00 0.00 2.57
124 125 3.066481 AGTTGTAGCGCCTTACTAGTAGC 59.934 47.826 2.29 3.49 0.00 3.58
128 129 3.165559 CGCCTTACTAGTAGCGCTG 57.834 57.895 22.90 5.37 42.31 5.18
129 130 0.381089 CGCCTTACTAGTAGCGCTGT 59.619 55.000 22.90 12.13 42.31 4.40
130 131 1.202268 CGCCTTACTAGTAGCGCTGTT 60.202 52.381 22.90 10.65 42.31 3.16
131 132 2.461903 GCCTTACTAGTAGCGCTGTTC 58.538 52.381 22.90 10.58 0.00 3.18
132 133 2.798853 GCCTTACTAGTAGCGCTGTTCC 60.799 54.545 22.90 5.06 0.00 3.62
133 134 2.223758 CCTTACTAGTAGCGCTGTTCCC 60.224 54.545 22.90 2.30 0.00 3.97
134 135 1.396653 TACTAGTAGCGCTGTTCCCC 58.603 55.000 22.90 0.35 0.00 4.81
135 136 1.065928 CTAGTAGCGCTGTTCCCCG 59.934 63.158 22.90 0.00 0.00 5.73
142 143 4.452733 GCTGTTCCCCGCGCTACT 62.453 66.667 5.56 0.00 0.00 2.57
143 144 2.509336 CTGTTCCCCGCGCTACTG 60.509 66.667 5.56 0.00 0.00 2.74
144 145 2.992689 TGTTCCCCGCGCTACTGA 60.993 61.111 5.56 0.00 0.00 3.41
145 146 2.298158 CTGTTCCCCGCGCTACTGAT 62.298 60.000 5.56 0.00 0.00 2.90
146 147 1.038681 TGTTCCCCGCGCTACTGATA 61.039 55.000 5.56 0.00 0.00 2.15
147 148 0.317479 GTTCCCCGCGCTACTGATAT 59.683 55.000 5.56 0.00 0.00 1.63
148 149 0.317160 TTCCCCGCGCTACTGATATG 59.683 55.000 5.56 0.00 0.00 1.78
149 150 1.738099 CCCCGCGCTACTGATATGC 60.738 63.158 5.56 0.00 0.00 3.14
150 151 1.290324 CCCGCGCTACTGATATGCT 59.710 57.895 5.56 0.00 0.00 3.79
151 152 0.319900 CCCGCGCTACTGATATGCTT 60.320 55.000 5.56 0.00 0.00 3.91
152 153 1.502231 CCGCGCTACTGATATGCTTT 58.498 50.000 5.56 0.00 0.00 3.51
153 154 2.609491 CCCGCGCTACTGATATGCTTTA 60.609 50.000 5.56 0.00 0.00 1.85
154 155 3.057019 CCGCGCTACTGATATGCTTTAA 58.943 45.455 5.56 0.00 0.00 1.52
155 156 3.493129 CCGCGCTACTGATATGCTTTAAA 59.507 43.478 5.56 0.00 0.00 1.52
156 157 4.446234 CGCGCTACTGATATGCTTTAAAC 58.554 43.478 5.56 0.00 0.00 2.01
157 158 4.026062 CGCGCTACTGATATGCTTTAAACA 60.026 41.667 5.56 0.00 0.00 2.83
158 159 5.198274 GCGCTACTGATATGCTTTAAACAC 58.802 41.667 0.00 0.00 0.00 3.32
159 160 5.220586 GCGCTACTGATATGCTTTAAACACA 60.221 40.000 0.00 0.00 0.00 3.72
160 161 6.185399 CGCTACTGATATGCTTTAAACACAC 58.815 40.000 0.00 0.00 0.00 3.82
161 162 6.185399 GCTACTGATATGCTTTAAACACACG 58.815 40.000 0.00 0.00 0.00 4.49
162 163 4.969816 ACTGATATGCTTTAAACACACGC 58.030 39.130 0.00 0.00 0.00 5.34
163 164 4.695455 ACTGATATGCTTTAAACACACGCT 59.305 37.500 0.00 0.00 0.00 5.07
164 165 5.872617 ACTGATATGCTTTAAACACACGCTA 59.127 36.000 0.00 0.00 0.00 4.26
165 166 6.102006 TGATATGCTTTAAACACACGCTAC 57.898 37.500 0.00 0.00 0.00 3.58
166 167 5.872617 TGATATGCTTTAAACACACGCTACT 59.127 36.000 0.00 0.00 0.00 2.57
167 168 3.870723 TGCTTTAAACACACGCTACTG 57.129 42.857 0.00 0.00 0.00 2.74
168 169 2.032377 TGCTTTAAACACACGCTACTGC 60.032 45.455 0.00 0.00 0.00 4.40
169 170 2.223377 GCTTTAAACACACGCTACTGCT 59.777 45.455 0.00 0.00 36.97 4.24
170 171 3.430895 GCTTTAAACACACGCTACTGCTA 59.569 43.478 0.00 0.00 36.97 3.49
171 172 4.434330 GCTTTAAACACACGCTACTGCTAG 60.434 45.833 0.00 0.00 36.97 3.42
172 173 2.080286 AAACACACGCTACTGCTAGG 57.920 50.000 0.00 0.00 36.97 3.02
173 174 0.246635 AACACACGCTACTGCTAGGG 59.753 55.000 0.00 0.00 38.59 3.53
174 175 0.898789 ACACACGCTACTGCTAGGGT 60.899 55.000 0.00 0.00 44.83 4.34
175 176 0.246635 CACACGCTACTGCTAGGGTT 59.753 55.000 0.54 0.00 42.10 4.11
176 177 0.974383 ACACGCTACTGCTAGGGTTT 59.026 50.000 0.54 0.00 42.10 3.27
177 178 1.346722 ACACGCTACTGCTAGGGTTTT 59.653 47.619 0.54 0.00 42.10 2.43
178 179 2.000447 CACGCTACTGCTAGGGTTTTC 59.000 52.381 0.54 0.00 42.10 2.29
179 180 1.066358 ACGCTACTGCTAGGGTTTTCC 60.066 52.381 0.00 0.00 42.10 3.13
191 192 2.414994 GGTTTTCCCTAGTAGTGGGC 57.585 55.000 0.00 0.00 44.23 5.36
192 193 1.406477 GGTTTTCCCTAGTAGTGGGCG 60.406 57.143 0.00 0.00 44.23 6.13
193 194 0.906775 TTTTCCCTAGTAGTGGGCGG 59.093 55.000 0.00 0.00 44.23 6.13
194 195 0.979187 TTTCCCTAGTAGTGGGCGGG 60.979 60.000 0.00 0.00 44.23 6.13
195 196 1.877672 TTCCCTAGTAGTGGGCGGGA 61.878 60.000 0.00 0.00 44.23 5.14
196 197 1.833049 CCCTAGTAGTGGGCGGGAG 60.833 68.421 0.00 0.00 37.99 4.30
197 198 1.833049 CCTAGTAGTGGGCGGGAGG 60.833 68.421 0.00 0.00 0.00 4.30
211 212 4.625781 GAGGCGGCGGCGTAGTAG 62.626 72.222 32.35 3.84 41.24 2.57
215 216 4.189188 CGGCGGCGTAGTAGTGCT 62.189 66.667 24.74 0.00 0.00 4.40
216 217 2.827051 CGGCGGCGTAGTAGTGCTA 61.827 63.158 24.74 0.00 0.00 3.49
217 218 1.008767 GGCGGCGTAGTAGTGCTAG 60.009 63.158 9.37 0.00 0.00 3.42
218 219 1.008767 GCGGCGTAGTAGTGCTAGG 60.009 63.158 9.37 3.84 38.29 3.02
220 221 4.610844 GCGTAGTAGTGCTAGGCG 57.389 61.111 15.55 5.69 46.94 5.52
221 222 1.726265 GCGTAGTAGTGCTAGGCGT 59.274 57.895 15.55 0.00 46.94 5.68
222 223 0.940126 GCGTAGTAGTGCTAGGCGTA 59.060 55.000 15.55 0.00 46.94 4.42
223 224 1.070041 GCGTAGTAGTGCTAGGCGTAG 60.070 57.143 15.55 9.11 46.94 3.51
224 225 2.208431 CGTAGTAGTGCTAGGCGTAGT 58.792 52.381 14.52 0.00 0.00 2.73
225 226 2.611292 CGTAGTAGTGCTAGGCGTAGTT 59.389 50.000 14.52 4.35 0.00 2.24
226 227 3.804325 CGTAGTAGTGCTAGGCGTAGTTA 59.196 47.826 14.52 2.37 0.00 2.24
227 228 4.450419 CGTAGTAGTGCTAGGCGTAGTTAT 59.550 45.833 14.52 3.99 0.00 1.89
228 229 5.049818 CGTAGTAGTGCTAGGCGTAGTTATT 60.050 44.000 14.52 4.66 0.00 1.40
229 230 5.848833 AGTAGTGCTAGGCGTAGTTATTT 57.151 39.130 14.52 0.63 0.00 1.40
230 231 6.218108 AGTAGTGCTAGGCGTAGTTATTTT 57.782 37.500 14.52 0.00 0.00 1.82
231 232 6.637657 AGTAGTGCTAGGCGTAGTTATTTTT 58.362 36.000 14.52 0.00 0.00 1.94
284 285 6.539324 TGAATAAAATCGCCTAGTTTGAACG 58.461 36.000 0.00 0.00 0.00 3.95
285 286 6.369340 TGAATAAAATCGCCTAGTTTGAACGA 59.631 34.615 0.00 0.00 37.15 3.85
286 287 6.730960 ATAAAATCGCCTAGTTTGAACGAA 57.269 33.333 0.00 0.00 36.22 3.85
287 288 5.622770 AAAATCGCCTAGTTTGAACGAAT 57.377 34.783 0.00 0.00 36.22 3.34
288 289 5.622770 AAATCGCCTAGTTTGAACGAATT 57.377 34.783 0.00 0.00 36.22 2.17
289 290 5.622770 AATCGCCTAGTTTGAACGAATTT 57.377 34.783 0.00 0.00 36.22 1.82
290 291 4.398549 TCGCCTAGTTTGAACGAATTTG 57.601 40.909 0.00 0.00 0.00 2.32
291 292 3.810941 TCGCCTAGTTTGAACGAATTTGT 59.189 39.130 0.00 0.00 0.00 2.83
292 293 3.906008 CGCCTAGTTTGAACGAATTTGTG 59.094 43.478 0.00 0.00 0.00 3.33
293 294 4.553938 CGCCTAGTTTGAACGAATTTGTGT 60.554 41.667 0.00 0.00 0.00 3.72
294 295 5.278604 GCCTAGTTTGAACGAATTTGTGTT 58.721 37.500 0.00 0.00 0.00 3.32
295 296 5.173131 GCCTAGTTTGAACGAATTTGTGTTG 59.827 40.000 0.00 0.00 0.00 3.33
296 297 6.262601 CCTAGTTTGAACGAATTTGTGTTGT 58.737 36.000 0.00 0.00 0.00 3.32
297 298 6.196353 CCTAGTTTGAACGAATTTGTGTTGTG 59.804 38.462 0.00 0.00 0.00 3.33
298 299 5.465935 AGTTTGAACGAATTTGTGTTGTGT 58.534 33.333 0.00 0.00 0.00 3.72
299 300 5.923684 AGTTTGAACGAATTTGTGTTGTGTT 59.076 32.000 0.00 0.00 0.00 3.32
300 301 6.422400 AGTTTGAACGAATTTGTGTTGTGTTT 59.578 30.769 0.00 0.00 0.00 2.83
301 302 5.753713 TGAACGAATTTGTGTTGTGTTTG 57.246 34.783 0.00 0.00 0.00 2.93
302 303 4.623167 TGAACGAATTTGTGTTGTGTTTGG 59.377 37.500 0.00 0.00 0.00 3.28
303 304 2.926838 ACGAATTTGTGTTGTGTTTGGC 59.073 40.909 0.00 0.00 0.00 4.52
304 305 2.283884 CGAATTTGTGTTGTGTTTGGCC 59.716 45.455 0.00 0.00 0.00 5.36
305 306 1.933247 ATTTGTGTTGTGTTTGGCCG 58.067 45.000 0.00 0.00 0.00 6.13
306 307 0.888619 TTTGTGTTGTGTTTGGCCGA 59.111 45.000 0.00 0.00 0.00 5.54
307 308 1.107114 TTGTGTTGTGTTTGGCCGAT 58.893 45.000 0.00 0.00 0.00 4.18
308 309 1.107114 TGTGTTGTGTTTGGCCGATT 58.893 45.000 0.00 0.00 0.00 3.34
309 310 1.478510 TGTGTTGTGTTTGGCCGATTT 59.521 42.857 0.00 0.00 0.00 2.17
310 311 2.093973 TGTGTTGTGTTTGGCCGATTTT 60.094 40.909 0.00 0.00 0.00 1.82
311 312 2.538037 GTGTTGTGTTTGGCCGATTTTC 59.462 45.455 0.00 0.00 0.00 2.29
312 313 2.428890 TGTTGTGTTTGGCCGATTTTCT 59.571 40.909 0.00 0.00 0.00 2.52
313 314 3.118956 TGTTGTGTTTGGCCGATTTTCTT 60.119 39.130 0.00 0.00 0.00 2.52
314 315 3.810310 TGTGTTTGGCCGATTTTCTTT 57.190 38.095 0.00 0.00 0.00 2.52
315 316 4.130286 TGTGTTTGGCCGATTTTCTTTT 57.870 36.364 0.00 0.00 0.00 2.27
316 317 4.508662 TGTGTTTGGCCGATTTTCTTTTT 58.491 34.783 0.00 0.00 0.00 1.94
317 318 4.568760 TGTGTTTGGCCGATTTTCTTTTTC 59.431 37.500 0.00 0.00 0.00 2.29
318 319 4.568760 GTGTTTGGCCGATTTTCTTTTTCA 59.431 37.500 0.00 0.00 0.00 2.69
319 320 5.064071 GTGTTTGGCCGATTTTCTTTTTCAA 59.936 36.000 0.00 0.00 0.00 2.69
320 321 5.643777 TGTTTGGCCGATTTTCTTTTTCAAA 59.356 32.000 0.00 0.00 0.00 2.69
321 322 6.149474 TGTTTGGCCGATTTTCTTTTTCAAAA 59.851 30.769 0.00 0.00 0.00 2.44
322 323 6.743575 TTGGCCGATTTTCTTTTTCAAAAA 57.256 29.167 0.00 0.00 0.00 1.94
336 337 3.292159 AAAAACGGCGTCTGGGGC 61.292 61.111 15.17 0.00 0.00 5.80
337 338 3.785122 AAAAACGGCGTCTGGGGCT 62.785 57.895 15.17 0.00 0.00 5.19
345 346 4.729918 GTCTGGGGCTGTGGCTGG 62.730 72.222 0.00 0.00 38.73 4.85
346 347 4.980592 TCTGGGGCTGTGGCTGGA 62.981 66.667 0.00 0.00 38.73 3.86
347 348 3.970410 CTGGGGCTGTGGCTGGAA 61.970 66.667 0.00 0.00 38.73 3.53
348 349 3.506743 TGGGGCTGTGGCTGGAAA 61.507 61.111 0.00 0.00 38.73 3.13
349 350 2.203625 GGGGCTGTGGCTGGAAAA 60.204 61.111 0.00 0.00 38.73 2.29
350 351 2.574018 GGGGCTGTGGCTGGAAAAC 61.574 63.158 0.00 0.00 38.73 2.43
351 352 2.574018 GGGCTGTGGCTGGAAAACC 61.574 63.158 0.00 0.00 38.73 3.27
352 353 2.644992 GCTGTGGCTGGAAAACCG 59.355 61.111 0.00 0.00 35.22 4.44
353 354 1.896660 GCTGTGGCTGGAAAACCGA 60.897 57.895 0.00 0.00 35.22 4.69
354 355 1.244019 GCTGTGGCTGGAAAACCGAT 61.244 55.000 0.00 0.00 35.22 4.18
355 356 1.247567 CTGTGGCTGGAAAACCGATT 58.752 50.000 0.00 0.00 0.00 3.34
356 357 0.958091 TGTGGCTGGAAAACCGATTG 59.042 50.000 0.00 0.00 0.00 2.67
357 358 0.388520 GTGGCTGGAAAACCGATTGC 60.389 55.000 0.00 0.00 0.00 3.56
358 359 1.215382 GGCTGGAAAACCGATTGCC 59.785 57.895 0.00 0.00 37.22 4.52
359 360 1.215382 GCTGGAAAACCGATTGCCC 59.785 57.895 0.00 0.00 35.56 5.36
360 361 1.506262 CTGGAAAACCGATTGCCCG 59.494 57.895 0.00 0.00 35.56 6.13
361 362 2.180769 GGAAAACCGATTGCCCGC 59.819 61.111 0.00 0.00 29.04 6.13
362 363 2.631580 GGAAAACCGATTGCCCGCA 61.632 57.895 0.00 0.00 29.04 5.69
363 364 1.443702 GAAAACCGATTGCCCGCAC 60.444 57.895 0.00 0.00 0.00 5.34
364 365 2.812542 GAAAACCGATTGCCCGCACC 62.813 60.000 0.00 0.00 0.00 5.01
368 369 3.202001 CGATTGCCCGCACCGAAT 61.202 61.111 5.10 0.00 0.00 3.34
369 370 2.760159 CGATTGCCCGCACCGAATT 61.760 57.895 5.10 0.00 0.00 2.17
370 371 1.510844 GATTGCCCGCACCGAATTT 59.489 52.632 0.00 0.00 0.00 1.82
371 372 0.736053 GATTGCCCGCACCGAATTTA 59.264 50.000 0.00 0.00 0.00 1.40
372 373 1.336755 GATTGCCCGCACCGAATTTAT 59.663 47.619 0.00 0.00 0.00 1.40
373 374 0.736053 TTGCCCGCACCGAATTTATC 59.264 50.000 0.00 0.00 0.00 1.75
384 385 3.183237 CGAATTTATCGCCGATTTCCC 57.817 47.619 4.31 0.00 45.89 3.97
385 386 2.095919 CGAATTTATCGCCGATTTCCCC 60.096 50.000 4.31 0.00 45.89 4.81
386 387 1.905637 ATTTATCGCCGATTTCCCCC 58.094 50.000 4.31 0.00 0.00 5.40
387 388 0.547075 TTTATCGCCGATTTCCCCCA 59.453 50.000 4.31 0.00 0.00 4.96
388 389 0.107831 TTATCGCCGATTTCCCCCAG 59.892 55.000 4.31 0.00 0.00 4.45
389 390 1.764571 TATCGCCGATTTCCCCCAGG 61.765 60.000 4.31 0.00 0.00 4.45
392 393 4.875713 CCGATTTCCCCCAGGCGG 62.876 72.222 0.00 0.00 0.00 6.13
400 401 4.875713 CCCCAGGCGGCGCTATTT 62.876 66.667 32.30 12.21 0.00 1.40
401 402 3.279875 CCCAGGCGGCGCTATTTC 61.280 66.667 32.30 14.71 0.00 2.17
402 403 2.513666 CCAGGCGGCGCTATTTCA 60.514 61.111 32.30 0.00 0.00 2.69
403 404 2.112198 CCAGGCGGCGCTATTTCAA 61.112 57.895 32.30 0.00 0.00 2.69
404 405 1.353103 CAGGCGGCGCTATTTCAAG 59.647 57.895 32.30 7.45 0.00 3.02
405 406 2.024729 GGCGGCGCTATTTCAAGC 59.975 61.111 32.30 7.60 39.21 4.01
406 407 2.024729 GCGGCGCTATTTCAAGCC 59.975 61.111 26.86 0.00 45.67 4.35
407 408 2.472909 GCGGCGCTATTTCAAGCCT 61.473 57.895 26.86 0.00 46.85 4.58
408 409 1.643832 CGGCGCTATTTCAAGCCTC 59.356 57.895 7.64 0.00 46.85 4.70
409 410 0.811616 CGGCGCTATTTCAAGCCTCT 60.812 55.000 7.64 0.00 46.85 3.69
410 411 0.659957 GGCGCTATTTCAAGCCTCTG 59.340 55.000 7.64 0.00 45.67 3.35
411 412 0.659957 GCGCTATTTCAAGCCTCTGG 59.340 55.000 0.00 0.00 39.43 3.86
412 413 1.303309 CGCTATTTCAAGCCTCTGGG 58.697 55.000 0.00 0.00 39.43 4.45
413 414 1.685148 GCTATTTCAAGCCTCTGGGG 58.315 55.000 0.00 0.00 36.45 4.96
414 415 1.752084 GCTATTTCAAGCCTCTGGGGG 60.752 57.143 0.00 0.00 36.45 5.40
421 422 4.785453 GCCTCTGGGGGCGAACAG 62.785 72.222 0.00 0.00 42.82 3.16
431 432 3.096791 GCGAACAGCTGGAGATGC 58.903 61.111 19.93 10.58 44.04 3.91
432 433 1.449246 GCGAACAGCTGGAGATGCT 60.449 57.895 19.93 0.00 44.04 3.79
433 434 1.427592 GCGAACAGCTGGAGATGCTC 61.428 60.000 19.93 1.91 44.04 4.26
434 435 0.175302 CGAACAGCTGGAGATGCTCT 59.825 55.000 19.93 0.00 38.92 4.09
435 436 1.406898 CGAACAGCTGGAGATGCTCTA 59.593 52.381 19.93 0.00 38.92 2.43
436 437 2.159184 CGAACAGCTGGAGATGCTCTAA 60.159 50.000 19.93 0.00 38.92 2.10
437 438 2.977772 ACAGCTGGAGATGCTCTAAC 57.022 50.000 19.93 0.00 38.92 2.34
438 439 2.182827 ACAGCTGGAGATGCTCTAACA 58.817 47.619 19.93 0.00 38.92 2.41
439 440 2.568956 ACAGCTGGAGATGCTCTAACAA 59.431 45.455 19.93 0.00 38.92 2.83
440 441 3.008375 ACAGCTGGAGATGCTCTAACAAA 59.992 43.478 19.93 0.00 38.92 2.83
441 442 4.005650 CAGCTGGAGATGCTCTAACAAAA 58.994 43.478 5.57 0.00 38.92 2.44
442 443 4.006319 AGCTGGAGATGCTCTAACAAAAC 58.994 43.478 0.00 0.00 35.67 2.43
443 444 3.753272 GCTGGAGATGCTCTAACAAAACA 59.247 43.478 0.00 0.00 0.00 2.83
444 445 4.142730 GCTGGAGATGCTCTAACAAAACAG 60.143 45.833 0.00 0.00 0.00 3.16
445 446 3.753272 TGGAGATGCTCTAACAAAACAGC 59.247 43.478 0.00 0.00 0.00 4.40
446 447 3.127721 GGAGATGCTCTAACAAAACAGCC 59.872 47.826 0.00 0.00 0.00 4.85
447 448 3.084786 AGATGCTCTAACAAAACAGCCC 58.915 45.455 0.00 0.00 0.00 5.19
448 449 1.616159 TGCTCTAACAAAACAGCCCC 58.384 50.000 0.00 0.00 0.00 5.80
449 450 0.521735 GCTCTAACAAAACAGCCCCG 59.478 55.000 0.00 0.00 0.00 5.73
450 451 1.165270 CTCTAACAAAACAGCCCCGG 58.835 55.000 0.00 0.00 0.00 5.73
451 452 0.766131 TCTAACAAAACAGCCCCGGA 59.234 50.000 0.73 0.00 0.00 5.14
452 453 0.879090 CTAACAAAACAGCCCCGGAC 59.121 55.000 0.73 0.00 0.00 4.79
453 454 0.183014 TAACAAAACAGCCCCGGACA 59.817 50.000 0.73 0.00 0.00 4.02
454 455 1.106944 AACAAAACAGCCCCGGACAG 61.107 55.000 0.73 0.00 0.00 3.51
455 456 1.228124 CAAAACAGCCCCGGACAGA 60.228 57.895 0.73 0.00 0.00 3.41
456 457 0.821711 CAAAACAGCCCCGGACAGAA 60.822 55.000 0.73 0.00 0.00 3.02
457 458 0.106419 AAAACAGCCCCGGACAGAAA 60.106 50.000 0.73 0.00 0.00 2.52
458 459 0.106419 AAACAGCCCCGGACAGAAAA 60.106 50.000 0.73 0.00 0.00 2.29
459 460 0.106419 AACAGCCCCGGACAGAAAAA 60.106 50.000 0.73 0.00 0.00 1.94
477 478 3.043340 AAAAACACAGCCACGTTGC 57.957 47.368 2.86 2.86 0.00 4.17
478 479 0.244994 AAAAACACAGCCACGTTGCA 59.755 45.000 14.67 0.00 0.00 4.08
479 480 0.457681 AAAACACAGCCACGTTGCAC 60.458 50.000 14.67 0.00 0.00 4.57
480 481 1.590610 AAACACAGCCACGTTGCACA 61.591 50.000 14.67 0.00 0.00 4.57
481 482 1.992233 AACACAGCCACGTTGCACAG 61.992 55.000 14.67 5.85 0.00 3.66
482 483 2.124736 ACAGCCACGTTGCACAGT 60.125 55.556 14.67 6.48 0.00 3.55
483 484 2.328989 CAGCCACGTTGCACAGTG 59.671 61.111 14.67 12.41 38.05 3.66
484 485 2.124736 AGCCACGTTGCACAGTGT 60.125 55.556 14.67 0.00 36.69 3.55
528 529 0.379316 AACACGCGGGAACAACTTTC 59.621 50.000 19.19 0.00 0.00 2.62
550 553 0.799534 CTGTTGCGCTGCCTTTATGC 60.800 55.000 9.73 0.00 0.00 3.14
557 560 1.373570 GCTGCCTTTATGCTTCGTCT 58.626 50.000 0.00 0.00 0.00 4.18
565 568 1.667236 TATGCTTCGTCTGGGCAATG 58.333 50.000 0.00 0.00 39.46 2.82
600 608 1.860078 GTGGCCAGAAACGACGAAG 59.140 57.895 5.11 0.00 0.00 3.79
621 629 3.118454 CATGCCACGACGGGACAC 61.118 66.667 0.00 0.00 38.34 3.67
637 645 1.495509 CACGTATGGTGCGTTGTGG 59.504 57.895 0.00 0.00 40.90 4.17
638 646 1.669760 ACGTATGGTGCGTTGTGGG 60.670 57.895 0.00 0.00 39.79 4.61
639 647 2.874751 GTATGGTGCGTTGTGGGC 59.125 61.111 0.00 0.00 0.00 5.36
640 648 2.744318 TATGGTGCGTTGTGGGCG 60.744 61.111 0.00 0.00 0.00 6.13
641 649 3.538785 TATGGTGCGTTGTGGGCGT 62.539 57.895 0.00 0.00 0.00 5.68
654 662 1.877443 GTGGGCGTGTGTGTATCTTTT 59.123 47.619 0.00 0.00 0.00 2.27
689 697 2.081425 TTTGCGCCTTTGCCACGATT 62.081 50.000 4.18 0.00 0.00 3.34
690 698 2.081425 TTGCGCCTTTGCCACGATTT 62.081 50.000 4.18 0.00 0.00 2.17
741 756 1.134226 GCAGCACTTTCACATGCAAC 58.866 50.000 0.00 0.00 44.59 4.17
742 757 1.269413 GCAGCACTTTCACATGCAACT 60.269 47.619 0.00 0.00 44.59 3.16
750 765 1.428448 TCACATGCAACTCGTAGCAC 58.572 50.000 0.00 0.00 44.49 4.40
752 767 0.673644 ACATGCAACTCGTAGCACCC 60.674 55.000 0.00 0.00 44.49 4.61
780 841 5.422331 AGAGAGAGAGAGAGAGGATATACCG 59.578 48.000 0.00 0.00 44.74 4.02
863 1099 1.667212 TCGCGTATCGTATCACACTGT 59.333 47.619 5.77 0.00 39.67 3.55
865 1101 2.286242 CGCGTATCGTATCACACTGTCT 60.286 50.000 0.00 0.00 0.00 3.41
953 1199 2.200370 ACTGTCCTGTCCCGTCCA 59.800 61.111 0.00 0.00 0.00 4.02
954 1200 1.229209 ACTGTCCTGTCCCGTCCAT 60.229 57.895 0.00 0.00 0.00 3.41
969 1215 1.048601 TCCATCACTTCCCGATAGCC 58.951 55.000 0.00 0.00 0.00 3.93
1183 1450 3.148279 CGTAAGCGCCTCTCCCCT 61.148 66.667 2.29 0.00 0.00 4.79
1370 1642 2.880890 GAGCGGCATGATAAACAGGATT 59.119 45.455 1.45 0.00 31.40 3.01
1379 1651 0.322997 TAAACAGGATTGCCGGGGTG 60.323 55.000 2.18 0.00 39.96 4.61
1385 1657 4.652131 ATTGCCGGGGTGTTCGCA 62.652 61.111 2.18 0.00 0.00 5.10
1409 1681 2.423892 GAGAGGCTACAACATCGAGTCA 59.576 50.000 0.00 0.00 0.00 3.41
1460 1732 1.468914 CTCTTCACCATCGTCGTCTCA 59.531 52.381 0.00 0.00 0.00 3.27
1526 1798 2.159960 GCTCGTCAACGTCTTGAATGTC 60.160 50.000 2.09 0.00 38.17 3.06
1553 1825 1.486439 CGTTCCACATTTTGCACCAC 58.514 50.000 0.00 0.00 0.00 4.16
1565 1837 5.365403 TTTTGCACCACTTTATTACTCCG 57.635 39.130 0.00 0.00 0.00 4.63
1566 1838 3.688694 TGCACCACTTTATTACTCCGT 57.311 42.857 0.00 0.00 0.00 4.69
1567 1839 4.804868 TGCACCACTTTATTACTCCGTA 57.195 40.909 0.00 0.00 0.00 4.02
1568 1840 5.347620 TGCACCACTTTATTACTCCGTAT 57.652 39.130 0.00 0.00 0.00 3.06
1569 1841 6.468333 TGCACCACTTTATTACTCCGTATA 57.532 37.500 0.00 0.00 0.00 1.47
1570 1842 7.058023 TGCACCACTTTATTACTCCGTATAT 57.942 36.000 0.00 0.00 0.00 0.86
1571 1843 6.926826 TGCACCACTTTATTACTCCGTATATG 59.073 38.462 0.00 0.00 0.00 1.78
1572 1844 6.367969 GCACCACTTTATTACTCCGTATATGG 59.632 42.308 4.41 4.41 0.00 2.74
1595 1875 3.477210 AGGAGGAGTAAATCATTCGGC 57.523 47.619 0.00 0.00 0.00 5.54
1620 1900 2.136298 TGCCACTTGGTTTCAACAGA 57.864 45.000 0.00 0.00 37.57 3.41
1637 1917 5.760253 TCAACAGACTTCAGAAGATTTCACC 59.240 40.000 17.56 0.00 0.00 4.02
1639 1919 3.681897 CAGACTTCAGAAGATTTCACCGG 59.318 47.826 17.56 0.00 0.00 5.28
1647 1927 3.888930 AGAAGATTTCACCGGCTTCAAAA 59.111 39.130 16.42 5.24 39.27 2.44
1654 1934 3.976169 TCACCGGCTTCAAAATTTTCTG 58.024 40.909 0.00 0.00 0.00 3.02
1732 2112 4.233123 CCGTATTCTGCGGTAATACTCA 57.767 45.455 17.92 0.00 43.84 3.41
1738 2118 4.746535 TCTGCGGTAATACTCAATTCCA 57.253 40.909 0.00 0.00 0.00 3.53
1760 2140 9.851686 TTCCATTATAATCACAGCTTCAATAGT 57.148 29.630 0.00 0.00 0.00 2.12
1761 2141 9.494271 TCCATTATAATCACAGCTTCAATAGTC 57.506 33.333 0.00 0.00 0.00 2.59
1762 2142 9.276590 CCATTATAATCACAGCTTCAATAGTCA 57.723 33.333 0.00 0.00 0.00 3.41
1767 2147 5.784750 TCACAGCTTCAATAGTCATTTCG 57.215 39.130 0.00 0.00 0.00 3.46
1768 2148 5.478407 TCACAGCTTCAATAGTCATTTCGA 58.522 37.500 0.00 0.00 0.00 3.71
1811 2888 9.493206 TTTTTGTGACATTAGTCTTTAAACGTC 57.507 29.630 0.00 0.00 45.20 4.34
2109 3446 6.339587 TGTCGAGCATATATTCACATGGTA 57.660 37.500 0.00 0.00 33.25 3.25
2250 3588 2.461695 AGAACGGACTCACAGATGGAT 58.538 47.619 0.00 0.00 0.00 3.41
2251 3589 2.834549 AGAACGGACTCACAGATGGATT 59.165 45.455 0.00 0.00 0.00 3.01
2252 3590 3.261897 AGAACGGACTCACAGATGGATTT 59.738 43.478 0.00 0.00 0.00 2.17
2279 3618 0.527113 TGCCATTGTGCACATACAGC 59.473 50.000 22.39 20.33 36.04 4.40
2302 3641 7.977853 CAGCATATCCAAAGAAAACAGCTATTT 59.022 33.333 0.00 0.00 0.00 1.40
2318 3657 8.494016 ACAGCTATTTTAACGAATCTAAGCTT 57.506 30.769 3.48 3.48 0.00 3.74
2530 3869 6.632909 TGAATCCAATAAATTGCAGGTTGAG 58.367 36.000 0.00 0.00 36.48 3.02
2608 3947 2.289631 TGAACCAGATCAACGTGCTGAT 60.290 45.455 2.37 2.37 38.79 2.90
2683 4022 2.548057 ACTTCCATACACAGTTGCAACG 59.452 45.455 23.21 19.33 0.00 4.10
2818 4157 4.892433 ACTCTTGATCTCCAACAGTTCTG 58.108 43.478 0.00 0.00 31.22 3.02
2824 4163 6.484364 TGATCTCCAACAGTTCTGCATATA 57.516 37.500 0.00 0.00 0.00 0.86
2866 4213 0.393808 GCCGGGTGAAGCCTTTGATA 60.394 55.000 2.18 0.00 37.43 2.15
2935 4282 0.521735 CGGCACAAAGGAACCTAAGC 59.478 55.000 0.00 0.00 0.00 3.09
3037 4384 4.226427 TCTGAATCATTTGCTGCCTACT 57.774 40.909 0.00 0.00 0.00 2.57
3062 4409 5.888724 TCCACGGGCATATTTTCTTCATTAA 59.111 36.000 0.00 0.00 0.00 1.40
3082 4429 9.542462 TCATTAACTAATTCTTATCTCCCAACG 57.458 33.333 0.00 0.00 0.00 4.10
3256 4603 1.208535 CAGTGCCGGGGTATGTTTCTA 59.791 52.381 2.18 0.00 0.00 2.10
3268 4615 7.545965 CGGGGTATGTTTCTATGCTTATAAGAG 59.454 40.741 16.85 5.09 0.00 2.85
3288 4635 5.133221 AGAGTAACTCAATGTTTGTTGCCT 58.867 37.500 0.00 0.00 39.89 4.75
3294 4641 6.655078 ACTCAATGTTTGTTGCCTATTTCT 57.345 33.333 0.00 0.00 0.00 2.52
3317 4664 6.761714 TCTTCTTGTTCTTCTTGTCCTGTTAC 59.238 38.462 0.00 0.00 0.00 2.50
3321 4668 5.741011 TGTTCTTCTTGTCCTGTTACAACT 58.259 37.500 0.00 0.00 35.56 3.16
3325 4672 5.584649 TCTTCTTGTCCTGTTACAACTGTTG 59.415 40.000 18.44 18.44 35.56 3.33
3339 4686 1.944709 ACTGTTGTAAAAGGTGGCGTC 59.055 47.619 0.00 0.00 0.00 5.19
3396 4743 9.341899 CTGTTTGCAGATTAAATACTTGGTAAC 57.658 33.333 0.00 0.00 45.28 2.50
3487 4834 7.526142 AGATCTTGCGAACTGGTATATCTTA 57.474 36.000 0.00 0.00 0.00 2.10
3549 4897 2.359900 CACCAGTAGAAATCCCAGTGC 58.640 52.381 0.00 0.00 0.00 4.40
3558 4906 2.202236 AATCCCAGTGCAGCCATCGT 62.202 55.000 0.00 0.00 0.00 3.73
3615 4963 9.158097 AGTTTGTATACCCGGTTATAGGAAATA 57.842 33.333 0.00 0.00 0.00 1.40
3693 5041 8.547967 TTCATATAAAACTGAAGACCACACTC 57.452 34.615 0.00 0.00 0.00 3.51
3718 5079 5.067283 AGACTTTTAAATGTGCAACCGAAGT 59.933 36.000 11.15 0.00 34.36 3.01
3727 5088 3.499157 TGTGCAACCGAAGTAACATAACC 59.501 43.478 0.00 0.00 34.36 2.85
3733 5094 5.240713 ACCGAAGTAACATAACCGAGTAG 57.759 43.478 0.00 0.00 0.00 2.57
3838 5199 4.091365 GGTTGTTTTGACTTTGAACTGTGC 59.909 41.667 0.00 0.00 0.00 4.57
4075 5436 6.864685 TGTGTTCTCATTTTGCATCTTCATTC 59.135 34.615 0.00 0.00 0.00 2.67
4133 5494 1.815003 AGCTTTAAGCATCACAGTGCC 59.185 47.619 19.63 0.00 45.56 5.01
4161 5522 5.863935 TCGACATGATAATATGTGCTGTAGC 59.136 40.000 0.00 0.00 41.15 3.58
4209 5570 5.811399 TGACTTTGTTTGGTACAGTCAAG 57.189 39.130 7.32 0.00 42.39 3.02
4297 5658 2.347490 GTCTTTGCTCGCAGGGGA 59.653 61.111 0.00 0.00 0.00 4.81
4463 5825 3.635373 CCTGGAACTGATGAATCCATTGG 59.365 47.826 0.00 0.00 42.12 3.16
4516 5878 7.869016 ATCGATGTACATAAGGTAAATGACG 57.131 36.000 8.71 3.68 29.71 4.35
4557 5919 7.970061 TCAATCATTTGTGCTAGCAAATACTTC 59.030 33.333 21.29 5.57 44.42 3.01
4565 5927 3.875134 GCTAGCAAATACTTCGGGCTAAA 59.125 43.478 10.63 0.00 36.71 1.85
4656 6018 7.227873 TGGTTATCAAAGTATCTGGAAACACA 58.772 34.615 0.00 0.00 35.60 3.72
4845 6452 7.712205 GGAACAGTTGTTTGGTAGTAAACTAGA 59.288 37.037 0.00 0.00 40.36 2.43
4879 6569 8.772705 TGAATTGTTGGCATAAAAAGATTGAAC 58.227 29.630 0.00 0.00 0.00 3.18
4911 6601 5.666462 TGACTGCAACTATTTATTCCGCTA 58.334 37.500 0.00 0.00 0.00 4.26
5023 6861 4.771903 TGGTTGCACTACAAAGACTGTTA 58.228 39.130 0.00 0.00 40.82 2.41
5051 6889 6.240894 CCTTATGGCATATGTGAGGTATGTT 58.759 40.000 8.24 0.00 33.19 2.71
5054 6892 4.450976 TGGCATATGTGAGGTATGTTGAC 58.549 43.478 4.29 0.00 33.19 3.18
5069 6907 4.370364 TGTTGACTGTTTTTGCCTCTTC 57.630 40.909 0.00 0.00 0.00 2.87
5070 6908 3.761218 TGTTGACTGTTTTTGCCTCTTCA 59.239 39.130 0.00 0.00 0.00 3.02
5143 6982 4.712122 TTTTTCTTCCGTTTTGCTGTCT 57.288 36.364 0.00 0.00 0.00 3.41
5153 6992 5.088739 CCGTTTTGCTGTCTTATTGATGAC 58.911 41.667 0.00 0.00 0.00 3.06
5232 7071 5.359576 AGTTTGCAAGTAATTTCTGTCCACA 59.640 36.000 0.00 0.00 0.00 4.17
5284 7123 4.314740 TGCTTGGTATTGTTTGTCAACC 57.685 40.909 0.00 0.00 38.97 3.77
5362 7468 0.179009 AAGCTTTGTCTGCAGCCTGA 60.179 50.000 9.47 0.00 36.62 3.86
5364 7470 1.874562 CTTTGTCTGCAGCCTGAGC 59.125 57.895 9.47 0.00 40.32 4.26
5697 7803 4.074970 CCTCTGGACATGCATTTATACCC 58.925 47.826 0.00 0.00 0.00 3.69
5754 7860 8.519799 TCCCTGGAACAATAAATCTTTATGTC 57.480 34.615 0.00 0.00 38.70 3.06
5791 7897 7.385752 CAGAATGCTTTATTTGTGTTCAACCAT 59.614 33.333 0.00 0.00 32.93 3.55
5814 7924 8.204160 CCATTTCTTTTTCCCTGAAAACTAACT 58.796 33.333 1.69 0.00 40.56 2.24
5815 7925 9.249457 CATTTCTTTTTCCCTGAAAACTAACTC 57.751 33.333 1.69 0.00 40.56 3.01
5830 7940 2.682155 AACTCGATGCTTTCCTCTCC 57.318 50.000 0.00 0.00 0.00 3.71
5854 7964 0.537143 TGTTCCACACATGGCAGGTC 60.537 55.000 0.00 0.00 46.80 3.85
5920 8030 1.740285 CAAGTACCTCCGCGGCTAT 59.260 57.895 23.51 10.40 35.61 2.97
5945 8055 6.853720 TCTCTTCCACTGTAATAAGAAGTCG 58.146 40.000 0.00 0.00 36.26 4.18
6009 8121 0.325933 AGCAGAATGTGTAGGCAGCA 59.674 50.000 0.00 0.00 39.31 4.41
6018 8130 2.813754 TGTGTAGGCAGCACATCTTTTC 59.186 45.455 9.53 0.00 41.32 2.29
6030 8142 0.884704 ATCTTTTCGTGCGGCTGTGT 60.885 50.000 0.00 0.00 0.00 3.72
6078 8190 5.189928 TCTGTGGTAATGTGTTGACTTGTT 58.810 37.500 0.00 0.00 0.00 2.83
6123 8235 0.606401 AGTCGAGGTTTGCCCATGTG 60.606 55.000 0.00 0.00 34.66 3.21
6133 8245 2.981560 GCCCATGTGTTGCACCGAG 61.982 63.158 0.00 0.00 32.73 4.63
6146 8258 1.936547 GCACCGAGAAGCAGAATAAGG 59.063 52.381 0.00 0.00 0.00 2.69
6147 8259 2.418746 GCACCGAGAAGCAGAATAAGGA 60.419 50.000 0.00 0.00 0.00 3.36
6148 8260 3.452474 CACCGAGAAGCAGAATAAGGAG 58.548 50.000 0.00 0.00 0.00 3.69
6156 8268 5.130145 AGAAGCAGAATAAGGAGTACATGCT 59.870 40.000 0.00 0.00 44.15 3.79
6166 8278 3.196685 AGGAGTACATGCTTCCTTGTCTC 59.803 47.826 7.28 0.00 32.34 3.36
6181 8293 4.379186 CCTTGTCTCTGCATTGCTTGTAAG 60.379 45.833 10.49 6.99 0.00 2.34
6199 8312 4.759693 TGTAAGCTGTAATTGTCAGTTGGG 59.240 41.667 11.97 0.00 35.60 4.12
6202 8315 3.073062 AGCTGTAATTGTCAGTTGGGACT 59.927 43.478 11.97 0.00 38.61 3.85
6203 8316 4.286032 AGCTGTAATTGTCAGTTGGGACTA 59.714 41.667 11.97 0.00 38.61 2.59
6204 8317 4.631813 GCTGTAATTGTCAGTTGGGACTAG 59.368 45.833 11.97 0.00 38.61 2.57
6205 8318 5.794894 CTGTAATTGTCAGTTGGGACTAGT 58.205 41.667 0.00 0.00 38.61 2.57
6263 8376 6.417044 GTGTATCGCGTACTGAATGAATAAGT 59.583 38.462 5.77 0.00 34.27 2.24
6268 8381 3.302480 CGTACTGAATGAATAAGTGCGGC 60.302 47.826 4.88 0.00 43.45 6.53
6291 8404 1.066430 TCTACCTTGTTGATGCCGGTC 60.066 52.381 1.90 0.00 0.00 4.79
6327 8440 1.226859 TCGCCCGCTATGAACTTCG 60.227 57.895 0.00 0.00 0.00 3.79
6339 8452 7.398746 CGCTATGAACTTCGATGTGATTTTTA 58.601 34.615 4.52 0.00 0.00 1.52
6368 8481 0.320771 AGAGCCTGTTTGTACTGCGG 60.321 55.000 0.00 0.00 0.00 5.69
6369 8482 0.320421 GAGCCTGTTTGTACTGCGGA 60.320 55.000 0.00 0.00 0.00 5.54
6407 8520 3.746492 ACGAGCAAAGAGGTTATTGACAC 59.254 43.478 0.00 0.00 0.00 3.67
6434 8547 2.359850 GATGTTGGCGGTGCTCCA 60.360 61.111 5.52 0.00 0.00 3.86
6441 8554 2.260434 GCGGTGCTCCAGTACGAA 59.740 61.111 5.52 0.00 0.00 3.85
6448 8561 1.226323 CTCCAGTACGAACTCGGCG 60.226 63.158 0.00 0.00 44.95 6.46
6485 8598 2.047274 CGTGGACCACTTCGCCAT 60.047 61.111 22.14 0.00 33.66 4.40
6487 8600 2.359850 TGGACCACTTCGCCATGC 60.360 61.111 0.00 0.00 0.00 4.06
6490 8603 3.027170 GACCACTTCGCCATGCACG 62.027 63.158 0.00 0.30 0.00 5.34
6575 8688 2.900273 GACTACGGATGCCTGCCA 59.100 61.111 0.00 0.00 0.00 4.92
6607 8742 1.451567 CGTCGGCCTCTCTCTACCA 60.452 63.158 0.00 0.00 0.00 3.25
6769 8908 1.134280 CAGACCTCATCGCTGGGATTT 60.134 52.381 4.26 0.00 31.28 2.17
6772 8911 1.281867 ACCTCATCGCTGGGATTTGAA 59.718 47.619 4.26 0.00 31.28 2.69
6802 8941 6.240549 CTTGTACAGGATAAACCCAGATCT 57.759 41.667 0.00 0.00 40.05 2.75
6821 8960 2.038426 TCTTCGTTTCCTGATCTTGCCA 59.962 45.455 0.00 0.00 0.00 4.92
6822 8961 2.099141 TCGTTTCCTGATCTTGCCAG 57.901 50.000 0.00 0.00 0.00 4.85
6823 8962 0.449388 CGTTTCCTGATCTTGCCAGC 59.551 55.000 0.00 0.00 0.00 4.85
6824 8963 0.449388 GTTTCCTGATCTTGCCAGCG 59.551 55.000 0.00 0.00 0.00 5.18
6825 8964 0.036732 TTTCCTGATCTTGCCAGCGT 59.963 50.000 0.00 0.00 0.00 5.07
6826 8965 0.036732 TTCCTGATCTTGCCAGCGTT 59.963 50.000 0.00 0.00 0.00 4.84
6850 8989 9.706691 GTTATTTGCAGTACCTATATAGCTTGA 57.293 33.333 4.04 0.00 0.00 3.02
6868 9011 2.098614 TGAGCTGAGCTGTAGGAGAAG 58.901 52.381 13.71 0.00 39.88 2.85
6881 9024 6.983890 GCTGTAGGAGAAGAAAGAGAATTAGG 59.016 42.308 0.00 0.00 0.00 2.69
6882 9025 7.425224 TGTAGGAGAAGAAAGAGAATTAGGG 57.575 40.000 0.00 0.00 0.00 3.53
6883 9026 7.189794 TGTAGGAGAAGAAAGAGAATTAGGGA 58.810 38.462 0.00 0.00 0.00 4.20
6884 9027 7.846823 TGTAGGAGAAGAAAGAGAATTAGGGAT 59.153 37.037 0.00 0.00 0.00 3.85
6885 9028 7.135591 AGGAGAAGAAAGAGAATTAGGGATG 57.864 40.000 0.00 0.00 0.00 3.51
6886 9029 5.762711 GGAGAAGAAAGAGAATTAGGGATGC 59.237 44.000 0.00 0.00 0.00 3.91
6887 9030 6.319048 AGAAGAAAGAGAATTAGGGATGCA 57.681 37.500 0.00 0.00 0.00 3.96
6888 9031 6.355747 AGAAGAAAGAGAATTAGGGATGCAG 58.644 40.000 0.00 0.00 0.00 4.41
6889 9032 5.965033 AGAAAGAGAATTAGGGATGCAGA 57.035 39.130 0.00 0.00 0.00 4.26
6890 9033 6.319048 AGAAAGAGAATTAGGGATGCAGAA 57.681 37.500 0.00 0.00 0.00 3.02
6891 9034 6.355747 AGAAAGAGAATTAGGGATGCAGAAG 58.644 40.000 0.00 0.00 0.00 2.85
6892 9035 4.084011 AGAGAATTAGGGATGCAGAAGC 57.916 45.455 0.00 0.00 42.57 3.86
6904 9047 2.915738 GCAGAAGCACTTGGATCTTG 57.084 50.000 0.00 0.00 41.58 3.02
6905 9048 1.135460 GCAGAAGCACTTGGATCTTGC 60.135 52.381 0.00 0.00 41.58 4.01
6906 9049 1.471684 CAGAAGCACTTGGATCTTGCC 59.528 52.381 0.00 0.00 36.91 4.52
6907 9050 1.353694 AGAAGCACTTGGATCTTGCCT 59.646 47.619 0.00 0.00 36.91 4.75
6908 9051 2.165998 GAAGCACTTGGATCTTGCCTT 58.834 47.619 0.00 0.00 36.91 4.35
6909 9052 1.831580 AGCACTTGGATCTTGCCTTC 58.168 50.000 0.00 0.00 36.91 3.46
6910 9053 0.813821 GCACTTGGATCTTGCCTTCC 59.186 55.000 0.00 0.00 0.00 3.46
6911 9054 1.887956 GCACTTGGATCTTGCCTTCCA 60.888 52.381 0.00 0.00 40.24 3.53
6912 9055 2.089980 CACTTGGATCTTGCCTTCCAG 58.910 52.381 0.00 0.00 42.73 3.86
6913 9056 1.707427 ACTTGGATCTTGCCTTCCAGT 59.293 47.619 0.00 0.00 42.73 4.00
6914 9057 2.108952 ACTTGGATCTTGCCTTCCAGTT 59.891 45.455 0.00 0.00 42.73 3.16
6915 9058 2.205022 TGGATCTTGCCTTCCAGTTG 57.795 50.000 0.00 0.00 37.10 3.16
6916 9059 1.704628 TGGATCTTGCCTTCCAGTTGA 59.295 47.619 0.00 0.00 37.10 3.18
6917 9060 2.087646 GGATCTTGCCTTCCAGTTGAC 58.912 52.381 0.00 0.00 31.99 3.18
6918 9061 1.734465 GATCTTGCCTTCCAGTTGACG 59.266 52.381 0.00 0.00 0.00 4.35
6919 9062 0.468226 TCTTGCCTTCCAGTTGACGT 59.532 50.000 0.00 0.00 0.00 4.34
6920 9063 0.868406 CTTGCCTTCCAGTTGACGTC 59.132 55.000 9.11 9.11 0.00 4.34
6921 9064 0.534203 TTGCCTTCCAGTTGACGTCC 60.534 55.000 14.12 0.00 0.00 4.79
6922 9065 1.070786 GCCTTCCAGTTGACGTCCA 59.929 57.895 14.12 0.00 0.00 4.02
6923 9066 0.321653 GCCTTCCAGTTGACGTCCAT 60.322 55.000 14.12 0.00 0.00 3.41
6924 9067 1.066430 GCCTTCCAGTTGACGTCCATA 60.066 52.381 14.12 0.00 0.00 2.74
6925 9068 2.420129 GCCTTCCAGTTGACGTCCATAT 60.420 50.000 14.12 0.00 0.00 1.78
6926 9069 3.198068 CCTTCCAGTTGACGTCCATATG 58.802 50.000 14.12 6.64 0.00 1.78
6927 9070 3.369471 CCTTCCAGTTGACGTCCATATGT 60.369 47.826 14.12 0.00 0.00 2.29
6928 9071 3.973206 TCCAGTTGACGTCCATATGTT 57.027 42.857 14.12 0.00 0.00 2.71
6929 9072 3.857052 TCCAGTTGACGTCCATATGTTC 58.143 45.455 14.12 0.00 0.00 3.18
6930 9073 2.936498 CCAGTTGACGTCCATATGTTCC 59.064 50.000 14.12 0.00 0.00 3.62
6931 9074 2.936498 CAGTTGACGTCCATATGTTCCC 59.064 50.000 14.12 0.00 0.00 3.97
6932 9075 2.838202 AGTTGACGTCCATATGTTCCCT 59.162 45.455 14.12 0.00 0.00 4.20
6933 9076 3.118738 AGTTGACGTCCATATGTTCCCTC 60.119 47.826 14.12 0.00 0.00 4.30
6934 9077 2.462723 TGACGTCCATATGTTCCCTCA 58.537 47.619 14.12 0.00 0.00 3.86
6935 9078 2.835156 TGACGTCCATATGTTCCCTCAA 59.165 45.455 14.12 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.433441 ACTGGTAATTAGTAGTAGCACCTCT 58.567 40.000 0.83 0.00 30.23 3.69
1 2 6.712179 ACTGGTAATTAGTAGTAGCACCTC 57.288 41.667 0.83 0.00 30.23 3.85
7 8 6.348376 GGAGCGCTACTGGTAATTAGTAGTAG 60.348 46.154 13.91 21.16 45.91 2.57
8 9 5.471456 GGAGCGCTACTGGTAATTAGTAGTA 59.529 44.000 13.91 10.46 45.91 1.82
9 10 4.277921 GGAGCGCTACTGGTAATTAGTAGT 59.722 45.833 13.91 9.98 45.91 2.73
10 11 4.519730 AGGAGCGCTACTGGTAATTAGTAG 59.480 45.833 24.60 8.85 46.57 2.57
11 12 4.467769 AGGAGCGCTACTGGTAATTAGTA 58.532 43.478 24.60 0.00 0.00 1.82
12 13 3.297736 AGGAGCGCTACTGGTAATTAGT 58.702 45.455 24.60 0.00 0.00 2.24
13 14 4.519730 ACTAGGAGCGCTACTGGTAATTAG 59.480 45.833 34.64 22.39 33.10 1.73
14 15 4.277672 CACTAGGAGCGCTACTGGTAATTA 59.722 45.833 34.87 12.06 32.46 1.40
15 16 3.068307 CACTAGGAGCGCTACTGGTAATT 59.932 47.826 34.87 13.07 32.46 1.40
16 17 2.623889 CACTAGGAGCGCTACTGGTAAT 59.376 50.000 34.87 13.45 32.46 1.89
17 18 2.022195 CACTAGGAGCGCTACTGGTAA 58.978 52.381 34.87 14.01 32.46 2.85
18 19 1.676746 CACTAGGAGCGCTACTGGTA 58.323 55.000 34.87 14.40 32.46 3.25
19 20 1.038130 CCACTAGGAGCGCTACTGGT 61.038 60.000 31.06 31.06 35.43 4.00
20 21 0.752009 TCCACTAGGAGCGCTACTGG 60.752 60.000 32.69 31.09 39.61 4.00
21 22 1.103803 TTCCACTAGGAGCGCTACTG 58.896 55.000 32.69 22.66 46.74 2.74
22 23 1.751924 CTTTCCACTAGGAGCGCTACT 59.248 52.381 28.28 28.28 46.74 2.57
23 24 1.803252 GCTTTCCACTAGGAGCGCTAC 60.803 57.143 13.18 13.18 46.74 3.58
24 25 0.460311 GCTTTCCACTAGGAGCGCTA 59.540 55.000 11.50 0.00 46.74 4.26
25 26 1.219393 GCTTTCCACTAGGAGCGCT 59.781 57.895 11.27 11.27 46.74 5.92
26 27 2.167861 CGCTTTCCACTAGGAGCGC 61.168 63.158 0.00 0.00 46.86 5.92
28 29 1.086634 CAGCGCTTTCCACTAGGAGC 61.087 60.000 7.50 0.00 46.74 4.70
29 30 1.086634 GCAGCGCTTTCCACTAGGAG 61.087 60.000 7.50 0.00 46.74 3.69
30 31 1.079127 GCAGCGCTTTCCACTAGGA 60.079 57.895 7.50 0.00 43.93 2.94
31 32 0.175760 TAGCAGCGCTTTCCACTAGG 59.824 55.000 7.50 0.00 40.44 3.02
32 33 1.134965 AGTAGCAGCGCTTTCCACTAG 60.135 52.381 7.50 0.00 40.44 2.57
33 34 0.895530 AGTAGCAGCGCTTTCCACTA 59.104 50.000 7.50 1.67 40.44 2.74
34 35 0.895530 TAGTAGCAGCGCTTTCCACT 59.104 50.000 7.50 11.51 40.44 4.00
35 36 1.661112 CTTAGTAGCAGCGCTTTCCAC 59.339 52.381 7.50 3.33 40.44 4.02
36 37 1.275291 ACTTAGTAGCAGCGCTTTCCA 59.725 47.619 7.50 0.00 40.44 3.53
37 38 1.927838 GACTTAGTAGCAGCGCTTTCC 59.072 52.381 7.50 0.00 40.44 3.13
38 39 1.584308 CGACTTAGTAGCAGCGCTTTC 59.416 52.381 7.50 1.92 40.44 2.62
39 40 1.201647 TCGACTTAGTAGCAGCGCTTT 59.798 47.619 7.50 0.71 40.44 3.51
40 41 0.809385 TCGACTTAGTAGCAGCGCTT 59.191 50.000 7.50 0.00 40.44 4.68
41 42 1.025812 ATCGACTTAGTAGCAGCGCT 58.974 50.000 2.64 2.64 43.41 5.92
42 43 2.682952 TATCGACTTAGTAGCAGCGC 57.317 50.000 0.00 0.00 0.00 5.92
43 44 4.142881 TGCTATATCGACTTAGTAGCAGCG 60.143 45.833 12.25 0.00 41.82 5.18
44 45 5.298197 TGCTATATCGACTTAGTAGCAGC 57.702 43.478 12.25 2.44 41.82 5.25
46 47 7.117956 CACTACTGCTATATCGACTTAGTAGCA 59.882 40.741 16.50 15.38 43.74 3.49
47 48 7.118101 ACACTACTGCTATATCGACTTAGTAGC 59.882 40.741 16.50 12.58 39.60 3.58
48 49 8.436970 CACACTACTGCTATATCGACTTAGTAG 58.563 40.741 15.53 15.53 40.97 2.57
49 50 7.387122 CCACACTACTGCTATATCGACTTAGTA 59.613 40.741 0.00 0.00 0.00 1.82
50 51 6.205076 CCACACTACTGCTATATCGACTTAGT 59.795 42.308 0.00 0.00 0.00 2.24
51 52 6.205076 ACCACACTACTGCTATATCGACTTAG 59.795 42.308 0.00 0.00 0.00 2.18
52 53 6.060136 ACCACACTACTGCTATATCGACTTA 58.940 40.000 0.00 0.00 0.00 2.24
53 54 4.888239 ACCACACTACTGCTATATCGACTT 59.112 41.667 0.00 0.00 0.00 3.01
54 55 4.462133 ACCACACTACTGCTATATCGACT 58.538 43.478 0.00 0.00 0.00 4.18
55 56 4.320348 GGACCACACTACTGCTATATCGAC 60.320 50.000 0.00 0.00 0.00 4.20
56 57 3.819337 GGACCACACTACTGCTATATCGA 59.181 47.826 0.00 0.00 0.00 3.59
57 58 3.365064 CGGACCACACTACTGCTATATCG 60.365 52.174 0.00 0.00 0.00 2.92
58 59 3.819337 TCGGACCACACTACTGCTATATC 59.181 47.826 0.00 0.00 0.00 1.63
59 60 3.568853 GTCGGACCACACTACTGCTATAT 59.431 47.826 0.00 0.00 0.00 0.86
60 61 2.947652 GTCGGACCACACTACTGCTATA 59.052 50.000 0.00 0.00 0.00 1.31
61 62 1.749634 GTCGGACCACACTACTGCTAT 59.250 52.381 0.00 0.00 0.00 2.97
62 63 1.171308 GTCGGACCACACTACTGCTA 58.829 55.000 0.00 0.00 0.00 3.49
63 64 0.826256 TGTCGGACCACACTACTGCT 60.826 55.000 5.55 0.00 0.00 4.24
64 65 0.666577 GTGTCGGACCACACTACTGC 60.667 60.000 15.74 0.00 43.00 4.40
65 66 0.671796 TGTGTCGGACCACACTACTG 59.328 55.000 20.65 0.00 45.98 2.74
66 67 3.120796 TGTGTCGGACCACACTACT 57.879 52.632 20.65 0.00 45.98 2.57
71 72 2.194889 TAGCGTGTGTCGGACCACA 61.195 57.895 21.43 15.62 42.81 4.17
72 73 1.731969 GTAGCGTGTGTCGGACCAC 60.732 63.158 15.46 15.46 40.26 4.16
73 74 1.900016 AGTAGCGTGTGTCGGACCA 60.900 57.895 5.55 0.45 40.26 4.02
74 75 1.443872 CAGTAGCGTGTGTCGGACC 60.444 63.158 5.55 0.00 40.26 4.46
75 76 2.087009 GCAGTAGCGTGTGTCGGAC 61.087 63.158 0.00 0.00 40.26 4.79
76 77 2.257371 GCAGTAGCGTGTGTCGGA 59.743 61.111 0.00 0.00 40.26 4.55
79 80 8.887171 AACTAAAAGTTAGCAGTAGCGTGTGTC 61.887 40.741 0.00 0.00 36.52 3.67
80 81 7.178385 AACTAAAAGTTAGCAGTAGCGTGTGT 61.178 38.462 0.00 0.00 36.52 3.72
81 82 5.176958 AACTAAAAGTTAGCAGTAGCGTGTG 59.823 40.000 0.00 0.00 36.52 3.82
82 83 5.176958 CAACTAAAAGTTAGCAGTAGCGTGT 59.823 40.000 0.00 0.00 40.48 4.49
83 84 5.176958 ACAACTAAAAGTTAGCAGTAGCGTG 59.823 40.000 0.00 0.00 40.48 5.34
84 85 5.295152 ACAACTAAAAGTTAGCAGTAGCGT 58.705 37.500 0.00 0.00 40.48 5.07
85 86 5.840940 ACAACTAAAAGTTAGCAGTAGCG 57.159 39.130 0.00 0.00 40.48 4.26
86 87 6.453922 CGCTACAACTAAAAGTTAGCAGTAGC 60.454 42.308 24.73 24.73 44.64 3.58
87 88 6.453922 GCGCTACAACTAAAAGTTAGCAGTAG 60.454 42.308 0.00 15.88 38.87 2.57
88 89 5.346822 GCGCTACAACTAAAAGTTAGCAGTA 59.653 40.000 0.00 2.94 38.87 2.74
89 90 4.151867 GCGCTACAACTAAAAGTTAGCAGT 59.848 41.667 0.00 2.09 38.87 4.40
90 91 4.435651 GGCGCTACAACTAAAAGTTAGCAG 60.436 45.833 7.64 7.94 38.87 4.24
91 92 3.434299 GGCGCTACAACTAAAAGTTAGCA 59.566 43.478 7.64 0.00 38.87 3.49
92 93 3.683340 AGGCGCTACAACTAAAAGTTAGC 59.317 43.478 7.64 5.02 36.03 3.09
93 94 5.857822 AAGGCGCTACAACTAAAAGTTAG 57.142 39.130 7.64 0.00 36.03 2.34
94 95 6.458210 AGTAAGGCGCTACAACTAAAAGTTA 58.542 36.000 7.64 0.00 36.03 2.24
95 96 5.303165 AGTAAGGCGCTACAACTAAAAGTT 58.697 37.500 7.64 0.00 39.39 2.66
96 97 4.891260 AGTAAGGCGCTACAACTAAAAGT 58.109 39.130 7.64 0.00 0.00 2.66
97 98 6.098017 ACTAGTAAGGCGCTACAACTAAAAG 58.902 40.000 7.64 3.78 0.00 2.27
98 99 6.029346 ACTAGTAAGGCGCTACAACTAAAA 57.971 37.500 7.64 0.00 0.00 1.52
99 100 5.649782 ACTAGTAAGGCGCTACAACTAAA 57.350 39.130 7.64 0.00 0.00 1.85
100 101 5.220931 GCTACTAGTAAGGCGCTACAACTAA 60.221 44.000 7.64 0.00 0.00 2.24
101 102 4.274459 GCTACTAGTAAGGCGCTACAACTA 59.726 45.833 7.64 9.52 0.00 2.24
102 103 3.066481 GCTACTAGTAAGGCGCTACAACT 59.934 47.826 7.64 8.83 0.00 3.16
103 104 3.370276 GCTACTAGTAAGGCGCTACAAC 58.630 50.000 7.64 0.58 0.00 3.32
104 105 2.032550 CGCTACTAGTAAGGCGCTACAA 59.967 50.000 19.57 0.00 41.08 2.41
105 106 1.600957 CGCTACTAGTAAGGCGCTACA 59.399 52.381 19.57 0.00 41.08 2.74
106 107 2.313004 CGCTACTAGTAAGGCGCTAC 57.687 55.000 19.57 2.47 41.08 3.58
111 112 2.461903 GAACAGCGCTACTAGTAAGGC 58.538 52.381 10.99 14.10 0.00 4.35
112 113 2.223758 GGGAACAGCGCTACTAGTAAGG 60.224 54.545 10.99 0.00 0.00 2.69
113 114 2.223758 GGGGAACAGCGCTACTAGTAAG 60.224 54.545 10.99 0.00 0.00 2.34
114 115 1.753073 GGGGAACAGCGCTACTAGTAA 59.247 52.381 10.99 0.00 0.00 2.24
115 116 1.396653 GGGGAACAGCGCTACTAGTA 58.603 55.000 10.99 1.89 0.00 1.82
116 117 1.664321 CGGGGAACAGCGCTACTAGT 61.664 60.000 10.99 0.00 0.00 2.57
117 118 1.065928 CGGGGAACAGCGCTACTAG 59.934 63.158 10.99 0.00 0.00 2.57
118 119 3.072486 GCGGGGAACAGCGCTACTA 62.072 63.158 10.99 0.00 42.91 1.82
119 120 4.452733 GCGGGGAACAGCGCTACT 62.453 66.667 10.99 0.00 42.91 2.57
126 127 2.298158 ATCAGTAGCGCGGGGAACAG 62.298 60.000 8.83 0.00 0.00 3.16
127 128 1.038681 TATCAGTAGCGCGGGGAACA 61.039 55.000 8.83 0.00 0.00 3.18
128 129 0.317479 ATATCAGTAGCGCGGGGAAC 59.683 55.000 8.83 0.00 0.00 3.62
129 130 0.317160 CATATCAGTAGCGCGGGGAA 59.683 55.000 8.83 0.00 0.00 3.97
130 131 1.964448 CATATCAGTAGCGCGGGGA 59.036 57.895 8.83 0.00 0.00 4.81
131 132 1.738099 GCATATCAGTAGCGCGGGG 60.738 63.158 8.83 0.00 0.00 5.73
132 133 0.319900 AAGCATATCAGTAGCGCGGG 60.320 55.000 8.83 0.00 0.00 6.13
133 134 1.502231 AAAGCATATCAGTAGCGCGG 58.498 50.000 8.83 0.00 0.00 6.46
134 135 4.026062 TGTTTAAAGCATATCAGTAGCGCG 60.026 41.667 0.00 0.00 0.00 6.86
135 136 5.198274 GTGTTTAAAGCATATCAGTAGCGC 58.802 41.667 0.00 0.00 0.00 5.92
136 137 6.185399 GTGTGTTTAAAGCATATCAGTAGCG 58.815 40.000 0.00 0.00 0.00 4.26
137 138 6.185399 CGTGTGTTTAAAGCATATCAGTAGC 58.815 40.000 0.00 0.00 0.00 3.58
138 139 6.036083 AGCGTGTGTTTAAAGCATATCAGTAG 59.964 38.462 0.00 0.00 0.00 2.57
139 140 5.872617 AGCGTGTGTTTAAAGCATATCAGTA 59.127 36.000 0.00 0.00 0.00 2.74
140 141 4.695455 AGCGTGTGTTTAAAGCATATCAGT 59.305 37.500 0.00 0.00 0.00 3.41
141 142 5.221891 AGCGTGTGTTTAAAGCATATCAG 57.778 39.130 0.00 0.00 0.00 2.90
142 143 5.872617 AGTAGCGTGTGTTTAAAGCATATCA 59.127 36.000 0.00 0.00 0.00 2.15
143 144 6.185399 CAGTAGCGTGTGTTTAAAGCATATC 58.815 40.000 0.00 0.00 0.00 1.63
144 145 5.447279 GCAGTAGCGTGTGTTTAAAGCATAT 60.447 40.000 0.00 0.00 0.00 1.78
145 146 4.142988 GCAGTAGCGTGTGTTTAAAGCATA 60.143 41.667 0.00 0.00 0.00 3.14
146 147 3.364964 GCAGTAGCGTGTGTTTAAAGCAT 60.365 43.478 0.00 0.00 0.00 3.79
147 148 2.032377 GCAGTAGCGTGTGTTTAAAGCA 60.032 45.455 0.00 0.00 0.00 3.91
148 149 2.571206 GCAGTAGCGTGTGTTTAAAGC 58.429 47.619 0.00 0.00 0.00 3.51
159 160 4.316903 GGGAAAACCCTAGCAGTAGCGT 62.317 54.545 0.00 0.00 39.65 5.07
160 161 1.742750 GGGAAAACCCTAGCAGTAGCG 60.743 57.143 0.00 0.00 39.65 4.26
161 162 1.560146 AGGGAAAACCCTAGCAGTAGC 59.440 52.381 5.97 0.00 41.63 3.58
179 180 1.833049 CCTCCCGCCCACTACTAGG 60.833 68.421 0.00 0.00 0.00 3.02
180 181 2.499827 GCCTCCCGCCCACTACTAG 61.500 68.421 0.00 0.00 0.00 2.57
181 182 2.443390 GCCTCCCGCCCACTACTA 60.443 66.667 0.00 0.00 0.00 1.82
194 195 4.625781 CTACTACGCCGCCGCCTC 62.626 72.222 0.00 0.00 38.22 4.70
198 199 2.712743 CTAGCACTACTACGCCGCCG 62.713 65.000 0.00 0.00 41.14 6.46
199 200 1.008767 CTAGCACTACTACGCCGCC 60.009 63.158 0.00 0.00 0.00 6.13
200 201 1.008767 CCTAGCACTACTACGCCGC 60.009 63.158 0.00 0.00 0.00 6.53
201 202 1.008767 GCCTAGCACTACTACGCCG 60.009 63.158 0.00 0.00 29.48 6.46
202 203 1.008767 CGCCTAGCACTACTACGCC 60.009 63.158 0.00 0.00 31.37 5.68
203 204 0.940126 TACGCCTAGCACTACTACGC 59.060 55.000 0.00 0.00 31.66 4.42
204 205 2.208431 ACTACGCCTAGCACTACTACG 58.792 52.381 0.00 0.00 0.00 3.51
205 206 5.938438 ATAACTACGCCTAGCACTACTAC 57.062 43.478 0.00 0.00 0.00 2.73
206 207 6.949352 AAATAACTACGCCTAGCACTACTA 57.051 37.500 0.00 0.00 0.00 1.82
207 208 5.848833 AAATAACTACGCCTAGCACTACT 57.151 39.130 0.00 0.00 0.00 2.57
208 209 6.898912 AAAAATAACTACGCCTAGCACTAC 57.101 37.500 0.00 0.00 0.00 2.73
258 259 8.332464 CGTTCAAACTAGGCGATTTTATTCATA 58.668 33.333 0.00 0.00 0.00 2.15
259 260 7.065324 TCGTTCAAACTAGGCGATTTTATTCAT 59.935 33.333 0.00 0.00 0.00 2.57
260 261 6.369340 TCGTTCAAACTAGGCGATTTTATTCA 59.631 34.615 0.00 0.00 0.00 2.57
261 262 6.768078 TCGTTCAAACTAGGCGATTTTATTC 58.232 36.000 0.00 0.00 0.00 1.75
262 263 6.730960 TCGTTCAAACTAGGCGATTTTATT 57.269 33.333 0.00 0.00 0.00 1.40
263 264 6.730960 TTCGTTCAAACTAGGCGATTTTAT 57.269 33.333 0.00 0.00 0.00 1.40
264 265 6.730960 ATTCGTTCAAACTAGGCGATTTTA 57.269 33.333 0.00 0.00 0.00 1.52
265 266 5.622770 ATTCGTTCAAACTAGGCGATTTT 57.377 34.783 0.00 0.00 0.00 1.82
266 267 5.622770 AATTCGTTCAAACTAGGCGATTT 57.377 34.783 0.00 0.00 0.00 2.17
267 268 5.048991 ACAAATTCGTTCAAACTAGGCGATT 60.049 36.000 0.00 0.00 0.00 3.34
268 269 4.454504 ACAAATTCGTTCAAACTAGGCGAT 59.545 37.500 0.00 0.00 0.00 4.58
269 270 3.810941 ACAAATTCGTTCAAACTAGGCGA 59.189 39.130 0.00 0.00 0.00 5.54
270 271 3.906008 CACAAATTCGTTCAAACTAGGCG 59.094 43.478 0.00 0.00 0.00 5.52
271 272 4.855531 ACACAAATTCGTTCAAACTAGGC 58.144 39.130 0.00 0.00 0.00 3.93
272 273 6.196353 CACAACACAAATTCGTTCAAACTAGG 59.804 38.462 0.00 0.00 0.00 3.02
273 274 6.745450 ACACAACACAAATTCGTTCAAACTAG 59.255 34.615 0.00 0.00 0.00 2.57
274 275 6.613233 ACACAACACAAATTCGTTCAAACTA 58.387 32.000 0.00 0.00 0.00 2.24
275 276 5.465935 ACACAACACAAATTCGTTCAAACT 58.534 33.333 0.00 0.00 0.00 2.66
276 277 5.755330 ACACAACACAAATTCGTTCAAAC 57.245 34.783 0.00 0.00 0.00 2.93
277 278 6.346919 CCAAACACAACACAAATTCGTTCAAA 60.347 34.615 0.00 0.00 0.00 2.69
278 279 5.119279 CCAAACACAACACAAATTCGTTCAA 59.881 36.000 0.00 0.00 0.00 2.69
279 280 4.623167 CCAAACACAACACAAATTCGTTCA 59.377 37.500 0.00 0.00 0.00 3.18
280 281 4.491763 GCCAAACACAACACAAATTCGTTC 60.492 41.667 0.00 0.00 0.00 3.95
281 282 3.369451 GCCAAACACAACACAAATTCGTT 59.631 39.130 0.00 0.00 0.00 3.85
282 283 2.926838 GCCAAACACAACACAAATTCGT 59.073 40.909 0.00 0.00 0.00 3.85
283 284 2.283884 GGCCAAACACAACACAAATTCG 59.716 45.455 0.00 0.00 0.00 3.34
284 285 2.283884 CGGCCAAACACAACACAAATTC 59.716 45.455 2.24 0.00 0.00 2.17
285 286 2.093973 TCGGCCAAACACAACACAAATT 60.094 40.909 2.24 0.00 0.00 1.82
286 287 1.478510 TCGGCCAAACACAACACAAAT 59.521 42.857 2.24 0.00 0.00 2.32
287 288 0.888619 TCGGCCAAACACAACACAAA 59.111 45.000 2.24 0.00 0.00 2.83
288 289 1.107114 ATCGGCCAAACACAACACAA 58.893 45.000 2.24 0.00 0.00 3.33
289 290 1.107114 AATCGGCCAAACACAACACA 58.893 45.000 2.24 0.00 0.00 3.72
290 291 2.217429 AAATCGGCCAAACACAACAC 57.783 45.000 2.24 0.00 0.00 3.32
291 292 2.428890 AGAAAATCGGCCAAACACAACA 59.571 40.909 2.24 0.00 0.00 3.33
292 293 3.092334 AGAAAATCGGCCAAACACAAC 57.908 42.857 2.24 0.00 0.00 3.32
293 294 3.810310 AAGAAAATCGGCCAAACACAA 57.190 38.095 2.24 0.00 0.00 3.33
294 295 3.810310 AAAGAAAATCGGCCAAACACA 57.190 38.095 2.24 0.00 0.00 3.72
295 296 4.568760 TGAAAAAGAAAATCGGCCAAACAC 59.431 37.500 2.24 0.00 0.00 3.32
296 297 4.759782 TGAAAAAGAAAATCGGCCAAACA 58.240 34.783 2.24 0.00 0.00 2.83
297 298 5.726729 TTGAAAAAGAAAATCGGCCAAAC 57.273 34.783 2.24 0.00 0.00 2.93
298 299 6.743575 TTTTGAAAAAGAAAATCGGCCAAA 57.256 29.167 2.24 0.00 0.00 3.28
299 300 6.743575 TTTTTGAAAAAGAAAATCGGCCAA 57.256 29.167 2.24 0.00 0.00 4.52
319 320 3.292159 GCCCCAGACGCCGTTTTT 61.292 61.111 0.00 0.00 0.00 1.94
320 321 4.265056 AGCCCCAGACGCCGTTTT 62.265 61.111 0.00 0.00 0.00 2.43
328 329 4.729918 CCAGCCACAGCCCCAGAC 62.730 72.222 0.00 0.00 41.25 3.51
329 330 4.980592 TCCAGCCACAGCCCCAGA 62.981 66.667 0.00 0.00 41.25 3.86
330 331 3.512154 TTTCCAGCCACAGCCCCAG 62.512 63.158 0.00 0.00 41.25 4.45
331 332 3.080158 TTTTCCAGCCACAGCCCCA 62.080 57.895 0.00 0.00 41.25 4.96
332 333 2.203625 TTTTCCAGCCACAGCCCC 60.204 61.111 0.00 0.00 41.25 5.80
333 334 2.574018 GGTTTTCCAGCCACAGCCC 61.574 63.158 0.00 0.00 41.25 5.19
334 335 2.919494 CGGTTTTCCAGCCACAGCC 61.919 63.158 0.00 0.00 41.25 4.85
335 336 1.244019 ATCGGTTTTCCAGCCACAGC 61.244 55.000 0.00 0.00 40.70 4.40
336 337 1.068333 CAATCGGTTTTCCAGCCACAG 60.068 52.381 0.00 0.00 40.70 3.66
337 338 0.958091 CAATCGGTTTTCCAGCCACA 59.042 50.000 0.00 0.00 40.70 4.17
338 339 0.388520 GCAATCGGTTTTCCAGCCAC 60.389 55.000 0.00 0.00 40.70 5.01
339 340 1.531739 GGCAATCGGTTTTCCAGCCA 61.532 55.000 2.02 0.00 40.54 4.75
340 341 1.215382 GGCAATCGGTTTTCCAGCC 59.785 57.895 0.00 0.00 40.70 4.85
341 342 1.215382 GGGCAATCGGTTTTCCAGC 59.785 57.895 0.00 0.00 40.70 4.85
342 343 1.506262 CGGGCAATCGGTTTTCCAG 59.494 57.895 0.00 0.00 40.70 3.86
343 344 2.631580 GCGGGCAATCGGTTTTCCA 61.632 57.895 0.00 0.00 40.70 3.53
344 345 2.180769 GCGGGCAATCGGTTTTCC 59.819 61.111 0.00 0.00 0.00 3.13
345 346 1.443702 GTGCGGGCAATCGGTTTTC 60.444 57.895 0.00 0.00 0.00 2.29
346 347 2.648454 GTGCGGGCAATCGGTTTT 59.352 55.556 0.00 0.00 0.00 2.43
347 348 3.370231 GGTGCGGGCAATCGGTTT 61.370 61.111 0.00 0.00 0.00 3.27
351 352 2.265073 AAATTCGGTGCGGGCAATCG 62.265 55.000 10.18 10.18 0.00 3.34
352 353 0.736053 TAAATTCGGTGCGGGCAATC 59.264 50.000 0.00 0.00 0.00 2.67
353 354 1.336755 GATAAATTCGGTGCGGGCAAT 59.663 47.619 0.00 0.00 0.00 3.56
354 355 0.736053 GATAAATTCGGTGCGGGCAA 59.264 50.000 0.00 0.00 0.00 4.52
355 356 1.433053 CGATAAATTCGGTGCGGGCA 61.433 55.000 0.00 0.00 44.28 5.36
356 357 1.278637 CGATAAATTCGGTGCGGGC 59.721 57.895 0.00 0.00 44.28 6.13
365 366 2.228103 GGGGGAAATCGGCGATAAATTC 59.772 50.000 24.28 21.37 0.00 2.17
366 367 2.235891 GGGGGAAATCGGCGATAAATT 58.764 47.619 24.28 14.05 0.00 1.82
367 368 1.144093 TGGGGGAAATCGGCGATAAAT 59.856 47.619 24.28 12.54 0.00 1.40
368 369 0.547075 TGGGGGAAATCGGCGATAAA 59.453 50.000 24.28 0.00 0.00 1.40
369 370 0.107831 CTGGGGGAAATCGGCGATAA 59.892 55.000 24.28 0.00 0.00 1.75
370 371 1.752198 CTGGGGGAAATCGGCGATA 59.248 57.895 24.28 4.32 0.00 2.92
371 372 2.510906 CTGGGGGAAATCGGCGAT 59.489 61.111 18.14 18.14 0.00 4.58
372 373 3.792736 CCTGGGGGAAATCGGCGA 61.793 66.667 13.87 13.87 33.58 5.54
375 376 4.875713 CCGCCTGGGGGAAATCGG 62.876 72.222 24.58 8.13 37.91 4.18
384 385 3.279875 GAAATAGCGCCGCCTGGG 61.280 66.667 4.98 0.00 39.58 4.45
385 386 2.051804 CTTGAAATAGCGCCGCCTGG 62.052 60.000 4.98 0.00 38.77 4.45
386 387 1.353103 CTTGAAATAGCGCCGCCTG 59.647 57.895 4.98 0.00 0.00 4.85
387 388 2.472909 GCTTGAAATAGCGCCGCCT 61.473 57.895 4.98 0.00 0.00 5.52
388 389 2.024729 GCTTGAAATAGCGCCGCC 59.975 61.111 4.98 0.00 0.00 6.13
389 390 2.024729 GGCTTGAAATAGCGCCGC 59.975 61.111 2.29 0.00 42.15 6.53
390 391 0.811616 AGAGGCTTGAAATAGCGCCG 60.812 55.000 2.29 0.00 46.85 6.46
391 392 0.659957 CAGAGGCTTGAAATAGCGCC 59.340 55.000 2.29 0.00 42.15 6.53
392 393 0.659957 CCAGAGGCTTGAAATAGCGC 59.340 55.000 0.00 0.00 42.15 5.92
393 394 1.303309 CCCAGAGGCTTGAAATAGCG 58.697 55.000 0.00 0.00 42.15 4.26
394 395 1.685148 CCCCAGAGGCTTGAAATAGC 58.315 55.000 0.00 0.00 40.48 2.97
395 396 2.355010 CCCCCAGAGGCTTGAAATAG 57.645 55.000 0.00 0.00 0.00 1.73
405 406 4.785453 GCTGTTCGCCCCCAGAGG 62.785 72.222 0.00 0.00 0.00 3.69
406 407 3.710722 AGCTGTTCGCCCCCAGAG 61.711 66.667 0.00 0.00 40.39 3.35
407 408 4.020617 CAGCTGTTCGCCCCCAGA 62.021 66.667 5.25 0.00 40.39 3.86
410 411 4.785453 CTCCAGCTGTTCGCCCCC 62.785 72.222 13.81 0.00 40.39 5.40
411 412 3.036429 ATCTCCAGCTGTTCGCCCC 62.036 63.158 13.81 0.00 40.39 5.80
412 413 1.817099 CATCTCCAGCTGTTCGCCC 60.817 63.158 13.81 0.00 40.39 6.13
413 414 2.467826 GCATCTCCAGCTGTTCGCC 61.468 63.158 13.81 0.00 40.39 5.54
414 415 1.427592 GAGCATCTCCAGCTGTTCGC 61.428 60.000 13.81 7.78 43.58 4.70
415 416 2.675519 GAGCATCTCCAGCTGTTCG 58.324 57.895 13.81 0.00 43.58 3.95
427 428 2.164422 GGGGCTGTTTTGTTAGAGCATC 59.836 50.000 0.00 0.00 32.83 3.91
428 429 2.171003 GGGGCTGTTTTGTTAGAGCAT 58.829 47.619 0.00 0.00 32.83 3.79
429 430 1.616159 GGGGCTGTTTTGTTAGAGCA 58.384 50.000 0.00 0.00 32.83 4.26
430 431 0.521735 CGGGGCTGTTTTGTTAGAGC 59.478 55.000 0.00 0.00 0.00 4.09
431 432 1.165270 CCGGGGCTGTTTTGTTAGAG 58.835 55.000 0.00 0.00 0.00 2.43
432 433 0.766131 TCCGGGGCTGTTTTGTTAGA 59.234 50.000 0.00 0.00 0.00 2.10
433 434 0.879090 GTCCGGGGCTGTTTTGTTAG 59.121 55.000 0.00 0.00 0.00 2.34
434 435 0.183014 TGTCCGGGGCTGTTTTGTTA 59.817 50.000 0.00 0.00 0.00 2.41
435 436 1.076632 TGTCCGGGGCTGTTTTGTT 60.077 52.632 0.00 0.00 0.00 2.83
436 437 1.528309 CTGTCCGGGGCTGTTTTGT 60.528 57.895 0.00 0.00 0.00 2.83
437 438 0.821711 TTCTGTCCGGGGCTGTTTTG 60.822 55.000 0.00 0.00 0.00 2.44
438 439 0.106419 TTTCTGTCCGGGGCTGTTTT 60.106 50.000 0.00 0.00 0.00 2.43
439 440 0.106419 TTTTCTGTCCGGGGCTGTTT 60.106 50.000 0.00 0.00 0.00 2.83
440 441 0.106419 TTTTTCTGTCCGGGGCTGTT 60.106 50.000 0.00 0.00 0.00 3.16
441 442 1.534697 TTTTTCTGTCCGGGGCTGT 59.465 52.632 0.00 0.00 0.00 4.40
442 443 4.492604 TTTTTCTGTCCGGGGCTG 57.507 55.556 0.00 0.00 0.00 4.85
459 460 0.244994 TGCAACGTGGCTGTGTTTTT 59.755 45.000 17.46 0.00 34.04 1.94
460 461 0.457681 GTGCAACGTGGCTGTGTTTT 60.458 50.000 17.46 0.00 34.04 2.43
461 462 1.138671 GTGCAACGTGGCTGTGTTT 59.861 52.632 17.46 0.00 34.04 2.83
462 463 1.992233 CTGTGCAACGTGGCTGTGTT 61.992 55.000 17.46 0.00 42.39 3.32
463 464 2.437537 TGTGCAACGTGGCTGTGT 60.438 55.556 17.46 0.00 42.39 3.72
464 465 2.328989 CTGTGCAACGTGGCTGTG 59.671 61.111 17.46 1.82 42.39 3.66
465 466 2.124736 ACTGTGCAACGTGGCTGT 60.125 55.556 17.46 9.55 42.39 4.40
466 467 1.157257 TACACTGTGCAACGTGGCTG 61.157 55.000 17.46 8.46 42.64 4.85
467 468 0.880278 CTACACTGTGCAACGTGGCT 60.880 55.000 17.46 0.00 42.64 4.75
468 469 1.157870 ACTACACTGTGCAACGTGGC 61.158 55.000 8.35 8.35 42.64 5.01
469 470 1.790623 GTACTACACTGTGCAACGTGG 59.209 52.381 17.73 5.09 42.64 4.94
470 471 2.217847 GTGTACTACACTGTGCAACGTG 59.782 50.000 7.90 13.38 45.27 4.49
471 472 2.466846 GTGTACTACACTGTGCAACGT 58.533 47.619 7.90 2.71 45.27 3.99
472 473 1.450533 CGTGTACTACACTGTGCAACG 59.549 52.381 15.76 5.55 46.46 4.10
473 474 2.470257 GTCGTGTACTACACTGTGCAAC 59.530 50.000 15.76 1.89 46.46 4.17
474 475 2.099427 TGTCGTGTACTACACTGTGCAA 59.901 45.455 15.76 0.00 46.46 4.08
475 476 1.677052 TGTCGTGTACTACACTGTGCA 59.323 47.619 15.76 7.51 46.46 4.57
476 477 2.410785 TGTCGTGTACTACACTGTGC 57.589 50.000 15.76 5.46 46.46 4.57
477 478 4.542735 TGATTGTCGTGTACTACACTGTG 58.457 43.478 15.76 6.19 46.46 3.66
478 479 4.795268 CTGATTGTCGTGTACTACACTGT 58.205 43.478 15.76 0.00 46.46 3.55
479 480 3.608506 GCTGATTGTCGTGTACTACACTG 59.391 47.826 15.76 10.15 46.46 3.66
480 481 3.254903 TGCTGATTGTCGTGTACTACACT 59.745 43.478 15.76 0.00 46.46 3.55
481 482 3.571571 TGCTGATTGTCGTGTACTACAC 58.428 45.455 9.04 9.04 45.26 2.90
482 483 3.926821 TGCTGATTGTCGTGTACTACA 57.073 42.857 0.00 0.00 0.00 2.74
483 484 5.585500 TTTTGCTGATTGTCGTGTACTAC 57.415 39.130 0.00 0.00 0.00 2.73
484 485 4.151689 GCTTTTGCTGATTGTCGTGTACTA 59.848 41.667 0.00 0.00 43.35 1.82
550 553 0.392193 AGAGCATTGCCCAGACGAAG 60.392 55.000 4.70 0.00 0.00 3.79
614 622 2.883730 CGCACCATACGTGTCCCG 60.884 66.667 0.00 0.00 44.97 5.14
615 623 1.375013 AACGCACCATACGTGTCCC 60.375 57.895 0.00 0.00 44.30 4.46
616 624 0.947180 ACAACGCACCATACGTGTCC 60.947 55.000 0.00 0.00 44.30 4.02
617 625 0.162933 CACAACGCACCATACGTGTC 59.837 55.000 0.00 0.00 44.30 3.67
618 626 1.225376 CCACAACGCACCATACGTGT 61.225 55.000 0.00 0.00 44.30 4.49
619 627 1.495509 CCACAACGCACCATACGTG 59.504 57.895 0.00 0.00 44.30 4.49
621 629 3.034370 GCCCACAACGCACCATACG 62.034 63.158 0.00 0.00 0.00 3.06
622 630 2.874751 GCCCACAACGCACCATAC 59.125 61.111 0.00 0.00 0.00 2.39
623 631 2.744318 CGCCCACAACGCACCATA 60.744 61.111 0.00 0.00 0.00 2.74
624 632 4.947147 ACGCCCACAACGCACCAT 62.947 61.111 0.00 0.00 0.00 3.55
627 635 4.605967 CACACGCCCACAACGCAC 62.606 66.667 0.00 0.00 0.00 5.34
629 637 4.605967 CACACACGCCCACAACGC 62.606 66.667 0.00 0.00 0.00 4.84
630 638 1.225376 ATACACACACGCCCACAACG 61.225 55.000 0.00 0.00 0.00 4.10
631 639 0.515564 GATACACACACGCCCACAAC 59.484 55.000 0.00 0.00 0.00 3.32
632 640 0.394938 AGATACACACACGCCCACAA 59.605 50.000 0.00 0.00 0.00 3.33
633 641 0.394938 AAGATACACACACGCCCACA 59.605 50.000 0.00 0.00 0.00 4.17
634 642 1.519408 AAAGATACACACACGCCCAC 58.481 50.000 0.00 0.00 0.00 4.61
635 643 2.264005 AAAAGATACACACACGCCCA 57.736 45.000 0.00 0.00 0.00 5.36
654 662 3.984838 AAAGCCATCTTTGCGCAAA 57.015 42.105 31.75 31.75 40.77 3.68
675 683 0.313672 TGTCAAATCGTGGCAAAGGC 59.686 50.000 0.00 0.00 39.47 4.35
742 757 0.462225 CTCTCTCTCGGGTGCTACGA 60.462 60.000 0.00 0.00 38.79 3.43
750 765 2.036475 CTCTCTCTCTCTCTCTCTCGGG 59.964 59.091 0.00 0.00 0.00 5.14
752 767 2.959030 TCCTCTCTCTCTCTCTCTCTCG 59.041 54.545 0.00 0.00 0.00 4.04
780 841 3.387716 GGGCCACCCACCAAATTC 58.612 61.111 4.39 0.00 44.65 2.17
816 877 2.902846 CGGGTGGCCACGTTTTCA 60.903 61.111 29.08 0.00 0.00 2.69
878 1119 0.393808 GAATTACGAAGCTGCCCCCA 60.394 55.000 0.00 0.00 0.00 4.96
904 1145 4.783764 AACAGCAAAGTAGGGTTTATGC 57.216 40.909 0.00 0.00 0.00 3.14
953 1199 0.394565 GCTGGCTATCGGGAAGTGAT 59.605 55.000 0.00 0.00 0.00 3.06
954 1200 1.686325 GGCTGGCTATCGGGAAGTGA 61.686 60.000 0.00 0.00 0.00 3.41
969 1215 3.365265 GGGCGAAGTTGGTGGCTG 61.365 66.667 0.00 0.00 0.00 4.85
1151 1418 1.682451 TTACGGATCCCTCTTGGCGG 61.682 60.000 6.06 0.00 0.00 6.13
1267 1539 3.569701 TCCCATCAAAAGTCAGCTCAAAC 59.430 43.478 0.00 0.00 0.00 2.93
1379 1651 0.246635 TGTAGCCTCTCCTTGCGAAC 59.753 55.000 0.00 0.00 0.00 3.95
1385 1657 2.428890 CTCGATGTTGTAGCCTCTCCTT 59.571 50.000 0.00 0.00 0.00 3.36
1460 1732 1.457831 GAGCACCCTATCCGTCCCT 60.458 63.158 0.00 0.00 0.00 4.20
1526 1798 1.238439 AAATGTGGAACGGCAGACTG 58.762 50.000 0.00 0.00 42.39 3.51
1567 1839 8.314751 CGAATGATTTACTCCTCCTAACCATAT 58.685 37.037 0.00 0.00 0.00 1.78
1568 1840 7.256190 CCGAATGATTTACTCCTCCTAACCATA 60.256 40.741 0.00 0.00 0.00 2.74
1569 1841 6.464465 CCGAATGATTTACTCCTCCTAACCAT 60.464 42.308 0.00 0.00 0.00 3.55
1570 1842 5.163343 CCGAATGATTTACTCCTCCTAACCA 60.163 44.000 0.00 0.00 0.00 3.67
1571 1843 5.298347 CCGAATGATTTACTCCTCCTAACC 58.702 45.833 0.00 0.00 0.00 2.85
1572 1844 4.750598 GCCGAATGATTTACTCCTCCTAAC 59.249 45.833 0.00 0.00 0.00 2.34
1595 1875 3.731652 TGAAACCAAGTGGCATGAAAG 57.268 42.857 0.00 0.00 39.32 2.62
1620 1900 2.039084 AGCCGGTGAAATCTTCTGAAGT 59.961 45.455 16.43 2.45 0.00 3.01
1637 1917 3.426525 GCTGACAGAAAATTTTGAAGCCG 59.573 43.478 8.47 0.00 0.00 5.52
1639 1919 5.527033 AGAGCTGACAGAAAATTTTGAAGC 58.473 37.500 8.47 10.30 0.00 3.86
1647 1927 8.428063 AGTATATTGCTAGAGCTGACAGAAAAT 58.572 33.333 6.65 0.00 42.66 1.82
1654 1934 7.209471 ACTGTAGTATATTGCTAGAGCTGAC 57.791 40.000 2.72 0.00 42.66 3.51
1690 2053 4.398044 CGGCTAAGGTGTTTATGACCAAAT 59.602 41.667 0.00 0.00 35.76 2.32
1691 2054 3.754323 CGGCTAAGGTGTTTATGACCAAA 59.246 43.478 0.00 0.00 35.76 3.28
1694 2074 2.981898 ACGGCTAAGGTGTTTATGACC 58.018 47.619 0.00 0.00 0.00 4.02
1730 2110 8.750515 TGAAGCTGTGATTATAATGGAATTGA 57.249 30.769 1.78 0.00 36.99 2.57
2109 3446 8.409358 ACAAACTGCTTCTTACTTGGATTATT 57.591 30.769 0.00 0.00 0.00 1.40
2123 3460 7.995463 TTTTACCAAACATACAAACTGCTTC 57.005 32.000 0.00 0.00 0.00 3.86
2124 3461 8.956533 ATTTTTACCAAACATACAAACTGCTT 57.043 26.923 0.00 0.00 0.00 3.91
2257 3595 1.271817 TGTATGTGCACAATGGCAGGA 60.272 47.619 25.72 0.00 45.96 3.86
2258 3596 1.133598 CTGTATGTGCACAATGGCAGG 59.866 52.381 25.72 6.84 45.96 4.85
2500 3839 8.538701 ACCTGCAATTTATTGGATTCAAATACA 58.461 29.630 4.76 0.00 37.49 2.29
2530 3869 4.023291 CCTGAGGCTCCTTAGATAGATCC 58.977 52.174 12.86 0.00 32.20 3.36
2608 3947 8.478066 AGATACAAGTCAACAGCATATCTTACA 58.522 33.333 0.00 0.00 0.00 2.41
2683 4022 8.485976 AGAAGAAACAGCACATTAAGAGTATC 57.514 34.615 0.00 0.00 0.00 2.24
2824 4163 7.201696 CGGCATAAAACAAGGAACACATATACT 60.202 37.037 0.00 0.00 0.00 2.12
2866 4213 8.893727 GTTACCTACAGCATTGATCAAATAAGT 58.106 33.333 13.09 11.44 0.00 2.24
3037 4384 3.691575 TGAAGAAAATATGCCCGTGGAA 58.308 40.909 0.00 0.00 0.00 3.53
3062 4409 7.184067 AGAACGTTGGGAGATAAGAATTAGT 57.816 36.000 5.00 0.00 31.76 2.24
3082 4429 3.437049 ACGCCTCAAAGCAATCTAAGAAC 59.563 43.478 0.00 0.00 0.00 3.01
3268 4615 8.082242 AGAAATAGGCAACAAACATTGAGTTAC 58.918 33.333 0.00 0.00 40.26 2.50
3275 4622 7.500141 ACAAGAAGAAATAGGCAACAAACATT 58.500 30.769 0.00 0.00 41.41 2.71
3288 4635 7.993183 ACAGGACAAGAAGAACAAGAAGAAATA 59.007 33.333 0.00 0.00 0.00 1.40
3294 4641 6.411376 TGTAACAGGACAAGAAGAACAAGAA 58.589 36.000 0.00 0.00 0.00 2.52
3317 4664 2.098443 ACGCCACCTTTTACAACAGTTG 59.902 45.455 12.03 12.03 0.00 3.16
3321 4668 2.335316 AGACGCCACCTTTTACAACA 57.665 45.000 0.00 0.00 0.00 3.33
3325 4672 1.066358 AGCCTAGACGCCACCTTTTAC 60.066 52.381 0.00 0.00 0.00 2.01
3339 4686 6.610425 TCCTAAAAGGTACTCCTAAAGCCTAG 59.390 42.308 0.00 0.00 44.35 3.02
3396 4743 2.633967 AGAGGCATCTCTCAAGCATAGG 59.366 50.000 0.00 0.00 46.79 2.57
3549 4897 2.905075 TCACTTATGGAACGATGGCTG 58.095 47.619 0.00 0.00 0.00 4.85
3590 4938 9.777297 TTATTTCCTATAACCGGGTATACAAAC 57.223 33.333 15.48 0.00 0.00 2.93
3648 4996 1.059584 TGCAGGTCTCCCCAGTTTCA 61.060 55.000 0.00 0.00 34.66 2.69
3693 5041 4.854399 TCGGTTGCACATTTAAAAGTCTG 58.146 39.130 0.00 0.00 0.00 3.51
3718 5079 9.976511 CTGGAAATATTCTACTCGGTTATGTTA 57.023 33.333 0.00 0.00 0.00 2.41
3727 5088 6.806751 TGGAAGTCTGGAAATATTCTACTCG 58.193 40.000 0.00 0.00 0.00 4.18
3838 5199 1.670811 GGATAAACATCACCCTGCACG 59.329 52.381 0.00 0.00 0.00 5.34
3988 5349 3.452264 AGTGCATGCAGTCTATAGGTCAA 59.548 43.478 23.41 0.00 0.00 3.18
4100 5461 3.619979 GCTTAAAGCTACAGAGGCCTTCA 60.620 47.826 6.77 0.00 38.45 3.02
4133 5494 8.471361 ACAGCACATATTATCATGTCGATTAG 57.529 34.615 0.00 0.00 37.02 1.73
4332 5694 1.851304 CCTGGCCCATACACAACAAT 58.149 50.000 0.00 0.00 0.00 2.71
4463 5825 1.528129 AAGCTGCTGCACTAACTTCC 58.472 50.000 18.42 0.00 42.74 3.46
4516 5878 8.928733 ACAAATGATTGATCTAACAAATTGCAC 58.071 29.630 12.42 0.00 38.94 4.57
4565 5927 1.549203 GGATGGTCACATGTTTGGCT 58.451 50.000 0.00 0.00 37.47 4.75
4568 5930 1.820519 CCTGGGATGGTCACATGTTTG 59.179 52.381 0.00 0.00 37.47 2.93
4656 6018 0.825840 GTATCTCCCTCCGAGCAGCT 60.826 60.000 0.00 0.00 38.62 4.24
4827 6287 7.794041 TCCTGTTTCTAGTTTACTACCAAACA 58.206 34.615 15.20 15.20 40.22 2.83
4845 6452 4.895668 ATGCCAACAATTCATCCTGTTT 57.104 36.364 0.00 0.00 33.51 2.83
4879 6569 4.668576 ATAGTTGCAGTCATGTCAAACG 57.331 40.909 0.00 0.00 0.00 3.60
4928 6618 7.036996 TGCATGAGTTTTTGTCAGTGATTAA 57.963 32.000 0.00 0.00 0.00 1.40
4929 6619 6.631971 TGCATGAGTTTTTGTCAGTGATTA 57.368 33.333 0.00 0.00 0.00 1.75
4930 6620 5.518848 TGCATGAGTTTTTGTCAGTGATT 57.481 34.783 0.00 0.00 0.00 2.57
5051 6889 4.402155 ACAATGAAGAGGCAAAAACAGTCA 59.598 37.500 0.00 0.00 0.00 3.41
5054 6892 5.350633 TCAACAATGAAGAGGCAAAAACAG 58.649 37.500 0.00 0.00 30.99 3.16
5069 6907 5.009911 TCCCACTCACAAGAAATCAACAATG 59.990 40.000 0.00 0.00 0.00 2.82
5070 6908 5.139727 TCCCACTCACAAGAAATCAACAAT 58.860 37.500 0.00 0.00 0.00 2.71
5113 6951 9.271828 AGCAAAACGGAAGAAAAATATCAAAAT 57.728 25.926 0.00 0.00 0.00 1.82
5118 6956 7.084486 AGACAGCAAAACGGAAGAAAAATATC 58.916 34.615 0.00 0.00 0.00 1.63
5185 7024 9.685276 AACTTAGATTCCATCACATAACAATCA 57.315 29.630 0.00 0.00 0.00 2.57
5232 7071 4.881273 TGGTAAGAATGCGTGCTCAAATAT 59.119 37.500 0.00 0.00 0.00 1.28
5284 7123 4.199432 ACTCCAATTGACTGCTGAGTAG 57.801 45.455 7.12 0.00 31.70 2.57
5332 7435 5.871524 TGCAGACAAAGCTTAACATCTAGAG 59.128 40.000 0.00 0.00 0.00 2.43
5676 7782 3.748048 CGGGTATAAATGCATGTCCAGAG 59.252 47.826 0.00 0.00 0.00 3.35
5697 7803 5.513376 ACAACATTAGCACATCATATTGCG 58.487 37.500 0.00 0.00 43.87 4.85
5754 7860 4.789012 AAAGCATTCTGTTACATGTGGG 57.211 40.909 9.11 0.00 0.00 4.61
5791 7897 7.337436 TCGAGTTAGTTTTCAGGGAAAAAGAAA 59.663 33.333 5.77 0.00 42.09 2.52
5800 7906 3.600388 AGCATCGAGTTAGTTTTCAGGG 58.400 45.455 0.00 0.00 0.00 4.45
5814 7924 0.456221 GACGGAGAGGAAAGCATCGA 59.544 55.000 0.00 0.00 0.00 3.59
5815 7925 0.867753 CGACGGAGAGGAAAGCATCG 60.868 60.000 0.00 0.00 0.00 3.84
5920 8030 7.039923 ACGACTTCTTATTACAGTGGAAGAGAA 60.040 37.037 13.30 13.30 37.43 2.87
5945 8055 2.101209 CTTGGGTCGTCGTTGCACAC 62.101 60.000 0.00 0.00 0.00 3.82
5975 8085 0.250640 CTGCTCAGCTCAACCAACCT 60.251 55.000 0.00 0.00 0.00 3.50
6009 8121 0.884704 ACAGCCGCACGAAAAGATGT 60.885 50.000 0.00 0.00 0.00 3.06
6012 8124 1.092921 AACACAGCCGCACGAAAAGA 61.093 50.000 0.00 0.00 0.00 2.52
6018 8130 2.047151 AACAAGAACACAGCCGCACG 62.047 55.000 0.00 0.00 0.00 5.34
6030 8142 7.060421 AGGAAACAAGTCATCCTAAACAAGAA 58.940 34.615 5.90 0.00 41.74 2.52
6078 8190 6.602803 TGCATCTACCAAGAGCAATTTATTCA 59.397 34.615 0.00 0.00 34.82 2.57
6123 8235 1.160137 ATTCTGCTTCTCGGTGCAAC 58.840 50.000 0.00 0.00 38.81 4.17
6133 8245 5.363939 AGCATGTACTCCTTATTCTGCTTC 58.636 41.667 0.00 0.00 35.31 3.86
6146 8258 4.180057 CAGAGACAAGGAAGCATGTACTC 58.820 47.826 0.00 0.00 0.00 2.59
6147 8259 3.618507 GCAGAGACAAGGAAGCATGTACT 60.619 47.826 0.00 0.00 0.00 2.73
6148 8260 2.675348 GCAGAGACAAGGAAGCATGTAC 59.325 50.000 0.00 0.00 0.00 2.90
6156 8268 2.555325 CAAGCAATGCAGAGACAAGGAA 59.445 45.455 8.35 0.00 0.00 3.36
6181 8293 3.412386 AGTCCCAACTGACAATTACAGC 58.588 45.455 10.46 0.00 38.74 4.40
6188 8301 4.081642 GCAGATACTAGTCCCAACTGACAA 60.082 45.833 0.00 0.00 37.73 3.18
6199 8312 7.206687 AGAGTGCATTTTAGCAGATACTAGTC 58.793 38.462 0.00 0.00 46.69 2.59
6202 8315 7.555965 TGAAGAGTGCATTTTAGCAGATACTA 58.444 34.615 0.00 0.00 46.69 1.82
6203 8316 6.409704 TGAAGAGTGCATTTTAGCAGATACT 58.590 36.000 0.00 0.00 46.69 2.12
6204 8317 6.668541 TGAAGAGTGCATTTTAGCAGATAC 57.331 37.500 0.00 0.00 46.69 2.24
6205 8318 6.183360 GCTTGAAGAGTGCATTTTAGCAGATA 60.183 38.462 0.00 0.00 46.69 1.98
6263 8376 0.739462 CAACAAGGTAGATCGCCGCA 60.739 55.000 4.15 0.00 0.00 5.69
6268 8381 1.860950 CGGCATCAACAAGGTAGATCG 59.139 52.381 0.00 0.00 0.00 3.69
6291 8404 0.459759 GACCGCCTTCTTACTTCCGG 60.460 60.000 0.00 0.00 41.31 5.14
6295 8408 4.592426 GCGACCGCCTTCTTACTT 57.408 55.556 2.55 0.00 34.56 2.24
6339 8452 5.357742 ACAAACAGGCTCTGGAAAATTTT 57.642 34.783 2.28 2.28 35.51 1.82
6407 8520 1.880340 GCCAACATCTCGAGCTCCG 60.880 63.158 7.81 3.57 40.25 4.63
6434 8547 2.873288 GACCGCCGAGTTCGTACT 59.127 61.111 0.00 0.00 37.74 2.73
6485 8598 0.749818 TTGTTCTCCTTTGCCGTGCA 60.750 50.000 0.00 0.00 36.47 4.57
6487 8600 1.264288 GTCTTGTTCTCCTTTGCCGTG 59.736 52.381 0.00 0.00 0.00 4.94
6490 8603 2.294512 CCAAGTCTTGTTCTCCTTTGCC 59.705 50.000 11.61 0.00 0.00 4.52
6631 8770 4.382040 CCAGTCAGCTCCTCGAAATCTTTA 60.382 45.833 0.00 0.00 0.00 1.85
6769 8908 4.574674 ATCCTGTACAAGGCAGAATTCA 57.425 40.909 8.44 0.00 46.92 2.57
6772 8911 5.193679 GGTTTATCCTGTACAAGGCAGAAT 58.806 41.667 0.00 0.00 46.92 2.40
6802 8941 2.426522 CTGGCAAGATCAGGAAACGAA 58.573 47.619 0.00 0.00 0.00 3.85
6821 8960 6.812160 GCTATATAGGTACTGCAAATAACGCT 59.188 38.462 11.72 0.00 41.52 5.07
6822 8961 6.812160 AGCTATATAGGTACTGCAAATAACGC 59.188 38.462 12.74 0.00 41.52 4.84
6823 8962 8.648097 CAAGCTATATAGGTACTGCAAATAACG 58.352 37.037 14.61 0.00 41.52 3.18
6824 8963 9.706691 TCAAGCTATATAGGTACTGCAAATAAC 57.293 33.333 14.61 0.00 41.52 1.89
6825 8964 9.929180 CTCAAGCTATATAGGTACTGCAAATAA 57.071 33.333 14.61 0.00 41.52 1.40
6826 8965 8.035394 GCTCAAGCTATATAGGTACTGCAAATA 58.965 37.037 14.61 0.00 37.39 1.40
6850 8989 2.523325 TCTTCTCCTACAGCTCAGCT 57.477 50.000 0.00 0.00 40.77 4.24
6862 9005 5.762711 GCATCCCTAATTCTCTTTCTTCTCC 59.237 44.000 0.00 0.00 0.00 3.71
6868 9011 5.008514 GCTTCTGCATCCCTAATTCTCTTTC 59.991 44.000 0.00 0.00 39.41 2.62
6885 9028 1.135460 GCAAGATCCAAGTGCTTCTGC 60.135 52.381 0.00 0.00 35.36 4.26
6886 9029 1.471684 GGCAAGATCCAAGTGCTTCTG 59.528 52.381 7.85 0.00 38.36 3.02
6887 9030 1.353694 AGGCAAGATCCAAGTGCTTCT 59.646 47.619 7.85 0.00 38.36 2.85
6888 9031 1.831580 AGGCAAGATCCAAGTGCTTC 58.168 50.000 7.85 0.00 38.36 3.86
6889 9032 2.165998 GAAGGCAAGATCCAAGTGCTT 58.834 47.619 7.85 0.00 38.36 3.91
6890 9033 1.615384 GGAAGGCAAGATCCAAGTGCT 60.615 52.381 7.85 0.00 38.36 4.40
6891 9034 0.813821 GGAAGGCAAGATCCAAGTGC 59.186 55.000 0.00 0.00 35.71 4.40
6892 9035 2.089980 CTGGAAGGCAAGATCCAAGTG 58.910 52.381 0.00 0.00 44.77 3.16
6893 9036 1.707427 ACTGGAAGGCAAGATCCAAGT 59.293 47.619 0.00 0.00 44.77 3.16
6894 9037 2.490903 CAACTGGAAGGCAAGATCCAAG 59.509 50.000 0.00 0.00 44.77 3.61
6895 9038 2.108075 TCAACTGGAAGGCAAGATCCAA 59.892 45.455 0.00 0.00 44.77 3.53
6896 9039 1.704628 TCAACTGGAAGGCAAGATCCA 59.295 47.619 0.00 0.00 43.32 3.41
6897 9040 2.087646 GTCAACTGGAAGGCAAGATCC 58.912 52.381 0.00 0.00 39.30 3.36
6898 9041 1.734465 CGTCAACTGGAAGGCAAGATC 59.266 52.381 0.00 0.00 39.30 2.75
6899 9042 1.072331 ACGTCAACTGGAAGGCAAGAT 59.928 47.619 0.00 0.00 39.30 2.40
6900 9043 0.468226 ACGTCAACTGGAAGGCAAGA 59.532 50.000 0.00 0.00 39.30 3.02
6901 9044 0.868406 GACGTCAACTGGAAGGCAAG 59.132 55.000 11.55 0.00 39.30 4.01
6902 9045 0.534203 GGACGTCAACTGGAAGGCAA 60.534 55.000 18.91 0.00 39.30 4.52
6903 9046 1.070786 GGACGTCAACTGGAAGGCA 59.929 57.895 18.91 0.00 39.30 4.75
6904 9047 0.321653 ATGGACGTCAACTGGAAGGC 60.322 55.000 18.91 0.00 39.30 4.35
6905 9048 3.198068 CATATGGACGTCAACTGGAAGG 58.802 50.000 18.91 0.00 39.30 3.46
6906 9049 3.861840 ACATATGGACGTCAACTGGAAG 58.138 45.455 18.91 1.63 42.29 3.46
6907 9050 3.973206 ACATATGGACGTCAACTGGAA 57.027 42.857 18.91 0.00 0.00 3.53
6908 9051 3.369052 GGAACATATGGACGTCAACTGGA 60.369 47.826 18.91 0.00 0.00 3.86
6909 9052 2.936498 GGAACATATGGACGTCAACTGG 59.064 50.000 18.91 6.07 0.00 4.00
6910 9053 2.936498 GGGAACATATGGACGTCAACTG 59.064 50.000 18.91 10.18 0.00 3.16
6911 9054 2.838202 AGGGAACATATGGACGTCAACT 59.162 45.455 18.91 3.39 0.00 3.16
6912 9055 3.195661 GAGGGAACATATGGACGTCAAC 58.804 50.000 18.91 0.81 0.00 3.18
6913 9056 2.835156 TGAGGGAACATATGGACGTCAA 59.165 45.455 18.91 6.46 0.00 3.18
6914 9057 2.462723 TGAGGGAACATATGGACGTCA 58.537 47.619 18.91 10.48 0.00 4.35
6915 9058 3.536956 TTGAGGGAACATATGGACGTC 57.463 47.619 7.13 7.13 0.00 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.